3ROIA

2.20 angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (aroa) from coxiella burnetii
Total Genus 137
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
137
sequence length
436
structure length
431
Chain Sequence
AMDYQTIPSQGLSGEICVPGDKSISHRAVLLAAIAEGQTQVDGFLMGADNLAMVSALQQMGASIQVIEDENILVVEGVGMTGLQAPPEALDCGNSGTAIRLLSGLLAGQPFNTVLTGDSSLQRRPMKRIIDPLTLMGAKIDSTGNVPPLKIYGNPRLTGIHYQLPMASAQVKSCLLLAGLYARGKTCITEPAPSRDHTERLLKHFHYTLQSICVSGGGKLKANDISIPGDISSAAFFIVAATITPGSAIRLCRVGVNPTRLGVINLLKMMGADIEVTHYTEKNEPTADITVRHARLKGIDIPPDQVPLTIDEFPVLLIAAAVAQGKTVLRDAAELRVKETDRIAAMVDGLQKLGIAAESLPDGVIIQGGTLEGGEVNSYDDHRIAMAFAVAGTLAKGPVRIRNCDNVKTSFPNFVELANEVGMNVKGVRGR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords 3-phosphoshikimate 1-carboxyvinyltransferase
publication title 2.20 Angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (AroA) from Coxiella burnetii
rcsb
source organism Coxiella burnetii
total genus 137
structure length 431
sequence length 436
chains with identical sequence B
ec nomenclature ec 2.5.1.19: 3-phosphoshikimate 1-carboxyvinyltransferase.
pdb deposition date 2011-04-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3roiA02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3roiA01
1EJCA 2Z2CA 2YVWA 1P89A 2PQBA 3KQAA 5U4HA 3ZH3A 3SWEA 2GGDA 5BUFA 4R7UA 1G6TA 4E7GA 2O0EA 1A2NA 3ROIA 2O0DA 2GGAA 4E7DA 3SLHA 2QFQA 1EYNA 1X8TA 1P88A 3FK1A 3SWQA 2QFUA 1X8RA 3LTHA 2PQCA 2RL2A 1UAEA 2O15A 3SWAA 4EIIA 4GFPA 4E7FA 2GG4A 3V5VA 2AA9A 4E7BA 1RF4A 1EJDA 4EGRA 2PQ9A 3TI2A 2GG6A 4E7CA 3SWDA 3VCYA 1RF5A 2QFTA 3SG1A 2AAYA 3ISSA 1MI4A 3KR6A 2O0BA 3TR1A 1Q36A 3RMTA 3UPKA 3R38A 3V4TA 4FQDA 3SWGA 5BQ2A 1Q3GA 2RL1A 2PQDA 3SWIA 3FJZA 5BS5A 4E7EA 2BJBA 1RYWA 2QFSA 3NVSA 3SPBA 1YBGA 1NAWA 2O0XA 4ZNDA 1RF6A 3FJXA 1G6SA 1DLGA 3KQJA 3FK0A 3ZH4A 2O0ZA 4N3PA 3SU9A
chains in the Genus database with same CATH superfamily
1EJCA 2Z2CA 2YVWA 1P89A 2PQBA 3KQAA 5U4HA 3ZH3A 3SWEA 2GGDA 5BUFA 4R7UA 3PQVA 1G6TA 4E7GA 2O0EA 1A2NA 3ROIA 3TV1A 2O0DA 4O89A 2GGAA 4E7DA 3SLHA 2QFQA 1EYNA 1X8TA 3TUXA 1P88A 3FK1A 3SWQA 2QFUA 1X8RA 4O8JA 3LTHA 2PQCA 2RL2A 1UAEA 2O15A 3SWAA 4EIIA 4GFPA 4E7FA 2GG4A 3V5VA 2AA9A 4E7BA 1RF4A 1EJDA 4EGRA 2PQ9A 3TI2A 2GG6A 4E7CA 3SWDA 3VCYA 1RF5A 1QMIA 4CLQA 2QFTA 3SG1A 2AAYA 3ISSA 1MI4A 3KR6A 2O0BA 3TR1A 1Q36A 3RMTA 3UPKA 3R38A 3V4TA 4FQDA 1QMHA 3SWGA 5BQ2A 1Q3GA 2RL1A 2PQDA 3SWIA 3FJZA 5BS5A 4E7EA 2BJBA 1RYWA 2QFSA 3NVSA 3SPBA 1YBGA 1NAWA 2O0XA 3KGDA 4ZNDA 1RF6A 3FJXA 1G6SA 1DLGA 3KQJA 3FK0A 3ZH4A 2O0ZA 3TW3A 4N3PA 3SU9A 3TUTA
chains in the Genus database with same CATH topology
1EJCA 2Z2CA 2YVWA 1P89A 2PQBA 3KQAA 5U4HA 3ZH3A 3SWEA 2GGDA 5BUFA 4R7UA 1G6TA 4E7GA 2O0EA 1A2NA 3ROIA 2O0DA 2GGAA 4E7DA 3SLHA 2QFQA 1EYNA 1X8TA 1P88A 3FK1A 3SWQA 2QFUA 1X8RA 3LTHA 2PQCA 2RL2A 1UAEA 2O15A 3SWAA 4EIIA 4GFPA 4E7FA 2GG4A 3V5VA 2AA9A 4E7BA 1RF4A 1EJDA 4EGRA 2PQ9A 3TI2A 2GG6A 4E7CA 3SWDA 3VCYA 1RF5A 2QFTA 3SG1A 2AAYA 3ISSA 1MI4A 3KR6A 2O0BA 3TR1A 1Q36A 3RMTA 3UPKA 3R38A 3V4TA 4FQDA 3SWGA 5BQ2A 1Q3GA 2RL1A 2PQDA 3SWIA 3FJZA 5BS5A 4E7EA 2BJBA 1RYWA 2QFSA 3NVSA 3SPBA 1YBGA 1NAWA 2O0XA 4ZNDA 1RF6A 3FJXA 1G6SA 1DLGA 3KQJA 3FK0A 3ZH4A 2O0ZA 4N3PA 3SU9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1EJC A;  2Z2C A;  2YVW A;  1P89 A;  2PQB A;  3KQA A;  5U4H A;  3ZH3 A;  3SWE A;  2GGD A;  5BUF A;  4R7U A;  1G6T A;  4E7G A;  2O0E A;  1A2N A;  3ROI A;  2O0D A;  2GGA A;  4E7D A;  3SLH A;  2QFQ A;  1EYN A;  1X8T A;  1P88 A;  3FK1 A;  3SWQ A;  2QFU A;  1X8R A;  3LTH A;  2PQC A;  2RL2 A;  1UAE A;  2O15 A;  3SWA A;  4EII A;  4GFP A;  4E7F A;  2GG4 A;  3V5V A;  2AA9 A;  4E7B A;  1RF4 A;  1EJD A;  4EGR A;  2PQ9 A;  3TI2 A;  2GG6 A;  4E7C A;  3SWD A;  3VCY A;  1RF5 A;  2QFT A;  3SG1 A;  2AAY A;  3ISS A;  1MI4 A;  3KR6 A;  2O0B A;  3TR1 A;  1Q36 A;  3RMT A;  3UPK A;  3R38 A;  3V4T A;  4FQD A;  3SWG A;  5BQ2 A;  1Q3G A;  2RL1 A;  2PQD A;  3SWI A;  3FJZ A;  5BS5 A;  4E7E A;  2BJB A;  1RYW A;  2QFS A;  3NVS A;  3SPB A;  1YBG A;  1NAW A;  2O0X A;  4ZND A;  1RF6 A;  3FJX A;  1G6S A;  1DLG A;  3KQJ A;  3FK0 A;  3ZH4 A;  2O0Z A;  4N3P A;  3SU9 A; 
#chains in the Genus database with same CATH topology
 1EJC A;  2Z2C A;  2YVW A;  1P89 A;  2PQB A;  3KQA A;  5U4H A;  3ZH3 A;  3SWE A;  2GGD A;  5BUF A;  4R7U A;  3PQV A;  1G6T A;  4E7G A;  2O0E A;  1A2N A;  3ROI A;  3TV1 A;  2O0D A;  4O89 A;  2GGA A;  4E7D A;  3SLH A;  2QFQ A;  1EYN A;  1X8T A;  3TUX A;  1P88 A;  3FK1 A;  3SWQ A;  2QFU A;  1X8R A;  4O8J A;  3LTH A;  2PQC A;  2RL2 A;  1UAE A;  2O15 A;  3SWA A;  4EII A;  4GFP A;  4E7F A;  2GG4 A;  3V5V A;  2AA9 A;  4E7B A;  1RF4 A;  1EJD A;  4EGR A;  2PQ9 A;  3TI2 A;  2GG6 A;  4E7C A;  3SWD A;  3VCY A;  1RF5 A;  1QMI A;  4CLQ A;  2QFT A;  3SG1 A;  2AAY A;  3ISS A;  1MI4 A;  3KR6 A;  2O0B A;  3TR1 A;  1Q36 A;  3RMT A;  3UPK A;  3R38 A;  3V4T A;  4FQD A;  1QMH A;  3SWG A;  5BQ2 A;  1Q3G A;  2RL1 A;  2PQD A;  3SWI A;  3FJZ A;  5BS5 A;  4E7E A;  2BJB A;  1RYW A;  2QFS A;  3NVS A;  3SPB A;  1YBG A;  1NAW A;  2O0X A;  3KGD A;  4ZND A;  1RF6 A;  3FJX A;  1G6S A;  1DLG A;  3KQJ A;  3FK0 A;  3ZH4 A;  2O0Z A;  3TW3 A;  4N3P A;  3SU9 A;  3TUT A; 
#chains in the Genus database with same CATH homology
 1EJC A;  2Z2C A;  2YVW A;  1P89 A;  2PQB A;  3KQA A;  5U4H A;  3ZH3 A;  3SWE A;  2GGD A;  5BUF A;  4R7U A;  1G6T A;  4E7G A;  2O0E A;  1A2N A;  3ROI A;  2O0D A;  2GGA A;  4E7D A;  3SLH A;  2QFQ A;  1EYN A;  1X8T A;  1P88 A;  3FK1 A;  3SWQ A;  2QFU A;  1X8R A;  3LTH A;  2PQC A;  2RL2 A;  1UAE A;  2O15 A;  3SWA A;  4EII A;  4GFP A;  4E7F A;  2GG4 A;  3V5V A;  2AA9 A;  4E7B A;  1RF4 A;  1EJD A;  4EGR A;  2PQ9 A;  3TI2 A;  2GG6 A;  4E7C A;  3SWD A;  3VCY A;  1RF5 A;  2QFT A;  3SG1 A;  2AAY A;  3ISS A;  1MI4 A;  3KR6 A;  2O0B A;  3TR1 A;  1Q36 A;  3RMT A;  3UPK A;  3R38 A;  3V4T A;  4FQD A;  3SWG A;  5BQ2 A;  1Q3G A;  2RL1 A;  2PQD A;  3SWI A;  3FJZ A;  5BS5 A;  4E7E A;  2BJB A;  1RYW A;  2QFS A;  3NVS A;  3SPB A;  1YBG A;  1NAW A;  2O0X A;  4ZND A;  1RF6 A;  3FJX A;  1G6S A;  1DLG A;  3KQJ A;  3FK0 A;  3ZH4 A;  2O0Z A;  4N3P A;  3SU9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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