3PUWG

Crystal structure of an outward-facing mbp-maltose transporter complex bound to adp-alf4
Total Genus 96
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
96
sequence length
288
structure length
288
Chain Sequence
QKARLFITHLLLLLFIAAIMFPLLMVVAISLRQGNFATGSLIPEQISWDHWKLALGFSVEQADGRITPPPFPVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNTHGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNYLWGDFAAAAVMSALPITIVFLLAQRWLVNGLTAGGVKG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/transport protein
molecule keywords Maltose-binding periplasmic protein
publication title Snapshots of the maltose transporter during ATP hydrolysis.
pubmed doi rcsb
source organism Escherichia coli
total genus 96
structure length 288
sequence length 288
ec nomenclature
pdb deposition date 2010-12-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
G PF00528 BPD_transp_1 Binding-protein-dependent transport system inner membrane component
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.3720.10 Mainly Alpha Orthogonal Bundle MetI-like fold MetI-like 3puwG01
4KI0F 4YMTB 3TUIA 4TQUM 4YMUC 4XIGM 4KHZF 4KI0G 3PUZF 4JBWF 4XIGN 3PUXF 3PUZG 4TQUN 4KHZG 3PUYF 4JBWG 3RLFF 3PUXG 4XTCM 3PUYG 3RLFG 3PUVF 3PV0F 4XTCN 3PUWF 3TUZA 3PUVG 3PV0G 3TUJA 3DHWA 3PUWG 4YMSC 2R6GF 4YMWC 2R6GG 4YMVC 2ONKC 3D31C
chains in the Genus database with same CATH superfamily
4KI0F 4YMTB 3TUIA 4TQUM 4YMUC 4XIGM 4KHZF 4KI0G 3PUZF 4JBWF 4XIGN 3PUXF 3PUZG 4TQUN 4KHZG 3PUYF 4JBWG 3RLFF 3PUXG 4XTCM 3PUYG 3RLFG 3PUVF 3PV0F 4XTCN 3PUWF 3TUZA 3PUVG 3PV0G 3TUJA 3DHWA 3PUWG 4YMSC 2R6GF 4YMWC 2R6GG 4YMVC 2ONKC 3D31C
chains in the Genus database with same CATH topology
4KI0F 4YMTB 3TUIA 4TQUM 4YMUC 4XIGM 4KHZF 4KI0G 3PUZF 4JBWF 4XIGN 3PUXF 3PUZG 4TQUN 4KHZG 3PUYF 4JBWG 3RLFF 3PUXG 4XTCM 3PUYG 3RLFG 3PUVF 3PV0F 4XTCN 3PUWF 3TUZA 3PUVG 3PV0G 3TUJA 3DHWA 3PUWG 4YMSC 2R6GF 4YMWC 2R6GG 4YMVC 2ONKC 3D31C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4KI0 F;  4YMT B;  3TUI A;  4TQU M;  4YMU C;  4XIG M;  4KHZ F;  4KI0 G;  3PUZ F;  4JBW F;  4XIG N;  3PUX F;  3PUZ G;  4TQU N;  4KHZ G;  3PUY F;  4JBW G;  3RLF F;  3PUX G;  4XTC M;  3PUY G;  3RLF G;  3PUV F;  3PV0 F;  4XTC N;  3PUW F;  3TUZ A;  3PUV G;  3PV0 G;  3TUJ A;  3DHW A;  3PUW G;  4YMS C;  2R6G F;  4YMW C;  2R6G G;  4YMV C;  2ONK C;  3D31 C; 
#chains in the Genus database with same CATH topology
 4KI0 F;  4YMT B;  3TUI A;  4TQU M;  4YMU C;  4XIG M;  4KHZ F;  4KI0 G;  3PUZ F;  4JBW F;  4XIG N;  3PUX F;  3PUZ G;  4TQU N;  4KHZ G;  3PUY F;  4JBW G;  3RLF F;  3PUX G;  4XTC M;  3PUY G;  3RLF G;  3PUV F;  3PV0 F;  4XTC N;  3PUW F;  3TUZ A;  3PUV G;  3PV0 G;  3TUJ A;  3DHW A;  3PUW G;  4YMS C;  2R6G F;  4YMW C;  2R6G G;  4YMV C;  2ONK C;  3D31 C; 
#chains in the Genus database with same CATH homology
 4KI0 F;  4YMT B;  3TUI A;  4TQU M;  4YMU C;  4XIG M;  4KHZ F;  4KI0 G;  3PUZ F;  4JBW F;  4XIG N;  3PUX F;  3PUZ G;  4TQU N;  4KHZ G;  3PUY F;  4JBW G;  3RLF F;  3PUX G;  4XTC M;  3PUY G;  3RLF G;  3PUV F;  3PV0 F;  4XTC N;  3PUW F;  3TUZ A;  3PUV G;  3PV0 G;  3TUJ A;  3DHW A;  3PUW G;  4YMS C;  2R6G F;  4YMW C;  2R6G G;  4YMV C;  2ONK C;  3D31 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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