3OXOA

Succinyl-coa:3-ketoacid coa transferase from pig heart covalently bound to coa
Total Genus 139
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
139
sequence length
480
structure length
469
Chain Sequence
TKFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVREFNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKSARNFNLPMCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERLSVRKGDNVRERIIKRAALEFEDGMYANLGIGIPLLASNFISPNMTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLANWMIPGKLVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVFDVDRKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLIPMQQLE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondr
publication title Catalytic role of the conformational change in succinyl-CoA:3-oxoacid CoA transferase on binding CoA.
pubmed doi rcsb
source organism Sus scrofa
molecule tags Transferase
total genus 139
structure length 469
sequence length 480
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature ec 2.8.3.5: 3-oxoacid CoA-transferase.
pdb deposition date 2010-09-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01144 CoA_trans Coenzyme A transferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1080.10 Alpha Beta 3-Layer(aba) Sandwich Glutaconate Coenzyme A-transferase Glutaconate Coenzyme A-transferase 3oxoA01
3.40.1080.10 Alpha Beta 3-Layer(aba) Sandwich Glutaconate Coenzyme A-transferase Glutaconate Coenzyme A-transferase 3oxoA02
2NRBA 1M3EA 1OOZA 2AHVA 1POIA 2AHWA 3CDKB 3K6MA 5DBNB 3OXOA 3RRLA 1K6DA 3EH7A 2NRCA 1XR4A 1O9LA 1OOYA 1OPEA 3CDKA 2OASA 5DBNA 2AHUA 3D3UA 1POIB 4KGBA 3GK7A 2HJ0A 3DLXA 3RRLB 3QDQA
chains in the Genus database with same CATH superfamily
2NRBA 1M3EA 1OOZA 2AHVA 1POIA 2AHWA 3CDKB 3K6MA 5DBNB 3OXOA 3RRLA 1K6DA 3EH7A 2NRCA 1XR4A 1O9LA 1OOYA 1OPEA 3CDKA 2OASA 5DBNA 2AHUA 3D3UA 1POIB 4KGBA 3GK7A 2HJ0A 3DLXA 3RRLB 3QDQA
chains in the Genus database with same CATH topology
2NRBA 1M3EA 1OOZA 2AHVA 1POIA 2AHWA 3CDKB 3K6MA 5DBNB 3OXOA 3RRLA 1K6DA 3EH7A 2NRCA 1XR4A 1O9LA 1OOYA 1OPEA 3CDKA 2OASA 5DBNA 2AHUA 3D3UA 1POIB 4KGBA 3GK7A 2HJ0A 3DLXA 3RRLB 3QDQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2NRB A;  1M3E A;  1OOZ A;  2AHV A;  1POI A;  2AHW A;  3CDK B;  3K6M A;  5DBN B;  3OXO A;  3RRL A;  1K6D A;  3EH7 A;  2NRC A;  1XR4 A;  1O9L A;  1OOY A;  1OPE A;  3CDK A;  2OAS A;  5DBN A;  2AHU A;  3D3U A;  1POI B;  4KGB A;  3GK7 A;  2HJ0 A;  3DLX A;  3RRL B;  3QDQ A; 
#chains in the Genus database with same CATH topology
 2NRB A;  1M3E A;  1OOZ A;  2AHV A;  1POI A;  2AHW A;  3CDK B;  3K6M A;  5DBN B;  3OXO A;  3RRL A;  1K6D A;  3EH7 A;  2NRC A;  1XR4 A;  1O9L A;  1OOY A;  1OPE A;  3CDK A;  2OAS A;  5DBN A;  2AHU A;  3D3U A;  1POI B;  4KGB A;  3GK7 A;  2HJ0 A;  3DLX A;  3RRL B;  3QDQ A; 
#chains in the Genus database with same CATH homology
 2NRB A;  1M3E A;  1OOZ A;  2AHV A;  1POI A;  2AHW A;  3CDK B;  3K6M A;  5DBN B;  3OXO A;  3RRL A;  1K6D A;  3EH7 A;  2NRC A;  1XR4 A;  1O9L A;  1OOY A;  1OPE A;  3CDK A;  2OAS A;  5DBN A;  2AHU A;  3D3U A;  1POI B;  4KGB A;  3GK7 A;  2HJ0 A;  3DLX A;  3RRL B;  3QDQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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