3RPJA

Structure of a curlin genes transcriptional regulator protein from proteus mirabilis hi4320.
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
127
structure length
126
Chain Sequence
b'LHPTRGKLLKRFAQIGPYIREQQCESQFFFDCLAVCVNKKVTPEKREFWGWWMELERNGEQLIYYYQVGLFDKNGDWVNQVISKKDVIESIHETLIRFHDFLQAAVSELEMTLVPDEKMSNFPLPL'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure of a curlin genes transcriptional regulator protein from Proteus mirabilis HI4320.
rcsb
molecule keywords Curlin genes transcriptional regulator
source organism Proteus mirabilis
molecule tags Transcription regulator
total genus 32
structure length 126
sequence length 127
chains with identical sequence B
ec nomenclature
pdb deposition date 2011-04-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07417 Crl Sigma factor-binding transcriptional regulator Crl
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.310.230 Alpha Beta 2-Layer Sandwich TATA-Binding Protein TATA-Binding Protein 3rpjA00
2MZ8A 4Q11A 3RPJA
chains in the Genus database with same CATH superfamily
2JHNA 1KO9A 2DKCA 2MZ8A 2QLVA 1KYDA 2FKMX 2QRCA 2FGTA 3H1ZA 2NOLA 2JPIA 3RSMA 3ULXA 2V8QA 2HZMA 2Y8QA 1LXTA 1PZDA 2O3OA 1TBAB 3RPJA 1VTLE 2NOHA 4EALA 1KYFA 2QREA 3I0XA 5EPCA 2PWWA 3T4NA 1LWYA 4EJYA 1EUVA 2NWVA 1MPGA 1D3UA 1QN5A 5JN5A 3ASMA 4IL8A 1VTOA 1AISA 1M5Q1 1MP9A 4C7PA 5BMNA 2EHBD 3OLPA 4ROEB 3C04A 1QTPA 1TBPA 2G30A 2I5WA 2MJ7A 1KYUA 2IV9A 4CFFA 3KTUA 2JOIA 3D4VA 5IYBP 4DULA 1KY6A 3HS8A 2HKPA 3EIKA 1W80A 1WQAA 1QN6A 5AN4A 1VOLB 2FKFA 1PVSA 1N3CA 1UL7A 1RM1A 2D0BA 1VOKA 1JFIC 4I8OA 2NLVA 4EAGA 4Q11A 3OGDA 5KL0A 3CWSA 1QNCA 1K2YX 3VN5A 3TE5A 1NVPA 1C9BB 1DIZA 3EAYA 4WZSD 2OOXA 1YQRA 2DKDA 5IYCP 4HJHA 1P5GX 1T6AA 2H4LX 3I3WA 1KY7A 3NA5A 1TGHA 1UT4A 2XHIA 3CWAA 2HL8A 3OC3C 1LWVA 1KFQA 1WJWA 3OSEA 3F0ZA 1YQKA 1HU0A 2Y8LA 3BKQX 3D7QA 2V9JA 2OOYA 1PCJX 2HZSA 2V92A 3DPUA 4B0AA 3OCIA 1QN7A 3PDKA 4D7QA 3ENCA 1QTSA 4TPSA 4D7RA 2D0CA 3CW7A 2DKAA 4RODB 1EBMA 2QRDA 1E42A 3ENOC 5JMVD 1K35A 1QN9A 2D0AA 1QN3A 1R4XA 5F9CA 2NOIA 4EAKA 2QR1A 3OSTA 1JDYA 2IV8A 2JHJA 2Z0FA 5BMPA 4EAJA 1YQLA 2NOEA 2YH5A 1V5SA 3TDHA 1PCZA 1M3HA 1M3QA 4PY5A 3PMGA 4WX8A 3CVSA 2ZFDB 1QNAA 3CVTA 2NVMA 1PCMX 1N39A 3KRMA 1N3AA 3HS9A 3SNSA 1C47A 2H5AX 1LWWA 2LAEA 3I0WA 1NGMA 2VJ0A 1TUOA 3UW2A 1Q9UA 2NOBA 2Z8UA 2R5XA 3IH7A 4BJUA 2HL9A 1QNEA 1YTFA 3CWTA 1B9KA 2NOFA 1QN4A 3F10A 3OH6A 1FN7A 1YTBA 1QNBA 3CWUA 4WXAA 1C4GA 2F7LA 4ROCB 1KFIA 5IYDP 4EJZA 4EAIA 1P5DX 3OSMA 5HSHA 2NOZA 1XSZA 1YQMA 3DPTA 3OH9A 3N89A 1QN8A 1CDWA 1J3MA 1UT7A 1VKLA 4MRQA 4QG5A 1NH2A 2YA3A 2FUVA
chains in the Genus database with same CATH topology
1KO9A 2MZ8A 1KYDA 3H1ZA 2FGTA 2NOLA 3ULXA 3RPJA 2HZMA 1PZDA 2O3OA 1TBAB 1VTLE 2NOHA 1KYFA 3I0XA 1LWYA 4EJYA 1D3UA 1QN5A 3ASMA 1VTOA 1AISA 1MP9A 4ROEB 2I5WA 1QTPA 1TBPA 2G30A 2MJ7A 1KYUA 2IV9A 3KTUA 2JOIA 5IYBP 4DULA 1KY6A 3HS8A 3EIKA 1W80A 1VOLB 1QN6A 5AN4A 1N3CA 1RM1A 2D0BA 1VOKA 1JFIC 4I8OA 4Q11A 1QNCA 3VN5A 1NVPA 1C9BB 4WZSD 1YQRA 5IYCP 1KY7A 1TGHA 1UT4A 2XHIA 3OC3C 1LWVA 3F0ZA 1YQKA 1HU0A 3DPUA 2HZSA 4B0AA 3OCIA 1QN7A 4TPSA 1QTSA 2D0CA 4RODB 1EBMA 1E42A 1QN9A 2D0AA 1QN3A 1R4XA 2NOIA 3OSTA 1YQLA 2IV8A 2NOEA 2YH5A 1PCZA 1M3HA 1M3QA 4PY5A 1QNAA 1N39A 3KRMA 1N3AA 3HS9A 3SNSA 1LWWA 2LAEA 3I0WA 1NGMA 2VJ0A 2NOBA 2Z8UA 3IH7A 1QNEA 1YTFA 1B9KA 2NOFA 1QN4A 3F10A 1FN7A 1YTBA 1QNBA 4ROCB 5IYDP 4EJZA 2NOZA 3OSMA 1YQMA 3DPTA 3N89A 1QN8A 1CDWA 1UT7A 1NH2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2MZ8 A;  4Q11 A;  3RPJ A; 
#chains in the Genus database with same CATH topology
 2JHN A;  1KO9 A;  2DKC A;  2MZ8 A;  2QLV A;  1KYD A;  2FKM X;  2QRC A;  2FGT A;  3H1Z A;  2NOL A;  2JPI A;  3RSM A;  3ULX A;  2V8Q A;  2HZM A;  2Y8Q A;  1LXT A;  1PZD A;  2O3O A;  1TBA B;  3RPJ A;  1VTL E;  2NOH A;  4EAL A;  1KYF A;  2QRE A;  3I0X A;  5EPC A;  2PWW A;  3T4N A;  1LWY A;  4EJY A;  1EUV A;  2NWV A;  1MPG A;  1D3U A;  1QN5 A;  5JN5 A;  3ASM A;  4IL8 A;  1VTO A;  1AIS A;  1M5Q 1;  1MP9 A;  4C7P A;  5BMN A;  2EHB D;  3OLP A;  4ROE B;  3C04 A;  1QTP A;  1TBP A;  2G30 A;  2I5W A;  2MJ7 A;  1KYU A;  2IV9 A;  4CFF A;  3KTU A;  2JOI A;  3D4V A;  5IYB P;  4DUL A;  1KY6 A;  3HS8 A;  2HKP A;  3EIK A;  1W80 A;  1WQA A;  1QN6 A;  5AN4 A;  1VOL B;  2FKF A;  1PVS A;  1N3C A;  1UL7 A;  1RM1 A;  2D0B A;  1VOK A;  1JFI C;  4I8O A;  2NLV A;  4EAG A;  4Q11 A;  3OGD A;  5KL0 A;  3CWS A;  1QNC A;  1K2Y X;  3VN5 A;  3TE5 A;  1NVP A;  1C9B B;  1DIZ A;  3EAY A;  4WZS D;  2OOX A;  1YQR A;  2DKD A;  5IYC P;  4HJH A;  1P5G X;  1T6A A;  2H4L X;  3I3W A;  1KY7 A;  3NA5 A;  1TGH A;  1UT4 A;  2XHI A;  3CWA A;  2HL8 A;  3OC3 C;  1LWV A;  1KFQ A;  1WJW A;  3OSE A;  3F0Z A;  1YQK A;  1HU0 A;  2Y8L A;  3BKQ X;  3D7Q A;  2V9J A;  2OOY A;  1PCJ X;  2HZS A;  2V92 A;  3DPU A;  4B0A A;  3OCI A;  1QN7 A;  3PDK A;  4D7Q A;  3ENC A;  1QTS A;  4TPS A;  4D7R A;  2D0C A;  3CW7 A;  2DKA A;  4ROD B;  1EBM A;  2QRD A;  1E42 A;  3ENO C;  5JMV D;  1K35 A;  1QN9 A;  2D0A A;  1QN3 A;  1R4X A;  5F9C A;  2NOI A;  4EAK A;  2QR1 A;  3OST A;  1JDY A;  2IV8 A;  2JHJ A;  2Z0F A;  5BMP A;  4EAJ A;  1YQL A;  2NOE A;  2YH5 A;  1V5S A;  3TDH A;  1PCZ A;  1M3H A;  1M3Q A;  4PY5 A;  3PMG A;  4WX8 A;  3CVS A;  2ZFD B;  1QNA A;  3CVT A;  2NVM A;  1PCM X;  1N39 A;  3KRM A;  1N3A A;  3HS9 A;  3SNS A;  1C47 A;  2H5A X;  1LWW A;  2LAE A;  3I0W A;  1NGM A;  2VJ0 A;  1TUO A;  3UW2 A;  1Q9U A;  2NOB A;  2Z8U A;  2R5X A;  3IH7 A;  4BJU A;  2HL9 A;  1QNE A;  1YTF A;  3CWT A;  1B9K A;  2NOF A;  1QN4 A;  3F10 A;  3OH6 A;  1FN7 A;  1YTB A;  1QNB A;  3CWU A;  4WXA A;  1C4G A;  2F7L A;  4ROC B;  1KFI A;  5IYD P;  4EJZ A;  4EAI A;  1P5D X;  3OSM A;  5HSH A;  2NOZ A;  1XSZ A;  1YQM A;  3DPT A;  3OH9 A;  3N89 A;  1QN8 A;  1CDW A;  1J3M A;  1UT7 A;  1VKL A;  4MRQ A;  4QG5 A;  1NH2 A;  2YA3 A;  2FUV A; 
#chains in the Genus database with same CATH homology
 1KO9 A;  2MZ8 A;  1KYD A;  3H1Z A;  2FGT A;  2NOL A;  3ULX A;  3RPJ A;  2HZM A;  1PZD A;  2O3O A;  1TBA B;  1VTL E;  2NOH A;  1KYF A;  3I0X A;  1LWY A;  4EJY A;  1D3U A;  1QN5 A;  3ASM A;  1VTO A;  1AIS A;  1MP9 A;  4ROE B;  2I5W A;  1QTP A;  1TBP A;  2G30 A;  2MJ7 A;  1KYU A;  2IV9 A;  3KTU A;  2JOI A;  5IYB P;  4DUL A;  1KY6 A;  3HS8 A;  3EIK A;  1W80 A;  1VOL B;  1QN6 A;  5AN4 A;  1N3C A;  1RM1 A;  2D0B A;  1VOK A;  1JFI C;  4I8O A;  4Q11 A;  1QNC A;  3VN5 A;  1NVP A;  1C9B B;  4WZS D;  1YQR A;  5IYC P;  1KY7 A;  1TGH A;  1UT4 A;  2XHI A;  3OC3 C;  1LWV A;  3F0Z A;  1YQK A;  1HU0 A;  3DPU A;  2HZS A;  4B0A A;  3OCI A;  1QN7 A;  4TPS A;  1QTS A;  2D0C A;  4ROD B;  1EBM A;  1E42 A;  1QN9 A;  2D0A A;  1QN3 A;  1R4X A;  2NOI A;  3OST A;  1YQL A;  2IV8 A;  2NOE A;  2YH5 A;  1PCZ A;  1M3H A;  1M3Q A;  4PY5 A;  1QNA A;  1N39 A;  3KRM A;  1N3A A;  3HS9 A;  3SNS A;  1LWW A;  2LAE A;  3I0W A;  1NGM A;  2VJ0 A;  2NOB A;  2Z8U A;  3IH7 A;  1QNE A;  1YTF A;  1B9K A;  2NOF A;  1QN4 A;  3F10 A;  1FN7 A;  1YTB A;  1QNB A;  4ROC B;  5IYD P;  4EJZ A;  2NOZ A;  3OSM A;  1YQM A;  3DPT A;  3N89 A;  1QN8 A;  1CDW A;  1UT7 A;  1NH2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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