3OXOA

Succinyl-coa:3-ketoacid coa transferase from pig heart covalently bound to coa
Total Genus 139
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
139
sequence length
480
structure length
469
Chain Sequence
TKFYTDAVEAVKDIPNGATVLVGGFGLCGIPENLIGALLKTGVKELTAVSNNAGVDNFGLGLLLQSKQIKRMISSYVGENAEFERQYLAGELEVELTPQGTLAERIRAGGAGVPAFYTSTGYGTLVQEGGSPIKYNKDGSIAIASKPREVREFNGQHFILEEAIRGDFALVKAWKADQAGNVTFRKSARNFNLPMCKAAETTVVEVEEIVDIGSFAPEDIHIPKIYVHRLVKGEKYEKRIERLSVRKGDNVRERIIKRAALEFEDGMYANLGIGIPLLASNFISPNMTVHLQSENGILGLGPYPLQNEVDADLINAGKETVTVLPGASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLANWMIPGKLVKGMGGAMDLVSSAKTKVVVTMEHSAKGNAHKIMEKCTLPLTGKQCVNRIITEKAVFDVDRKKGLTLIELWEGLTVDDIKKSTGCDFAVSPKLIPMQQLE
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Transferase
molecule keywords Succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondr
publication title Catalytic role of the conformational change in succinyl-CoA:3-oxoacid CoA transferase on binding CoA.
pubmed doi rcsb
source organism Sus scrofa
total genus 139
structure length 469
sequence length 480
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature ec 2.8.3.5: 3-oxoacid CoA-transferase.
pdb deposition date 2010-09-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01144 CoA_trans Coenzyme A transferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1080.10 Alpha Beta 3-Layer(aba) Sandwich Glutaconate Coenzyme A-transferase Glutaconate Coenzyme A-transferase 3oxoA01
3.40.1080.10 Alpha Beta 3-Layer(aba) Sandwich Glutaconate Coenzyme A-transferase Glutaconate Coenzyme A-transferase 3oxoA02
3GK7A 1POIB 2AHWA 3DLXA 3EH7A 3RRLB 1M3EA 3K6MA 1O9LA 1XR4A 2NRCA 3D3UA 2OASA 5DBNA 4KGBA 2AHVA 1POIA 3CDKB 3RRLA 3QDQA 2AHUA 3CDKA 1OOYA 1K6DA 1OPEA 2NRBA 3OXOA 5DBNB 2HJ0A 1OOZA
chains in the Genus database with same CATH superfamily
3GK7A 1POIB 2AHWA 3DLXA 3EH7A 3RRLB 1M3EA 3K6MA 1O9LA 1XR4A 2NRCA 3D3UA 2OASA 5DBNA 4KGBA 2AHVA 1POIA 3CDKB 3RRLA 3QDQA 2AHUA 3CDKA 1OOYA 1K6DA 1OPEA 2NRBA 3OXOA 5DBNB 2HJ0A 1OOZA
chains in the Genus database with same CATH topology
3GK7A 1POIB 2AHWA 3DLXA 3EH7A 3RRLB 1M3EA 3K6MA 1O9LA 1XR4A 2NRCA 3D3UA 2OASA 5DBNA 4KGBA 2AHVA 1POIA 3CDKB 3RRLA 3QDQA 2AHUA 3CDKA 1OOYA 1K6DA 1OPEA 2NRBA 3OXOA 5DBNB 2HJ0A 1OOZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GK7 A;  1POI B;  2AHW A;  3DLX A;  3EH7 A;  3RRL B;  1M3E A;  3K6M A;  1O9L A;  1XR4 A;  2NRC A;  3D3U A;  2OAS A;  5DBN A;  4KGB A;  2AHV A;  1POI A;  3CDK B;  3RRL A;  3QDQ A;  2AHU A;  3CDK A;  1OOY A;  1K6D A;  1OPE A;  2NRB A;  3OXO A;  5DBN B;  2HJ0 A;  1OOZ A; 
#chains in the Genus database with same CATH topology
 3GK7 A;  1POI B;  2AHW A;  3DLX A;  3EH7 A;  3RRL B;  1M3E A;  3K6M A;  1O9L A;  1XR4 A;  2NRC A;  3D3U A;  2OAS A;  5DBN A;  4KGB A;  2AHV A;  1POI A;  3CDK B;  3RRL A;  3QDQ A;  2AHU A;  3CDK A;  1OOY A;  1K6D A;  1OPE A;  2NRB A;  3OXO A;  5DBN B;  2HJ0 A;  1OOZ A; 
#chains in the Genus database with same CATH homology
 3GK7 A;  1POI B;  2AHW A;  3DLX A;  3EH7 A;  3RRL B;  1M3E A;  3K6M A;  1O9L A;  1XR4 A;  2NRC A;  3D3U A;  2OAS A;  5DBN A;  4KGB A;  2AHV A;  1POI A;  3CDK B;  3RRL A;  3QDQ A;  2AHU A;  3CDK A;  1OOY A;  1K6D A;  1OPE A;  2NRB A;  3OXO A;  5DBN B;  2HJ0 A;  1OOZ A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...