3R38A

2.23 angstrom resolution crystal structure of udp-n-acetylglucosamine 1-carboxyvinyltransferase (mura) from listeria monocytogenes egd-e
Total Genus 141
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
141
sequence length
440
structure length
438
Chain Sequence
TENLYFQSNAMEKIIVRGGKQLNGSVKMEGAKNAVLPVIAATLLASKGTSVLKNVPNLSDVFTINEVLKYLNADVSFVNDEVTVDATGEITSDAPFEYVRKMRASIVVMGPLLARTGSARVALPGGCAIGSRPVDLHLKGFEAMGAVVKIENGYIEATAEKLVGAKVYLDFPSVGATQNIMMAATLAEGTTVIENVAREPEIVDLANFLNQMGARVIGAGTEVIRIEGVKELTATEHSIIPDRIEAGTFMIAAAITGGNVLIEDAVPEHISSLIAKLEEMGVQIIEEGIRVIGPDKLKAVDVKTMPHPGFPTDMQSQMMVIQMLSEGTSIMTETVFENRFMHVEEMRRMNADMKIEGHSVIISGPAKLQGAEVAATDLRAAAALILAGLVADGYTQVTELKYLDRGYNNFHGKLQALGADVERVDDSKVDVTNLASLF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
publication title 2.23 Angstrom resolution crystal structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase (murA) from Listeria monocytogenes EGD-e
rcsb
source organism Listeria monocytogenes
total genus 141
structure length 438
sequence length 440
ec nomenclature ec 2.5.1.7: UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
pdb deposition date 2011-03-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3r38A02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3r38A01
2GGAA 1RF5A 3KQJA 2AAYA 3V4TA 2O0ZA 3SWAA 4E7FA 1A2NA 3V5VA 3FJZA 2O15A 1UAEA 3SU9A 3SG1A 2PQ9A 4E7CA 5BS5A 4R7UA 1Q36A 3SWDA 2O0DA 1G6SA 2Z2CA 1RYWA 3ISSA 2RL2A 4E7EA 3ZH4A 1G6TA 3ZH3A 3ROIA 1Q3GA 5U4HA 1YBGA 1NAWA 1X8TA 3UPKA 2PQCA 3FK0A 1X8RA 4E7GA 2AA9A 5BQ2A 3LTHA 3SPBA 2QFTA 2O0EA 2QFQA 5BUFA 3SWIA 4GFPA 3TR1A 3KR6A 2GG6A 2QFUA 4EGRA 3SLHA 1RF6A 3VCYA 3SWEA 4EIIA 4ZNDA 4FQDA 2BJBA 3NVSA 2GGDA 1EJDA 1EYNA 3FJXA 1RF4A 2PQBA 4N3PA 4E7DA 2RL1A 3KQAA 2GG4A 2PQDA 3RMTA 3TI2A 2QFSA 1DLGA 1P88A 1P89A 3SWGA 3FK1A 3R38A 2O0BA 2YVWA 2O0XA 1EJCA 4E7BA 3SWQA 1MI4A
chains in the Genus database with same CATH superfamily
2GGAA 1RF5A 3KQJA 1QMHA 2AAYA 3V4TA 2O0ZA 3SWAA 3TUTA 4E7FA 1A2NA 3V5VA 3FJZA 2O15A 3KGDA 4CLQA 1UAEA 3TUXA 3SU9A 3SG1A 2PQ9A 4E7CA 5BS5A 4R7UA 1Q36A 3SWDA 2O0DA 1G6SA 2Z2CA 4O8JA 1RYWA 3ISSA 2RL2A 4E7EA 3ZH4A 1G6TA 4O89A 3ZH3A 3TV1A 3ROIA 1Q3GA 5U4HA 1YBGA 1NAWA 1X8TA 3UPKA 2PQCA 3FK0A 1X8RA 4E7GA 2AA9A 5BQ2A 3LTHA 3SPBA 2QFTA 2O0EA 2QFQA 3PQVA 5BUFA 3SWIA 1QMIA 4GFPA 3TR1A 3KR6A 2GG6A 2QFUA 4EGRA 3SLHA 1RF6A 3VCYA 3TW3A 3SWEA 4EIIA 4ZNDA 4FQDA 2BJBA 3NVSA 2GGDA 1EJDA 1EYNA 3FJXA 1RF4A 2PQBA 4N3PA 4E7DA 2RL1A 3KQAA 2GG4A 2PQDA 3RMTA 3TI2A 2QFSA 1DLGA 1P88A 1P89A 3SWGA 3FK1A 3R38A 2O0BA 2YVWA 2O0XA 1EJCA 4E7BA 3SWQA 1MI4A
chains in the Genus database with same CATH topology
2GGAA 1RF5A 3KQJA 2AAYA 3V4TA 2O0ZA 3SWAA 4E7FA 1A2NA 3V5VA 3FJZA 2O15A 1UAEA 3SU9A 3SG1A 2PQ9A 4E7CA 5BS5A 4R7UA 1Q36A 3SWDA 2O0DA 1G6SA 2Z2CA 1RYWA 3ISSA 2RL2A 4E7EA 3ZH4A 1G6TA 3ZH3A 3ROIA 1Q3GA 5U4HA 1YBGA 1NAWA 1X8TA 3UPKA 2PQCA 3FK0A 1X8RA 4E7GA 2AA9A 5BQ2A 3LTHA 3SPBA 2QFTA 2O0EA 2QFQA 5BUFA 3SWIA 4GFPA 3TR1A 3KR6A 2GG6A 2QFUA 4EGRA 3SLHA 1RF6A 3VCYA 3SWEA 4EIIA 4ZNDA 4FQDA 2BJBA 3NVSA 2GGDA 1EJDA 1EYNA 3FJXA 1RF4A 2PQBA 4N3PA 4E7DA 2RL1A 3KQAA 2GG4A 2PQDA 3RMTA 3TI2A 2QFSA 1DLGA 1P88A 1P89A 3SWGA 3FK1A 3R38A 2O0BA 2YVWA 2O0XA 1EJCA 4E7BA 3SWQA 1MI4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GGA A;  1RF5 A;  3KQJ A;  2AAY A;  3V4T A;  2O0Z A;  3SWA A;  4E7F A;  1A2N A;  3V5V A;  3FJZ A;  2O15 A;  1UAE A;  3SU9 A;  3SG1 A;  2PQ9 A;  4E7C A;  5BS5 A;  4R7U A;  1Q36 A;  3SWD A;  2O0D A;  1G6S A;  2Z2C A;  1RYW A;  3ISS A;  2RL2 A;  4E7E A;  3ZH4 A;  1G6T A;  3ZH3 A;  3ROI A;  1Q3G A;  5U4H A;  1YBG A;  1NAW A;  1X8T A;  3UPK A;  2PQC A;  3FK0 A;  1X8R A;  4E7G A;  2AA9 A;  5BQ2 A;  3LTH A;  3SPB A;  2QFT A;  2O0E A;  2QFQ A;  5BUF A;  3SWI A;  4GFP A;  3TR1 A;  3KR6 A;  2GG6 A;  2QFU A;  4EGR A;  3SLH A;  1RF6 A;  3VCY A;  3SWE A;  4EII A;  4ZND A;  4FQD A;  2BJB A;  3NVS A;  2GGD A;  1EJD A;  1EYN A;  3FJX A;  1RF4 A;  2PQB A;  4N3P A;  4E7D A;  2RL1 A;  3KQA A;  2GG4 A;  2PQD A;  3RMT A;  3TI2 A;  2QFS A;  1DLG A;  1P88 A;  1P89 A;  3SWG A;  3FK1 A;  3R38 A;  2O0B A;  2YVW A;  2O0X A;  1EJC A;  4E7B A;  3SWQ A;  1MI4 A; 
#chains in the Genus database with same CATH topology
 2GGA A;  1RF5 A;  3KQJ A;  1QMH A;  2AAY A;  3V4T A;  2O0Z A;  3SWA A;  3TUT A;  4E7F A;  1A2N A;  3V5V A;  3FJZ A;  2O15 A;  3KGD A;  4CLQ A;  1UAE A;  3TUX A;  3SU9 A;  3SG1 A;  2PQ9 A;  4E7C A;  5BS5 A;  4R7U A;  1Q36 A;  3SWD A;  2O0D A;  1G6S A;  2Z2C A;  4O8J A;  1RYW A;  3ISS A;  2RL2 A;  4E7E A;  3ZH4 A;  1G6T A;  4O89 A;  3ZH3 A;  3TV1 A;  3ROI A;  1Q3G A;  5U4H A;  1YBG A;  1NAW A;  1X8T A;  3UPK A;  2PQC A;  3FK0 A;  1X8R A;  4E7G A;  2AA9 A;  5BQ2 A;  3LTH A;  3SPB A;  2QFT A;  2O0E A;  2QFQ A;  3PQV A;  5BUF A;  3SWI A;  1QMI A;  4GFP A;  3TR1 A;  3KR6 A;  2GG6 A;  2QFU A;  4EGR A;  3SLH A;  1RF6 A;  3VCY A;  3TW3 A;  3SWE A;  4EII A;  4ZND A;  4FQD A;  2BJB A;  3NVS A;  2GGD A;  1EJD A;  1EYN A;  3FJX A;  1RF4 A;  2PQB A;  4N3P A;  4E7D A;  2RL1 A;  3KQA A;  2GG4 A;  2PQD A;  3RMT A;  3TI2 A;  2QFS A;  1DLG A;  1P88 A;  1P89 A;  3SWG A;  3FK1 A;  3R38 A;  2O0B A;  2YVW A;  2O0X A;  1EJC A;  4E7B A;  3SWQ A;  1MI4 A; 
#chains in the Genus database with same CATH homology
 2GGA A;  1RF5 A;  3KQJ A;  2AAY A;  3V4T A;  2O0Z A;  3SWA A;  4E7F A;  1A2N A;  3V5V A;  3FJZ A;  2O15 A;  1UAE A;  3SU9 A;  3SG1 A;  2PQ9 A;  4E7C A;  5BS5 A;  4R7U A;  1Q36 A;  3SWD A;  2O0D A;  1G6S A;  2Z2C A;  1RYW A;  3ISS A;  2RL2 A;  4E7E A;  3ZH4 A;  1G6T A;  3ZH3 A;  3ROI A;  1Q3G A;  5U4H A;  1YBG A;  1NAW A;  1X8T A;  3UPK A;  2PQC A;  3FK0 A;  1X8R A;  4E7G A;  2AA9 A;  5BQ2 A;  3LTH A;  3SPB A;  2QFT A;  2O0E A;  2QFQ A;  5BUF A;  3SWI A;  4GFP A;  3TR1 A;  3KR6 A;  2GG6 A;  2QFU A;  4EGR A;  3SLH A;  1RF6 A;  3VCY A;  3SWE A;  4EII A;  4ZND A;  4FQD A;  2BJB A;  3NVS A;  2GGD A;  1EJD A;  1EYN A;  3FJX A;  1RF4 A;  2PQB A;  4N3P A;  4E7D A;  2RL1 A;  3KQA A;  2GG4 A;  2PQD A;  3RMT A;  3TI2 A;  2QFS A;  1DLG A;  1P88 A;  1P89 A;  3SWG A;  3FK1 A;  3R38 A;  2O0B A;  2YVW A;  2O0X A;  1EJC A;  4E7B A;  3SWQ A;  1MI4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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