3OWAA

Crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis
Total Genus 224
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
224
sequence length
587
structure length
584
Chain Sequence
AVKGGSFLVDEITIDQVFTPEDFSSEHKMIAKTTEDFIVNEVLPELEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEELMMMEVGDEPLALQKYLVNNAKKIGLMVAGLAAQKYGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEAHAKETLIAVENGDMLRMMLSSLRKLTRHTPLNVIPKKREIAAKILEDERYTV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Crystal Structure of Acyl-CoA Dehydrogenase complexed with FAD from Bacillus anthracis
rcsb
molecule tags Oxidoreductase
source organism Bacillus anthracis
molecule keywords Acyl-CoA dehydrogenase
total genus 224
structure length 584
sequence length 587
chains with identical sequence B, C, D
ec nomenclature ec 1.3.99.-:
pdb deposition date 2010-09-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain
A PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain
A PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 3owaA01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 3owaA04
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 3owaA03
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 3owaA02
3MMOA 4N5FA 2YYGA 4WJYA 1R2JA 4Q5CA 2E81A 3GM6A 2ZAFA 5K3IA 3MXLA 1JQIA 4Q17A 3X0YA 3TORA 3P4TA 4KTOA 3SXQA 3BNGA 4L3YA 3BNFA 4NXLA 1EGEA 4L1FA 2YYJA 5K3HA 3RKHA 1UDYA 1SIQA 2VIGA 4RM7A 2IX5A 2DDHA 4Q4UA 2JBSA 4M9AA 3D1IA 4G5EA 4OO2A 3GNCA 4HR3A 3LG1A 3OIBA 4Q5BA 2RF7A 4L38A 3L1TA 3BNJA 1W07A 3EOMA 3D9EA 3OWAA 3D9GA 3FO3A 1BUCA 3UU9A 2R0NA 2C12A 3GQTA 2EBAA 2Z1QA 4X28A 3F29A 4P13A 4W9UA 2UXWA 2PG0A 3D9DA 2RDZA 1UKWA 4KCFA 1FS7A 1IVHA 2C0UA 3MDDA 4IV6A 3SF6A 4Q1OA 3FCJA 3NF4A 4U83A 3BNHA 1FS9A 4JEKA 2YYLA 3SWOA 1QDBA 3MPJA 3D9FA 2YYKA 2ZO5A 1EGDA 3SCEA 1EGCA 3MDEA 3MPIA 3S7WA 3TTBA 3M9VA 1IS2A 2OT4A 2J7AA 2FONA 3R7KA 2D29A 4X28C 4ZYJA 4ZXVA 1WS9A 4DOYA 1GU6A 2YYIA 2JBTA 2VR0A 2E80A 1U8VA 2CX9A 2JBRA 2RFQA 3LGQA 2IX6A 3MKHA 5K3JA 1SIRA 1FS8A 3UBRA 4Q0TA 3B96A 3HWCA 2DVLA 2R0MA 5K3GA 4IRNA 2A1TA 3OWMA 3EONA 3AFEA 4L3ZA 1T9GA 1RX0A 1OAHA 3II9A 3PFDA 2REHA 3AFFA 4L3XA 2JIFA 3D6BA 4O5MA 2WBIA 3X0XA 2OR0A 4XVXA 2YYMA
chains in the Genus database with same CATH superfamily
3MMOA 2Q8FA 4N5FA 2YYGA 4WJYA 2Q8HA 1R2JA 4Q5CA 2E81A 3GM6A 2ZAFA 2R02A 5K3IA 3VADA 5B5WA 3MXLA 2BU6A 4MP2A 1JQIA 4P79A 4JIOA 4Q17A 3X0YA 2XQRB 5GJVE 4AKHA 4FZ4A 4MPEA 3TORA 3TZ0A 2FP2A 3P4TA 5EZ3A 5B6BA 4KTOA 3SXQA 3BNGA 4L3YA 3BNFA 5M4NA 4NXLA 1EGEA 2BU7A 4L1FA 1XFXA 2YYJA 5K3HA 2EBFX 3RKHA 1UDYA 2AO2A 3TZ4A 1SIQA 1K93A 5M4MA 2VIGA 1RP3A 1XFYA 4RM7A 2CJ4A 2Q8IA 2IX5A 2DDHA 3Q22A 1K90A 4FF4A 3CRKA 4Q4UA 2JBSA 4HKRA 2XS1A 4M9AA 3Q0AA 5GJWE 4J1VA 3VKGA 3D1IA 4G5EA 4OO2A 3GNCA 4HR3A 3LG1A 3OIBA 2AZEA 2R03A 4Q5BA 2RF7A 5BRKA 4H81A 3L1TA 4L38A 5BRMA 3BNJA 1W07A 3EOMA 3D9EA 3OWAA 1RJ4A 4JIZA 4MP7A 3D9GA 2CJ6A 3FO3A 1BUCA 4LQQB 2ZDYA 3UU9A 2R0NA 4KSFA 2C12A 3GQTA 2EBAA 2Z1QA 4X28A 2GBBA 4LQSB 1JM6A 3F29A 4AKGA 4DZYA 4P13A 2PO4A 4W9UA 2UXWA 2Q8GA 5M4KA 2PG0A 3D9DA 1R3BA 2RDZA 4QICA 1UKWA 4KCFA 4H85A 1FS7A 1IVHA 2C0UA 3MDDA 4IV6A 3SF6A 1GJVA 4MPCA 4Q1OA 4E02A 3CE2A 4V26A 2FP1A 3FCJA 4G97A 3NF4A 4AI6A 3N0RA 4U83A 3BNHA 1XFWA 1FS9A 1XFUA 4JEKA 2YYLA 3SWOA 5J6AA 1Y8NA 1QDBA 4KS9A 3MPJA 3D9FA 2YYKA 2ZO5A 3Q24A 1EGDA 3SCEA 3C3LA 2BU5A 1EGCA 2OJQA 1PK0A 2ZDXA 2F6LA 3MDEA 1LVCA 3MPIA 2BTZA 2CJ8A 3S7WA 3TTBA 3M9VA 1IS2A 1X8ZA 3TZ5A 3VKHA 2OT4A 1K8TA 2HJNA 2J7AA 2OEVA 1Y8OA 2FONA 4FF2A 2BU8A 3R7KA 2D29A 4X28C 4ZYJA 4ZXVA 1Y8PA 2R05A 1WS9A 4DOYA 1GU6A 2CJ5A 2JBTA 1XFVA 2VR0A 2YYIA 2VF1A 4E00A 4AKIA 2E80A 1PI1A 3Q23A 1Y0VA 1U8VA 4H7QA 2CX9A 2JBRA 2RFQA 3D2RA 3LGQA 1XG2B 2IX6A 2XS8A 3MKHA 2E0AA 2LFWA 5K3JA 4FF3A 1SIRA 2EC5A 1FS8A 3UBRA 4Q0TA 3B96A 3KMLA 1X90A 3HWCA 4HKSA 1S26A 4F0XA 2DVLA 3TZ2A 2R0MA 5K3GA 1RJ1A 1SC5A 4IRNA 1XFZA 2OEXA 2A1TA 3OWMA 3EONA 3AFEA 4L3ZA 1GKXA 1T9GA 3C46A 2BU2A 4V25A 4FF1A 1RX0A 2CJ7A 2ZKJA 1OAHA 4MPNA 3II9A 3PFDA 3U33A 2EBHX 1X91A 2PNRA 2REHA 3AFFA 2QR4A 4L3XA 1GKZA 3X29A 4E01A 2JIFA 3D6BA 3CRLA 4O5MA 5J71A 3C2PA 3DJLA 2WBIA 1SK6A 2YGWA 5M4PA 3X0XA 4KSAA 2OR0A 4XVXA 2YYMA 5B5VA
chains in the Genus database with same CATH topology
3MMOA 4N5FA 2YYGA 4WJYA 1R2JA 4Q5CA 2E81A 3GM6A 2ZAFA 5K3IA 3MXLA 1JQIA 4Q17A 3X0YA 3TORA 3P4TA 4KTOA 3SXQA 3BNGA 4L3YA 3BNFA 4NXLA 1EGEA 4L1FA 2YYJA 5K3HA 3RKHA 1UDYA 1SIQA 2VIGA 4RM7A 2IX5A 2DDHA 4Q4UA 2JBSA 4M9AA 3D1IA 4G5EA 4OO2A 3GNCA 4HR3A 3LG1A 3OIBA 4Q5BA 2RF7A 4L38A 3L1TA 3BNJA 1W07A 3EOMA 3D9EA 3OWAA 3D9GA 3FO3A 1BUCA 3UU9A 2R0NA 2C12A 3GQTA 2EBAA 2Z1QA 4X28A 3F29A 4P13A 4W9UA 2UXWA 2PG0A 3D9DA 2RDZA 1UKWA 4KCFA 1FS7A 1IVHA 2C0UA 3MDDA 4IV6A 3SF6A 4Q1OA 3FCJA 3NF4A 4U83A 3BNHA 1FS9A 4JEKA 2YYLA 3SWOA 1QDBA 3MPJA 3D9FA 2YYKA 2ZO5A 1EGDA 3SCEA 1EGCA 3MDEA 3MPIA 3S7WA 3TTBA 3M9VA 1IS2A 2OT4A 2J7AA 2FONA 3R7KA 2D29A 4X28C 4ZYJA 4ZXVA 1WS9A 4DOYA 1GU6A 2YYIA 2JBTA 2VR0A 2E80A 1U8VA 2CX9A 2JBRA 2RFQA 3LGQA 2IX6A 3MKHA 5K3JA 1SIRA 1FS8A 3UBRA 4Q0TA 3B96A 3HWCA 2DVLA 2R0MA 5K3GA 4IRNA 2A1TA 3OWMA 3EONA 3AFEA 4L3ZA 1T9GA 1RX0A 1OAHA 3II9A 3PFDA 2REHA 3AFFA 4L3XA 2JIFA 3D6BA 4O5MA 2WBIA 3X0XA 2OR0A 4XVXA 2YYMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3MMO A;  4N5F A;  2YYG A;  4WJY A;  1R2J A;  4Q5C A;  2E81 A;  3GM6 A;  2ZAF A;  5K3I A;  3MXL A;  1JQI A;  4Q17 A;  3X0Y A;  3TOR A;  3P4T A;  4KTO A;  3SXQ A;  3BNG A;  4L3Y A;  3BNF A;  4NXL A;  1EGE A;  4L1F A;  2YYJ A;  5K3H A;  3RKH A;  1UDY A;  1SIQ A;  2VIG A;  4RM7 A;  2IX5 A;  2DDH A;  4Q4U A;  2JBS A;  4M9A A;  3D1I A;  4G5E A;  4OO2 A;  3GNC A;  4HR3 A;  3LG1 A;  3OIB A;  4Q5B A;  2RF7 A;  4L38 A;  3L1T A;  3BNJ A;  1W07 A;  3EOM A;  3D9E A;  3OWA A;  3D9G A;  3FO3 A;  1BUC A;  3UU9 A;  2R0N A;  2C12 A;  3GQT A;  2EBA A;  2Z1Q A;  4X28 A;  3F29 A;  4P13 A;  4W9U A;  2UXW A;  2PG0 A;  3D9D A;  2RDZ A;  1UKW A;  4KCF A;  1FS7 A;  1IVH A;  2C0U A;  3MDD A;  4IV6 A;  3SF6 A;  4Q1O A;  3FCJ A;  3NF4 A;  4U83 A;  3BNH A;  1FS9 A;  4JEK A;  2YYL A;  3SWO A;  1QDB A;  3MPJ A;  3D9F A;  2YYK A;  2ZO5 A;  1EGD A;  3SCE A;  1EGC A;  3MDE A;  3MPI A;  3S7W A;  3TTB A;  3M9V A;  1IS2 A;  2OT4 A;  2J7A A;  2FON A;  3R7K A;  2D29 A;  4X28 C;  4ZYJ A;  4ZXV A;  1WS9 A;  4DOY A;  1GU6 A;  2YYI A;  2JBT A;  2VR0 A;  2E80 A;  1U8V A;  2CX9 A;  2JBR A;  2RFQ A;  3LGQ A;  2IX6 A;  3MKH A;  5K3J A;  1SIR A;  1FS8 A;  3UBR A;  4Q0T A;  3B96 A;  3HWC A;  2DVL A;  2R0M A;  5K3G A;  4IRN A;  2A1T A;  3OWM A;  3EON A;  3AFE A;  4L3Z A;  1T9G A;  1RX0 A;  1OAH A;  3II9 A;  3PFD A;  2REH A;  3AFF A;  4L3X A;  2JIF A;  3D6B A;  4O5M A;  2WBI A;  3X0X A;  2OR0 A;  4XVX A;  2YYM A; 
#chains in the Genus database with same CATH topology
 3MMO A;  2Q8F A;  4N5F A;  2YYG A;  4WJY A;  2Q8H A;  1R2J A;  4Q5C A;  2E81 A;  3GM6 A;  2ZAF A;  2R02 A;  5K3I A;  3VAD A;  5B5W A;  3MXL A;  2BU6 A;  4MP2 A;  1JQI A;  4P79 A;  4JIO A;  4Q17 A;  3X0Y A;  2XQR B;  5GJV E;  4AKH A;  4FZ4 A;  4MPE A;  3TOR A;  3TZ0 A;  2FP2 A;  3P4T A;  5EZ3 A;  5B6B A;  4KTO A;  3SXQ A;  3BNG A;  4L3Y A;  3BNF A;  5M4N A;  4NXL A;  1EGE A;  2BU7 A;  4L1F A;  1XFX A;  2YYJ A;  5K3H A;  2EBF X;  3RKH A;  1UDY A;  2AO2 A;  3TZ4 A;  1SIQ A;  1K93 A;  5M4M A;  2VIG A;  1RP3 A;  1XFY A;  4RM7 A;  2CJ4 A;  2Q8I A;  2IX5 A;  2DDH A;  3Q22 A;  1K90 A;  4FF4 A;  3CRK A;  4Q4U A;  2JBS A;  4HKR A;  2XS1 A;  4M9A A;  3Q0A A;  5GJW E;  4J1V A;  3VKG A;  3D1I A;  4G5E A;  4OO2 A;  3GNC A;  4HR3 A;  3LG1 A;  3OIB A;  2AZE A;  2R03 A;  4Q5B A;  2RF7 A;  5BRK A;  4H81 A;  3L1T A;  4L38 A;  5BRM A;  3BNJ A;  1W07 A;  3EOM A;  3D9E A;  3OWA A;  1RJ4 A;  4JIZ A;  4MP7 A;  3D9G A;  2CJ6 A;  3FO3 A;  1BUC A;  4LQQ B;  2ZDY A;  3UU9 A;  2R0N A;  4KSF A;  2C12 A;  3GQT A;  2EBA A;  2Z1Q A;  4X28 A;  2GBB A;  4LQS B;  1JM6 A;  3F29 A;  4AKG A;  4DZY A;  4P13 A;  2PO4 A;  4W9U A;  2UXW A;  2Q8G A;  5M4K A;  2PG0 A;  3D9D A;  1R3B A;  2RDZ A;  4QIC A;  1UKW A;  4KCF A;  4H85 A;  1FS7 A;  1IVH A;  2C0U A;  3MDD A;  4IV6 A;  3SF6 A;  1GJV A;  4MPC A;  4Q1O A;  4E02 A;  3CE2 A;  4V26 A;  2FP1 A;  3FCJ A;  4G97 A;  3NF4 A;  4AI6 A;  3N0R A;  4U83 A;  3BNH A;  1XFW A;  1FS9 A;  1XFU A;  4JEK A;  2YYL A;  3SWO A;  5J6A A;  1Y8N A;  1QDB A;  4KS9 A;  3MPJ A;  3D9F A;  2YYK A;  2ZO5 A;  3Q24 A;  1EGD A;  3SCE A;  3C3L A;  2BU5 A;  1EGC A;  2OJQ A;  1PK0 A;  2ZDX A;  2F6L A;  3MDE A;  1LVC A;  3MPI A;  2BTZ A;  2CJ8 A;  3S7W A;  3TTB A;  3M9V A;  1IS2 A;  1X8Z A;  3TZ5 A;  3VKH A;  2OT4 A;  1K8T A;  2HJN A;  2J7A A;  2OEV A;  1Y8O A;  2FON A;  4FF2 A;  2BU8 A;  3R7K A;  2D29 A;  4X28 C;  4ZYJ A;  4ZXV A;  1Y8P A;  2R05 A;  1WS9 A;  4DOY A;  1GU6 A;  2CJ5 A;  2JBT A;  1XFV A;  2VR0 A;  2YYI A;  2VF1 A;  4E00 A;  4AKI A;  2E80 A;  1PI1 A;  3Q23 A;  1Y0V A;  1U8V A;  4H7Q A;  2CX9 A;  2JBR A;  2RFQ A;  3D2R A;  3LGQ A;  1XG2 B;  2IX6 A;  2XS8 A;  3MKH A;  2E0A A;  2LFW A;  5K3J A;  4FF3 A;  1SIR A;  2EC5 A;  1FS8 A;  3UBR A;  4Q0T A;  3B96 A;  3KML A;  1X90 A;  3HWC A;  4HKS A;  1S26 A;  4F0X A;  2DVL A;  3TZ2 A;  2R0M A;  5K3G A;  1RJ1 A;  1SC5 A;  4IRN A;  1XFZ A;  2OEX A;  2A1T A;  3OWM A;  3EON A;  3AFE A;  4L3Z A;  1GKX A;  1T9G A;  3C46 A;  2BU2 A;  4V25 A;  4FF1 A;  1RX0 A;  2CJ7 A;  2ZKJ A;  1OAH A;  4MPN A;  3II9 A;  3PFD A;  3U33 A;  2EBH X;  1X91 A;  2PNR A;  2REH A;  3AFF A;  2QR4 A;  4L3X A;  1GKZ A;  3X29 A;  4E01 A;  2JIF A;  3D6B A;  3CRL A;  4O5M A;  5J71 A;  3C2P A;  3DJL A;  2WBI A;  1SK6 A;  2YGW A;  5M4P A;  3X0X A;  4KSA A;  2OR0 A;  4XVX A;  2YYM A;  5B5V A; 
#chains in the Genus database with same CATH homology
 3MMO A;  4N5F A;  2YYG A;  4WJY A;  1R2J A;  4Q5C A;  2E81 A;  3GM6 A;  2ZAF A;  5K3I A;  3MXL A;  1JQI A;  4Q17 A;  3X0Y A;  3TOR A;  3P4T A;  4KTO A;  3SXQ A;  3BNG A;  4L3Y A;  3BNF A;  4NXL A;  1EGE A;  4L1F A;  2YYJ A;  5K3H A;  3RKH A;  1UDY A;  1SIQ A;  2VIG A;  4RM7 A;  2IX5 A;  2DDH A;  4Q4U A;  2JBS A;  4M9A A;  3D1I A;  4G5E A;  4OO2 A;  3GNC A;  4HR3 A;  3LG1 A;  3OIB A;  4Q5B A;  2RF7 A;  4L38 A;  3L1T A;  3BNJ A;  1W07 A;  3EOM A;  3D9E A;  3OWA A;  3D9G A;  3FO3 A;  1BUC A;  3UU9 A;  2R0N A;  2C12 A;  3GQT A;  2EBA A;  2Z1Q A;  4X28 A;  3F29 A;  4P13 A;  4W9U A;  2UXW A;  2PG0 A;  3D9D A;  2RDZ A;  1UKW A;  4KCF A;  1FS7 A;  1IVH A;  2C0U A;  3MDD A;  4IV6 A;  3SF6 A;  4Q1O A;  3FCJ A;  3NF4 A;  4U83 A;  3BNH A;  1FS9 A;  4JEK A;  2YYL A;  3SWO A;  1QDB A;  3MPJ A;  3D9F A;  2YYK A;  2ZO5 A;  1EGD A;  3SCE A;  1EGC A;  3MDE A;  3MPI A;  3S7W A;  3TTB A;  3M9V A;  1IS2 A;  2OT4 A;  2J7A A;  2FON A;  3R7K A;  2D29 A;  4X28 C;  4ZYJ A;  4ZXV A;  1WS9 A;  4DOY A;  1GU6 A;  2YYI A;  2JBT A;  2VR0 A;  2E80 A;  1U8V A;  2CX9 A;  2JBR A;  2RFQ A;  3LGQ A;  2IX6 A;  3MKH A;  5K3J A;  1SIR A;  1FS8 A;  3UBR A;  4Q0T A;  3B96 A;  3HWC A;  2DVL A;  2R0M A;  5K3G A;  4IRN A;  2A1T A;  3OWM A;  3EON A;  3AFE A;  4L3Z A;  1T9G A;  1RX0 A;  1OAH A;  3II9 A;  3PFD A;  2REH A;  3AFF A;  4L3X A;  2JIF A;  3D6B A;  4O5M A;  2WBI A;  3X0X A;  2OR0 A;  4XVX A;  2YYM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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