3R6CA

Anthranilate phosphoribosyltransferase (trpd) from mycobacterium tuberculosis (complex with inhibitor acs179)
Total Genus 120
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
120
sequence length
346
structure length
346
Chain Sequence
PSWPQILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARRSSVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGAIVAHAGLSSRAEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase/transferase inhibitor
molecule keywords Anthranilate phosphoribosyltransferase
publication title The Substrate Capture Mechanism of Mycobacterium tuberculosis Anthranilate Phosphoribosyltransferase Provides a Mode for Inhibition.
pubmed doi rcsb
source organism Mycobacterium tuberculosis
total genus 120
structure length 346
sequence length 346
chains with identical sequence B
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2011-03-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 3r6cA01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 3r6cA02
1UOUA 3UU1A 4M0RA 4N5VA 1ZVWA 1ZYKA 5BNEA 4OWSA 1ZXYA 4ZOKA 3H5QA 4GIUA 4X5BA 4X5DA 5BYTA 4GKMA 4OWUA 4IJ1A 1AZYA 4X46A 2GVQA 4OWVA 4X58A 3QR9A 3R6CA 4OWQA 4X59A 4ZTVA 5EY3A 3QQSA 5EP8A 4XR5A 4ZOJA 4GA4A 4EADA 4N8QA 4X5CA 4YI7A 4ZOFA 4EAFA 3QS8A 1GXBA 5C1RA 1KHDA 4OWNA 5C7SA 1KGZA 2BPQA 1O17A 2WK6A 4GTNA 4N93A 4GA5A 4LHMA 2TPTA 2WK5A 2J0FA 1V8GA 4GA6A 4HKMA 4YYYA 5C2LA 2ELCA 4OWOA 4MUOA 4X5EA 4X5AA 3TWPA 4YEKA 3R88A 3QSAA 2DSJA 5BO3A 1BRWA 4OWMA 1VQUA 3GBRA 5BO2A 1OTPA
chains in the Genus database with same CATH superfamily
1UOUA 3UU1A 4M0RA 4N5VA 1ZVWA 1ZYKA 5BNEA 4OWSA 1ZXYA 4ZOKA 3H5QA 4GIUA 4X5BA 4X5DA 5BYTA 1RRZA 4GKMA 4OWUA 4IJ1A 1AZYA 4X46A 2GVQA 4OWVA 4X58A 3QR9A 3R6CA 4OWQA 4X59A 4ZTVA 5EY3A 3QQSA 5EP8A 4XR5A 4ZOJA 4GA4A 4EADA 4N8QA 4X5CA 4YI7A 4ZOFA 4EAFA 3QS8A 1GXBA 5C1RA 1KHDA 4OWNA 5C7SA 1KGZA 2BPQA 1O17A 2WK6A 4GTNA 4GA5A 4N93A 4LHMA 2TPTA 2WK5A 2J0FA 1V8GA 4GA6A 1RF8B 4HKMA 4YYYA 5C2LA 2ELCA 4OWOA 4MUOA 4X5EA 4F3FC 4X5AA 3TWPA 4YEKA 3R88A 3QSAA 2DSJA 5BO3A 1BRWA 4OWMA 1VQUA 3GBRA 5BO2A 1OTPA
chains in the Genus database with same CATH topology
1UOUA 3UU1A 4M0RA 4N5VA 1ZVWA 1ZYKA 5BNEA 4OWSA 1ZXYA 4ZOKA 3H5QA 4GIUA 4X5BA 4X5DA 5BYTA 4GKMA 4OWUA 4IJ1A 1AZYA 4X46A 2GVQA 4OWVA 4X58A 3QR9A 3R6CA 4OWQA 4X59A 4ZTVA 5EY3A 3QQSA 5EP8A 4XR5A 4ZOJA 4GA4A 4EADA 4N8QA 4X5CA 4YI7A 4ZOFA 4EAFA 3QS8A 1GXBA 5C1RA 1KHDA 4OWNA 5C7SA 1KGZA 2BPQA 1O17A 2WK6A 4GTNA 4N93A 4GA5A 4LHMA 2TPTA 2WK5A 2J0FA 1V8GA 4GA6A 4HKMA 4YYYA 5C2LA 2ELCA 4OWOA 4MUOA 4X5EA 4X5AA 3TWPA 4YEKA 3R88A 3QSAA 2DSJA 5BO3A 1BRWA 4OWMA 1VQUA 3GBRA 5BO2A 1OTPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1UOU A;  3UU1 A;  4M0R A;  4N5V A;  1ZVW A;  1ZYK A;  5BNE A;  4OWS A;  1ZXY A;  4ZOK A;  3H5Q A;  4GIU A;  4X5B A;  4X5D A;  5BYT A;  4GKM A;  4OWU A;  4IJ1 A;  1AZY A;  4X46 A;  2GVQ A;  4OWV A;  4X58 A;  3QR9 A;  3R6C A;  4OWQ A;  4X59 A;  4ZTV A;  5EY3 A;  3QQS A;  5EP8 A;  4XR5 A;  4ZOJ A;  4GA4 A;  4EAD A;  4N8Q A;  4X5C A;  4YI7 A;  4ZOF A;  4EAF A;  3QS8 A;  1GXB A;  5C1R A;  1KHD A;  4OWN A;  5C7S A;  1KGZ A;  2BPQ A;  1O17 A;  2WK6 A;  4GTN A;  4N93 A;  4GA5 A;  4LHM A;  2TPT A;  2WK5 A;  2J0F A;  1V8G A;  4GA6 A;  4HKM A;  4YYY A;  5C2L A;  2ELC A;  4OWO A;  4MUO A;  4X5E A;  4X5A A;  3TWP A;  4YEK A;  3R88 A;  3QSA A;  2DSJ A;  5BO3 A;  1BRW A;  4OWM A;  1VQU A;  3GBR A;  5BO2 A;  1OTP A; 
#chains in the Genus database with same CATH topology
 1UOU A;  3UU1 A;  4M0R A;  4N5V A;  1ZVW A;  1ZYK A;  5BNE A;  4OWS A;  1ZXY A;  4ZOK A;  3H5Q A;  4GIU A;  4X5B A;  4X5D A;  5BYT A;  1RRZ A;  4GKM A;  4OWU A;  4IJ1 A;  1AZY A;  4X46 A;  2GVQ A;  4OWV A;  4X58 A;  3QR9 A;  3R6C A;  4OWQ A;  4X59 A;  4ZTV A;  5EY3 A;  3QQS A;  5EP8 A;  4XR5 A;  4ZOJ A;  4GA4 A;  4EAD A;  4N8Q A;  4X5C A;  4YI7 A;  4ZOF A;  4EAF A;  3QS8 A;  1GXB A;  5C1R A;  1KHD A;  4OWN A;  5C7S A;  1KGZ A;  2BPQ A;  1O17 A;  2WK6 A;  4GTN A;  4GA5 A;  4N93 A;  4LHM A;  2TPT A;  2WK5 A;  2J0F A;  1V8G A;  4GA6 A;  1RF8 B;  4HKM A;  4YYY A;  5C2L A;  2ELC A;  4OWO A;  4MUO A;  4X5E A;  4F3F C;  4X5A A;  3TWP A;  4YEK A;  3R88 A;  3QSA A;  2DSJ A;  5BO3 A;  1BRW A;  4OWM A;  1VQU A;  3GBR A;  5BO2 A;  1OTP A; 
#chains in the Genus database with same CATH homology
 1UOU A;  3UU1 A;  4M0R A;  4N5V A;  1ZVW A;  1ZYK A;  5BNE A;  4OWS A;  1ZXY A;  4ZOK A;  3H5Q A;  4GIU A;  4X5B A;  4X5D A;  5BYT A;  4GKM A;  4OWU A;  4IJ1 A;  1AZY A;  4X46 A;  2GVQ A;  4OWV A;  4X58 A;  3QR9 A;  3R6C A;  4OWQ A;  4X59 A;  4ZTV A;  5EY3 A;  3QQS A;  5EP8 A;  4XR5 A;  4ZOJ A;  4GA4 A;  4EAD A;  4N8Q A;  4X5C A;  4YI7 A;  4ZOF A;  4EAF A;  3QS8 A;  1GXB A;  5C1R A;  1KHD A;  4OWN A;  5C7S A;  1KGZ A;  2BPQ A;  1O17 A;  2WK6 A;  4GTN A;  4N93 A;  4GA5 A;  4LHM A;  2TPT A;  2WK5 A;  2J0F A;  1V8G A;  4GA6 A;  4HKM A;  4YYY A;  5C2L A;  2ELC A;  4OWO A;  4MUO A;  4X5E A;  4X5A A;  3TWP A;  4YEK A;  3R88 A;  3QSA A;  2DSJ A;  5BO3 A;  1BRW A;  4OWM A;  1VQU A;  3GBR A;  5BO2 A;  1OTP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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