3OWAA

Crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis
Total Genus 224
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
224
sequence length
587
structure length
584
Chain Sequence
AVKGGSFLVDEITIDQVFTPEDFSSEHKMIAKTTEDFIVNEVLPELEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEELMMMEVGDEPLALQKYLVNNAKKIGLMVAGLAAQKYGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEAHAKETLIAVENGDMLRMMLSSLRKLTRHTPLNVIPKKREIAAKILEDERYTV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Acyl-CoA dehydrogenase
publication title Crystal Structure of Acyl-CoA Dehydrogenase complexed with FAD from Bacillus anthracis
rcsb
source organism Bacillus anthracis
molecule tags Oxidoreductase
total genus 224
structure length 584
sequence length 587
chains with identical sequence B, C, D
ec nomenclature ec 1.3.99.-:
pdb deposition date 2010-09-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain
A PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain
A PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 3owaA01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 3owaA04
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 3owaA03
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 3owaA02
3FO3A 4O5MA 3LGQA 1SIRA 2OR0A 3B96A 3OIBA 3UU9A 4N5FA 4Q0TA 1JQIA 2EBAA 2RF7A 4L3YA 1EGEA 2Z1QA 3MXLA 1IVHA 4G5EA 1RX0A 2C0UA 3D9DA 1QDBA 5K3HA 2VIGA 4P13A 3SWOA 2FONA 5K3GA 3GM6A 2JIFA 4ZXVA 3EOMA 2IX5A 4U83A 2J7AA 3II9A 3MPIA 3BNJA 2DDHA 3OWMA 3P4TA 5K3IA 2ZAFA 3L1TA 2DVLA 3D1IA 3PFDA 4Q17A 4WJYA 1UKWA 4X28C 3TORA 2C12A 2YYJA 1SIQA 4HR3A 3NF4A 1FS9A 2PG0A 2YYLA 2YYMA 3AFFA 2REHA 3MKHA 3BNFA 4L3ZA 3GNCA 2IX6A 3OWAA 4Q4UA 3X0XA 2R0NA 2JBSA 2UXWA 4X28A 2YYIA 3LG1A 3GQTA 4W9UA 1FS8A 3F29A 4M9AA 2WBIA 3MMOA 2OT4A 2VR0A 3FCJA 3X0YA 3SXQA 1FS7A 4Q5BA 3AFEA 4L38A 3SCEA 3HWCA 2RDZA 4L3XA 3TTBA 3D9EA 3EONA 2E81A 2YYGA 3MPJA 1W07A 1GU6A 4IV6A 1OAHA 1BUCA 3D6BA 2R0MA 2ZO5A 1U8VA 2D29A 4XVXA 3RKHA 2CX9A 4Q1OA 3M9VA 2E80A 3S7WA 4RM7A 4Q5CA 3MDEA 1EGDA 3BNGA 4ZYJA 4KCFA 3UBRA 4NXLA 4DOYA 2JBRA 1EGCA 1UDYA 1WS9A 1R2JA 2RFQA 3SF6A 2A1TA 4OO2A 4KTOA 5K3JA 3D9GA 2YYKA 3R7KA 1IS2A 3BNHA 3D9FA 4L1FA 1T9GA 4JEKA 4IRNA 2JBTA 3MDDA
chains in the Genus database with same CATH superfamily
1XFXA 2LFWA 3FO3A 3N0RA 4O5MA 2AO2A 3LGQA 1SIRA 2OR0A 3B96A 3OIBA 4P79A 3UU9A 4N5FA 2CJ8A 3VKGA 2OJQA 1JQIA 2EBAA 1LVCA 1XFYA 2ZDYA 4Q0TA 2QR4A 2RF7A 2ZDXA 5M4MA 4L3YA 3TZ4A 5BRMA 2BTZA 4V25A 3VKHA 3TZ2A 1EGEA 2Z1QA 3MXLA 5M4KA 1IVHA 4V26A 4G5EA 1K90A 1RX0A 2C0UA 3D9DA 1QDBA 2BU5A 5B5VA 5K3HA 4FZ4A 2VIGA 4DZYA 4P13A 3SWOA 2FONA 5K3GA 3GM6A 3VADA 2BU6A 2JIFA 4ZXVA 1K93A 3EOMA 2IX5A 4U83A 1GKZA 3II9A 3MPIA 2BU7A 2J7AA 3BNJA 3KMLA 4KSFA 2DDHA 1R3BA 1Y0VA 3OWMA 3P4TA 5K3IA 1X8ZA 2ZAFA 1JM6A 2DVLA 3D1IA 3PFDA 3L1TA 4Q17A 4WJYA 1UKWA 4AKHA 4X28C 3TORA 2C12A 2YYJA 4H7QA 3X29A 1SIQA 4G97A 4HR3A 3NF4A 1FS9A 1X90A 2PG0A 4MPEA 2YYLA 5M4NA 2YYMA 3AFFA 3C3LA 3Q0AA 2REHA 1Y8OA 2Q8FA 3C46A 3MKHA 3BNFA 4L3ZA 3GNCA 2IX6A 3OWAA 2BU8A 2XQRB 3X0XA 2CJ7A 2R0NA 2JBSA 2UXWA 4X28A 2YYIA 3LG1A 3Q23A 3CRKA 3GQTA 4W9UA 1FS8A 2HJNA 2PO4A 4M9AA 3F29A 4FF4A 2WBIA 5GJVE 4KS9A 3MMOA 2OT4A 2VR0A 1RJ1A 3FCJA 2R02A 5BRKA 4E00A 3X0YA 3SXQA 1FS7A 1XFUA 1XG2B 1SC5A 4MP2A 4Q5BA 5GJWE 3Q22A 4J1VA 4MPCA 2XS8A 3AFEA 4L38A 1PI1A 4MP7A 3HWCA 3SCEA 4F0XA 2RDZA 3U33A 4L3XA 3TTBA 2EBFX 3D9EA 2R03A 2XS1A 3CE2A 4H85A 2EC5A 2GBBA 4HKSA 2Q8GA 4JIOA 4LQSB 1GKXA 3EONA 1Y8NA 2E81A 2OEXA 2Q8IA 2YYGA 2EBHX 3MPJA 2F6LA 1W07A 1GU6A 2FP2A 1XFZA 4IV6A 1OAHA 2PNRA 1XFVA 4MPNA 1BUCA 3D6BA 2R0MA 2AZEA 4H81A 1X91A 2ZO5A 1U8VA 2D29A 2Q8HA 4FF1A 5J71A 4XVXA 2YGWA 3TZ0A 3RKHA 5B6BA 2VF1A 2CX9A 4Q1OA 3M9VA 2E80A 2R05A 3S7WA 3D2RA 4RM7A 4E01A 2CJ5A 4AKGA 1S26A 4Q5CA 4FF2A 5B5WA 1SK6A 4AI6A 3MDEA 1GJVA 1EGDA 3BNGA 4ZYJA 2E0AA 4HKRA 4KCFA 3UBRA 5EZ3A 4E02A 4Q4UA 2BU2A 4NXLA 4DOYA 2CJ4A 1XFWA 1RP3A 4KSAA 2JBRA 1K8TA 4AKIA 1EGCA 1Y8PA 1UDYA 5M4PA 1WS9A 1R2JA 2RFQA 2CJ6A 3SF6A 2A1TA 2FP1A 4JIZA 4OO2A 1RJ4A 4LQQB 3C2PA 4KTOA 5K3JA 3D9GA 2YYKA 4FF3A 3Q24A 2ZKJA 3R7KA 3CRLA 3DJLA 1IS2A 3BNHA 3D9FA 4L1FA 4QICA 1T9GA 4JEKA 1PK0A 3TZ5A 4IRNA 2JBTA 5J6AA 3MDDA 2OEVA
chains in the Genus database with same CATH topology
3FO3A 4O5MA 3LGQA 1SIRA 2OR0A 3B96A 3OIBA 3UU9A 4N5FA 4Q0TA 1JQIA 2EBAA 2RF7A 4L3YA 1EGEA 2Z1QA 3MXLA 1IVHA 4G5EA 1RX0A 2C0UA 3D9DA 1QDBA 5K3HA 2VIGA 4P13A 3SWOA 2FONA 5K3GA 3GM6A 2JIFA 4ZXVA 3EOMA 2IX5A 4U83A 2J7AA 3II9A 3MPIA 3BNJA 2DDHA 3OWMA 3P4TA 5K3IA 2ZAFA 3L1TA 2DVLA 3D1IA 3PFDA 4Q17A 4WJYA 1UKWA 4X28C 3TORA 2C12A 2YYJA 1SIQA 4HR3A 3NF4A 1FS9A 2PG0A 2YYLA 2YYMA 3AFFA 2REHA 3MKHA 3BNFA 4L3ZA 3GNCA 2IX6A 3OWAA 4Q4UA 3X0XA 2R0NA 2JBSA 2UXWA 4X28A 2YYIA 3LG1A 3GQTA 4W9UA 1FS8A 3F29A 4M9AA 2WBIA 3MMOA 2OT4A 2VR0A 3FCJA 3X0YA 3SXQA 1FS7A 4Q5BA 3AFEA 4L38A 3SCEA 3HWCA 2RDZA 4L3XA 3TTBA 3D9EA 3EONA 2E81A 2YYGA 3MPJA 1W07A 1GU6A 4IV6A 1OAHA 1BUCA 3D6BA 2R0MA 2ZO5A 1U8VA 2D29A 4XVXA 3RKHA 2CX9A 4Q1OA 3M9VA 2E80A 3S7WA 4RM7A 4Q5CA 3MDEA 1EGDA 3BNGA 4ZYJA 4KCFA 3UBRA 4NXLA 4DOYA 2JBRA 1EGCA 1UDYA 1WS9A 1R2JA 2RFQA 3SF6A 2A1TA 4OO2A 4KTOA 5K3JA 3D9GA 2YYKA 3R7KA 1IS2A 3BNHA 3D9FA 4L1FA 1T9GA 4JEKA 4IRNA 2JBTA 3MDDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FO3 A;  4O5M A;  3LGQ A;  1SIR A;  2OR0 A;  3B96 A;  3OIB A;  3UU9 A;  4N5F A;  4Q0T A;  1JQI A;  2EBA A;  2RF7 A;  4L3Y A;  1EGE A;  2Z1Q A;  3MXL A;  1IVH A;  4G5E A;  1RX0 A;  2C0U A;  3D9D A;  1QDB A;  5K3H A;  2VIG A;  4P13 A;  3SWO A;  2FON A;  5K3G A;  3GM6 A;  2JIF A;  4ZXV A;  3EOM A;  2IX5 A;  4U83 A;  2J7A A;  3II9 A;  3MPI A;  3BNJ A;  2DDH A;  3OWM A;  3P4T A;  5K3I A;  2ZAF A;  3L1T A;  2DVL A;  3D1I A;  3PFD A;  4Q17 A;  4WJY A;  1UKW A;  4X28 C;  3TOR A;  2C12 A;  2YYJ A;  1SIQ A;  4HR3 A;  3NF4 A;  1FS9 A;  2PG0 A;  2YYL A;  2YYM A;  3AFF A;  2REH A;  3MKH A;  3BNF A;  4L3Z A;  3GNC A;  2IX6 A;  3OWA A;  4Q4U A;  3X0X A;  2R0N A;  2JBS A;  2UXW A;  4X28 A;  2YYI A;  3LG1 A;  3GQT A;  4W9U A;  1FS8 A;  3F29 A;  4M9A A;  2WBI A;  3MMO A;  2OT4 A;  2VR0 A;  3FCJ A;  3X0Y A;  3SXQ A;  1FS7 A;  4Q5B A;  3AFE A;  4L38 A;  3SCE A;  3HWC A;  2RDZ A;  4L3X A;  3TTB A;  3D9E A;  3EON A;  2E81 A;  2YYG A;  3MPJ A;  1W07 A;  1GU6 A;  4IV6 A;  1OAH A;  1BUC A;  3D6B A;  2R0M A;  2ZO5 A;  1U8V A;  2D29 A;  4XVX A;  3RKH A;  2CX9 A;  4Q1O A;  3M9V A;  2E80 A;  3S7W A;  4RM7 A;  4Q5C A;  3MDE A;  1EGD A;  3BNG A;  4ZYJ A;  4KCF A;  3UBR A;  4NXL A;  4DOY A;  2JBR A;  1EGC A;  1UDY A;  1WS9 A;  1R2J A;  2RFQ A;  3SF6 A;  2A1T A;  4OO2 A;  4KTO A;  5K3J A;  3D9G A;  2YYK A;  3R7K A;  1IS2 A;  3BNH A;  3D9F A;  4L1F A;  1T9G A;  4JEK A;  4IRN A;  2JBT A;  3MDD A; 
#chains in the Genus database with same CATH topology
 1XFX A;  2LFW A;  3FO3 A;  3N0R A;  4O5M A;  2AO2 A;  3LGQ A;  1SIR A;  2OR0 A;  3B96 A;  3OIB A;  4P79 A;  3UU9 A;  4N5F A;  2CJ8 A;  3VKG A;  2OJQ A;  1JQI A;  2EBA A;  1LVC A;  1XFY A;  2ZDY A;  4Q0T A;  2QR4 A;  2RF7 A;  2ZDX A;  5M4M A;  4L3Y A;  3TZ4 A;  5BRM A;  2BTZ A;  4V25 A;  3VKH A;  3TZ2 A;  1EGE A;  2Z1Q A;  3MXL A;  5M4K A;  1IVH A;  4V26 A;  4G5E A;  1K90 A;  1RX0 A;  2C0U A;  3D9D A;  1QDB A;  2BU5 A;  5B5V A;  5K3H A;  4FZ4 A;  2VIG A;  4DZY A;  4P13 A;  3SWO A;  2FON A;  5K3G A;  3GM6 A;  3VAD A;  2BU6 A;  2JIF A;  4ZXV A;  1K93 A;  3EOM A;  2IX5 A;  4U83 A;  1GKZ A;  3II9 A;  3MPI A;  2BU7 A;  2J7A A;  3BNJ A;  3KML A;  4KSF A;  2DDH A;  1R3B A;  1Y0V A;  3OWM A;  3P4T A;  5K3I A;  1X8Z A;  2ZAF A;  1JM6 A;  2DVL A;  3D1I A;  3PFD A;  3L1T A;  4Q17 A;  4WJY A;  1UKW A;  4AKH A;  4X28 C;  3TOR A;  2C12 A;  2YYJ A;  4H7Q A;  3X29 A;  1SIQ A;  4G97 A;  4HR3 A;  3NF4 A;  1FS9 A;  1X90 A;  2PG0 A;  4MPE A;  2YYL A;  5M4N A;  2YYM A;  3AFF A;  3C3L A;  3Q0A A;  2REH A;  1Y8O A;  2Q8F A;  3C46 A;  3MKH A;  3BNF A;  4L3Z A;  3GNC A;  2IX6 A;  3OWA A;  2BU8 A;  2XQR B;  3X0X A;  2CJ7 A;  2R0N A;  2JBS A;  2UXW A;  4X28 A;  2YYI A;  3LG1 A;  3Q23 A;  3CRK A;  3GQT A;  4W9U A;  1FS8 A;  2HJN A;  2PO4 A;  4M9A A;  3F29 A;  4FF4 A;  2WBI A;  5GJV E;  4KS9 A;  3MMO A;  2OT4 A;  2VR0 A;  1RJ1 A;  3FCJ A;  2R02 A;  5BRK A;  4E00 A;  3X0Y A;  3SXQ A;  1FS7 A;  1XFU A;  1XG2 B;  1SC5 A;  4MP2 A;  4Q5B A;  5GJW E;  3Q22 A;  4J1V A;  4MPC A;  2XS8 A;  3AFE A;  4L38 A;  1PI1 A;  4MP7 A;  3HWC A;  3SCE A;  4F0X A;  2RDZ A;  3U33 A;  4L3X A;  3TTB A;  2EBF X;  3D9E A;  2R03 A;  2XS1 A;  3CE2 A;  4H85 A;  2EC5 A;  2GBB A;  4HKS A;  2Q8G A;  4JIO A;  4LQS B;  1GKX A;  3EON A;  1Y8N A;  2E81 A;  2OEX A;  2Q8I A;  2YYG A;  2EBH X;  3MPJ A;  2F6L A;  1W07 A;  1GU6 A;  2FP2 A;  1XFZ A;  4IV6 A;  1OAH A;  2PNR A;  1XFV A;  4MPN A;  1BUC A;  3D6B A;  2R0M A;  2AZE A;  4H81 A;  1X91 A;  2ZO5 A;  1U8V A;  2D29 A;  2Q8H A;  4FF1 A;  5J71 A;  4XVX A;  2YGW A;  3TZ0 A;  3RKH A;  5B6B A;  2VF1 A;  2CX9 A;  4Q1O A;  3M9V A;  2E80 A;  2R05 A;  3S7W A;  3D2R A;  4RM7 A;  4E01 A;  2CJ5 A;  4AKG A;  1S26 A;  4Q5C A;  4FF2 A;  5B5W A;  1SK6 A;  4AI6 A;  3MDE A;  1GJV A;  1EGD A;  3BNG A;  4ZYJ A;  2E0A A;  4HKR A;  4KCF A;  3UBR A;  5EZ3 A;  4E02 A;  4Q4U A;  2BU2 A;  4NXL A;  4DOY A;  2CJ4 A;  1XFW A;  1RP3 A;  4KSA A;  2JBR A;  1K8T A;  4AKI A;  1EGC A;  1Y8P A;  1UDY A;  5M4P A;  1WS9 A;  1R2J A;  2RFQ A;  2CJ6 A;  3SF6 A;  2A1T A;  2FP1 A;  4JIZ A;  4OO2 A;  1RJ4 A;  4LQQ B;  3C2P A;  4KTO A;  5K3J A;  3D9G A;  2YYK A;  4FF3 A;  3Q24 A;  2ZKJ A;  3R7K A;  3CRL A;  3DJL A;  1IS2 A;  3BNH A;  3D9F A;  4L1F A;  4QIC A;  1T9G A;  4JEK A;  1PK0 A;  3TZ5 A;  4IRN A;  2JBT A;  5J6A A;  3MDD A;  2OEV A; 
#chains in the Genus database with same CATH homology
 3FO3 A;  4O5M A;  3LGQ A;  1SIR A;  2OR0 A;  3B96 A;  3OIB A;  3UU9 A;  4N5F A;  4Q0T A;  1JQI A;  2EBA A;  2RF7 A;  4L3Y A;  1EGE A;  2Z1Q A;  3MXL A;  1IVH A;  4G5E A;  1RX0 A;  2C0U A;  3D9D A;  1QDB A;  5K3H A;  2VIG A;  4P13 A;  3SWO A;  2FON A;  5K3G A;  3GM6 A;  2JIF A;  4ZXV A;  3EOM A;  2IX5 A;  4U83 A;  2J7A A;  3II9 A;  3MPI A;  3BNJ A;  2DDH A;  3OWM A;  3P4T A;  5K3I A;  2ZAF A;  3L1T A;  2DVL A;  3D1I A;  3PFD A;  4Q17 A;  4WJY A;  1UKW A;  4X28 C;  3TOR A;  2C12 A;  2YYJ A;  1SIQ A;  4HR3 A;  3NF4 A;  1FS9 A;  2PG0 A;  2YYL A;  2YYM A;  3AFF A;  2REH A;  3MKH A;  3BNF A;  4L3Z A;  3GNC A;  2IX6 A;  3OWA A;  4Q4U A;  3X0X A;  2R0N A;  2JBS A;  2UXW A;  4X28 A;  2YYI A;  3LG1 A;  3GQT A;  4W9U A;  1FS8 A;  3F29 A;  4M9A A;  2WBI A;  3MMO A;  2OT4 A;  2VR0 A;  3FCJ A;  3X0Y A;  3SXQ A;  1FS7 A;  4Q5B A;  3AFE A;  4L38 A;  3SCE A;  3HWC A;  2RDZ A;  4L3X A;  3TTB A;  3D9E A;  3EON A;  2E81 A;  2YYG A;  3MPJ A;  1W07 A;  1GU6 A;  4IV6 A;  1OAH A;  1BUC A;  3D6B A;  2R0M A;  2ZO5 A;  1U8V A;  2D29 A;  4XVX A;  3RKH A;  2CX9 A;  4Q1O A;  3M9V A;  2E80 A;  3S7W A;  4RM7 A;  4Q5C A;  3MDE A;  1EGD A;  3BNG A;  4ZYJ A;  4KCF A;  3UBR A;  4NXL A;  4DOY A;  2JBR A;  1EGC A;  1UDY A;  1WS9 A;  1R2J A;  2RFQ A;  3SF6 A;  2A1T A;  4OO2 A;  4KTO A;  5K3J A;  3D9G A;  2YYK A;  3R7K A;  1IS2 A;  3BNH A;  3D9F A;  4L1F A;  1T9G A;  4JEK A;  4IRN A;  2JBT A;  3MDD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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