3S16C

Rna polymerase ii initiation complex with an 8-nt rna
Total Genus 56
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
56
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 56
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s16C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s16C01
4A3EK 3M4OK 4BBSC 4X6AC 3HOXC 2JA6C 5TMCA 4C3HK 3CQZK 3S17C 3GTQK 4A3DK 5C3EK 4MEXA 4A93C 1ZYRA 4LLGA 3S1RK 4LJZA 5IYCC 2Y0SL 4OINA 5IP9C 3EQLA 2JA8C 3K7AK 3S14C 1WCMC 4JK1A 5IYBK 2R93C 2E2IK 3HOXK 4A3MC 2JA6K 2WAQD 4GZYA 1Y1VK 3S2HC 4Y7NK 4A3DC 1I50C 3S1MK 4C3IK 2JA7C 2VUMC 3GTMC 5IP7C 4G7HA 1TWAC 4LK1A 2WB1L 4C2MC 4BBRC 2R92C 3I4NK 2A69A 4A3CC 4AYBL 3FKIC 4KMUA 1HQMA 1IW7A 2PMZL 5IYBC 3DXJA 5TMFA 2NVQC 3S2DC 4BXXC 1I6HC 1WCMK 4OIOA 2A6HA 4BBRK 2JA5C 3S15C 4A3GC 1I50K 3S2HK 2R7ZC 2E2HK 2NVQK 5D4DA 3GTOK 5M3FK 3HOWK 1I3QC 2NVXK 3GTQC 1K83C 4YFNA 3CQZC 5C4XK 4A3FC 1R9TC 3H0GK 1SFOC 3GTKK 4MQ9A 3GTLC 1K83K 3HOUK 5IP9K 3HOZC 3H0GC 1TWGK 1R9TK 3S17K 4C3HC 1XPPA 5C3EC 3HOUC 4OIQA 1BDFA 2YU9K 5C44C 3PO2K 1YNNA 4C3IC 2O5IA 3HKZL 4A3FK 2YU9C 4QIWL 2NVTK 4C3JK 1Y1WK 3WODA 4C2MK 3S1QC 2A68A 3M3YC 2PA8L 4G7OA 1YNJA 2E2JC 1TWFC 3GTJC 3S1MC 4Y52K 4KN4A 3RZDK 5IP7K 1I6HK 4A3LC 3H3VD 3S16K 4A3BK 4A3CK 5IYDC 4XLNA 3HOWC 4A3LK 4OIPA 4Y52C 4QIWD 3GTPK 5FJ8K 3GTJK 2PPBA 3GTKC 5C4JK 4A3JK 3GTGK 1TWGC 4NOIA 3HOZK 4YG2A 4BY7C 3HOYC 5FLMC 4XLPA 4A3IK 1SFOK 3GTMK 4BBSK 4YFKA 3H3VL 3HKZD 4BY7K 4BY1C 4XSZA 3RZOC 3I4NC 2O5JA 4QJVB 2B63K 2R92K 4OIRA 4A93K 3GTOC 5C4XC 3S1NC 3FKIK 2A6EA 4A3JC 4QJVA 3HOVK 3RZOK 3M4OC 2JA8K 2JA5K 3S15K 5M3MK 1TWFK 2E2JK 3PO2C 1TWCK 3HOVC 4A3IC 2NVYK 5FLMK 2E2IC 5IYCK 2R93K 1Y1WC 2NVXC 4YFXA 2NVTC 4BY1K 4A3BC 2PMZD 4KN7A 4AYBD 3I4MC 1TWHK 3S14K 2JA7K 3K7AC 2VUMK 3RZDC 2PA8D 4Q4ZA 3GTLK 4G7ZA 1Y1VC 2CW0A 4Y7NC 4A3KK 4A3MK 3S16C 3I4MK 3PO3K 4XSXA 2BE5A 2NVYC 5C4JC 3GTGC 1TWCC 5M5WK 5IYDK 2WAQL 4MEYA 4A3EC 4A3GK 1TWAK 1I6VA 3PO3C 3GTPC 2E2HC 2R7ZK 5C44K 1TWHC 3HOYK 2WB1D 3S1RC 4ZH4A 4LK0A 4Q5SA 4C3JC 1I3QK 3S2DK 2Y0SD 4BXXK 3M3YK 5M5YK 3S1QK 5M5XK 4A3KC 2B63C 4X6AK 1SMYA 3S1NK
chains in the Genus database with same CATH superfamily
1PJ5A 4WF9S 4X6AC 4C3HK 4KM8A 4BLAA 4A3DK 4MEXA 2V6SA 5IYCC 4OINA 1O25A 1WCMC 1G51A 5IYBK 1Y1VK 3S1MK 4IOAS 3AD9C 3CQZA 4LK1A 2WB1L 4C2MC 2A69A 2R7ZA 3TFHA 4AYBL 4KMUA 3DLLS 1DD5A 2KWAA 1O28A 4BXXC 2NVQC 1XZQB 4BBRK 4KARA 2XCQA 5TJ3A 2V6TA 4RMFA 5M3FK 3OREA 2CFAB 3GTQC 1BJTA 4KB4A 1JQWA 5IP9K 1R9TK 4FZBA 2KQ1A 1VJEA 2O5IA 2NVTK 4GT9A 1Y1WK 4C2MK 3GTGA 2A68A 3NUHA 4LR2A 1I6HK 4A3BK 5IYDC 2L3UA 1F7VA 1EI6A 4A3LK 1O2AA 4QIWD 3GTJK 4WJ4A 3GTKC 2RGRA 1TWGC 2Y3PA 4YG2A 4BY7C 2D6FC 5FLMC 4A3IK 1JVIA 1EK8A 5HL7S 4YFKA 1K83A 1RU0A 3IPJA 3RZOC 4A93K 1WOPA 3G4AA 4OIRA 3Q3QA 3GTOC 4P9SA 1YX2A 3FKIK 3M4OC 3S15K 3CF5S 4J3NA 4A3IC 5FLMK 1J98A 4YFXA 3QX3A 1IQ0A 4A3BC 2P5MA 1ISEA 2JA7K 3K7AC 3RZDC 5JVGS 4G7ZA 2CW0A 1F9NA 4A3KK 3I4MK 1DCOA 3BP3A 1VGXA 4IOCS 5IYDK 2WAQL 1I6VA 2E2HC 1TWHC 3S1RC 4ZH4A 2Y0SD 3GSIA 3SZZA 2O5JA 2B63C 4WFBS 5DM7S 2ZJPS 1ZQ1C 2JA6C 5EGHA 5CHPA 1IS1A 4KDDA 1ZYRA 4LJZA 1INNA 5JVOA 5IP9C 3EQLA 2JA8C 1O29A 1TWFA 4KMAA 3K7AK 3S14C 5IORA 1SFOA 4GZYA 4Y7NK 3S2HC 2VUMC 3GTMC 1Y1WA 5IP7C 2EBBA 1TWAC 1ZXOA 4BBRC 2R92C 1EH1A 3I4NK 4P5AA 3S1NK 3N0BA 3GTOK 3DXJA 1AB4A 1DCPA 1WQFA 4OIOA 2JA5C 4A3GC 1R9TA 2E2HK 2NVQK 2VUMA 2YU9A 4A3FC 2W7VA 1SFOC 3GTKK 4MQ9A 2FQTA 3T00A 3HOUK 3H0GC 3S17K 5EGEA 3A8IA 4GTAA 3HXAA 3PO2K 1YNNA 2YU9C 1FEUA 1XZPB 3WODA 3AQOA 3M3YC 4G7OA 3GTKA 3V4GA 2NVYA 1TWFC 3S1MC 3RZDK 1VLOA 3GTLA 3A8JA 2GSNA 4A3LC 3H3VD 1TWHA 4A3CK 2E2HA 4XLNA 2R92A 3T02A 4GTFA 1J6VA 2E2IA 2B63A 3AH5A 1V5VA 1VRQC 4NOIA 3HOZK 4WFAS 4WILA 4XLPA 1I3QA 4M1XA 1SFOK 3GTMK 3H3VL 4BY7K 4BY1C 3MMLB 2GAGC 3S1NC 2A6EA 4A3JC 1I50A 4G0UA 3LAJA 3CAGA 2JA5K 1TWFK 5DM6S 1TWCK 3GEHA 2E2IC 2R93K 1Y1WC 3LAPA 1TWAA 1XZQA 4KN7A 3S14K 1BS2A 2VUMK 2PA8D 1XXCA 2JA6A 4Y52K 4Y7NC 3GEEA 4A3MK 4XSXA 2CFAA 2NVYC 5C4JC 3GTGC 1WOSA 2GAHC 3TFIA 2XCRB 3GTJA 4A3EC 1TWAK 5C44K 1USMA 3L4KA 3T01A 4G0WA 1ZBSA 4BXXK 5CJ9A 5M5XK 4A3KC 4LQYA 4GFQA 1ZVUA 4A3EK 4BBSC 3S0XA 3HOXC 1O27A 4KMDA 1XZPA 3CQZK 3S17C 3GTQK 3AD8C 5C3EK 4LLGA 3S1RK 2Y0SL 4O2DA 4PAAA 4JK1A 1WSVA 2R93C 2E2IK 1IE0A 3HOXK 4A3MC 2WAQD 4ILDA 4A3DC 4C3IK 2JA7C 3A8KA 3PIPS 4GTEA 4A3CC 3FKIC 2PMZL 4P5BA 3GEIA 5C4XK 1WCMK 5IYBC 5TMFA 3S2DC 3S15C 4C45A 3JSTA 2R93A 1J6WA 3S2HK 1B4BA 5D4DA 1O24A 2JA7A 3VA7A 2NVXK 1K83C 4YFNA 3H0GK 4GTDA 3GTLC 3G4CA 3HOZC 1TWGK 4C3HC 1XPPA 5C3EC 4KAWX 3HOUC 4OIQA 1BDFA 2YU9K 4C3IC 1BGWA 3HKZL 4A3FK 5JVHS 4QIWL 1C0AA 4C3JK 3S1QC 2PA8L 1WSRA 3PIOS 3GTJC 1YCLA 4KN4A 3GDZA 5IP7K 4G0VA 3S16K 1HI9A 4IO9S 4OIPA 3FOFA 4Y52C 3GTPK 5FJ8K 1O2FB 2JA5A 2GSUA 4AH6A 1IL2A 3HOYC 4WFNS 1WIHA 4BBSK 3TTGA 2FQOA 4QJVB 4XSZA 3I4NC 4GTCA 3L4JA 1WORA 1JOEA 1WOOA 4QJVA 2ZFZA 2L5NA 3ADAC 3OEPA 2JA8K 5HL8A 3AD7C 1WCMA 2E2JK 3HOVC 3BP8C 5L46A 4KB2A 5IYCK 4BKWA 2NVTC 4BLBA 2PMZD 4DDQA 4AYBD 1TWHK 4Q4ZA 2KPUA 3GTLK 1Y1VC 3PO3K 1B4AA 2BE5A 1TWCC 4KC6A 4A3GK 2R7ZK 3HOYK 4XCHA 3GTQA 3LYWA 2NVXA 3M3YK 1USOA 3S1QK 4X6AK 3H0GA 1Y1VA 1SMYA 4U67S 1IBAA 4FM9A 3FOEA 3M4OK 5IOSA 5TMCA 5IOQA 3ERED 3GTPA 4A93C 3N0CA 5IOTA 3N3YA 2ZJQS 2ZJRS 2P8TA 2JA6K 3GTOA 1KQ4A 1I50C 4G7HA 2RH6A 1XXBA 1TWGA 1HQMA 1IW7A 1I6HC 2GSOA 2A6HA 2KXYA 2ZUFA 3LPXA 1I50K 2R7ZC 2XCOA 4KATA 3HOWK 1I3QC 1XXAA 1VH2A 1X31C 4KASA 3CQZC 1R9TC 4KMHA 1K83K 3OPFA 1O2BA 1L0WA 5JFEA 2ZUEA 5C44C 4PABA 1PJ6A 1YNJA 2E2JC 1TWCA 1O26A 3BUEA 3SZYA 5HQHA 4WJ3M 3HOWC 3TFJA 3GTMA 2PPBA 5C4JK 4A3JK 3GTGK 3FKIA 4WCES 1EFWA 4KM9A 2V6UA 1F93A 1EQRA 3HKZD 2B63K 2R92K 5C4XC 3HOVK 1DCHA 3RZOK 1GE9A 5M3MK 3PO2C 2NVYK 1J6XA 2NVXC 2PHCB 4BY1K 1UV7A 3I4MC 4GTLA 4LOWA 1WQHA 4GTBA 5E68A 3S16C 5M5WK 4MEYA 2JH3A 3GTPC 3AQPA 3FHZA 2WB1D 1WQGA 4Q5SA 4LK0A 1F7UA 4C3JC 1I3QK 3S2DK 1PJ7A 3GIRA 5M5YK 3PO3C
chains in the Genus database with same CATH topology
4A3EK 3M4OK 4BBSC 4X6AC 3HOXC 2JA6C 5TMCA 4C3HK 3CQZK 3S17C 3GTQK 4A3DK 5C3EK 4MEXA 4A93C 1ZYRA 4LLGA 3S1RK 4LJZA 5IYCC 2Y0SL 4OINA 5IP9C 3EQLA 2JA8C 3K7AK 3S14C 1WCMC 4JK1A 5IYBK 2R93C 2E2IK 3HOXK 4A3MC 2JA6K 2WAQD 4GZYA 1Y1VK 3S2HC 4Y7NK 4A3DC 1I50C 3S1MK 4C3IK 2JA7C 2VUMC 3GTMC 5IP7C 4G7HA 1TWAC 4LK1A 2WB1L 4C2MC 4BBRC 2R92C 3I4NK 2A69A 4A3CC 4AYBL 3FKIC 4KMUA 1HQMA 1IW7A 2PMZL 5IYBC 3DXJA 5TMFA 2NVQC 3S2DC 4BXXC 1I6HC 1WCMK 4OIOA 2A6HA 4BBRK 2JA5C 3S15C 4A3GC 1I50K 3S2HK 2R7ZC 2E2HK 2NVQK 5D4DA 3GTOK 5M3FK 3HOWK 1I3QC 2NVXK 3GTQC 1K83C 4YFNA 3CQZC 5C4XK 4A3FC 1R9TC 3H0GK 1SFOC 3GTKK 4MQ9A 3GTLC 1K83K 3HOUK 5IP9K 3HOZC 3H0GC 1TWGK 1R9TK 3S17K 4C3HC 1XPPA 5C3EC 3HOUC 4OIQA 1BDFA 2YU9K 5C44C 3PO2K 1YNNA 4C3IC 2O5IA 3HKZL 4A3FK 2YU9C 4QIWL 2NVTK 4C3JK 1Y1WK 3WODA 4C2MK 3S1QC 2A68A 3M3YC 2PA8L 4G7OA 1YNJA 2E2JC 1TWFC 3GTJC 3S1MC 4Y52K 4KN4A 3RZDK 5IP7K 1I6HK 4A3LC 3H3VD 3S16K 4A3BK 4A3CK 5IYDC 4XLNA 3HOWC 4A3LK 4OIPA 4Y52C 4QIWD 3GTPK 5FJ8K 3GTJK 2PPBA 3GTKC 5C4JK 4A3JK 3GTGK 1TWGC 4NOIA 3HOZK 4YG2A 4BY7C 3HOYC 5FLMC 4XLPA 4A3IK 1SFOK 3GTMK 4BBSK 4YFKA 3H3VL 3HKZD 4BY7K 4BY1C 4XSZA 3RZOC 3I4NC 2O5JA 4QJVB 2B63K 2R92K 4OIRA 4A93K 3GTOC 5C4XC 3S1NC 3FKIK 2A6EA 4A3JC 4QJVA 3HOVK 3RZOK 3M4OC 2JA8K 2JA5K 3S15K 5M3MK 1TWFK 2E2JK 3PO2C 1TWCK 3HOVC 4A3IC 2NVYK 5FLMK 2E2IC 5IYCK 2R93K 1Y1WC 2NVXC 4YFXA 2NVTC 4BY1K 4A3BC 2PMZD 4KN7A 4AYBD 3I4MC 1TWHK 3S14K 2JA7K 3K7AC 2VUMK 3RZDC 2PA8D 4Q4ZA 3GTLK 4G7ZA 1Y1VC 2CW0A 4Y7NC 4A3KK 4A3MK 3S16C 3I4MK 3PO3K 4XSXA 2BE5A 2NVYC 5C4JC 3GTGC 1TWCC 5M5WK 5IYDK 2WAQL 4MEYA 4A3EC 4A3GK 1TWAK 1I6VA 3PO3C 3GTPC 2E2HC 2R7ZK 5C44K 1TWHC 3HOYK 2WB1D 3S1RC 4ZH4A 4LK0A 4Q5SA 4C3JC 1I3QK 3S2DK 2Y0SD 4BXXK 3M3YK 5M5YK 3S1QK 5M5XK 4A3KC 2B63C 4X6AK 1SMYA 3S1NK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A3E K;  3M4O K;  4BBS C;  4X6A C;  3HOX C;  2JA6 C;  5TMC A;  4C3H K;  3CQZ K;  3S17 C;  3GTQ K;  4A3D K;  5C3E K;  4MEX A;  4A93 C;  1ZYR A;  4LLG A;  3S1R K;  4LJZ A;  5IYC C;  2Y0S L;  4OIN A;  5IP9 C;  3EQL A;  2JA8 C;  3K7A K;  3S14 C;  1WCM C;  4JK1 A;  5IYB K;  2R93 C;  2E2I K;  3HOX K;  4A3M C;  2JA6 K;  2WAQ D;  4GZY A;  1Y1V K;  3S2H C;  4Y7N K;  4A3D C;  1I50 C;  3S1M K;  4C3I K;  2JA7 C;  2VUM C;  3GTM C;  5IP7 C;  4G7H A;  1TWA C;  4LK1 A;  2WB1 L;  4C2M C;  4BBR C;  2R92 C;  3I4N K;  2A69 A;  4A3C C;  4AYB L;  3FKI C;  4KMU A;  1HQM A;  1IW7 A;  2PMZ L;  5IYB C;  3DXJ A;  5TMF A;  2NVQ C;  3S2D C;  4BXX C;  1I6H C;  1WCM K;  4OIO A;  2A6H A;  4BBR K;  2JA5 C;  3S15 C;  4A3G C;  1I50 K;  3S2H K;  2R7Z C;  2E2H K;  2NVQ K;  5D4D A;  3GTO K;  5M3F K;  3HOW K;  1I3Q C;  2NVX K;  3GTQ C;  1K83 C;  4YFN A;  3CQZ C;  5C4X K;  4A3F C;  1R9T C;  3H0G K;  1SFO C;  3GTK K;  4MQ9 A;  3GTL C;  1K83 K;  3HOU K;  5IP9 K;  3HOZ C;  3H0G C;  1TWG K;  1R9T K;  3S17 K;  4C3H C;  1XPP A;  5C3E C;  3HOU C;  4OIQ A;  1BDF A;  2YU9 K;  5C44 C;  3PO2 K;  1YNN A;  4C3I C;  2O5I A;  3HKZ L;  4A3F K;  2YU9 C;  4QIW L;  2NVT K;  4C3J K;  1Y1W K;  3WOD A;  4C2M K;  3S1Q C;  2A68 A;  3M3Y C;  2PA8 L;  4G7O A;  1YNJ A;  2E2J C;  1TWF C;  3GTJ C;  3S1M C;  4Y52 K;  4KN4 A;  3RZD K;  5IP7 K;  1I6H K;  4A3L C;  3H3V D;  3S16 K;  4A3B K;  4A3C K;  5IYD C;  4XLN A;  3HOW C;  4A3L K;  4OIP A;  4Y52 C;  4QIW D;  3GTP K;  5FJ8 K;  3GTJ K;  2PPB A;  3GTK C;  5C4J K;  4A3J K;  3GTG K;  1TWG C;  4NOI A;  3HOZ K;  4YG2 A;  4BY7 C;  3HOY C;  5FLM C;  4XLP A;  4A3I K;  1SFO K;  3GTM K;  4BBS K;  4YFK A;  3H3V L;  3HKZ D;  4BY7 K;  4BY1 C;  4XSZ A;  3RZO C;  3I4N C;  2O5J A;  4QJV B;  2B63 K;  2R92 K;  4OIR A;  4A93 K;  3GTO C;  5C4X C;  3S1N C;  3FKI K;  2A6E A;  4A3J C;  4QJV A;  3HOV K;  3RZO K;  3M4O C;  2JA8 K;  2JA5 K;  3S15 K;  5M3M K;  1TWF K;  2E2J K;  3PO2 C;  1TWC K;  3HOV C;  4A3I C;  2NVY K;  5FLM K;  2E2I C;  5IYC K;  2R93 K;  1Y1W C;  2NVX C;  4YFX A;  2NVT C;  4BY1 K;  4A3B C;  2PMZ D;  4KN7 A;  4AYB D;  3I4M C;  1TWH K;  3S14 K;  2JA7 K;  3K7A C;  2VUM K;  3RZD C;  2PA8 D;  4Q4Z A;  3GTL K;  4G7Z A;  1Y1V C;  2CW0 A;  4Y7N C;  4A3K K;  4A3M K;  3S16 C;  3I4M K;  3PO3 K;  4XSX A;  2BE5 A;  2NVY C;  5C4J C;  3GTG C;  1TWC C;  5M5W K;  5IYD K;  2WAQ L;  4MEY A;  4A3E C;  4A3G K;  1TWA K;  1I6V A;  3PO3 C;  3GTP C;  2E2H C;  2R7Z K;  5C44 K;  1TWH C;  3HOY K;  2WB1 D;  3S1R C;  4ZH4 A;  4LK0 A;  4Q5S A;  4C3J C;  1I3Q K;  3S2D K;  2Y0S D;  4BXX K;  3M3Y K;  5M5Y K;  3S1Q K;  5M5X K;  4A3K C;  2B63 C;  4X6A K;  1SMY A;  3S1N K; 
#chains in the Genus database with same CATH topology
 1PJ5 A;  4WF9 S;  4X6A C;  4C3H K;  4KM8 A;  4BLA A;  4A3D K;  4MEX A;  2V6S A;  5IYC C;  4OIN A;  1O25 A;  1WCM C;  1G51 A;  5IYB K;  1Y1V K;  3S1M K;  4IOA S;  3AD9 C;  3CQZ A;  4LK1 A;  2WB1 L;  4C2M C;  2A69 A;  2R7Z A;  3TFH A;  4AYB L;  4KMU A;  3DLL S;  1DD5 A;  2KWA A;  1O28 A;  4BXX C;  2NVQ C;  1XZQ B;  4BBR K;  4KAR A;  2XCQ A;  5TJ3 A;  2V6T A;  4RMF A;  5M3F K;  3ORE A;  2CFA B;  3GTQ C;  1BJT A;  4KB4 A;  1JQW A;  5IP9 K;  1R9T K;  4FZB A;  2KQ1 A;  1VJE A;  2O5I A;  2NVT K;  4GT9 A;  1Y1W K;  4C2M K;  3GTG A;  2A68 A;  3NUH A;  4LR2 A;  1I6H K;  4A3B K;  5IYD C;  2L3U A;  1F7V A;  1EI6 A;  4A3L K;  1O2A A;  4QIW D;  3GTJ K;  4WJ4 A;  3GTK C;  2RGR A;  1TWG C;  2Y3P A;  4YG2 A;  4BY7 C;  2D6F C;  5FLM C;  4A3I K;  1JVI A;  1EK8 A;  5HL7 S;  4YFK A;  1K83 A;  1RU0 A;  3IPJ A;  3RZO C;  4A93 K;  1WOP A;  3G4A A;  4OIR A;  3Q3Q A;  3GTO C;  4P9S A;  1YX2 A;  3FKI K;  3M4O C;  3S15 K;  3CF5 S;  4J3N A;  4A3I C;  5FLM K;  1J98 A;  4YFX A;  3QX3 A;  1IQ0 A;  4A3B C;  2P5M A;  1ISE A;  2JA7 K;  3K7A C;  3RZD C;  5JVG S;  4G7Z A;  2CW0 A;  1F9N A;  4A3K K;  3I4M K;  1DCO A;  3BP3 A;  1VGX A;  4IOC S;  5IYD K;  2WAQ L;  1I6V A;  2E2H C;  1TWH C;  3S1R C;  4ZH4 A;  2Y0S D;  3GSI A;  3SZZ A;  2O5J A;  2B63 C;  4WFB S;  5DM7 S;  2ZJP S;  1ZQ1 C;  2JA6 C;  5EGH A;  5CHP A;  1IS1 A;  4KDD A;  1ZYR A;  4LJZ A;  1INN A;  5JVO A;  5IP9 C;  3EQL A;  2JA8 C;  1O29 A;  1TWF A;  4KMA A;  3K7A K;  3S14 C;  5IOR A;  1SFO A;  4GZY A;  4Y7N K;  3S2H C;  2VUM C;  3GTM C;  1Y1W A;  5IP7 C;  2EBB A;  1TWA C;  1ZXO A;  4BBR C;  2R92 C;  1EH1 A;  3I4N K;  4P5A A;  3S1N K;  3N0B A;  3GTO K;  3DXJ A;  1AB4 A;  1DCP A;  1WQF A;  4OIO A;  2JA5 C;  4A3G C;  1R9T A;  2E2H K;  2NVQ K;  2VUM A;  2YU9 A;  4A3F C;  2W7V A;  1SFO C;  3GTK K;  4MQ9 A;  2FQT A;  3T00 A;  3HOU K;  3H0G C;  3S17 K;  5EGE A;  3A8I A;  4GTA A;  3HXA A;  3PO2 K;  1YNN A;  2YU9 C;  1FEU A;  1XZP B;  3WOD A;  3AQO A;  3M3Y C;  4G7O A;  3GTK A;  3V4G A;  2NVY A;  1TWF C;  3S1M C;  3RZD K;  1VLO A;  3GTL A;  3A8J A;  2GSN A;  4A3L C;  3H3V D;  1TWH A;  4A3C K;  2E2H A;  4XLN A;  2R92 A;  3T02 A;  4GTF A;  1J6V A;  2E2I A;  2B63 A;  3AH5 A;  1V5V A;  1VRQ C;  4NOI A;  3HOZ K;  4WFA S;  4WIL A;  4XLP A;  1I3Q A;  4M1X A;  1SFO K;  3GTM K;  3H3V L;  4BY7 K;  4BY1 C;  3MML B;  2GAG C;  3S1N C;  2A6E A;  4A3J C;  1I50 A;  4G0U A;  3LAJ A;  3CAG A;  2JA5 K;  1TWF K;  5DM6 S;  1TWC K;  3GEH A;  2E2I C;  2R93 K;  1Y1W C;  3LAP A;  1TWA A;  1XZQ A;  4KN7 A;  3S14 K;  1BS2 A;  2VUM K;  2PA8 D;  1XXC A;  2JA6 A;  4Y52 K;  4Y7N C;  3GEE A;  4A3M K;  4XSX A;  2CFA A;  2NVY C;  5C4J C;  3GTG C;  1WOS A;  2GAH C;  3TFI A;  2XCR B;  3GTJ A;  4A3E C;  1TWA K;  5C44 K;  1USM A;  3L4K A;  3T01 A;  4G0W A;  1ZBS A;  4BXX K;  5CJ9 A;  5M5X K;  4A3K C;  4LQY A;  4GFQ A;  1ZVU A;  4A3E K;  4BBS C;  3S0X A;  3HOX C;  1O27 A;  4KMD A;  1XZP A;  3CQZ K;  3S17 C;  3GTQ K;  3AD8 C;  5C3E K;  4LLG A;  3S1R K;  2Y0S L;  4O2D A;  4PAA A;  4JK1 A;  1WSV A;  2R93 C;  2E2I K;  1IE0 A;  3HOX K;  4A3M C;  2WAQ D;  4ILD A;  4A3D C;  4C3I K;  2JA7 C;  3A8K A;  3PIP S;  4GTE A;  4A3C C;  3FKI C;  2PMZ L;  4P5B A;  3GEI A;  5C4X K;  1WCM K;  5IYB C;  5TMF A;  3S2D C;  3S15 C;  4C45 A;  3JST A;  2R93 A;  1J6W A;  3S2H K;  1B4B A;  5D4D A;  1O24 A;  2JA7 A;  3VA7 A;  2NVX K;  1K83 C;  4YFN A;  3H0G K;  4GTD A;  3GTL C;  3G4C A;  3HOZ C;  1TWG K;  4C3H C;  1XPP A;  5C3E C;  4KAW X;  3HOU C;  4OIQ A;  1BDF A;  2YU9 K;  4C3I C;  1BGW A;  3HKZ L;  4A3F K;  5JVH S;  4QIW L;  1C0A A;  4C3J K;  3S1Q C;  2PA8 L;  1WSR A;  3PIO S;  3GTJ C;  1YCL A;  4KN4 A;  3GDZ A;  5IP7 K;  4G0V A;  3S16 K;  1HI9 A;  4IO9 S;  4OIP A;  3FOF A;  4Y52 C;  3GTP K;  5FJ8 K;  1O2F B;  2JA5 A;  2GSU A;  4AH6 A;  1IL2 A;  3HOY C;  4WFN S;  1WIH A;  4BBS K;  3TTG A;  2FQO A;  4QJV B;  4XSZ A;  3I4N C;  4GTC A;  3L4J A;  1WOR A;  1JOE A;  1WOO A;  4QJV A;  2ZFZ A;  2L5N A;  3ADA C;  3OEP A;  2JA8 K;  5HL8 A;  3AD7 C;  1WCM A;  2E2J K;  3HOV C;  3BP8 C;  5L46 A;  4KB2 A;  5IYC K;  4BKW A;  2NVT C;  4BLB A;  2PMZ D;  4DDQ A;  4AYB D;  1TWH K;  4Q4Z A;  2KPU A;  3GTL K;  1Y1V C;  3PO3 K;  1B4A A;  2BE5 A;  1TWC C;  4KC6 A;  4A3G K;  2R7Z K;  3HOY K;  4XCH A;  3GTQ A;  3LYW A;  2NVX A;  3M3Y K;  1USO A;  3S1Q K;  4X6A K;  3H0G A;  1Y1V A;  1SMY A;  4U67 S;  1IBA A;  4FM9 A;  3FOE A;  3M4O K;  5IOS A;  5TMC A;  5IOQ A;  3ERE D;  3GTP A;  4A93 C;  3N0C A;  5IOT A;  3N3Y A;  2ZJQ S;  2ZJR S;  2P8T A;  2JA6 K;  3GTO A;  1KQ4 A;  1I50 C;  4G7H A;  2RH6 A;  1XXB A;  1TWG A;  1HQM A;  1IW7 A;  1I6H C;  2GSO A;  2A6H A;  2KXY A;  2ZUF A;  3LPX A;  1I50 K;  2R7Z C;  2XCO A;  4KAT A;  3HOW K;  1I3Q C;  1XXA A;  1VH2 A;  1X31 C;  4KAS A;  3CQZ C;  1R9T C;  4KMH A;  1K83 K;  3OPF A;  1O2B A;  1L0W A;  5JFE A;  2ZUE A;  5C44 C;  4PAB A;  1PJ6 A;  1YNJ A;  2E2J C;  1TWC A;  1O26 A;  3BUE A;  3SZY A;  5HQH A;  4WJ3 M;  3HOW C;  3TFJ A;  3GTM A;  2PPB A;  5C4J K;  4A3J K;  3GTG K;  3FKI A;  4WCE S;  1EFW A;  4KM9 A;  2V6U A;  1F93 A;  1EQR A;  3HKZ D;  2B63 K;  2R92 K;  5C4X C;  3HOV K;  1DCH A;  3RZO K;  1GE9 A;  5M3M K;  3PO2 C;  2NVY K;  1J6X A;  2NVX C;  2PHC B;  4BY1 K;  1UV7 A;  3I4M C;  4GTL A;  4LOW A;  1WQH A;  4GTB A;  5E68 A;  3S16 C;  5M5W K;  4MEY A;  2JH3 A;  3GTP C;  3AQP A;  3FHZ A;  2WB1 D;  1WQG A;  4Q5S A;  4LK0 A;  1F7U A;  4C3J C;  1I3Q K;  3S2D K;  1PJ7 A;  3GIR A;  5M5Y K;  3PO3 C; 
#chains in the Genus database with same CATH homology
 4A3E K;  3M4O K;  4BBS C;  4X6A C;  3HOX C;  2JA6 C;  5TMC A;  4C3H K;  3CQZ K;  3S17 C;  3GTQ K;  4A3D K;  5C3E K;  4MEX A;  4A93 C;  1ZYR A;  4LLG A;  3S1R K;  4LJZ A;  5IYC C;  2Y0S L;  4OIN A;  5IP9 C;  3EQL A;  2JA8 C;  3K7A K;  3S14 C;  1WCM C;  4JK1 A;  5IYB K;  2R93 C;  2E2I K;  3HOX K;  4A3M C;  2JA6 K;  2WAQ D;  4GZY A;  1Y1V K;  3S2H C;  4Y7N K;  4A3D C;  1I50 C;  3S1M K;  4C3I K;  2JA7 C;  2VUM C;  3GTM C;  5IP7 C;  4G7H A;  1TWA C;  4LK1 A;  2WB1 L;  4C2M C;  4BBR C;  2R92 C;  3I4N K;  2A69 A;  4A3C C;  4AYB L;  3FKI C;  4KMU A;  1HQM A;  1IW7 A;  2PMZ L;  5IYB C;  3DXJ A;  5TMF A;  2NVQ C;  3S2D C;  4BXX C;  1I6H C;  1WCM K;  4OIO A;  2A6H A;  4BBR K;  2JA5 C;  3S15 C;  4A3G C;  1I50 K;  3S2H K;  2R7Z C;  2E2H K;  2NVQ K;  5D4D A;  3GTO K;  5M3F K;  3HOW K;  1I3Q C;  2NVX K;  3GTQ C;  1K83 C;  4YFN A;  3CQZ C;  5C4X K;  4A3F C;  1R9T C;  3H0G K;  1SFO C;  3GTK K;  4MQ9 A;  3GTL C;  1K83 K;  3HOU K;  5IP9 K;  3HOZ C;  3H0G C;  1TWG K;  1R9T K;  3S17 K;  4C3H C;  1XPP A;  5C3E C;  3HOU C;  4OIQ A;  1BDF A;  2YU9 K;  5C44 C;  3PO2 K;  1YNN A;  4C3I C;  2O5I A;  3HKZ L;  4A3F K;  2YU9 C;  4QIW L;  2NVT K;  4C3J K;  1Y1W K;  3WOD A;  4C2M K;  3S1Q C;  2A68 A;  3M3Y C;  2PA8 L;  4G7O A;  1YNJ A;  2E2J C;  1TWF C;  3GTJ C;  3S1M C;  4Y52 K;  4KN4 A;  3RZD K;  5IP7 K;  1I6H K;  4A3L C;  3H3V D;  3S16 K;  4A3B K;  4A3C K;  5IYD C;  4XLN A;  3HOW C;  4A3L K;  4OIP A;  4Y52 C;  4QIW D;  3GTP K;  5FJ8 K;  3GTJ K;  2PPB A;  3GTK C;  5C4J K;  4A3J K;  3GTG K;  1TWG C;  4NOI A;  3HOZ K;  4YG2 A;  4BY7 C;  3HOY C;  5FLM C;  4XLP A;  4A3I K;  1SFO K;  3GTM K;  4BBS K;  4YFK A;  3H3V L;  3HKZ D;  4BY7 K;  4BY1 C;  4XSZ A;  3RZO C;  3I4N C;  2O5J A;  4QJV B;  2B63 K;  2R92 K;  4OIR A;  4A93 K;  3GTO C;  5C4X C;  3S1N C;  3FKI K;  2A6E A;  4A3J C;  4QJV A;  3HOV K;  3RZO K;  3M4O C;  2JA8 K;  2JA5 K;  3S15 K;  5M3M K;  1TWF K;  2E2J K;  3PO2 C;  1TWC K;  3HOV C;  4A3I C;  2NVY K;  5FLM K;  2E2I C;  5IYC K;  2R93 K;  1Y1W C;  2NVX C;  4YFX A;  2NVT C;  4BY1 K;  4A3B C;  2PMZ D;  4KN7 A;  4AYB D;  3I4M C;  1TWH K;  3S14 K;  2JA7 K;  3K7A C;  2VUM K;  3RZD C;  2PA8 D;  4Q4Z A;  3GTL K;  4G7Z A;  1Y1V C;  2CW0 A;  4Y7N C;  4A3K K;  4A3M K;  3S16 C;  3I4M K;  3PO3 K;  4XSX A;  2BE5 A;  2NVY C;  5C4J C;  3GTG C;  1TWC C;  5M5W K;  5IYD K;  2WAQ L;  4MEY A;  4A3E C;  4A3G K;  1TWA K;  1I6V A;  3PO3 C;  3GTP C;  2E2H C;  2R7Z K;  5C44 K;  1TWH C;  3HOY K;  2WB1 D;  3S1R C;  4ZH4 A;  4LK0 A;  4Q5S A;  4C3J C;  1I3Q K;  3S2D K;  2Y0S D;  4BXX K;  3M3Y K;  5M5Y K;  3S1Q K;  5M5X K;  4A3K C;  2B63 C;  4X6A K;  1SMY A;  3S1N K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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