3OG4A

The crystal structure of human interferon lambda 1 complexed with its high affinity receptor in space group p21212
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
148
structure length
140
Chain Sequence
SLSPQELASFKKARDALEESLKLKNWSCSSPVFPGNWDLRLLQVRERPVALEAELALTLKVLEAAAGPALEDVLDQPLHTLHHILSQLQACIQPRGRLHHWLHRLQEAPKKESAGCLEASVTFNLFRLLTRDLKYVADGN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Cytokine/cytokine receptor
molecule keywords Interleukin-29
publication title Crystal structure of the complex of human interferon-lambda1 with its high affinity receptor interferon-lambdaR1.
pubmed doi rcsb
source organism Homo sapiens
total genus 48
structure length 140
sequence length 148
ec nomenclature
pdb deposition date 2010-08-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF15177 IL28A Interleukin-28A
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1250.60 Mainly Alpha Up-down Bundle Growth Hormone; Chain: A; Growth Hormone; Chain: A; 3og4A00
3OG4A 3OG6A 3HHCA
chains in the Genus database with same CATH superfamily
2B8UA 4XNJA 1A22A 4NN6A 4OAAA 3EW3A 4XNIA 1EVSA 5D72A 1RFBA 2VUMD 4APSA 1J7VL 1ITFA 1ALUA 4NI7A 1QVNA 3FKID 2INTA 1P9MB 4A3GD 2R7ZD 4I77Z 4J05A 1HIJA 2KZ1A 5IYDD 3BPNA 1HWHA 4TPGA 5EQGA 1CYLA 4ZWCA 4A93D 3Q1SI 1AU1A 4RS1A 1M4RA 1Y1WD 5D59A 3PIVA 2CYKA 2L3YA 5IYBD 4U4VA 4X51A 2B8ZA 4EXPA 2B91A 1PVHB 4A3ID 4WRLB 1CNT1 3DUHC 3O7QA 4NN5A 3OG4A 1BCNA 2D9QA 2JA6D 1Y14A 2D48A 4GBZA 2ERJD 4YQXA 1M49A 5IYCD 5GXBA 3NCCA 2Z3QA 4QIQA 4TPJA 5KNHI 1GNCA 3PO2D 5A2OA 4D2DA 1ILKA 3HOVD 3DGCL 3UEZE 4A3LD 1IARA 3NCFA 4NKQC 2JA5D 2V8NA 4Q65A 3QAZA 4ZS7A 5LQBA 3MZGA 1IL6A 4IKXA 1FYHA 1Y6KL 1F6FA 3BPLA 1HZIA 1RCBA 1EMRA 1PW6A 1LKIA 4JREA 5L6YC 3OG6A 2O26A 3HOUD 4A3BD 1EKUA 3WCYI 5EQIA 1HULA 4NEJA 1VLKA 2HYMB 3QT2C 1GA3A 1ITMA 2C35A 4NI9A 1YKBA 4YDYI 4ZWBA 4ZYRA 4GRWA 4DKEA 4IKZA 2Q7NB 1PV6A 2OQPA 1IRLA 1Z92A 1M48A 5A2NA 2B5IA 1AX8A 4BBRD 4A3JD 3O7PA 4DKCA 4GBYA 4YUEC 5C7XA 1BP3A 4FA8E 4JA3A 3HHRA 1B5LA 1F45B 3NCEA 4PYPA 3HMXB 4LEPA 2JA7D 5C4XD 3UX9A 1BGCA 2JA8D 4U4TA 1M4BA 3AYHA 2PSMA 3LB6B 4NN7A 2LMSA 1NBPA 4JR9A 4DKFA 4BY1D 5D22A 4OH3A 5E4EA 5D6KA 1IJZA 2R93D 4J4LC 2B63D 4GC0A 3N0PA 4PS4A 3L5XA 1M47A 5D71A 1ITIA 3G6DA 2Z3RA 1BGDA 4IU8A 3VA2A 4Z5RD 2Q14A 1Z7CA 1ITLA 2ILKA 3DI3A 3S9DA 1A7MA 3INKC 1BBNA 1CSGA 3UF5A 1PW4A 1WU3I 4W6VA 1CN4C 4CNIC 4BBSD 1EXZA 1Y1VD 1HIKA 3D87A 4DOHA 2CFPA 1I1RB 4LDSA 4IU9A 1CD9A 4LRLA 4YBQA 3TGXB 1KF9A 4A3ED 1PGRA 3H0GD 3H3VE 3LB6A 1PY2A 4GS7A 3I4MD 3BPOA 4U4WA 5C3ED 2Q98A 4A3CD 2GMFA 4ZF7A 2B8YA 4IKWA 4D2BA 3PIWA 1WCMD 4A3DD 5C44D 3DI2A 5EQHA 3SE4B 1BGEA 4BXXD 3QB1A 1RW5A 3NCBA 2XQBA 3BESL 3QWRB 4DKDA 1HWGA 4TPHA 5FUCA 1D9CA 3HHCA 3PO3D 5IP7D 5C65A 3IRHA 2H24A 3NPZA 5D28B 1LK3A 4IKVA 3HOZD 3HOYD 5IP9D 2CFQA 2L3OA 1LQSL 1V7NV 1RHGA 3EJJA 5D70A 4UVMA 4YB9D 1ETEA 1V7MV 1M4CA 5FHXA 4YPGC 1EERA 4IKYA 3D85C 3I4ND 1JLIA 3G9VB 2E9WC 1HGUA 4BY7D 2LAGA 1HUWA 4A3FD 1SCFA 1D9GA 4ZW9A 2XUTA 1Y6ML 3WDOA 3L5WI 4EXNA 3D48P 1Y6NL 3UF2A 4D2CA 3SE3B 3B5KA 3N06A 2B8XA 5FLMD 3QB7A 2B90A 5TS9A 2O27A 1BUYA 4O6KA 1N1FA 4O9HA 5D58A 1IK0A 1AXIA 2IL6A 3DLQI 4A3MD 2Y5YA 4A3KD 4MHLA 2O6IA 1PV7A 3HOWD 1M4AA 1FG9A 2R92D 1INRA 4NEMA 3OQ3A 3HOXD
chains in the Genus database with same CATH topology
2B8UA 3AYHA 3SE4B 2PSMA 1A22A 1BGEA 1FYHA 4NN6A 3LB6B 4BXXD 3EW3A 3QB1A 4NN7A 1RW5A 2LMSA 1NBPA 1Y6KL 3NCBA 2XQBA 1F6FA 4DKFA 3BESL 3QWRB 4DKDA 1EVSA 4BY1D 3BPLA 5D72A 1RFBA 1HWGA 1HZIA 5D22A 2VUMD 1RCBA 5FUCA 5E4EA 1EMRA 1J7VL 1ITFA 1ALUA 1IJZA 1D9CA 1PW6A 1LKIA 3HHCA 3PO3D 2R93D 4J4LC 2B63D 4NI7A 5IP7D 3IRHA 1QVNA 3N0PA 4PS4A 5L6YC 3L5XA 2H24A 3NPZA 2O26A 3OG6A 3HOUD 1M47A 3FKID 5D28B 5D71A 4A3BD 1ITIA 3G6DA 1EKUA 1LK3A 3WCYI 1IL6A 2INTA 1P9MB 2Z3RA 3HOZD 3HOYD 1HULA 4NEJA 4A3GD 1BGDA 2R7ZD 5IP9D 3VA2A 4Z5RD 1VLKA 2L3OA 4I77Z 1LQSL 2HYMB 2Q14A 3QT2C 1V7NV 1GA3A 1RHGA 1ITMA 2C35A 3EJJA 3MZGA 5D70A 1HIJA 1Z7CA 4NI9A 2KZ1A 1ETEA 1V7MV 1ITLA 2ILKA 3DI3A 1M4CA 5FHXA 1YKBA 3S9DA 5IYDD 4YDYI 1A7MA 3INKC 4YPGC 1BBNA 3BPNA 1EERA 1HWHA 3D85C 1CSGA 3I4ND 3UF5A 1CYLA 1JLIA 4GRWA 4DKEA 3G9VB 4A93D 2E9WC 1WU3I 1HGUA 2Q7NB 4BY7D 3Q1SI 1AU1A 2OQPA 4RS1A 1M4RA 2LAGA 5C44D 1IRLA 1HUWA 1M48A 1Z92A 4A3FD 1SCFA 1Y1WD 3PIVA 1CN4C 2CYKA 1D9GA 2L3YA 4CNIC 5IYBD 4BBSD 1EXZA 4X51A 2B5IA 1Y1VD 1Y6ML 2B8ZA 1AX8A 1HIKA 3D87A 4BBRD 4DOHA 4EXPA 2B91A 1I1RB 1PVHB 4EXNA 3L5WI 4WRLB 4A3ID 3D48P 1CNT1 3DUHC 4A3JD 4NN5A 1Y6NL 3UF2A 1CD9A 3OG4A 2D9QA 4LRLA 1BCNA 3TGXB 3SE3B 1KF9A 4A3ED 2JA6D 3B5KA 3N06A 1Y14A 2D48A 4DKCA 2B8XA 4YUEC 5FLMD 5C7XA 3QB7A 1PGRA 3H0GD 2B90A 2ERJD 3H3VE 4YQXA 3LB6A 1PY2A 4GS7A 5TS9A 1M49A 1BP3A 2O27A 4FA8E 1BUYA 3I4MD 3BPOA 5IYCD 3HHRA 4O6KA 1B5LA 1F45B 3NCEA 1N1FA 5C3ED 3NCCA 2Q98A 2Z3QA 4O9HA 1IK0A 5KNHI 4A3CD 2GMFA 1AXIA 2IL6A 4ZF7A 2B8YA 3DLQI 3HMXB 4A3MD 1GNCA 3PO2D 1ILKA 2JA7D 3DGCL 3UEZE 3HOVD 1IARA 4A3LD 5C4XD 3NCFA 3PIWA 4MHLA 4A3KD 3UX9A 1BGCA 2O6IA 4NKQC 2JA5D 2JA8D 1WCMD 1M4AA 3HOWD 4A3DD 1FG9A 2R92D 1INRA 4NEMA 3QAZA 4ZS7A 5LQBA 3DI2A 3OQ3A 3HOXD 1M4BA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3OG4 A;  3OG6 A;  3HHC A; 
#chains in the Genus database with same CATH topology
 2B8U A;  4XNJ A;  1A22 A;  4NN6 A;  4OAA A;  3EW3 A;  4XNI A;  1EVS A;  5D72 A;  1RFB A;  2VUM D;  4APS A;  1J7V L;  1ITF A;  1ALU A;  4NI7 A;  1QVN A;  3FKI D;  2INT A;  1P9M B;  4A3G D;  2R7Z D;  4I77 Z;  4J05 A;  1HIJ A;  2KZ1 A;  5IYD D;  3BPN A;  1HWH A;  4TPG A;  5EQG A;  1CYL A;  4ZWC A;  4A93 D;  3Q1S I;  1AU1 A;  4RS1 A;  1M4R A;  1Y1W D;  5D59 A;  3PIV A;  2CYK A;  2L3Y A;  5IYB D;  4U4V A;  4X51 A;  2B8Z A;  4EXP A;  2B91 A;  1PVH B;  4A3I D;  4WRL B;  1CNT 1;  3DUH C;  3O7Q A;  4NN5 A;  3OG4 A;  1BCN A;  2D9Q A;  2JA6 D;  1Y14 A;  2D48 A;  4GBZ A;  2ERJ D;  4YQX A;  1M49 A;  5IYC D;  5GXB A;  3NCC A;  2Z3Q A;  4QIQ A;  4TPJ A;  5KNH I;  1GNC A;  3PO2 D;  5A2O A;  4D2D A;  1ILK A;  3HOV D;  3DGC L;  3UEZ E;  4A3L D;  1IAR A;  3NCF A;  4NKQ C;  2JA5 D;  2V8N A;  4Q65 A;  3QAZ A;  4ZS7 A;  5LQB A;  3MZG A;  1IL6 A;  4IKX A;  1FYH A;  1Y6K L;  1F6F A;  3BPL A;  1HZI A;  1RCB A;  1EMR A;  1PW6 A;  1LKI A;  4JRE A;  5L6Y C;  3OG6 A;  2O26 A;  3HOU D;  4A3B D;  1EKU A;  3WCY I;  5EQI A;  1HUL A;  4NEJ A;  1VLK A;  2HYM B;  3QT2 C;  1GA3 A;  1ITM A;  2C35 A;  4NI9 A;  1YKB A;  4YDY I;  4ZWB A;  4ZYR A;  4GRW A;  4DKE A;  4IKZ A;  2Q7N B;  1PV6 A;  2OQP A;  1IRL A;  1Z92 A;  1M48 A;  5A2N A;  2B5I A;  1AX8 A;  4BBR D;  4A3J D;  3O7P A;  4DKC A;  4GBY A;  4YUE C;  5C7X A;  1BP3 A;  4FA8 E;  4JA3 A;  3HHR A;  1B5L A;  1F45 B;  3NCE A;  4PYP A;  3HMX B;  4LEP A;  2JA7 D;  5C4X D;  3UX9 A;  1BGC A;  2JA8 D;  4U4T A;  1M4B A;  3AYH A;  2PSM A;  3LB6 B;  4NN7 A;  2LMS A;  1NBP A;  4JR9 A;  4DKF A;  4BY1 D;  5D22 A;  4OH3 A;  5E4E A;  5D6K A;  1IJZ A;  2R93 D;  4J4L C;  2B63 D;  4GC0 A;  3N0P A;  4PS4 A;  3L5X A;  1M47 A;  5D71 A;  1ITI A;  3G6D A;  2Z3R A;  1BGD A;  4IU8 A;  3VA2 A;  4Z5R D;  2Q14 A;  1Z7C A;  1ITL A;  2ILK A;  3DI3 A;  3S9D A;  1A7M A;  3INK C;  1BBN A;  1CSG A;  3UF5 A;  1PW4 A;  1WU3 I;  4W6V A;  1CN4 C;  4CNI C;  4BBS D;  1EXZ A;  1Y1V D;  1HIK A;  3D87 A;  4DOH A;  2CFP A;  1I1R B;  4LDS A;  4IU9 A;  1CD9 A;  4LRL A;  4YBQ A;  3TGX B;  1KF9 A;  4A3E D;  1PGR A;  3H0G D;  3H3V E;  3LB6 A;  1PY2 A;  4GS7 A;  3I4M D;  3BPO A;  4U4W A;  5C3E D;  2Q98 A;  4A3C D;  2GMF A;  4ZF7 A;  2B8Y A;  4IKW A;  4D2B A;  3PIW A;  1WCM D;  4A3D D;  5C44 D;  3DI2 A;  5EQH A;  3SE4 B;  1BGE A;  4BXX D;  3QB1 A;  1RW5 A;  3NCB A;  2XQB A;  3BES L;  3QWR B;  4DKD A;  1HWG A;  4TPH A;  5FUC A;  1D9C A;  3HHC A;  3PO3 D;  5IP7 D;  5C65 A;  3IRH A;  2H24 A;  3NPZ A;  5D28 B;  1LK3 A;  4IKV A;  3HOZ D;  3HOY D;  5IP9 D;  2CFQ A;  2L3O A;  1LQS L;  1V7N V;  1RHG A;  3EJJ A;  5D70 A;  4UVM A;  4YB9 D;  1ETE A;  1V7M V;  1M4C A;  5FHX A;  4YPG C;  1EER A;  4IKY A;  3D85 C;  3I4N D;  1JLI A;  3G9V B;  2E9W C;  1HGU A;  4BY7 D;  2LAG A;  1HUW A;  4A3F D;  1SCF A;  1D9G A;  4ZW9 A;  2XUT A;  1Y6M L;  3WDO A;  3L5W I;  4EXN A;  3D48 P;  1Y6N L;  3UF2 A;  4D2C A;  3SE3 B;  3B5K A;  3N06 A;  2B8X A;  5FLM D;  3QB7 A;  2B90 A;  5TS9 A;  2O27 A;  1BUY A;  4O6K A;  1N1F A;  4O9H A;  5D58 A;  1IK0 A;  1AXI A;  2IL6 A;  3DLQ I;  4A3M D;  2Y5Y A;  4A3K D;  4MHL A;  2O6I A;  1PV7 A;  3HOW D;  1M4A A;  1FG9 A;  2R92 D;  1INR A;  4NEM A;  3OQ3 A;  3HOX D; 
#chains in the Genus database with same CATH homology
 2B8U A;  3AYH A;  3SE4 B;  2PSM A;  1A22 A;  1BGE A;  1FYH A;  4NN6 A;  3LB6 B;  4BXX D;  3EW3 A;  3QB1 A;  4NN7 A;  1RW5 A;  2LMS A;  1NBP A;  1Y6K L;  3NCB A;  2XQB A;  1F6F A;  4DKF A;  3BES L;  3QWR B;  4DKD A;  1EVS A;  4BY1 D;  3BPL A;  5D72 A;  1RFB A;  1HWG A;  1HZI A;  5D22 A;  2VUM D;  1RCB A;  5FUC A;  5E4E A;  1EMR A;  1J7V L;  1ITF A;  1ALU A;  1IJZ A;  1D9C A;  1PW6 A;  1LKI A;  3HHC A;  3PO3 D;  2R93 D;  4J4L C;  2B63 D;  4NI7 A;  5IP7 D;  3IRH A;  1QVN A;  3N0P A;  4PS4 A;  5L6Y C;  3L5X A;  2H24 A;  3NPZ A;  2O26 A;  3OG6 A;  3HOU D;  1M47 A;  3FKI D;  5D28 B;  5D71 A;  4A3B D;  1ITI A;  3G6D A;  1EKU A;  1LK3 A;  3WCY I;  1IL6 A;  2INT A;  1P9M B;  2Z3R A;  3HOZ D;  3HOY D;  1HUL A;  4NEJ A;  4A3G D;  1BGD A;  2R7Z D;  5IP9 D;  3VA2 A;  4Z5R D;  1VLK A;  2L3O A;  4I77 Z;  1LQS L;  2HYM B;  2Q14 A;  3QT2 C;  1V7N V;  1GA3 A;  1RHG A;  1ITM A;  2C35 A;  3EJJ A;  3MZG A;  5D70 A;  1HIJ A;  1Z7C A;  4NI9 A;  2KZ1 A;  1ETE A;  1V7M V;  1ITL A;  2ILK A;  3DI3 A;  1M4C A;  5FHX A;  1YKB A;  3S9D A;  5IYD D;  4YDY I;  1A7M A;  3INK C;  4YPG C;  1BBN A;  3BPN A;  1EER A;  1HWH A;  3D85 C;  1CSG A;  3I4N D;  3UF5 A;  1CYL A;  1JLI A;  4GRW A;  4DKE A;  3G9V B;  4A93 D;  2E9W C;  1WU3 I;  1HGU A;  2Q7N B;  4BY7 D;  3Q1S I;  1AU1 A;  2OQP A;  4RS1 A;  1M4R A;  2LAG A;  5C44 D;  1IRL A;  1HUW A;  1M48 A;  1Z92 A;  4A3F D;  1SCF A;  1Y1W D;  3PIV A;  1CN4 C;  2CYK A;  1D9G A;  2L3Y A;  4CNI C;  5IYB D;  4BBS D;  1EXZ A;  4X51 A;  2B5I A;  1Y1V D;  1Y6M L;  2B8Z A;  1AX8 A;  1HIK A;  3D87 A;  4BBR D;  4DOH A;  4EXP A;  2B91 A;  1I1R B;  1PVH B;  4EXN A;  3L5W I;  4WRL B;  4A3I D;  3D48 P;  1CNT 1;  3DUH C;  4A3J D;  4NN5 A;  1Y6N L;  3UF2 A;  1CD9 A;  3OG4 A;  2D9Q A;  4LRL A;  1BCN A;  3TGX B;  3SE3 B;  1KF9 A;  4A3E D;  2JA6 D;  3B5K A;  3N06 A;  1Y14 A;  2D48 A;  4DKC A;  2B8X A;  4YUE C;  5FLM D;  5C7X A;  3QB7 A;  1PGR A;  3H0G D;  2B90 A;  2ERJ D;  3H3V E;  4YQX A;  3LB6 A;  1PY2 A;  4GS7 A;  5TS9 A;  1M49 A;  1BP3 A;  2O27 A;  4FA8 E;  1BUY A;  3I4M D;  3BPO A;  5IYC D;  3HHR A;  4O6K A;  1B5L A;  1F45 B;  3NCE A;  1N1F A;  5C3E D;  3NCC A;  2Q98 A;  2Z3Q A;  4O9H A;  1IK0 A;  5KNH I;  4A3C D;  2GMF A;  1AXI A;  2IL6 A;  4ZF7 A;  2B8Y A;  3DLQ I;  3HMX B;  4A3M D;  1GNC A;  3PO2 D;  1ILK A;  2JA7 D;  3DGC L;  3UEZ E;  3HOV D;  1IAR A;  4A3L D;  5C4X D;  3NCF A;  3PIW A;  4MHL A;  4A3K D;  3UX9 A;  1BGC A;  2O6I A;  4NKQ C;  2JA5 D;  2JA8 D;  1WCM D;  1M4A A;  3HOW D;  4A3D D;  1FG9 A;  2R92 D;  1INR A;  4NEM A;  3QAZ A;  4ZS7 A;  5LQB A;  3DI2 A;  3OQ3 A;  3HOX D;  1M4B A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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