3QN0A

Structure of 6-pyruvoyltetrahydropterin synthase
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
117
structure length
117
Chain Sequence
STTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase
molecule keywords 6-carboxy-5,6,7,8-tetrahydropterin synthase
publication title Structural basis of a novel activity of bacterial 6-pyruvoyltetrahydropterin synthase homologues distinct from mammalian 6-pyruvoyltetrahydropterin synthase activity.
pubmed doi rcsb
source organism Escherichia coli
total genus 28
structure length 117
sequence length 117
chains with identical sequence B, C, D, E, F
ec nomenclature ec 4.1.2.50: 6-carboxytetrahydropterin synthase.
pdb deposition date 2011-02-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01242 PTPS 6-pyruvoyl tetrahydropterin synthase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.479.10 Alpha Beta 2-Layer Sandwich Tetrahydropterin Synthase; Chain A Tetrahydropterin Synthase; Chain A 3qn0A00
1B6ZA 4NTKA 3LX3A 2DJ6A 2A0SA 3QN9A 4NTMA 1Y13A 3QNAA 1GTQA 3I2BA 3M0NA 3D7JA 2G64A 4NTNA 2OBAA 2DTTA 3LZEA 3QN0A 3JYGA 1B66A
chains in the Genus database with same CATH superfamily
1B6ZA 4NTKA 2RPBA 4FVGA 1XB2B 3LX3A 2DJ6A 2A0SA 3BK6A 3QN9A 4NTMA 1AIPC 4Q7JA 1Y13A 3QNAA 1GTQA 3I2BA 1TFEA 3M0NA 3D7JA 1B66A 2G64A 4NTNA 2OBAA 1EFUB 2DTTA 3LZEA 3QN0A 4FVFA 3JYGA 4FVJA 1WINA
chains in the Genus database with same CATH topology
1B6ZA 4NTKA 2RPBA 4FVGA 3LX3A 2DJ6A 2A0SA 3BK6A 3QN9A 4NTMA 1Y13A 3QNAA 1GTQA 3I2BA 3M0NA 3D7JA 2G64A 4NTNA 2OBAA 2DTTA 3LZEA 3QN0A 4FVFA 1WINA 3JYGA 4FVJA 1B66A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1B6Z A;  4NTK A;  3LX3 A;  2DJ6 A;  2A0S A;  3QN9 A;  4NTM A;  1Y13 A;  3QNA A;  1GTQ A;  3I2B A;  3M0N A;  3D7J A;  2G64 A;  4NTN A;  2OBA A;  2DTT A;  3LZE A;  3QN0 A;  3JYG A;  1B66 A; 
#chains in the Genus database with same CATH topology
 1B6Z A;  4NTK A;  2RPB A;  4FVG A;  1XB2 B;  3LX3 A;  2DJ6 A;  2A0S A;  3BK6 A;  3QN9 A;  4NTM A;  1AIP C;  4Q7J A;  1Y13 A;  3QNA A;  1GTQ A;  3I2B A;  1TFE A;  3M0N A;  3D7J A;  1B66 A;  2G64 A;  4NTN A;  2OBA A;  1EFU B;  2DTT A;  3LZE A;  3QN0 A;  4FVF A;  3JYG A;  4FVJ A;  1WIN A; 
#chains in the Genus database with same CATH homology
 1B6Z A;  4NTK A;  2RPB A;  4FVG A;  3LX3 A;  2DJ6 A;  2A0S A;  3BK6 A;  3QN9 A;  4NTM A;  1Y13 A;  3QNA A;  1GTQ A;  3I2B A;  3M0N A;  3D7J A;  2G64 A;  4NTN A;  2OBA A;  2DTT A;  3LZE A;  3QN0 A;  4FVF A;  1WIN A;  3JYG A;  4FVJ A;  1B66 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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