3RPJA

Structure of a curlin genes transcriptional regulator protein from proteus mirabilis hi4320.
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
127
structure length
126
Chain Sequence
LHPTRGKLLKRFAQIGPYIREQQCESQFFFDCLAVCVNKKVTPEKREFWGWWMELERNGEQLIYYYQVGLFDKNGDWVNQVISKKDVIESIHETLIRFHDFLQAAVSELEMTLVPDEKMSNFPLPL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription regulator
source organism Proteus mirabilis
publication title Structure of a curlin genes transcriptional regulator protein from Proteus mirabilis HI4320.
rcsb
molecule keywords Curlin genes transcriptional regulator
total genus 32
structure length 126
sequence length 127
chains with identical sequence B
ec nomenclature
pdb deposition date 2011-04-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07417 Crl Sigma factor-binding transcriptional regulator Crl
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.310.230 Alpha Beta 2-Layer Sandwich TATA-Binding Protein TATA-Binding Protein 3rpjA00
3RPJA 4Q11A 2MZ8A
chains in the Genus database with same CATH superfamily
3F10A 4CFFA 1KY6A 4ROCB 3CWSA 4DULA 2FKFA 2QREA 1UT4A 2NOHA 3EIKA 1QTPA 3ENOC 4BJUA 2NLVA 1PCJX 1PVSA 1KYUA 1EUVA 2NOBA 4I8OA 5BMPA 1HU0A 3N89A 1QTSA 1KFQA 1V5SA 2DKCA 1Q9UA 1JFIC 1UL7A 3OH9A 1KYFA 4EAKA 2YA3A 1P5DX 3TDHA 2OOYA 5HSHA 3OCIA 5JMVD 1JDYA 1VKLA 1QNBA 4EAIA 2QRDA 5F9CA 2D0BA 2QR1A 1NH2A 1UT7A 1LWWA 3TE5A 1QN7A 3OH6A 1QNCA 1QN9A 2D0CA 1E42A 3IH7A 2NOIA 1YQRA 2FUVA 3F0ZA 1VOKA 2JHNA 4ROEB 2V8QA 4D7QA 1KYDA 1N3CA 4EJYA 3D7QA 4EAJA 3CWAA 2NOZA 2IV8A 1T6AA 4TPSA 1QNEA 2JPIA 2JHJA 1FN7A 1VTLE 3EAYA 1VOLB 1TGHA 1YQKA 2NOLA 4PY5A 1TUOA 2Z0FA 2HL8A 2LAEA 1P5GX 3OSMA 5KL0A 2JOIA 1J3MA 1QN3A 3OC3C 1RM1A 3I0WA 2O3OA 1QN4A 5BMNA 2DKAA 5EPCA 5IYCP 1M3QA 3OSTA 3CVTA 2HZMA 4MRQA 2HZSA 3KTUA 1KY7A 2HKPA 3CWTA 2VJ0A 2NOFA 3CWUA 3ULXA 1MPGA 2FKMX 3OLPA 1MP9A 4Q11A 2V9JA 1CDWA 4WX8A 3D4VA 2DKDA 1YTBA 3HS9A 1AISA 1QNAA 3C04A 1NGMA 3KRMA 2H5AX 2MJ7A 1YQLA 1WQAA 2PWWA 1PCZA 2ZFDB 1N39A 5AN4A 3NA5A 2NWVA 3DPTA 1M3HA 1VTOA 2G30A 4WXAA 1DIZA 3CW7A 2XHIA 4IL8A 3BKQX 3T4NA 3CVSA 3I0XA 1KO9A 3SNSA 2FGTA 2Y8LA 4D7RA 1C4GA 1WJWA 2NVMA 1EBMA 1QN6A 3I3WA 3ASMA 1QN8A 4RODB 1LXTA 4C7PA 2EHBD 1KFIA 1R4XA 3ENCA 2NOEA 2YH5A 1NVPA 4EALA 1K2YX 3OSEA 3PDKA 3H1ZA 3VN5A 3UW2A 3HS8A 1K35A 1C9BB 3OGDA 1LWVA 5IYBP 2F7LA 3RPJA 2V92A 1PZDA 1M5Q1 1B9KA 1PCMX 3PMGA 3RSMA 1C47A 2HL9A 3DPUA 2IV9A 2Y8QA 4WZSD 1YQMA 1QN5A 1W80A 1XSZA 2QRCA 2R5XA 2I5WA 4EJZA 2H4LX 5IYDP 2MZ8A 2QLVA 1YTFA 4HJHA 4QG5A 1LWYA 1TBAB 1N3AA 2D0AA 5JN5A 4EAGA 1D3UA 4B0AA 1TBPA 2OOXA 2Z8UA
chains in the Genus database with same CATH topology
3F10A 1KY6A 4ROCB 4DULA 1UT4A 2NOHA 3EIKA 1QTPA 1KYUA 2NOBA 4I8OA 1HU0A 3N89A 1QTSA 1JFIC 1KYFA 3OCIA 1QNBA 2D0BA 1NH2A 1QN7A 1UT7A 1LWWA 1QNCA 1QN9A 2D0CA 1E42A 3IH7A 2NOIA 1YQRA 3F0ZA 1VOKA 4ROEB 1KYDA 1N3CA 4EJYA 2NOZA 2IV8A 4TPSA 1QNEA 1FN7A 1VTLE 1VOLB 1TGHA 1YQKA 2NOLA 4PY5A 2LAEA 3OSMA 2JOIA 1QN3A 3OC3C 1RM1A 3I0WA 2O3OA 1QN4A 5IYCP 1M3QA 3OSTA 2HZMA 2HZSA 3KTUA 1KY7A 2VJ0A 3ULXA 4Q11A 1MP9A 1CDWA 1YTBA 3HS9A 1AISA 1QNAA 1NGMA 3KRMA 2MJ7A 1YQLA 1N39A 1PCZA 2NOFA 5AN4A 3DPTA 1M3HA 1VTOA 2G30A 2XHIA 3I0XA 1KO9A 3SNSA 2FGTA 1EBMA 1QN6A 3ASMA 1QN8A 4RODB 1R4XA 2NOEA 2YH5A 1NVPA 3H1ZA 3VN5A 3HS8A 1C9BB 1LWVA 5IYBP 3RPJA 1PZDA 1B9KA 1QN5A 4WZSD 3DPUA 2IV9A 1YQMA 2I5WA 1W80A 4EJZA 5IYDP 2MZ8A 1YTFA 1LWYA 1TBAB 1N3AA 2D0AA 1D3UA 4B0AA 1TBPA 2Z8UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RPJ A;  4Q11 A;  2MZ8 A; 
#chains in the Genus database with same CATH topology
 3F10 A;  4CFF A;  1KY6 A;  4ROC B;  3CWS A;  4DUL A;  2FKF A;  2QRE A;  1UT4 A;  2NOH A;  3EIK A;  1QTP A;  3ENO C;  4BJU A;  2NLV A;  1PCJ X;  1PVS A;  1KYU A;  1EUV A;  2NOB A;  4I8O A;  5BMP A;  1HU0 A;  3N89 A;  1QTS A;  1KFQ A;  1V5S A;  2DKC A;  1Q9U A;  1JFI C;  1UL7 A;  3OH9 A;  1KYF A;  4EAK A;  2YA3 A;  1P5D X;  3TDH A;  2OOY A;  5HSH A;  3OCI A;  5JMV D;  1JDY A;  1VKL A;  1QNB A;  4EAI A;  2QRD A;  5F9C A;  2D0B A;  2QR1 A;  1NH2 A;  1UT7 A;  1LWW A;  3TE5 A;  1QN7 A;  3OH6 A;  1QNC A;  1QN9 A;  2D0C A;  1E42 A;  3IH7 A;  2NOI A;  1YQR A;  2FUV A;  3F0Z A;  1VOK A;  2JHN A;  4ROE B;  2V8Q A;  4D7Q A;  1KYD A;  1N3C A;  4EJY A;  3D7Q A;  4EAJ A;  3CWA A;  2NOZ A;  2IV8 A;  1T6A A;  4TPS A;  1QNE A;  2JPI A;  2JHJ A;  1FN7 A;  1VTL E;  3EAY A;  1VOL B;  1TGH A;  1YQK A;  2NOL A;  4PY5 A;  1TUO A;  2Z0F A;  2HL8 A;  2LAE A;  1P5G X;  3OSM A;  5KL0 A;  2JOI A;  1J3M A;  1QN3 A;  3OC3 C;  1RM1 A;  3I0W A;  2O3O A;  1QN4 A;  5BMN A;  2DKA A;  5EPC A;  5IYC P;  1M3Q A;  3OST A;  3CVT A;  2HZM A;  4MRQ A;  2HZS A;  3KTU A;  1KY7 A;  2HKP A;  3CWT A;  2VJ0 A;  2NOF A;  3CWU A;  3ULX A;  1MPG A;  2FKM X;  3OLP A;  1MP9 A;  4Q11 A;  2V9J A;  1CDW A;  4WX8 A;  3D4V A;  2DKD A;  1YTB A;  3HS9 A;  1AIS A;  1QNA A;  3C04 A;  1NGM A;  3KRM A;  2H5A X;  2MJ7 A;  1YQL A;  1WQA A;  2PWW A;  1PCZ A;  2ZFD B;  1N39 A;  5AN4 A;  3NA5 A;  2NWV A;  3DPT A;  1M3H A;  1VTO A;  2G30 A;  4WXA A;  1DIZ A;  3CW7 A;  2XHI A;  4IL8 A;  3BKQ X;  3T4N A;  3CVS A;  3I0X A;  1KO9 A;  3SNS A;  2FGT A;  2Y8L A;  4D7R A;  1C4G A;  1WJW A;  2NVM A;  1EBM A;  1QN6 A;  3I3W A;  3ASM A;  1QN8 A;  4ROD B;  1LXT A;  4C7P A;  2EHB D;  1KFI A;  1R4X A;  3ENC A;  2NOE A;  2YH5 A;  1NVP A;  4EAL A;  1K2Y X;  3OSE A;  3PDK A;  3H1Z A;  3VN5 A;  3UW2 A;  3HS8 A;  1K35 A;  1C9B B;  3OGD A;  1LWV A;  5IYB P;  2F7L A;  3RPJ A;  2V92 A;  1PZD A;  1M5Q 1;  1B9K A;  1PCM X;  3PMG A;  3RSM A;  1C47 A;  2HL9 A;  3DPU A;  2IV9 A;  2Y8Q A;  4WZS D;  1YQM A;  1QN5 A;  1W80 A;  1XSZ A;  2QRC A;  2R5X A;  2I5W A;  4EJZ A;  2H4L X;  5IYD P;  2MZ8 A;  2QLV A;  1YTF A;  4HJH A;  4QG5 A;  1LWY A;  1TBA B;  1N3A A;  2D0A A;  5JN5 A;  4EAG A;  1D3U A;  4B0A A;  1TBP A;  2OOX A;  2Z8U A; 
#chains in the Genus database with same CATH homology
 3F10 A;  1KY6 A;  4ROC B;  4DUL A;  1UT4 A;  2NOH A;  3EIK A;  1QTP A;  1KYU A;  2NOB A;  4I8O A;  1HU0 A;  3N89 A;  1QTS A;  1JFI C;  1KYF A;  3OCI A;  1QNB A;  2D0B A;  1NH2 A;  1QN7 A;  1UT7 A;  1LWW A;  1QNC A;  1QN9 A;  2D0C A;  1E42 A;  3IH7 A;  2NOI A;  1YQR A;  3F0Z A;  1VOK A;  4ROE B;  1KYD A;  1N3C A;  4EJY A;  2NOZ A;  2IV8 A;  4TPS A;  1QNE A;  1FN7 A;  1VTL E;  1VOL B;  1TGH A;  1YQK A;  2NOL A;  4PY5 A;  2LAE A;  3OSM A;  2JOI A;  1QN3 A;  3OC3 C;  1RM1 A;  3I0W A;  2O3O A;  1QN4 A;  5IYC P;  1M3Q A;  3OST A;  2HZM A;  2HZS A;  3KTU A;  1KY7 A;  2VJ0 A;  3ULX A;  4Q11 A;  1MP9 A;  1CDW A;  1YTB A;  3HS9 A;  1AIS A;  1QNA A;  1NGM A;  3KRM A;  2MJ7 A;  1YQL A;  1N39 A;  1PCZ A;  2NOF A;  5AN4 A;  3DPT A;  1M3H A;  1VTO A;  2G30 A;  2XHI A;  3I0X A;  1KO9 A;  3SNS A;  2FGT A;  1EBM A;  1QN6 A;  3ASM A;  1QN8 A;  4ROD B;  1R4X A;  2NOE A;  2YH5 A;  1NVP A;  3H1Z A;  3VN5 A;  3HS8 A;  1C9B B;  1LWV A;  5IYB P;  3RPJ A;  1PZD A;  1B9K A;  1QN5 A;  4WZS D;  3DPU A;  2IV9 A;  1YQM A;  2I5W A;  1W80 A;  4EJZ A;  5IYD P;  2MZ8 A;  1YTF A;  1LWY A;  1TBA B;  1N3A A;  2D0A A;  1D3U A;  4B0A A;  1TBP A;  2Z8U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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