3QR9A

Anthranilate phosphoribosyltransferase (trpd) from mycobacterium tuberculosis (apo structure)
Total Genus 124
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
124
sequence length
347
structure length
347
Chain Sequence
PSWPQILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGAIVAHAGLSSRAEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQIL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Anthranilate phosphoribosyltransferase
publication title The Substrate Capture Mechanism of Mycobacterium tuberculosis Anthranilate Phosphoribosyltransferase Provides a Mode for Inhibition.
pubmed doi rcsb
source organism Mycobacterium tuberculosis
total genus 124
structure length 347
sequence length 347
chains with identical sequence B
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2011-02-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 3qr9A01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 3qr9A02
4OWQA 1BRWA 1V8GA 4EADA 4EAFA 5C7SA 4OWUA 4M0RA 4YI7A 4YYYA 4ZOFA 4ZOJA 5EP8A 4MUOA 1ZVWA 5BNEA 4OWSA 1O17A 4OWOA 5C1RA 2DSJA 4LHMA 4HKMA 3QQSA 4GTNA 2WK6A 3R88A 3UU1A 4X5AA 4OWVA 4N93A 4GA5A 4X58A 5BO2A 3QSAA 4GKMA 4N5VA 5EY3A 2GVQA 4GIUA 4GA6A 2ELCA 4X46A 4ZOKA 4IJ1A 4X5EA 2J0FA 4YEKA 1OTPA 4XR5A 4ZTVA 1KHDA 1AZYA 5BO3A 4N8QA 1UOUA 5C2LA 1ZYKA 4X5BA 4X5DA 1GXBA 3TWPA 4OWMA 4GA4A 1ZXYA 4X5CA 4OWNA 3QR9A 3QS8A 2WK5A 2BPQA 3H5QA 3R6CA 1VQUA 2TPTA 3GBRA 5BYTA 1KGZA 4X59A
chains in the Genus database with same CATH superfamily
4OWQA 1BRWA 1V8GA 4EADA 4EAFA 5C7SA 4OWUA 4M0RA 4YI7A 4YYYA 1RF8B 4ZOFA 4ZOJA 5EP8A 4MUOA 1ZVWA 5BNEA 4OWSA 1O17A 4OWOA 5C1RA 2DSJA 4LHMA 4HKMA 3QQSA 4GTNA 2WK6A 3R88A 3UU1A 4X5AA 4OWVA 4N93A 4GA5A 4X58A 5BO2A 3QSAA 4GKMA 4N5VA 5EY3A 2GVQA 4GA6A 4GIUA 2ELCA 4X46A 4ZOKA 4F3FC 4IJ1A 4X5EA 2J0FA 4YEKA 1OTPA 4XR5A 4ZTVA 1RRZA 1KHDA 1AZYA 5BO3A 4N8QA 1UOUA 5C2LA 1ZYKA 4X5BA 4X5DA 1GXBA 3TWPA 4OWMA 4GA4A 1ZXYA 4X5CA 4OWNA 3QR9A 3QS8A 2WK5A 2BPQA 3H5QA 3R6CA 1VQUA 2TPTA 3GBRA 5BYTA 1KGZA 4X59A
chains in the Genus database with same CATH topology
4OWQA 1BRWA 1V8GA 4EADA 4EAFA 5C7SA 4OWUA 4M0RA 4YI7A 4YYYA 4ZOFA 4ZOJA 5EP8A 4MUOA 1ZVWA 5BNEA 4OWSA 1O17A 4OWOA 5C1RA 2DSJA 4LHMA 4HKMA 3QQSA 4GTNA 2WK6A 3R88A 3UU1A 4X5AA 4OWVA 4N93A 4GA5A 4X58A 5BO2A 3QSAA 4GKMA 4N5VA 5EY3A 2GVQA 4GIUA 4GA6A 2ELCA 4X46A 4ZOKA 4IJ1A 4X5EA 2J0FA 4YEKA 1OTPA 4XR5A 4ZTVA 1KHDA 1AZYA 5BO3A 4N8QA 1UOUA 5C2LA 1ZYKA 4X5BA 4X5DA 1GXBA 3TWPA 4OWMA 4GA4A 1ZXYA 4X5CA 4OWNA 3QR9A 3QS8A 2WK5A 2BPQA 3H5QA 3R6CA 1VQUA 2TPTA 3GBRA 5BYTA 1KGZA 4X59A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4OWQ A;  1BRW A;  1V8G A;  4EAD A;  4EAF A;  5C7S A;  4OWU A;  4M0R A;  4YI7 A;  4YYY A;  4ZOF A;  4ZOJ A;  5EP8 A;  4MUO A;  1ZVW A;  5BNE A;  4OWS A;  1O17 A;  4OWO A;  5C1R A;  2DSJ A;  4LHM A;  4HKM A;  3QQS A;  4GTN A;  2WK6 A;  3R88 A;  3UU1 A;  4X5A A;  4OWV A;  4N93 A;  4GA5 A;  4X58 A;  5BO2 A;  3QSA A;  4GKM A;  4N5V A;  5EY3 A;  2GVQ A;  4GIU A;  4GA6 A;  2ELC A;  4X46 A;  4ZOK A;  4IJ1 A;  4X5E A;  2J0F A;  4YEK A;  1OTP A;  4XR5 A;  4ZTV A;  1KHD A;  1AZY A;  5BO3 A;  4N8Q A;  1UOU A;  5C2L A;  1ZYK A;  4X5B A;  4X5D A;  1GXB A;  3TWP A;  4OWM A;  4GA4 A;  1ZXY A;  4X5C A;  4OWN A;  3QR9 A;  3QS8 A;  2WK5 A;  2BPQ A;  3H5Q A;  3R6C A;  1VQU A;  2TPT A;  3GBR A;  5BYT A;  1KGZ A;  4X59 A; 
#chains in the Genus database with same CATH topology
 4OWQ A;  1BRW A;  1V8G A;  4EAD A;  4EAF A;  5C7S A;  4OWU A;  4M0R A;  4YI7 A;  4YYY A;  1RF8 B;  4ZOF A;  4ZOJ A;  5EP8 A;  4MUO A;  1ZVW A;  5BNE A;  4OWS A;  1O17 A;  4OWO A;  5C1R A;  2DSJ A;  4LHM A;  4HKM A;  3QQS A;  4GTN A;  2WK6 A;  3R88 A;  3UU1 A;  4X5A A;  4OWV A;  4N93 A;  4GA5 A;  4X58 A;  5BO2 A;  3QSA A;  4GKM A;  4N5V A;  5EY3 A;  2GVQ A;  4GA6 A;  4GIU A;  2ELC A;  4X46 A;  4ZOK A;  4F3F C;  4IJ1 A;  4X5E A;  2J0F A;  4YEK A;  1OTP A;  4XR5 A;  4ZTV A;  1RRZ A;  1KHD A;  1AZY A;  5BO3 A;  4N8Q A;  1UOU A;  5C2L A;  1ZYK A;  4X5B A;  4X5D A;  1GXB A;  3TWP A;  4OWM A;  4GA4 A;  1ZXY A;  4X5C A;  4OWN A;  3QR9 A;  3QS8 A;  2WK5 A;  2BPQ A;  3H5Q A;  3R6C A;  1VQU A;  2TPT A;  3GBR A;  5BYT A;  1KGZ A;  4X59 A; 
#chains in the Genus database with same CATH homology
 4OWQ A;  1BRW A;  1V8G A;  4EAD A;  4EAF A;  5C7S A;  4OWU A;  4M0R A;  4YI7 A;  4YYY A;  4ZOF A;  4ZOJ A;  5EP8 A;  4MUO A;  1ZVW A;  5BNE A;  4OWS A;  1O17 A;  4OWO A;  5C1R A;  2DSJ A;  4LHM A;  4HKM A;  3QQS A;  4GTN A;  2WK6 A;  3R88 A;  3UU1 A;  4X5A A;  4OWV A;  4N93 A;  4GA5 A;  4X58 A;  5BO2 A;  3QSA A;  4GKM A;  4N5V A;  5EY3 A;  2GVQ A;  4GIU A;  4GA6 A;  2ELC A;  4X46 A;  4ZOK A;  4IJ1 A;  4X5E A;  2J0F A;  4YEK A;  1OTP A;  4XR5 A;  4ZTV A;  1KHD A;  1AZY A;  5BO3 A;  4N8Q A;  1UOU A;  5C2L A;  1ZYK A;  4X5B A;  4X5D A;  1GXB A;  3TWP A;  4OWM A;  4GA4 A;  1ZXY A;  4X5C A;  4OWN A;  3QR9 A;  3QS8 A;  2WK5 A;  2BPQ A;  3H5Q A;  3R6C A;  1VQU A;  2TPT A;  3GBR A;  5BYT A;  1KGZ A;  4X59 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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