3NMVB

Crystal structure of pyrabactin-bound abscisic acid receptor pyl2 mutant a93f in complex with type 2c protein phosphatase abi2
Total Genus 92
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
92
sequence length
306
structure length
280
Chain Sequence
CVPLYGVTSICGRRPEMEDSVSTIPRFLQNGFNPHLSAHFFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSEIETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIRWNGARVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARKRILLWHKKNEGKDPAAMSAAEYLSKMALQKGSKDNISVVVVDLKGI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Protein binding
molecule keywords Abscisic acid receptor PYL2
publication title Identification and mechanism of ABA receptor antagonism.
pubmed doi rcsb
source organism Arabidopsis thaliana
total genus 92
structure length 280
sequence length 306
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2010-06-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00481 PP2C Protein phosphatase 2C
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.40.10 Alpha Beta 4-Layer Sandwich Phosphatase 2c; domain 1 PPM-type phosphatase domain 3nmvB00
1TXOA 3MQ3A 3N3CA 3W42A 2J82A 3FXKA 5D2UA 4YZHA 4DA1A 3RT0A 3EQ2A 2CM1A 2PK0A 3JRQA 3T9QA 3D8KA 4RAGA 3KE6A 2P8EA 3W43A 4JNDA 3F79A 4OICB 5F1MA 4LGAB 2PNQA 3UJLB 2JFRA 2ISNA 4RA2A 3ZT9A 1A6QA 3FXLA 4LGBB 3KB3B 3NMVB 3QN1B 3UJKA 3KDJB 3W44A 3T91A 3FXJA 5JO2B 2J4OA 4RAFA 2I0OA 2IRMA 3W41A 3FXMA 3ZVUB 2JFSA 2POPA 3RNRA 2POMA 2Y09A 4LA7B 3ES2A 3NMTB 3FXOA 3NMNB 5JO1B 4N0GA 4YZGA 3PU9A 2IQ1A 3W40A 2XZVA 2JFTA 3W45A 4DS8B 2V06A 4LG5B 5ITIA 3UJGB 2I44A 2J86A 4WVOB
chains in the Genus database with same CATH superfamily
4IIKA 1TXOA 3MQ3A 3N3CA 3W42A 2J82A 3FXKA 5D2UA 4YZHA 4DA1A 3RT0A 3EQ2A 2CM1A 2PK0A 3JRQA 3T9QA 3D8KA 4RAGA 3KE6A 2P8EA 3W43A 4JNDA 3F79A 4IIPA 4OICB 5F1MA 4LGAB 2PNQA 3UJLB 2JFRA 2ISNA 4RA2A 3ZT9A 1A6QA 3FXLA 4LGBB 3KB3B 3NMVB 3QN1B 3UJKA 3KDJB 3W44A 3T91A 3FXJA 5JO2B 2J4OA 4RAFA 2I0OA 2IRMA 3W41A 3FXMA 3ZVUB 2JFSA 2POPA 3RNRA 2POMA 2Y09A 4LA7B 3ES2A 3NMTB 3FXOA 3NMNB 5JO1B 4N0GA 4YZGA 3PU9A 2IQ1A 3W40A 2XZVA 2JFTA 3W45A 4DS8B 2V06A 4LG5B 5ITIA 3UJGB 2I44A 2J86A 4WVOB
chains in the Genus database with same CATH topology
1TXOA 3MQ3A 3N3CA 3W42A 2J82A 3FXKA 5D2UA 4YZHA 4DA1A 3RT0A 3EQ2A 2CM1A 2PK0A 3JRQA 3T9QA 3D8KA 4RAGA 3KE6A 2P8EA 3W43A 4JNDA 3F79A 4OICB 5F1MA 4LGAB 2PNQA 3UJLB 2JFRA 2ISNA 4RA2A 3ZT9A 1A6QA 3FXLA 4LGBB 3KB3B 3NMVB 3QN1B 3UJKA 3KDJB 3W44A 3T91A 3FXJA 5JO2B 2J4OA 4RAFA 2I0OA 2IRMA 3W41A 3FXMA 3ZVUB 2JFSA 2POPA 3RNRA 2POMA 2Y09A 4LA7B 3ES2A 3NMTB 3FXOA 3NMNB 5JO1B 4N0GA 4YZGA 3PU9A 2IQ1A 3W40A 2XZVA 2JFTA 3W45A 4DS8B 2V06A 4LG5B 5ITIA 3UJGB 2I44A 2J86A 4WVOB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TXO A;  3MQ3 A;  3N3C A;  3W42 A;  2J82 A;  3FXK A;  5D2U A;  4YZH A;  4DA1 A;  3RT0 A;  3EQ2 A;  2CM1 A;  2PK0 A;  3JRQ A;  3T9Q A;  3D8K A;  4RAG A;  3KE6 A;  2P8E A;  3W43 A;  4JND A;  3F79 A;  4OIC B;  5F1M A;  4LGA B;  2PNQ A;  3UJL B;  2JFR A;  2ISN A;  4RA2 A;  3ZT9 A;  1A6Q A;  3FXL A;  4LGB B;  3KB3 B;  3NMV B;  3QN1 B;  3UJK A;  3KDJ B;  3W44 A;  3T91 A;  3FXJ A;  5JO2 B;  2J4O A;  4RAF A;  2I0O A;  2IRM A;  3W41 A;  3FXM A;  3ZVU B;  2JFS A;  2POP A;  3RNR A;  2POM A;  2Y09 A;  4LA7 B;  3ES2 A;  3NMT B;  3FXO A;  3NMN B;  5JO1 B;  4N0G A;  4YZG A;  3PU9 A;  2IQ1 A;  3W40 A;  2XZV A;  2JFT A;  3W45 A;  4DS8 B;  2V06 A;  4LG5 B;  5ITI A;  3UJG B;  2I44 A;  2J86 A;  4WVO B; 
#chains in the Genus database with same CATH topology
 4IIK A;  1TXO A;  3MQ3 A;  3N3C A;  3W42 A;  2J82 A;  3FXK A;  5D2U A;  4YZH A;  4DA1 A;  3RT0 A;  3EQ2 A;  2CM1 A;  2PK0 A;  3JRQ A;  3T9Q A;  3D8K A;  4RAG A;  3KE6 A;  2P8E A;  3W43 A;  4JND A;  3F79 A;  4IIP A;  4OIC B;  5F1M A;  4LGA B;  2PNQ A;  3UJL B;  2JFR A;  2ISN A;  4RA2 A;  3ZT9 A;  1A6Q A;  3FXL A;  4LGB B;  3KB3 B;  3NMV B;  3QN1 B;  3UJK A;  3KDJ B;  3W44 A;  3T91 A;  3FXJ A;  5JO2 B;  2J4O A;  4RAF A;  2I0O A;  2IRM A;  3W41 A;  3FXM A;  3ZVU B;  2JFS A;  2POP A;  3RNR A;  2POM A;  2Y09 A;  4LA7 B;  3ES2 A;  3NMT B;  3FXO A;  3NMN B;  5JO1 B;  4N0G A;  4YZG A;  3PU9 A;  2IQ1 A;  3W40 A;  2XZV A;  2JFT A;  3W45 A;  4DS8 B;  2V06 A;  4LG5 B;  5ITI A;  3UJG B;  2I44 A;  2J86 A;  4WVO B; 
#chains in the Genus database with same CATH homology
 1TXO A;  3MQ3 A;  3N3C A;  3W42 A;  2J82 A;  3FXK A;  5D2U A;  4YZH A;  4DA1 A;  3RT0 A;  3EQ2 A;  2CM1 A;  2PK0 A;  3JRQ A;  3T9Q A;  3D8K A;  4RAG A;  3KE6 A;  2P8E A;  3W43 A;  4JND A;  3F79 A;  4OIC B;  5F1M A;  4LGA B;  2PNQ A;  3UJL B;  2JFR A;  2ISN A;  4RA2 A;  3ZT9 A;  1A6Q A;  3FXL A;  4LGB B;  3KB3 B;  3NMV B;  3QN1 B;  3UJK A;  3KDJ B;  3W44 A;  3T91 A;  3FXJ A;  5JO2 B;  2J4O A;  4RAF A;  2I0O A;  2IRM A;  3W41 A;  3FXM A;  3ZVU B;  2JFS A;  2POP A;  3RNR A;  2POM A;  2Y09 A;  4LA7 B;  3ES2 A;  3NMT B;  3FXO A;  3NMN B;  5JO1 B;  4N0G A;  4YZG A;  3PU9 A;  2IQ1 A;  3W40 A;  2XZV A;  2JFT A;  3W45 A;  4DS8 B;  2V06 A;  4LG5 B;  5ITI A;  3UJG B;  2I44 A;  2J86 A;  4WVO B; 
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