3QFKA

2.05 angstrom crystal structure of putative 5'-nucleotidase from staphylococcus aureus in complex with alpha-ketoglutarate
Total Genus 157
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
157
sequence length
510
structure length
510
Chain Sequence
SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRMAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMKRHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIAERFKQTAVIQPGTRGTTVGRVVLSTDEYENLSVESCELLPVIDDSTFTIDEDDQHLRKQLEDWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYALLEKSDADVACTALFDSASGFKQVVTMRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLEPKPQHFNYDIYGGVSYTIHVGRPKGQRVSNMMIQGHAVDLKQTYTICVNNYRAVGGGQYDMYIDAPVVKDIQVEGAQLLIDFLSNNNLMRIPQVVDFKVEK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title 2.05 Angstrom Crystal Structure of Putative 5'-Nucleotidase from Staphylococcus aureus in complex with alpha-ketoglutarate.
rcsb
source organism Staphylococcus aureus subsp. aureus
molecule tags Hydrolase
molecule keywords Uncharacterized protein
total genus 157
structure length 510
sequence length 510
ec nomenclature
pdb deposition date 2011-01-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
A PF02872 5_nucleotid_C 5'-nucleotidase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 3qfkA01
3.90.780.10 Alpha Beta Alpha-Beta Complex 5'-nucleotidase; domain 2 5'-Nucleotidase, C-terminal domain 3qfkA02
2XMOA 4IYPC 4FBQA 4FBWA 4UT2A 3C5WC 4KKZA 3FGAC 5EQVA 2WDFA 4UT3B 4JA7A 2IE4C 3K7VC 1XM7A 3H62B 3H63A 3LL8A 2HYOA 3H68A 4LACC 4I5NC 1S8EA 2P6BA 3THNA 5HPEA 1NNWA 4MOVA 4H2GA 1OIDA 4MP0A 1WARA 2R17A 3H60A 4FBKA 3P71C 4H1YP 1KBPA 4TUIA 4NZVA 3IB8A 3GVEA 4KBPA 1UTEA 5C1VA 3V4YA 2QFPA 3IVDA 2NYLC 2HYPA 1U32A 1QHWA 2WDDA 2GJUA 3CK2A 1Z2XA 2JOGA 2NPPC 1M63A 2BDXA 4HD0A 3QFMA 2ZBMA 5J28A 3H67A 1WAO1 2IAEC 4H2FA 3N5UA 3ICFA 3C9FA 4MOYA 3HVQA 2Z1AA 4UT3A 1II7A 4I5LC 3KBPA 5IOHA 5JJTA 1SU1A 4ORBA 4V0VA 1OI8A 3E7BA 5JPEA 1T71A 1S3NA 1HPUA 4IL1A 4WWLA 4O24A 1S95A 3H69A 1S3LA 1XZWA 2BCDA 4LTYA 3RQZA 2NYMC 3RL4A 4ZX2A 1HO5A 3ZU0A 1AUIA 3E7AA 3THOB 1OIEA 2NXFA 2O8AA 4JA9A 1MF8A 2AHDA 4H2IA 1TCOA 4YKEA 2O8GA 2USHA 2HY1A 5INBA 3EGGA 5JPFA 3RL3A 1USHA 3IVEA 1FJMA 3AUZA 3K7WC 4Q7FA 4FCXA 4UWQA 4XPNA 3JYFA 4B2OA 1T70A 1V73A 4DT2A 2Q8UA 4O43A 3IB7A 4J6OA 4O4KA 1S3MA 1HP1A 1UF3A 2WDCA 3DW8C 3H64A 3PSNA 3H61A 4TUGA 4ORCA 5GTUA 2QFRA 1IT6A 2DFJA 3QFOA 1G5BA 3DSCA 4LU9A 3AV0A 2A22A 3RL5A 3QG5C 3DSDA 5F3WA 3H66A 4O5GA 3TGHA 4M0VA 4V0WA 4G9JA 1Z2WA 4DHLA 1QFCA 1S70A 2IE3C 2YVTA 4H1SA 5DNYA 3ZTVA 4ORAA 3T1IA 3EGHA 2KKNA 4V0XA 2BQ8X 2Z06A 1W24A 4OR9A 1JK7A 2CV9A 3PSOA 2QJCA 2WDEA 2Z72A 3QFKA 4H2BA 4ZVZA 3QFNA 5B8IA 4DSYA 4F0ZA
chains in the Genus database with same CATH superfamily
2XMOA 4IYPC 4FBQA 4FBWA 4UT2A 3C5WC 2DXNA 4KKZA 3FGAC 5EQVA 2WDFA 4UT3B 4JA7A 2IE4C 3K7VC 1XM7A 3H62B 3H63A 3LL8A 2HYOA 3H68A 4LACC 4I5NC 1S8EA 2P6BA 3THNA 5HPEA 1NNWA 2YEQA 4MOVA 4H2GA 1OIDA 4MP0A 1WARA 2R17A 3H60A 4FBKA 3P71C 4H1YP 1KBPA 4TUIA 4NZVA 3IB8A 3GVEA 4KBPA 1UTEA 5C1VA 3V4YA 2QFPA 3IVDA 2NYLC 2HYPA 1U32A 1QHWA 2WDDA 2GJUA 3CK2A 1Z2XA 2JOGA 2NPPC 1M63A 3E0JA 2BDXA 4HD0A 3QFMA 2ZOAA 2ZBMA 5J28A 3H67A 1WAO1 2IAEC 4H2FA 3N5UA 3ICFA 3C9FA 4MOYA 3HVQA 2Z1AA 4UT3A 1II7A 4I5LC 3KBPA 5IOHA 5JJTA 1SU1A 4ORBA 4V0VA 1OI8A 3E7BA 5JPEA 1T71A 1S3NA 1HPUA 4IL1A 4WWLA 4O24A 1S95A 3H69A 1S3LA 1XZWA 2BCDA 4LTYA 3RQZA 2NYMC 3RL4A 4ZX2A 1HO5A 3ZU0A 1AUIA 3E7AA 3THOB 1OIEA 2NXFA 2O8AA 3FLOA 4JA9A 1MF8A 2AHDA 4H2IA 1TCOA 4YKEA 2O8GA 2USHA 2HY1A 5INBA 3EGGA 5JPFA 3RL3A 1USHA 3IVEA 1FJMA 2DXLA 3AUZA 3K7WC 4FCXA 4Q7FA 4UWQA 4XPNA 3JYFA 4B2OA 1T70A 1V73A 4DT2A 2Q8UA 4O43A 3IB7A 4J6OA 4O4KA 1S3MA 1HP1A 1UF3A 2WDCA 3DW8C 3H64A 3PSNA 3H61A 4TUGA 4ORCA 5GTUA 2QFRA 1IT6A 2DFJA 3QFOA 1G5BA 3DSCA 4LU9A 3AV0A 2A22A 3RL5A 3QG5C 3DSDA 5F3WA 3D03A 3H66A 4O5GA 3TGHA 4M0VA 4V0WA 4G9JA 1Z2WA 4DHLA 1QFCA 2ZO9B 1S70A 2IE3C 2YVTA 4H1SA 5DNYA 3ZTVA 4ORAA 3T1IA 3EGHA 2KKNA 4V0XA 2BQ8X 2Z06A 1W24A 4OR9A 1JK7A 2CV9A 3PSOA 2QJCA 2WDEA 2Z72A 3QFKA 4H2BA 4ZVZA 3QFNA 5B8IA 4DSYA 4F0ZA
chains in the Genus database with same CATH topology
2XMOA 4IYPC 4FBQA 4FBWA 4UT2A 3C5WC 2DXNA 4KKZA 3FGAC 5EQVA 2WDFA 4UT3B 4JA7A 2IE4C 3K7VC 1XM7A 3H62B 3H63A 3LL8A 2HYOA 3H68A 4LACC 4I5NC 1S8EA 2P6BA 3THNA 5HPEA 1NNWA 2YEQA 4MOVA 4H2GA 1OIDA 4MP0A 1WARA 2R17A 3H60A 4FBKA 3P71C 4H1YP 1KBPA 4TUIA 4NZVA 3IB8A 3GVEA 4KBPA 1UTEA 5C1VA 3V4YA 2QFPA 3IVDA 2NYLC 2HYPA 1U32A 1QHWA 2WDDA 2GJUA 3CK2A 1Z2XA 2JOGA 2NPPC 1M63A 3E0JA 2BDXA 4HD0A 3QFMA 2ZOAA 2ZBMA 5J28A 3H67A 1WAO1 2IAEC 4H2FA 3N5UA 3ICFA 3C9FA 4MOYA 3HVQA 2Z1AA 4UT3A 1II7A 4I5LC 3KBPA 5IOHA 5JJTA 1SU1A 4ORBA 4V0VA 1OI8A 3E7BA 5JPEA 1T71A 1S3NA 1HPUA 4IL1A 4WWLA 4O24A 1S95A 3H69A 1S3LA 1XZWA 2BCDA 4LTYA 3RQZA 2NYMC 3RL4A 4ZX2A 1HO5A 3ZU0A 1AUIA 3E7AA 3THOB 1OIEA 2NXFA 2O8AA 3FLOA 4JA9A 1MF8A 2AHDA 4H2IA 1TCOA 4YKEA 2O8GA 2USHA 2HY1A 5INBA 3EGGA 5JPFA 3RL3A 1USHA 3IVEA 1FJMA 2DXLA 3AUZA 3K7WC 4FCXA 4Q7FA 4UWQA 4XPNA 3JYFA 4B2OA 1T70A 1V73A 4DT2A 2Q8UA 4O43A 3IB7A 4J6OA 4O4KA 1S3MA 1HP1A 1UF3A 2WDCA 3DW8C 3H64A 3PSNA 3H61A 4TUGA 4ORCA 5GTUA 2QFRA 1IT6A 2DFJA 3QFOA 1G5BA 3DSCA 4LU9A 3AV0A 2A22A 3RL5A 3QG5C 3DSDA 5F3WA 3D03A 3H66A 4O5GA 3TGHA 4M0VA 4V0WA 4G9JA 1Z2WA 4DHLA 1QFCA 2ZO9B 1S70A 2IE3C 2YVTA 4H1SA 5DNYA 3ZTVA 4ORAA 3T1IA 3EGHA 2KKNA 4V0XA 2BQ8X 2Z06A 1W24A 4OR9A 1JK7A 2CV9A 3PSOA 2QJCA 2WDEA 2Z72A 3QFKA 4H2BA 4ZVZA 3QFNA 5B8IA 4DSYA 4F0ZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2XMO A;  4IYP C;  4FBQ A;  4FBW A;  4UT2 A;  3C5W C;  4KKZ A;  3FGA C;  5EQV A;  2WDF A;  4UT3 B;  4JA7 A;  2IE4 C;  3K7V C;  1XM7 A;  3H62 B;  3H63 A;  3LL8 A;  2HYO A;  3H68 A;  4LAC C;  4I5N C;  1S8E A;  2P6B A;  3THN A;  5HPE A;  1NNW A;  4MOV A;  4H2G A;  1OID A;  4MP0 A;  1WAR A;  2R17 A;  3H60 A;  4FBK A;  3P71 C;  4H1Y P;  1KBP A;  4TUI A;  4NZV A;  3IB8 A;  3GVE A;  4KBP A;  1UTE A;  5C1V A;  3V4Y A;  2QFP A;  3IVD A;  2NYL C;  2HYP A;  1U32 A;  1QHW A;  2WDD A;  2GJU A;  3CK2 A;  1Z2X A;  2JOG A;  2NPP C;  1M63 A;  2BDX A;  4HD0 A;  3QFM A;  2ZBM A;  5J28 A;  3H67 A;  1WAO 1;  2IAE C;  4H2F A;  3N5U A;  3ICF A;  3C9F A;  4MOY A;  3HVQ A;  2Z1A A;  4UT3 A;  1II7 A;  4I5L C;  3KBP A;  5IOH A;  5JJT A;  1SU1 A;  4ORB A;  4V0V A;  1OI8 A;  3E7B A;  5JPE A;  1T71 A;  1S3N A;  1HPU A;  4IL1 A;  4WWL A;  4O24 A;  1S95 A;  3H69 A;  1S3L A;  1XZW A;  2BCD A;  4LTY A;  3RQZ A;  2NYM C;  3RL4 A;  4ZX2 A;  1HO5 A;  3ZU0 A;  1AUI A;  3E7A A;  3THO B;  1OIE A;  2NXF A;  2O8A A;  4JA9 A;  1MF8 A;  2AHD A;  4H2I A;  1TCO A;  4YKE A;  2O8G A;  2USH A;  2HY1 A;  5INB A;  3EGG A;  5JPF A;  3RL3 A;  1USH A;  3IVE A;  1FJM A;  3AUZ A;  3K7W C;  4Q7F A;  4FCX A;  4UWQ A;  4XPN A;  3JYF A;  4B2O A;  1T70 A;  1V73 A;  4DT2 A;  2Q8U A;  4O43 A;  3IB7 A;  4J6O A;  4O4K A;  1S3M A;  1HP1 A;  1UF3 A;  2WDC A;  3DW8 C;  3H64 A;  3PSN A;  3H61 A;  4TUG A;  4ORC A;  5GTU A;  2QFR A;  1IT6 A;  2DFJ A;  3QFO A;  1G5B A;  3DSC A;  4LU9 A;  3AV0 A;  2A22 A;  3RL5 A;  3QG5 C;  3DSD A;  5F3W A;  3H66 A;  4O5G A;  3TGH A;  4M0V A;  4V0W A;  4G9J A;  1Z2W A;  4DHL A;  1QFC A;  1S70 A;  2IE3 C;  2YVT A;  4H1S A;  5DNY A;  3ZTV A;  4ORA A;  3T1I A;  3EGH A;  2KKN A;  4V0X A;  2BQ8 X;  2Z06 A;  1W24 A;  4OR9 A;  1JK7 A;  2CV9 A;  3PSO A;  2QJC A;  2WDE A;  2Z72 A;  3QFK A;  4H2B A;  4ZVZ A;  3QFN A;  5B8I A;  4DSY A;  4F0Z A; 
#chains in the Genus database with same CATH topology
 2XMO A;  4IYP C;  4FBQ A;  4FBW A;  4UT2 A;  3C5W C;  2DXN A;  4KKZ A;  3FGA C;  5EQV A;  2WDF A;  4UT3 B;  4JA7 A;  2IE4 C;  3K7V C;  1XM7 A;  3H62 B;  3H63 A;  3LL8 A;  2HYO A;  3H68 A;  4LAC C;  4I5N C;  1S8E A;  2P6B A;  3THN A;  5HPE A;  1NNW A;  2YEQ A;  4MOV A;  4H2G A;  1OID A;  4MP0 A;  1WAR A;  2R17 A;  3H60 A;  4FBK A;  3P71 C;  4H1Y P;  1KBP A;  4TUI A;  4NZV A;  3IB8 A;  3GVE A;  4KBP A;  1UTE A;  5C1V A;  3V4Y A;  2QFP A;  3IVD A;  2NYL C;  2HYP A;  1U32 A;  1QHW A;  2WDD A;  2GJU A;  3CK2 A;  1Z2X A;  2JOG A;  2NPP C;  1M63 A;  3E0J A;  2BDX A;  4HD0 A;  3QFM A;  2ZOA A;  2ZBM A;  5J28 A;  3H67 A;  1WAO 1;  2IAE C;  4H2F A;  3N5U A;  3ICF A;  3C9F A;  4MOY A;  3HVQ A;  2Z1A A;  4UT3 A;  1II7 A;  4I5L C;  3KBP A;  5IOH A;  5JJT A;  1SU1 A;  4ORB A;  4V0V A;  1OI8 A;  3E7B A;  5JPE A;  1T71 A;  1S3N A;  1HPU A;  4IL1 A;  4WWL A;  4O24 A;  1S95 A;  3H69 A;  1S3L A;  1XZW A;  2BCD A;  4LTY A;  3RQZ A;  2NYM C;  3RL4 A;  4ZX2 A;  1HO5 A;  3ZU0 A;  1AUI A;  3E7A A;  3THO B;  1OIE A;  2NXF A;  2O8A A;  3FLO A;  4JA9 A;  1MF8 A;  2AHD A;  4H2I A;  1TCO A;  4YKE A;  2O8G A;  2USH A;  2HY1 A;  5INB A;  3EGG A;  5JPF A;  3RL3 A;  1USH A;  3IVE A;  1FJM A;  2DXL A;  3AUZ A;  3K7W C;  4FCX A;  4Q7F A;  4UWQ A;  4XPN A;  3JYF A;  4B2O A;  1T70 A;  1V73 A;  4DT2 A;  2Q8U A;  4O43 A;  3IB7 A;  4J6O A;  4O4K A;  1S3M A;  1HP1 A;  1UF3 A;  2WDC A;  3DW8 C;  3H64 A;  3PSN A;  3H61 A;  4TUG A;  4ORC A;  5GTU A;  2QFR A;  1IT6 A;  2DFJ A;  3QFO A;  1G5B A;  3DSC A;  4LU9 A;  3AV0 A;  2A22 A;  3RL5 A;  3QG5 C;  3DSD A;  5F3W A;  3D03 A;  3H66 A;  4O5G A;  3TGH A;  4M0V A;  4V0W A;  4G9J A;  1Z2W A;  4DHL A;  1QFC A;  2ZO9 B;  1S70 A;  2IE3 C;  2YVT A;  4H1S A;  5DNY A;  3ZTV A;  4ORA A;  3T1I A;  3EGH A;  2KKN A;  4V0X A;  2BQ8 X;  2Z06 A;  1W24 A;  4OR9 A;  1JK7 A;  2CV9 A;  3PSO A;  2QJC A;  2WDE A;  2Z72 A;  3QFK A;  4H2B A;  4ZVZ A;  3QFN A;  5B8I A;  4DSY A;  4F0Z A; 
#chains in the Genus database with same CATH homology
 2XMO A;  4IYP C;  4FBQ A;  4FBW A;  4UT2 A;  3C5W C;  2DXN A;  4KKZ A;  3FGA C;  5EQV A;  2WDF A;  4UT3 B;  4JA7 A;  2IE4 C;  3K7V C;  1XM7 A;  3H62 B;  3H63 A;  3LL8 A;  2HYO A;  3H68 A;  4LAC C;  4I5N C;  1S8E A;  2P6B A;  3THN A;  5HPE A;  1NNW A;  2YEQ A;  4MOV A;  4H2G A;  1OID A;  4MP0 A;  1WAR A;  2R17 A;  3H60 A;  4FBK A;  3P71 C;  4H1Y P;  1KBP A;  4TUI A;  4NZV A;  3IB8 A;  3GVE A;  4KBP A;  1UTE A;  5C1V A;  3V4Y A;  2QFP A;  3IVD A;  2NYL C;  2HYP A;  1U32 A;  1QHW A;  2WDD A;  2GJU A;  3CK2 A;  1Z2X A;  2JOG A;  2NPP C;  1M63 A;  3E0J A;  2BDX A;  4HD0 A;  3QFM A;  2ZOA A;  2ZBM A;  5J28 A;  3H67 A;  1WAO 1;  2IAE C;  4H2F A;  3N5U A;  3ICF A;  3C9F A;  4MOY A;  3HVQ A;  2Z1A A;  4UT3 A;  1II7 A;  4I5L C;  3KBP A;  5IOH A;  5JJT A;  1SU1 A;  4ORB A;  4V0V A;  1OI8 A;  3E7B A;  5JPE A;  1T71 A;  1S3N A;  1HPU A;  4IL1 A;  4WWL A;  4O24 A;  1S95 A;  3H69 A;  1S3L A;  1XZW A;  2BCD A;  4LTY A;  3RQZ A;  2NYM C;  3RL4 A;  4ZX2 A;  1HO5 A;  3ZU0 A;  1AUI A;  3E7A A;  3THO B;  1OIE A;  2NXF A;  2O8A A;  3FLO A;  4JA9 A;  1MF8 A;  2AHD A;  4H2I A;  1TCO A;  4YKE A;  2O8G A;  2USH A;  2HY1 A;  5INB A;  3EGG A;  5JPF A;  3RL3 A;  1USH A;  3IVE A;  1FJM A;  2DXL A;  3AUZ A;  3K7W C;  4FCX A;  4Q7F A;  4UWQ A;  4XPN A;  3JYF A;  4B2O A;  1T70 A;  1V73 A;  4DT2 A;  2Q8U A;  4O43 A;  3IB7 A;  4J6O A;  4O4K A;  1S3M A;  1HP1 A;  1UF3 A;  2WDC A;  3DW8 C;  3H64 A;  3PSN A;  3H61 A;  4TUG A;  4ORC A;  5GTU A;  2QFR A;  1IT6 A;  2DFJ A;  3QFO A;  1G5B A;  3DSC A;  4LU9 A;  3AV0 A;  2A22 A;  3RL5 A;  3QG5 C;  3DSD A;  5F3W A;  3D03 A;  3H66 A;  4O5G A;  3TGH A;  4M0V A;  4V0W A;  4G9J A;  1Z2W A;  4DHL A;  1QFC A;  2ZO9 B;  1S70 A;  2IE3 C;  2YVT A;  4H1S A;  5DNY A;  3ZTV A;  4ORA A;  3T1I A;  3EGH A;  2KKN A;  4V0X A;  2BQ8 X;  2Z06 A;  1W24 A;  4OR9 A;  1JK7 A;  2CV9 A;  3PSO A;  2QJC A;  2WDE A;  2Z72 A;  3QFK A;  4H2B A;  4ZVZ A;  3QFN A;  5B8I A;  4DSY A;  4F0Z A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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