3QW7A

Crystal structure of the protease domain of botulinum neurotoxin serotype a with a peptide inhibitor rrfc
Total Genus 146
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
146
sequence length
422
structure length
422
Chain Sequence
PFVNKQFNYKDPVNGVDIAYIKIPNAGQMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEAKQVPVSYYDSTYLSTDNEKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQFECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGAGKFATDPAVTLAHELIHAGHRLYGIAINPNRVFKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYLLSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFNGQNTEINNMNFTKLKNFTGLF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Botulinum neurotoxin type A
publication title Peptide inhibitors of botulinum neurotoxin serotype A: design, inhibition, cocrystal structures, structure-activity relationship and pharmacophore modeling.
pubmed doi rcsb
source organism Clostridium botulinum
total genus 146
structure length 422
sequence length 422
ec nomenclature ec 3.4.24.69: Bontoxilysin.
pdb deposition date 2011-02-27
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1240.10 Alpha Beta Alpha-Beta Complex Zincin-like Metalloproteases ("zincins"), catalytic domain like 3qw7A00
3FFZA 4J1LA 5BQMA 2ILPA 3VUOA 3D3XA 1XTFA 3DDAA 2G7KA 5BQNA 3V0AA 1F82A 1F31A 3QIZA 2W2DA 1G9BA 1S0EA 1I1EA 2ISHA 1YVGA 3C88A 3DSEA 3ZURA 3QW8A 4ZJXA 3DEBA 1S0FA 1G9AA 1ZB7A 1ZKWA 3BOOA 3FIEA 1S0GA 1E1HA 4KS6A 1ZL6A 3QW6A 2FPQA 2NP0A 3QJ0A 3ZUSA 2NYYA 1G9DA 3FIIA 1G9CA 2G7QA 1ZL5A 1S0BA 1T3AA 3C8BA 3QIYA 1Z7HA 2IMBA 4EJ5A 1XTGA 2A97A 3BOKA 3C89A 2QN0A 3C8AA 3DDBA 1S0CA 3DS9A 4EL4A 2ISGA 2XHLA 3V0BB 3BWIA 1T3CA 2G7NA 3QW5A 4KUFA 4KTXA 2IMCA 1S0DA 2A8AA 2IMAA 3NF3A 2ETFA 3BONA 2G7PA 1ZKXA 1ZN3A 3ZUQA 2ISEA 3QW7A 3V0AB 3V0BA 3BTAA 4ELCA 3K3QB 3QIXA 2NZ9A 4ZKTB 4HEVA 1EPWA
chains in the Genus database with same CATH superfamily
3FFZA 4J1LA 5BQMA 2ILPA 3VUOA 3D3XA 1XTFA 4QHFA 3DDAA 2G7KA 5BQNA 3V0AA 1F82A 1F31A 3QIZA 2W2DA 1G9BA 1S0EA 1I1EA 2ISHA 1YVGA 3C88A 3DSEA 4IL3A 3ZURA 3QW8A 3DEBA 1S0FA 4ZJXA 1G9AA 1ZB7A 4JIUA 1ZKWA 3BOOA 2EJQA 3FIEA 4JIXA 1S0GA 1E1HA 4KS6A 1ZL6A 3QW6A 2FPQA 2NP0A 3QJ0A 3ZUSA 2NYYA 1G9DA 3FIIA 1G9CA 4AW6A 2G7QA 1ZL5A 1S0BA 1T3AA 3C8BA 3QIYA 1Z7HA 2IMBA 4EJ5A 1XTGA 2A97A 3BOKA 3C89A 2QN0A 3C8AA 3DDBA 1S0CA 3DS9A 3E11A 4EL4A 2ISGA 2XHLA 3V0BB 3BWIA 1T3CA 2G7NA 3QW5A 4KUFA 4KTXA 2IMCA 1S0DA 2A8AA 2IMAA 3NF3A 2ETFA 3BONA 2G7PA 1ZKXA 1ZN3A 3ZUQA 2ISEA 3QW7A 3V0AB 3V0BA 3BTAA 4ELCA 3K3QB 3CQBA 2YPTA 3QIXA 2NZ9A 4ZKTB 4HEVA 1EPWA
chains in the Genus database with same CATH topology
3FFZA 4J1LA 5BQMA 2ILPA 3VUOA 3D3XA 1XTFA 3DDAA 2G7KA 5BQNA 3V0AA 1F82A 1F31A 3QIZA 2W2DA 1G9BA 1S0EA 1I1EA 2ISHA 1YVGA 3C88A 3DSEA 3ZURA 3QW8A 4ZJXA 3DEBA 1S0FA 1G9AA 1ZB7A 1ZKWA 3BOOA 3FIEA 1S0GA 1E1HA 4KS6A 1ZL6A 3QW6A 2FPQA 2NP0A 3QJ0A 3ZUSA 2NYYA 1G9DA 3FIIA 1G9CA 2G7QA 1ZL5A 1S0BA 1T3AA 3C8BA 3QIYA 1Z7HA 2IMBA 4EJ5A 1XTGA 2A97A 3BOKA 3C89A 2QN0A 3C8AA 3DDBA 1S0CA 3DS9A 4EL4A 2ISGA 2XHLA 3V0BB 3BWIA 1T3CA 2G7NA 3QW5A 4KUFA 4KTXA 2IMCA 1S0DA 2A8AA 2IMAA 3NF3A 2ETFA 3BONA 2G7PA 1ZKXA 1ZN3A 3ZUQA 2ISEA 3QW7A 3V0AB 3V0BA 3BTAA 4ELCA 3K3QB 3QIXA 2NZ9A 4ZKTB 4HEVA 1EPWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FFZ A;  4J1L A;  5BQM A;  2ILP A;  3VUO A;  3D3X A;  1XTF A;  3DDA A;  2G7K A;  5BQN A;  3V0A A;  1F82 A;  1F31 A;  3QIZ A;  2W2D A;  1G9B A;  1S0E A;  1I1E A;  2ISH A;  1YVG A;  3C88 A;  3DSE A;  3ZUR A;  3QW8 A;  4ZJX A;  3DEB A;  1S0F A;  1G9A A;  1ZB7 A;  1ZKW A;  3BOO A;  3FIE A;  1S0G A;  1E1H A;  4KS6 A;  1ZL6 A;  3QW6 A;  2FPQ A;  2NP0 A;  3QJ0 A;  3ZUS A;  2NYY A;  1G9D A;  3FII A;  1G9C A;  2G7Q A;  1ZL5 A;  1S0B A;  1T3A A;  3C8B A;  3QIY A;  1Z7H A;  2IMB A;  4EJ5 A;  1XTG A;  2A97 A;  3BOK A;  3C89 A;  2QN0 A;  3C8A A;  3DDB A;  1S0C A;  3DS9 A;  4EL4 A;  2ISG A;  2XHL A;  3V0B B;  3BWI A;  1T3C A;  2G7N A;  3QW5 A;  4KUF A;  4KTX A;  2IMC A;  1S0D A;  2A8A A;  2IMA A;  3NF3 A;  2ETF A;  3BON A;  2G7P A;  1ZKX A;  1ZN3 A;  3ZUQ A;  2ISE A;  3QW7 A;  3V0A B;  3V0B A;  3BTA A;  4ELC A;  3K3Q B;  3QIX A;  2NZ9 A;  4ZKT B;  4HEV A;  1EPW A; 
#chains in the Genus database with same CATH topology
 3FFZ A;  4J1L A;  5BQM A;  2ILP A;  3VUO A;  3D3X A;  1XTF A;  4QHF A;  3DDA A;  2G7K A;  5BQN A;  3V0A A;  1F82 A;  1F31 A;  3QIZ A;  2W2D A;  1G9B A;  1S0E A;  1I1E A;  2ISH A;  1YVG A;  3C88 A;  3DSE A;  4IL3 A;  3ZUR A;  3QW8 A;  3DEB A;  1S0F A;  4ZJX A;  1G9A A;  1ZB7 A;  4JIU A;  1ZKW A;  3BOO A;  2EJQ A;  3FIE A;  4JIX A;  1S0G A;  1E1H A;  4KS6 A;  1ZL6 A;  3QW6 A;  2FPQ A;  2NP0 A;  3QJ0 A;  3ZUS A;  2NYY A;  1G9D A;  3FII A;  1G9C A;  4AW6 A;  2G7Q A;  1ZL5 A;  1S0B A;  1T3A A;  3C8B A;  3QIY A;  1Z7H A;  2IMB A;  4EJ5 A;  1XTG A;  2A97 A;  3BOK A;  3C89 A;  2QN0 A;  3C8A A;  3DDB A;  1S0C A;  3DS9 A;  3E11 A;  4EL4 A;  2ISG A;  2XHL A;  3V0B B;  3BWI A;  1T3C A;  2G7N A;  3QW5 A;  4KUF A;  4KTX A;  2IMC A;  1S0D A;  2A8A A;  2IMA A;  3NF3 A;  2ETF A;  3BON A;  2G7P A;  1ZKX A;  1ZN3 A;  3ZUQ A;  2ISE A;  3QW7 A;  3V0A B;  3V0B A;  3BTA A;  4ELC A;  3K3Q B;  3CQB A;  2YPT A;  3QIX A;  2NZ9 A;  4ZKT B;  4HEV A;  1EPW A; 
#chains in the Genus database with same CATH homology
 3FFZ A;  4J1L A;  5BQM A;  2ILP A;  3VUO A;  3D3X A;  1XTF A;  3DDA A;  2G7K A;  5BQN A;  3V0A A;  1F82 A;  1F31 A;  3QIZ A;  2W2D A;  1G9B A;  1S0E A;  1I1E A;  2ISH A;  1YVG A;  3C88 A;  3DSE A;  3ZUR A;  3QW8 A;  4ZJX A;  3DEB A;  1S0F A;  1G9A A;  1ZB7 A;  1ZKW A;  3BOO A;  3FIE A;  1S0G A;  1E1H A;  4KS6 A;  1ZL6 A;  3QW6 A;  2FPQ A;  2NP0 A;  3QJ0 A;  3ZUS A;  2NYY A;  1G9D A;  3FII A;  1G9C A;  2G7Q A;  1ZL5 A;  1S0B A;  1T3A A;  3C8B A;  3QIY A;  1Z7H A;  2IMB A;  4EJ5 A;  1XTG A;  2A97 A;  3BOK A;  3C89 A;  2QN0 A;  3C8A A;  3DDB A;  1S0C A;  3DS9 A;  4EL4 A;  2ISG A;  2XHL A;  3V0B B;  3BWI A;  1T3C A;  2G7N A;  3QW5 A;  4KUF A;  4KTX A;  2IMC A;  1S0D A;  2A8A A;  2IMA A;  3NF3 A;  2ETF A;  3BON A;  2G7P A;  1ZKX A;  1ZN3 A;  3ZUQ A;  2ISE A;  3QW7 A;  3V0A B;  3V0B A;  3BTA A;  4ELC A;  3K3Q B;  3QIX A;  2NZ9 A;  4ZKT B;  4HEV A;  1EPW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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