3OVOA

Refined x-ray crystal structures of the reactive site modified ovomucoid inhibitor third domains from silver pheasant (omsvp3(asterisk)) and from japanese quail (omjpq3(asterisk))
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
56
structure length
56
Chain Sequence
LAAVSVDCSEYPKPACPKDYRPVCGSDNKTYSNKCNFCNAVVESNGTLTLNHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Proteinase inhibitor (kazal)
molecule keywords OVOMUCOID THIRD DOMAIN CLEAVED RDI
publication title Refined X-ray crystal structures of the reactive site modified ovomucoid inhibitor third domains from silver pheasant (OMSVP3*) and from Japanese quail (OMJPQ3*).
pubmed doi rcsb
source organism Coturnix japonica
total genus 12
structure length 56
sequence length 56
ec nomenclature
pdb deposition date 1991-05-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 3ovoA00
2SGPI 1TGSI 1IW4A 2LEOA 1CT4I 1OYVI 2N52A 1PPFI 1SGYI 2N17A 1TBRR 1DS2I 2KMOA 1CT2I 2SGFI 2KMRA 2XRCA 1IY6A 2QQCA 2P6AC 2KMPA 2NU3I 1R0RI 2NU0I 2KMQA 5JHWC 1CSOI 2OVOA 1SGNI 3B4VC 1PCEA 1CHOI 2WCYA 1SGDI 1CT0I 2SGEI 1M8BA 1UUCA 5DAEA 2JZMA 2SGDI 2V53A 1H0ZA 1DS3I 2QQDA 2SGQI 1IY5A 3SGQI 1BUSA 1OMTA 1OVOA 1LR7A 1SGPI 1SGEI 1MT1A 1FYBA 2NU2I 2GKRI 1Z7KB 1LR9A 1M8CA 2F3CI 1SGRI 1TIHA 2ARPF 1SGQI 2M5XA 1YU6C 2GKVA 3TJQA 4SGBI 3SGBI 1BMOA 1HPTA 1TBQR 2N71A 1CGJI 1PJUA 3OVOA 2JXDA 1CGII 1HJAI 1YTPA 3SEKC 2JYYA 2NU4I 1N13A 3QTLD 1AN1I 1Y1BA 2GKTI 1NUBA 2BUSA 2ERWA 4HGUA 2KCXA 1HDLA 1TURA 1OMUA 1UVFA 3HH2C 2B0UC 1TUSA 1UVGA 2NU1I 1KMAA 1Y1CA 4GI3C 4OVOA 1LR8A 1CE3A
chains in the Genus database with same CATH superfamily
3TO6A 3UEYA 2SGPI 1TGSI 5FUWA 1Q9BA 1WKXA 3UFFA 3OXLA 3OXFA 3UOEA 1TBNA 1IW4A 2J9RA 4UXJA 3TOAA 3RU0A 1KBFA 2LEOA 1CT4I 1OYVI 2N52A 1PPFI 1SGYI 3FC3A 2N17A 1TBRR 5FUXA 4MPIA 1DS2I 2KMOA 4L9MA 4JCVE 2ELIA 1P9ZA 1CT2I 2SGFI 2N1AB 1S20A 2KMRA 2XRCA 3VE5A 1XBTA 2LUYA 1IY6A 1HEVA 2QQCA 2YUUA 2P6AC 9WGAA 2E5RA 2KMPA 3TOBA 2NU3I 3VDPA 1R0RI 2ODDA 2NU0I 1P9GA 2KMQA 2ROWA 4E1PA 5JHWC 5J8FA 5J8CA 2ENZA 3GOXA 5EX0A 1CSOI 2OVOA 1SGNI 5CCLA 3B4VC 1PCEA 1CHOI 2JW6A 2PQ8A 2WCYA 4UXIA 1SGDI 1MJ9A 1PTRA 1CT0I 1TOTA 1W4RA 1M8BA 2SGEI 4E1RA 3CXLA 1ULMA 2CJSC 1UUCA 5DAEA 5E3RA 1TBOA 1FY7A 2JZMA 2SGDI 2A20A 2DB6A 2WGCA 2V53A 3R5CA 1H0ZA 1DS3I 3KY9A 2QQDA 3E2IA 3MEKA 2SGQI 1PTQA 1IY5A 3SGQI 1BUSA 1OMTA 3OXGA 1OVOA 2GIVA 5FUVA 1W3SA 2V1CA 1ULKA 2CWFA 1LR7A 2QQ0A 1X4SA 2FNFX 3TO9A 2QPOA 1SGPI 1V1HA 3UGIA 5FUYA 1SGEI 1X74A 2RC4A 2DKVA 1MT1A 1FARA 1KBEA 7WGAA 1FYBA 1WGCA 2NU2I 3FSXA 2GKRI 1Z7KB 1LR9A 1MJBA 1M8CA 3QWPA 2F3CI 2VRWB 1SGRI 4WP4A 1TIHA 1V1IA 1MJAA 1XX6A 2DIPA 3PDNA 5E3PA 2ARPF 1SGQI 2CWHA 2K9HA 2OZUA 2M5XA 2V1CC 2X52A 3QAHA 3UEJA 3VDUA 2OD1A 1YU6C 1UHAA 2B8TA 2CWGA 2GKVA 3TJQA 4SGBI 4UXHA 3SGBI 1BMOA 1HPTA 5CCMA 1TBQR 2N71A 1CGJI 2QQEA 3R5AA 5E3QA 2LB7A 1PJUA 3FSYA 3D00A 2UZ3A 1NXUA 3OVOA 2JXDA 1WGTA 1K7UA 1CGII 3OL0A 4FKDA 5EX3A 1HJAI 1YTPA 3SEKC 1RFHA 2JYYA 2ORVA 2NU4I 1N13A 2X3TA 1WTJA 3QTLD 4B6DA 1U5KA 1AN1I 2GVIA 1Y1BA 2JA1A 2UVOA 3UGDA 2GKTI 1NUBA 2L8EA 2BUSA 2ERWA 2ORWA 1Y8FA 2W0TA 4HGUA 2ENNA 2WVJA 2KCXA 2E73A 3BJIA 1HDLA 1TURA 1K7TA 1OMUA 1K7VA 1R79A 2J87A 1UVFA 2OU2A 3R5BA 2Y0MA 3E59A 3TO7A 1Z2IA 5HI7A 3UGLA 1ULNA 1FAQA 3HH2C 2B0UC 1TUSA 2RIJA 1UVGA 2NU1I 1KMAA 1Y1CA 4GI3C 1VDDA 2YQPA 2L7XA 3R5DA 1XA6A 4OVOA 5HQ8A 4AMLA 4A24A 1LR8A 1CE3A 4DNCA
chains in the Genus database with same CATH topology
3UEYA 2SGPI 1TGSI 5FUWA 3UFFA 3OXLA 3OXFA 1TBNA 1IW4A 2J9RA 4UXJA 3RU0A 1KBFA 2LEOA 1CT4I 1OYVI 2N52A 1PPFI 1SGYI 3FC3A 2N17A 1TBRR 5FUXA 1DS2I 2KMOA 4L9MA 4JCVE 2ELIA 1CT2I 2SGFI 2N1AB 2KMRA 3VE5A 2XRCA 1XBTA 2LUYA 1IY6A 2QQCA 2YUUA 2P6AC 2E5RA 2KMPA 3VDPA 2NU3I 1R0RI 2ODDA 2NU0I 2KMQA 2ROWA 5JHWC 4E1PA 3GOXA 2ENZA 5EX0A 1CSOI 2OVOA 1SGNI 5CCLA 3B4VC 1PCEA 1CHOI 2JW6A 2WCYA 4UXIA 1SGDI 1PTRA 1CT0I 1TOTA 1W4RA 1M8BA 2SGEI 4E1RA 3CXLA 2CJSC 1UUCA 5DAEA 1TBOA 2JZMA 2SGDI 2A20A 2DB6A 2V53A 1H0ZA 1DS3I 3KY9A 2QQDA 3E2IA 3MEKA 2SGQI 1PTQA 1IY5A 3SGQI 1BUSA 1OMTA 3OXGA 1OVOA 5FUVA 1W3SA 2V1CA 1LR7A 2QQ0A 1X4SA 2FNFX 2QPOA 1SGPI 1V1HA 3UGIA 5FUYA 1SGEI 1X74A 1MT1A 1FARA 1KBEA 1FYBA 2NU2I 2GKRI 1Z7KB 1LR9A 1M8CA 3QWPA 2F3CI 2VRWB 1SGRI 1TIHA 1V1IA 2DIPA 1XX6A 3PDNA 2ARPF 1SGQI 2K9HA 2M5XA 2V1CC 3UEJA 3VDUA 2OD1A 1YU6C 2B8TA 2GKVA 3TJQA 4SGBI 4UXHA 3SGBI 1BMOA 1HPTA 5CCMA 1TBQR 2N71A 1CGJI 2QQEA 1PJUA 3D00A 2UZ3A 3OVOA 2JXDA 1CGII 3OL0A 4FKDA 5EX3A 1HJAI 1YTPA 3SEKC 1RFHA 2JYYA 2ORVA 2NU4I 1N13A 3QTLD 4B6DA 1U5KA 1AN1I 2GVIA 1Y1BA 2JA1A 3UGDA 2GKTI 1NUBA 2L8EA 2BUSA 2ERWA 2ORWA 1Y8FA 2W0TA 4HGUA 2ENNA 2WVJA 2KCXA 2E73A 3BJIA 1HDLA 1TURA 1OMUA 1R79A 2J87A 1UVFA 3E59A 5HI7A 3UGLA 1FAQA 3HH2C 2B0UC 1TUSA 1UVGA 2NU1I 1KMAA 1Y1CA 4GI3C 1VDDA 2YQPA 2L7XA 5HQ8A 1XA6A 4OVOA 4A24A 1LR8A 1CE3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2SGP I;  1TGS I;  1IW4 A;  2LEO A;  1CT4 I;  1OYV I;  2N52 A;  1PPF I;  1SGY I;  2N17 A;  1TBR R;  1DS2 I;  2KMO A;  1CT2 I;  2SGF I;  2KMR A;  2XRC A;  1IY6 A;  2QQC A;  2P6A C;  2KMP A;  2NU3 I;  1R0R I;  2NU0 I;  2KMQ A;  5JHW C;  1CSO I;  2OVO A;  1SGN I;  3B4V C;  1PCE A;  1CHO I;  2WCY A;  1SGD I;  1CT0 I;  2SGE I;  1M8B A;  1UUC A;  5DAE A;  2JZM A;  2SGD I;  2V53 A;  1H0Z A;  1DS3 I;  2QQD A;  2SGQ I;  1IY5 A;  3SGQ I;  1BUS A;  1OMT A;  1OVO A;  1LR7 A;  1SGP I;  1SGE I;  1MT1 A;  1FYB A;  2NU2 I;  2GKR I;  1Z7K B;  1LR9 A;  1M8C A;  2F3C I;  1SGR I;  1TIH A;  2ARP F;  1SGQ I;  2M5X A;  1YU6 C;  2GKV A;  3TJQ A;  4SGB I;  3SGB I;  1BMO A;  1HPT A;  1TBQ R;  2N71 A;  1CGJ I;  1PJU A;  3OVO A;  2JXD A;  1CGI I;  1HJA I;  1YTP A;  3SEK C;  2JYY A;  2NU4 I;  1N13 A;  3QTL D;  1AN1 I;  1Y1B A;  2GKT I;  1NUB A;  2BUS A;  2ERW A;  4HGU A;  2KCX A;  1HDL A;  1TUR A;  1OMU A;  1UVF A;  3HH2 C;  2B0U C;  1TUS A;  1UVG A;  2NU1 I;  1KMA A;  1Y1C A;  4GI3 C;  4OVO A;  1LR8 A;  1CE3 A; 
#chains in the Genus database with same CATH topology
 3TO6 A;  3UEY A;  2SGP I;  1TGS I;  5FUW A;  1Q9B A;  1WKX A;  3UFF A;  3OXL A;  3OXF A;  3UOE A;  1TBN A;  1IW4 A;  2J9R A;  4UXJ A;  3TOA A;  3RU0 A;  1KBF A;  2LEO A;  1CT4 I;  1OYV I;  2N52 A;  1PPF I;  1SGY I;  3FC3 A;  2N17 A;  1TBR R;  5FUX A;  4MPI A;  1DS2 I;  2KMO A;  4L9M A;  4JCV E;  2ELI A;  1P9Z A;  1CT2 I;  2SGF I;  2N1A B;  1S20 A;  2KMR A;  2XRC A;  3VE5 A;  1XBT A;  2LUY A;  1IY6 A;  1HEV A;  2QQC A;  2YUU A;  2P6A C;  9WGA A;  2E5R A;  2KMP A;  3TOB A;  2NU3 I;  3VDP A;  1R0R I;  2ODD A;  2NU0 I;  1P9G A;  2KMQ A;  2ROW A;  4E1P A;  5JHW C;  5J8F A;  5J8C A;  2ENZ A;  3GOX A;  5EX0 A;  1CSO I;  2OVO A;  1SGN I;  5CCL A;  3B4V C;  1PCE A;  1CHO I;  2JW6 A;  2PQ8 A;  2WCY A;  4UXI A;  1SGD I;  1MJ9 A;  1PTR A;  1CT0 I;  1TOT A;  1W4R A;  1M8B A;  2SGE I;  4E1R A;  3CXL A;  1ULM A;  2CJS C;  1UUC A;  5DAE A;  5E3R A;  1TBO A;  1FY7 A;  2JZM A;  2SGD I;  2A20 A;  2DB6 A;  2WGC A;  2V53 A;  3R5C A;  1H0Z A;  1DS3 I;  3KY9 A;  2QQD A;  3E2I A;  3MEK A;  2SGQ I;  1PTQ A;  1IY5 A;  3SGQ I;  1BUS A;  1OMT A;  3OXG A;  1OVO A;  2GIV A;  5FUV A;  1W3S A;  2V1C A;  1ULK A;  2CWF A;  1LR7 A;  2QQ0 A;  1X4S A;  2FNF X;  3TO9 A;  2QPO A;  1SGP I;  1V1H A;  3UGI A;  5FUY A;  1SGE I;  1X74 A;  2RC4 A;  2DKV A;  1MT1 A;  1FAR A;  1KBE A;  7WGA A;  1FYB A;  1WGC A;  2NU2 I;  3FSX A;  2GKR I;  1Z7K B;  1LR9 A;  1MJB A;  1M8C A;  3QWP A;  2F3C I;  2VRW B;  1SGR I;  4WP4 A;  1TIH A;  1V1I A;  1MJA A;  1XX6 A;  2DIP A;  3PDN A;  5E3P A;  2ARP F;  1SGQ I;  2CWH A;  2K9H A;  2OZU A;  2M5X A;  2V1C C;  2X52 A;  3QAH A;  3UEJ A;  3VDU A;  2OD1 A;  1YU6 C;  1UHA A;  2B8T A;  2CWG A;  2GKV A;  3TJQ A;  4SGB I;  4UXH A;  3SGB I;  1BMO A;  1HPT A;  5CCM A;  1TBQ R;  2N71 A;  1CGJ I;  2QQE A;  3R5A A;  5E3Q A;  2LB7 A;  1PJU A;  3FSY A;  3D00 A;  2UZ3 A;  1NXU A;  3OVO A;  2JXD A;  1WGT A;  1K7U A;  1CGI I;  3OL0 A;  4FKD A;  5EX3 A;  1HJA I;  1YTP A;  3SEK C;  1RFH A;  2JYY A;  2ORV A;  2NU4 I;  1N13 A;  2X3T A;  1WTJ A;  3QTL D;  4B6D A;  1U5K A;  1AN1 I;  2GVI A;  1Y1B A;  2JA1 A;  2UVO A;  3UGD A;  2GKT I;  1NUB A;  2L8E A;  2BUS A;  2ERW A;  2ORW A;  1Y8F A;  2W0T A;  4HGU A;  2ENN A;  2WVJ A;  2KCX A;  2E73 A;  3BJI A;  1HDL A;  1TUR A;  1K7T A;  1OMU A;  1K7V A;  1R79 A;  2J87 A;  1UVF A;  2OU2 A;  3R5B A;  2Y0M A;  3E59 A;  3TO7 A;  1Z2I A;  5HI7 A;  3UGL A;  1ULN A;  1FAQ A;  3HH2 C;  2B0U C;  1TUS A;  2RIJ A;  1UVG A;  2NU1 I;  1KMA A;  1Y1C A;  4GI3 C;  1VDD A;  2YQP A;  2L7X A;  3R5D A;  1XA6 A;  4OVO A;  5HQ8 A;  4AML A;  4A24 A;  1LR8 A;  1CE3 A;  4DNC A; 
#chains in the Genus database with same CATH homology
 3UEY A;  2SGP I;  1TGS I;  5FUW A;  3UFF A;  3OXL A;  3OXF A;  1TBN A;  1IW4 A;  2J9R A;  4UXJ A;  3RU0 A;  1KBF A;  2LEO A;  1CT4 I;  1OYV I;  2N52 A;  1PPF I;  1SGY I;  3FC3 A;  2N17 A;  1TBR R;  5FUX A;  1DS2 I;  2KMO A;  4L9M A;  4JCV E;  2ELI A;  1CT2 I;  2SGF I;  2N1A B;  2KMR A;  3VE5 A;  2XRC A;  1XBT A;  2LUY A;  1IY6 A;  2QQC A;  2YUU A;  2P6A C;  2E5R A;  2KMP A;  3VDP A;  2NU3 I;  1R0R I;  2ODD A;  2NU0 I;  2KMQ A;  2ROW A;  5JHW C;  4E1P A;  3GOX A;  2ENZ A;  5EX0 A;  1CSO I;  2OVO A;  1SGN I;  5CCL A;  3B4V C;  1PCE A;  1CHO I;  2JW6 A;  2WCY A;  4UXI A;  1SGD I;  1PTR A;  1CT0 I;  1TOT A;  1W4R A;  1M8B A;  2SGE I;  4E1R A;  3CXL A;  2CJS C;  1UUC A;  5DAE A;  1TBO A;  2JZM A;  2SGD I;  2A20 A;  2DB6 A;  2V53 A;  1H0Z A;  1DS3 I;  3KY9 A;  2QQD A;  3E2I A;  3MEK A;  2SGQ I;  1PTQ A;  1IY5 A;  3SGQ I;  1BUS A;  1OMT A;  3OXG A;  1OVO A;  5FUV A;  1W3S A;  2V1C A;  1LR7 A;  2QQ0 A;  1X4S A;  2FNF X;  2QPO A;  1SGP I;  1V1H A;  3UGI A;  5FUY A;  1SGE I;  1X74 A;  1MT1 A;  1FAR A;  1KBE A;  1FYB A;  2NU2 I;  2GKR I;  1Z7K B;  1LR9 A;  1M8C A;  3QWP A;  2F3C I;  2VRW B;  1SGR I;  1TIH A;  1V1I A;  2DIP A;  1XX6 A;  3PDN A;  2ARP F;  1SGQ I;  2K9H A;  2M5X A;  2V1C C;  3UEJ A;  3VDU A;  2OD1 A;  1YU6 C;  2B8T A;  2GKV A;  3TJQ A;  4SGB I;  4UXH A;  3SGB I;  1BMO A;  1HPT A;  5CCM A;  1TBQ R;  2N71 A;  1CGJ I;  2QQE A;  1PJU A;  3D00 A;  2UZ3 A;  3OVO A;  2JXD A;  1CGI I;  3OL0 A;  4FKD A;  5EX3 A;  1HJA I;  1YTP A;  3SEK C;  1RFH A;  2JYY A;  2ORV A;  2NU4 I;  1N13 A;  3QTL D;  4B6D A;  1U5K A;  1AN1 I;  2GVI A;  1Y1B A;  2JA1 A;  3UGD A;  2GKT I;  1NUB A;  2L8E A;  2BUS A;  2ERW A;  2ORW A;  1Y8F A;  2W0T A;  4HGU A;  2ENN A;  2WVJ A;  2KCX A;  2E73 A;  3BJI A;  1HDL A;  1TUR A;  1OMU A;  1R79 A;  2J87 A;  1UVF A;  3E59 A;  5HI7 A;  3UGL A;  1FAQ A;  3HH2 C;  2B0U C;  1TUS A;  1UVG A;  2NU1 I;  1KMA A;  1Y1C A;  4GI3 C;  1VDD A;  2YQP A;  2L7X A;  5HQ8 A;  1XA6 A;  4OVO A;  4A24 A;  1LR8 A;  1CE3 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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