3R5QA

Crystal structure of sheep lactoperoxidase in complex with tetrahydrofuran at 2.7 a resolution
Total Genus 171
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
171
sequence length
595
structure length
594
Chain Sequence
SWEVGCGAPVPLVKCDENSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLAVPFGWTQRKTRNGFRVPLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPETELGSSEHSKVQCEEYCIQGDNCFPIMFPKNDPKLKTQGKCMPFFRAGFVCPTPPYQSLARDQINSVTSFLDASLVYGSEPLASRLRNLSSPLGLMAVNQEAWDHGLAYPPFNNMKPSPCEFINTTARVPCFQAGDSRASEQILLATVHTLLLREHNRLARELKRLNPHWDGEKLYQEARKILGAFIQIITFRDYLPIVLGSEMQKWIPRYQGYNNSVDPRISNVFTFAFRFGHMEVPSTVSRLDENYQPRGPEAELPLHTLFFNTWRIIKDGGIDPLVRGLLAKKSKLMNQNKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKILAKKLLDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENPGVFTEKQRDSLQKVSFSRLICDNTHITKVPLHAFQANNYPHDFVDCSAIDKLDLSPWASREN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords Airway lactoperoxidase
publication title Crystal structure of sheep lactoperoxidase in complex with tetrahydrofuran at 2.7 A resolution
rcsb
total genus 171
structure length 594
sequence length 595
ec nomenclature ec 1.11.1.7: Peroxidase.
pdb deposition date 2011-03-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03098 An_peroxidase Animal haem peroxidase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.640.10 Mainly Alpha Orthogonal Bundle Myeloperoxidase, subunit C Haem peroxidase domain superfamily, animal type 3r5qA00
2PUMA 5COXA 4RRXA 3KK6A 1MHLC 3R5OA 1D7WC 3RKEA 3I6NA 4KVJA 3NTBA 3N8WB 5JVYA 1HT5A 3GCKA 1EQHA 2NQXA 3R5QA 2OJVA 3SXVA 4M11A 3F9PC 3NAKA 5B72A 3TZIA 3LN1A 4GN6A 3NYHA 2IPSA 3QH0A 1PXXA 3R55A 5FIWC 4RUTA 3FAQA 3TGYA 3ZS1C 4HHSA 2O86A 4NJBA 4COXA 3GCJA 2EFBA 1CX2A 4NT3A 4KVKA 2IKCA 2EHAA 4C1MC 1FE2A 5IKRA 3HS5A 1CVUA 1DNWC 1U67A 3NIUA 2AYLA 3QF1A 1HT8A 3OLUA 3R4XA 4Z0LA 3S4FA 3Q7DA 5GH0A 3N8YB 4N7AA 4IG5A 4KVLA 3QL6A 4QYQA 5FF1A 3HS6A 4E1GA 4RRYA 3GCLA 6COXA 2GJMA 2OYEP 2QPKA 1DDXA 3FNLA 5F19A 3QMOA 1PGEA 3RR3A 4MSFA 1Q4GA 3N8ZA 1DIYA 4GM7A 4OEKA 3HS7A 5IKTA 3KRQA 2R5LA 4OTYA 3N8WA 4PNXA 4OTJA 4LJJA 4KSZA 5KIRA 1MYPC 2QRBA 3ZS0C 3PY4A 5GLSA 2QQTA 1CXPC 4FM5A 4DL1C 1EQGA 4HHRA 3GC1A 3KRKA 3MQEA 5F1AA 4M10A 5JVZA 3NTGA 3UBAA 3PGHA 1PTHA 1EBVA 3OGWA 2E9EA 3BXIA 3ERIA 1CQEA 1D2VC 3N8XA 1PRHA 3NT1A 3V6QA 5HPWA 1IGZA 4QJQA 1DNUC 3N8FA 3LN0A 5FDQA 5IKQA 3MDLA 3N8YA 5JW1A 5IKVA 4RRWA 4Y55A 3N8VA 1IGXA 2PT3A 3ERHA 2Z5ZA 4PH9A 4RS0A 4O1ZA 4RRZA 2OYUP 1D5LC 3Q9KA 3OLTA
chains in the Genus database with same CATH superfamily
2PUMA 5COXA 4RRXA 3KK6A 1MHLC 3R5OA 1D7WC 3RKEA 3I6NA 4KVJA 3NTBA 3N8WB 5JVYA 1HT5A 3GCKA 1EQHA 2NQXA 3R5QA 2OJVA 3SXVA 4M11A 3F9PC 3NAKA 5B72A 3TZIA 3LN1A 4GN6A 3NYHA 2IPSA 3QH0A 1PXXA 3R55A 5FIWC 4RUTA 3FAQA 3TGYA 3ZS1C 4HHSA 2O86A 4NJBA 4COXA 3GCJA 2EFBA 1CX2A 4NT3A 4KVKA 2IKCA 2EHAA 4C1MC 1FE2A 5IKRA 3HS5A 1CVUA 1DNWC 1U67A 3NIUA 2AYLA 3QF1A 1HT8A 3OLUA 3R4XA 4Z0LA 3S4FA 3Q7DA 5GH0A 3N8YB 4N7AA 4IG5A 4KVLA 3QL6A 4QYQA 5FF1A 3HS6A 4E1GA 4RRYA 3GCLA 6COXA 2GJMA 2OYEP 2QPKA 1DDXA 3FNLA 5F19A 3QMOA 1PGEA 3RR3A 4MSFA 1Q4GA 3N8ZA 1DIYA 4GM7A 4OEKA 3HS7A 5IKTA 3KRQA 2R5LA 4OTYA 3N8WA 4PNXA 4OTJA 4LJJA 4KSZA 5KIRA 1MYPC 2QRBA 3ZS0C 3PY4A 5GLSA 2QQTA 1CXPC 4FM5A 4DL1C 1EQGA 4HHRA 3GC1A 3KRKA 3MQEA 5F1AA 4M10A 5JVZA 3NTGA 3UBAA 3PGHA 1PTHA 1EBVA 3OGWA 2E9EA 3BXIA 3ERIA 1CQEA 1D2VC 3N8XA 1PRHA 3NT1A 3V6QA 5HPWA 1IGZA 4QJQA 1DNUC 3N8FA 3LN0A 5FDQA 5IKQA 3MDLA 3N8YA 5JW1A 5IKVA 4RRWA 4Y55A 3N8VA 1IGXA 2PT3A 3ERHA 2Z5ZA 4PH9A 4RS0A 4O1ZA 4RRZA 2OYUP 1D5LC 3Q9KA 3OLTA
chains in the Genus database with same CATH topology
2PUMA 5COXA 4RRXA 3KK6A 1MHLC 3R5OA 1D7WC 3RKEA 3I6NA 4KVJA 3NTBA 3N8WB 5JVYA 1HT5A 3GCKA 1EQHA 2NQXA 3R5QA 2OJVA 3SXVA 4M11A 3F9PC 3NAKA 5B72A 3TZIA 3LN1A 4GN6A 3NYHA 2IPSA 3QH0A 1PXXA 3R55A 5FIWC 4RUTA 3FAQA 3TGYA 3ZS1C 4HHSA 2O86A 4NJBA 4COXA 3GCJA 2EFBA 1CX2A 4NT3A 4KVKA 2IKCA 2EHAA 4C1MC 1FE2A 5IKRA 3HS5A 1CVUA 1DNWC 1U67A 3NIUA 2AYLA 3QF1A 1HT8A 3OLUA 3R4XA 4Z0LA 3S4FA 3Q7DA 5GH0A 3N8YB 4N7AA 4IG5A 4KVLA 3QL6A 4QYQA 5FF1A 3HS6A 4E1GA 4RRYA 3GCLA 6COXA 2GJMA 2OYEP 2QPKA 1DDXA 3FNLA 5F19A 3QMOA 1PGEA 3RR3A 4MSFA 1Q4GA 3N8ZA 1DIYA 4GM7A 4OEKA 3HS7A 5IKTA 3KRQA 2R5LA 4OTYA 3N8WA 4PNXA 4OTJA 4LJJA 4KSZA 5KIRA 1MYPC 2QRBA 3ZS0C 3PY4A 5GLSA 2QQTA 1CXPC 4FM5A 4DL1C 1EQGA 4HHRA 3GC1A 3KRKA 3MQEA 5F1AA 4M10A 5JVZA 3NTGA 3UBAA 3PGHA 1PTHA 1EBVA 3OGWA 2E9EA 3BXIA 3ERIA 1CQEA 1D2VC 3N8XA 1PRHA 3NT1A 3V6QA 5HPWA 1IGZA 4QJQA 1DNUC 3N8FA 3LN0A 5FDQA 5IKQA 3MDLA 3N8YA 5JW1A 5IKVA 4RRWA 4Y55A 3N8VA 1IGXA 2PT3A 3ERHA 2Z5ZA 4PH9A 4RS0A 4O1ZA 4RRZA 2OYUP 1D5LC 3Q9KA 3OLTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PUM A;  5COX A;  4RRX A;  3KK6 A;  1MHL C;  3R5O A;  1D7W C;  3RKE A;  3I6N A;  4KVJ A;  3NTB A;  3N8W B;  5JVY A;  1HT5 A;  3GCK A;  1EQH A;  2NQX A;  3R5Q A;  2OJV A;  3SXV A;  4M11 A;  3F9P C;  3NAK A;  5B72 A;  3TZI A;  3LN1 A;  4GN6 A;  3NYH A;  2IPS A;  3QH0 A;  1PXX A;  3R55 A;  5FIW C;  4RUT A;  3FAQ A;  3TGY A;  3ZS1 C;  4HHS A;  2O86 A;  4NJB A;  4COX A;  3GCJ A;  2EFB A;  1CX2 A;  4NT3 A;  4KVK A;  2IKC A;  2EHA A;  4C1M C;  1FE2 A;  5IKR A;  3HS5 A;  1CVU A;  1DNW C;  1U67 A;  3NIU A;  2AYL A;  3QF1 A;  1HT8 A;  3OLU A;  3R4X A;  4Z0L A;  3S4F A;  3Q7D A;  5GH0 A;  3N8Y B;  4N7A A;  4IG5 A;  4KVL A;  3QL6 A;  4QYQ A;  5FF1 A;  3HS6 A;  4E1G A;  4RRY A;  3GCL A;  6COX A;  2GJM A;  2OYE P;  2QPK A;  1DDX A;  3FNL A;  5F19 A;  3QMO A;  1PGE A;  3RR3 A;  4MSF A;  1Q4G A;  3N8Z A;  1DIY A;  4GM7 A;  4OEK A;  3HS7 A;  5IKT A;  3KRQ A;  2R5L A;  4OTY A;  3N8W A;  4PNX A;  4OTJ A;  4LJJ A;  4KSZ A;  5KIR A;  1MYP C;  2QRB A;  3ZS0 C;  3PY4 A;  5GLS A;  2QQT A;  1CXP C;  4FM5 A;  4DL1 C;  1EQG A;  4HHR A;  3GC1 A;  3KRK A;  3MQE A;  5F1A A;  4M10 A;  5JVZ A;  3NTG A;  3UBA A;  3PGH A;  1PTH A;  1EBV A;  3OGW A;  2E9E A;  3BXI A;  3ERI A;  1CQE A;  1D2V C;  3N8X A;  1PRH A;  3NT1 A;  3V6Q A;  5HPW A;  1IGZ A;  4QJQ A;  1DNU C;  3N8F A;  3LN0 A;  5FDQ A;  5IKQ A;  3MDL A;  3N8Y A;  5JW1 A;  5IKV A;  4RRW A;  4Y55 A;  3N8V A;  1IGX A;  2PT3 A;  3ERH A;  2Z5Z A;  4PH9 A;  4RS0 A;  4O1Z A;  4RRZ A;  2OYU P;  1D5L C;  3Q9K A;  3OLT A; 
#chains in the Genus database with same CATH topology
 2PUM A;  5COX A;  4RRX A;  3KK6 A;  1MHL C;  3R5O A;  1D7W C;  3RKE A;  3I6N A;  4KVJ A;  3NTB A;  3N8W B;  5JVY A;  1HT5 A;  3GCK A;  1EQH A;  2NQX A;  3R5Q A;  2OJV A;  3SXV A;  4M11 A;  3F9P C;  3NAK A;  5B72 A;  3TZI A;  3LN1 A;  4GN6 A;  3NYH A;  2IPS A;  3QH0 A;  1PXX A;  3R55 A;  5FIW C;  4RUT A;  3FAQ A;  3TGY A;  3ZS1 C;  4HHS A;  2O86 A;  4NJB A;  4COX A;  3GCJ A;  2EFB A;  1CX2 A;  4NT3 A;  4KVK A;  2IKC A;  2EHA A;  4C1M C;  1FE2 A;  5IKR A;  3HS5 A;  1CVU A;  1DNW C;  1U67 A;  3NIU A;  2AYL A;  3QF1 A;  1HT8 A;  3OLU A;  3R4X A;  4Z0L A;  3S4F A;  3Q7D A;  5GH0 A;  3N8Y B;  4N7A A;  4IG5 A;  4KVL A;  3QL6 A;  4QYQ A;  5FF1 A;  3HS6 A;  4E1G A;  4RRY A;  3GCL A;  6COX A;  2GJM A;  2OYE P;  2QPK A;  1DDX A;  3FNL A;  5F19 A;  3QMO A;  1PGE A;  3RR3 A;  4MSF A;  1Q4G A;  3N8Z A;  1DIY A;  4GM7 A;  4OEK A;  3HS7 A;  5IKT A;  3KRQ A;  2R5L A;  4OTY A;  3N8W A;  4PNX A;  4OTJ A;  4LJJ A;  4KSZ A;  5KIR A;  1MYP C;  2QRB A;  3ZS0 C;  3PY4 A;  5GLS A;  2QQT A;  1CXP C;  4FM5 A;  4DL1 C;  1EQG A;  4HHR A;  3GC1 A;  3KRK A;  3MQE A;  5F1A A;  4M10 A;  5JVZ A;  3NTG A;  3UBA A;  3PGH A;  1PTH A;  1EBV A;  3OGW A;  2E9E A;  3BXI A;  3ERI A;  1CQE A;  1D2V C;  3N8X A;  1PRH A;  3NT1 A;  3V6Q A;  5HPW A;  1IGZ A;  4QJQ A;  1DNU C;  3N8F A;  3LN0 A;  5FDQ A;  5IKQ A;  3MDL A;  3N8Y A;  5JW1 A;  5IKV A;  4RRW A;  4Y55 A;  3N8V A;  1IGX A;  2PT3 A;  3ERH A;  2Z5Z A;  4PH9 A;  4RS0 A;  4O1Z A;  4RRZ A;  2OYU P;  1D5L C;  3Q9K A;  3OLT A; 
#chains in the Genus database with same CATH homology
 2PUM A;  5COX A;  4RRX A;  3KK6 A;  1MHL C;  3R5O A;  1D7W C;  3RKE A;  3I6N A;  4KVJ A;  3NTB A;  3N8W B;  5JVY A;  1HT5 A;  3GCK A;  1EQH A;  2NQX A;  3R5Q A;  2OJV A;  3SXV A;  4M11 A;  3F9P C;  3NAK A;  5B72 A;  3TZI A;  3LN1 A;  4GN6 A;  3NYH A;  2IPS A;  3QH0 A;  1PXX A;  3R55 A;  5FIW C;  4RUT A;  3FAQ A;  3TGY A;  3ZS1 C;  4HHS A;  2O86 A;  4NJB A;  4COX A;  3GCJ A;  2EFB A;  1CX2 A;  4NT3 A;  4KVK A;  2IKC A;  2EHA A;  4C1M C;  1FE2 A;  5IKR A;  3HS5 A;  1CVU A;  1DNW C;  1U67 A;  3NIU A;  2AYL A;  3QF1 A;  1HT8 A;  3OLU A;  3R4X A;  4Z0L A;  3S4F A;  3Q7D A;  5GH0 A;  3N8Y B;  4N7A A;  4IG5 A;  4KVL A;  3QL6 A;  4QYQ A;  5FF1 A;  3HS6 A;  4E1G A;  4RRY A;  3GCL A;  6COX A;  2GJM A;  2OYE P;  2QPK A;  1DDX A;  3FNL A;  5F19 A;  3QMO A;  1PGE A;  3RR3 A;  4MSF A;  1Q4G A;  3N8Z A;  1DIY A;  4GM7 A;  4OEK A;  3HS7 A;  5IKT A;  3KRQ A;  2R5L A;  4OTY A;  3N8W A;  4PNX A;  4OTJ A;  4LJJ A;  4KSZ A;  5KIR A;  1MYP C;  2QRB A;  3ZS0 C;  3PY4 A;  5GLS A;  2QQT A;  1CXP C;  4FM5 A;  4DL1 C;  1EQG A;  4HHR A;  3GC1 A;  3KRK A;  3MQE A;  5F1A A;  4M10 A;  5JVZ A;  3NTG A;  3UBA A;  3PGH A;  1PTH A;  1EBV A;  3OGW A;  2E9E A;  3BXI A;  3ERI A;  1CQE A;  1D2V C;  3N8X A;  1PRH A;  3NT1 A;  3V6Q A;  5HPW A;  1IGZ A;  4QJQ A;  1DNU C;  3N8F A;  3LN0 A;  5FDQ A;  5IKQ A;  3MDL A;  3N8Y A;  5JW1 A;  5IKV A;  4RRW A;  4Y55 A;  3N8V A;  1IGX A;  2PT3 A;  3ERH A;  2Z5Z A;  4PH9 A;  4RS0 A;  4O1Z A;  4RRZ A;  2OYU P;  1D5L C;  3Q9K A;  3OLT A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...