3S1MC

Rna polymerase ii initiation complex with a 5-nt rna (variant 1)
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1mC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1mC01
4XSZA 3PO3C 3S17C 4G7OA 5C3EK 3GTJC 3HOYK 3HOXC 3M3YC 4AYBD 4OIQA 3PO2C 4BY7K 1HQMA 2JA7C 3GTOK 1WCMK 4BBSC 4QJVA 3GTMC 1TWAK 4MEYA 2JA8C 5IYCC 2JA6C 3HKZD 4KN7A 4C3HC 4OIPA 5D4DA 5FLMC 3GTGC 5M3FK 4Y52C 2B63K 2O5JA 3DXJA 4LK0A 3S1QC 1TWGC 1SMYA 3H0GK 5TMFA 2PMZD 1TWFC 2VUMK 4KN4A 3M4OK 3GTQC 1YNNA 2NVYC 3RZOC 4BY1K 3H3VL 4LLGA 5IP7C 3HKZL 2CW0A 5M5XK 4A3LC 2PA8L 3S1NK 4A3LK 3GTLC 1ZYRA 4JK1A 2R92K 4A3KK 1R9TC 5IP9K 3S1RK 5C4XK 3RZOK 4A3DK 3GTQK 5C44C 2Y0SD 4A3MC 4YFKA 1K83K 1IW7A 2E2IK 2E2JK 4YFXA 3S14C 3GTPC 1Y1VK 3S16K 2JA5K 4ZH4A 5C4JC 2B63C 2PPBA 2JA8K 3WODA 2R7ZK 4AYBL 1WCMC 4OIRA 3HOUC 3GTKK 4C2MK 3I4NC 4BY7C 5C4JK 3PO2K 3HOYC 3HOVC 2E2JC 3RZDK 3S2HK 4A3FK 1K83C 4A3CK 3S2HC 4A3CC 2BE5A 4YFNA 5IP9C 3S1RC 1TWHK 5M3MK 4C2MC 4BBRK 1YNJA 1Y1WC 1R9TK 3I4NK 2WB1D 2R7ZC 4LJZA 4A3GC 4A3EK 2NVQK 2WB1L 2JA5C 2WAQD 4BY1C 2NVYK 3S14K 3M4OC 2E2IC 4YG2A 2VUMC 1TWFK 4C3JC 4A3DC 4OINA 5C4XC 4A3EC 4A3KC 2NVQC 3S1MK 4A3GK 5M5YK 3HOZC 4Y7NK 3S1NC 3S15K 4Q4ZA 4BBSK 3GTOC 2JA7K 4OIOA 2A6HA 5TMCA 5C3EC 4G7HA 2NVTK 3S17K 4GZYA 2R93K 4A3FC 3RZDC 2E2HC 4KMUA 1TWGK 3HOVK 5FJ8K 4C3IK 4NOIA 1I50C 3CQZC 4QIWL 3GTGK 4C3HK 3GTKC 2JA6K 3HOUK 1I6VA 3FKIC 5IYBC 4BXXC 3I4MK 4A3BC 4Q5SA 5IYBK 4A3BK 4MQ9A 1I50K 3CQZK 3S16C 3HOXK 3M3YK 3GTPK 1Y1VC 2A68A 2A69A 3PO3K 3S2DK 2YU9C 2R93C 4A93K 4A3MK 3K7AC 2NVTC 1I3QC 5C44K 2NVXC 4MEXA 4LK1A 1XPPA 2Y0SL 1BDFA 2R92C 5IYDC 2O5IA 4X6AC 3GTLK 1I6HC 1TWCK 4A3JC 4Y7NC 3S15C 3HOZK 4QIWD 5IP7K 5M5WK 3S1MC 4QJVB 1SFOK 4X6AK 5IYDK 2PA8D 4C3JK 3HOWC 4A3IK 1I3QK 4XLPA 4A93C 2WAQL 3H0GC 3S2DC 4A3IC 3S1QK 4XLNA 2A6EA 3HOWK 4Y52K 2PMZL 4G7ZA 5FLMK 1SFOC 4XSXA 5IYCK 4A3JK 1TWAC 3I4MC 3FKIK 3GTMK 1TWCC 4BXXK 1I6HK 1Y1WK 3H3VD 4BBRC 1TWHC 4C3IC 3GTJK 2NVXK 2E2HK 3K7AK 3EQLA 2YU9K
chains in the Genus database with same CATH superfamily
3AD9C 3HOXC 2V6UA 4OIQA 1JQWA 1WCMK 4MEYA 5IYCC 3A8JA 4KN7A 5FLMC 3GTGC 5M3FK 5IOQA 2O5JA 3GIRA 3DXJA 3S1QC 3BUEA 5IOSA 5IOTA 3GSIA 1IS1A 3GTQC 5L46A 1WQGA 4BY1K 2JA5A 3H3VL 4WCES 3HKZL 4A3LC 2PA8L 1X31C 1Y1WA 1O29A 3BP8C 1R9TC 3S1RK 5C4XK 4A3DK 4G0WA 2XCQA 1K83K 2ZJQS 1FEUA 2E2IK 1Y1VK 1O25A 3GEHA 4M1XA 3PIOS 1J6WA 4WFNS 3PO2K 3QX3A 3RZDK 4A3CK 3S2HC 1WOPA 2YU9A 4YFNA 5IP9C 1B4AA 5M3MK 4BBRK 1YNJA 3ERED 1WCMA 2GAGC 1O27A 4C45A 4FM9A 2NVQK 2WB1L 3S14K 4GTAA 3FOFA 2R93A 1TWFK 1ZVUA 4BKWA 4A3KC 1INNA 3S1MK 5JVGS 4BBSK 3GTOC 5TMCA 2NVTK 4WFAS 2R93K 4A3FC 1TWGK 3HOVK 3LAJA 2W7VA 4GTLA 4QIWL 3GTKC 1EQRA 4A3BK 1XZQA 1JVIA 1VRQC 3GDZA 3M3YK 4KATA 2A69A 3PO3K 4A93K 1I3QC 5C44K 2GSUA 3FOEA 2R92C 1VJEA 1WORA 1WOSA 1TWCK 4A3JC 3S15C 1O24A 3TFIA 1EK8A 4QJVB 4X6AK 3N3YA 1O2FB 4C3JK 3HOWC 1I3QK 1K83A 3T01A 4J3NA 1YCLA 2CFAB 4IO9S 1TWAC 3FKIK 3SZZA 3GTMK 2XCRB 4BXXK 1Y1WK 4WFBS 1WOOA 2JH3A 2P8TA 4C3IC 3EQLA 4DDQA 2YU9K 3TFJA 3HOYK 4GTBA 2JA7C 1KQ4A 1F7VA 3SZYA 4OIPA 2NVYA 1USMA 2PMZD 1O2BA 5CHPA 2VUMK 4KN4A 1JOEA 2KWAA 1TWHA 4LLGA 2CW0A 3GTMA 1C0AA 4KDDA 4JK1A 2ZUFA 4GT9A 4YFKA 2E2JK 1WQHA 1PJ5A 2JA5K 2B63C 4GTFA 1IE0A 5CJ9A 1DCPA 5E68A 3TFHA 3HOUC 1SFOA 4C2MK 3I4NC 4BY7C 3HOVC 2E2JC 4A3FK 1K83C 1WIHA 4P5BA 3I4NK 4C2MC 2KPUA 4WF9S 2R7ZC 4LJZA 3FKIA 4A3GC 2JA5C 4BY1C 3FHZA 1I3QA 2ZJPS 1PJ7A 2VUMC 3LAPA 3L4JA 4C3JC 1R9TA 4OINA 3L4KA 4A3GK 3S15K 2L3UA 2JA7K 1WSVA 4LQYA 3OREA 4AH6A 4G7HA 1TWFA 4KMUA 4KMHA 4C3IK 1BS2A 3LYWA 2JA6A 3HOUK 2JA6K 3FKIC 4BXXC 4A3BC 2KXYA 2P5MA 1VLOA 5IORA 4MQ9A 5HQHA 1Y1VC 2A68A 4FZBA 2YU9C 2R93C 2NVTC 1DCHA 4MEXA 4LK1A 1XPPA 3ADAC 1BDFA 4X6AC 3A8IA 3S1MC 2XCOA 4O2DA 2PA8D 3DLLS 3V4GA 2B63A 1F93A 4A3IK 4A93C 1VGXA 1L0WA 4A3IC 3S1QK 4XLNA 4KAWX 3HOWK 1IQ0A 3AQOA 1XXAA 4LOWA 4A3JK 1TWCC 3GTPA 3GTQA 3AQPA 3M3YC 1G51A 4AYBD 4BY7K 1GE9A 3GTOK 1XZPB 4BBSC 4QJVA 3GTMC 1RU0A 1TWAK 3OEPA 2JA6C 3HKZD 5D4DA 2V6TA 3CQZA 3N0CA 1I50A 4Y52C 2B63K 1TWGC 1SMYA 3H0GK 1TWFC 3AD7C 1YNNA 2Y3PA 1ZQ1C 1TWCA 1TWAA 2R92K 4IOCS 5IP9K 3GTQK 5C44C 1IW7A 2FQOA 1IBAA 4YFXA 3S14C 3GTPC 2EBBA 2RH6A 4ZH4A 2PPBA 4WILA 3VA7A 3WODA 2R7ZK 1EH1A 1WCMC 1UV7A 4OIRA 3GTKK 3T00A 3HOYC 3H0GA 4BLAA 3S1RC 1R9TK 1Y1WC 2WB1D 5HL8A 2GAHC 1F9NA 2NVYK 5EGHA 3M4OC 2E2IC 4YG2A 1XXCA 2ZUEA 2NVQC 1EI6A 4KM9A 5M5YK 4Y7NK 3PIPS 3GTKA 1WSRA 3A8KA 2ZJRS 1V5VA 2A6HA 3G4AA 5EGEA 5C3EC 3S17K 1J98A 3RZDC 2E2HC 5FJ8K 3MMLB 1AB4A 4NOIA 2FQTA 4KB4A 4KC6A 3GEIA 1PJ6A 1I6VA 3I4MK 3CF5S 5IYBK 1YX2A 4ILDA 3JSTA 3LPXA 3S16C 3HOXK 3GEEA 3GTJA 3HXAA 1IL2A 2L5NA 4KMDA 1VH2A 3OPFA 2Y0SL 4KMAA 5JFEA 5IYDC 3GTLK 1I6HC 3HOZK 5IP7K 1F7UA 4GTEA 2WAQL 3S2DC 5JVOA 1HI9A 4G7ZA 5FLMK 2KQ1A 1BGWA 5IYCK 3AH5A 2R92A 3H3VD 4BBRC 3N0BA 4BLBA 3BP3A 4XSZA 3PO3C 3S17C 4G7OA 5C3EK 3GTJC 4GTDA 3PO2C 4GTCA 1HQMA 3GTGA 2JA8C 1EFWA 4C3HC 4LR2A 4KARA 4LK0A 4G0VA 5TMFA 2VUMA 4U67S 3M4OK 1XZQB 1ZXOA 2NVYC 3RZOC 1O26A 4KASA 4P5AA 3GTOA 5IP7C 5M5XK 3S1NK 4A3LK 2GSOA 3GTLC 1ZYRA 3IPJA 4A3KK 5DM6S 3RZOK 1J6XA 2Y0SD 4A3MC 4PABA 3S16K 5C4JC 2JA8K 4AYBL 1WQFA 1J6VA 5C4JK 3S0XA 4PAAA 2NVXA 2CFAA 3S2HK 2PHCB 4A3CC 2BE5A 4KB2A 1BJTA 1TWHK 3NUHA 3CAGA 4A3EK 3AD8C 2WAQD 2V6SA 1TWGA 4XCHA 4A3DC 5C4XC 4A3EC 4P9SA 3GTLA 1ISEA 4RMFA 3HOZC 3S1NC 4Q4ZA 1DD5A 3T02A 4GFQA 4OIOA 2JA7A 1XZPA 1ZBSA 4GZYA 2D6FC 2RGRA 2E2IA 2GSNA 4WJ3M 5TJ3A 1I50C 3CQZC 3GTGK 4C3HK 5IYBC 2ZFZA 4Q5SA 1O28A 1USOA 1I50K 3CQZK 3GTPK 1XXBA 3S2DK 4KM8A 4A3MK 3K7AC 2NVXC 2O5IA 4IOAS 2R7ZA 1DCOA 4Y7NC 3Q3QA 4QIWD 5M5WK 5IYDK 1SFOK 3TTGA 5DM7S 4XLPA 3H0GC 5JVHS 2A6EA 5HL7S 1Y1VA 4Y52K 2PMZL 1O2AA 1SFOC 4WJ4A 4XSXA 3I4MC 1I6HK 1TWHC 3G4CA 4G0UA 3GTJK 2NVXK 2E2HK 3K7AK 2E2HA 1B4BA
chains in the Genus database with same CATH topology
4XSZA 3PO3C 3S17C 4G7OA 5C3EK 3GTJC 3HOYK 3HOXC 3M3YC 4AYBD 4OIQA 3PO2C 4BY7K 1HQMA 2JA7C 3GTOK 1WCMK 4BBSC 4QJVA 3GTMC 1TWAK 4MEYA 2JA8C 5IYCC 2JA6C 3HKZD 4KN7A 4C3HC 4OIPA 5D4DA 5FLMC 3GTGC 5M3FK 4Y52C 2B63K 2O5JA 3DXJA 4LK0A 3S1QC 1TWGC 1SMYA 3H0GK 5TMFA 2PMZD 1TWFC 2VUMK 4KN4A 3M4OK 3GTQC 1YNNA 2NVYC 3RZOC 4BY1K 3H3VL 4LLGA 5IP7C 3HKZL 2CW0A 5M5XK 4A3LC 2PA8L 3S1NK 4A3LK 3GTLC 1ZYRA 4JK1A 2R92K 4A3KK 1R9TC 5IP9K 3S1RK 5C4XK 3RZOK 4A3DK 3GTQK 5C44C 2Y0SD 4A3MC 4YFKA 1K83K 1IW7A 2E2IK 2E2JK 4YFXA 3S14C 3GTPC 1Y1VK 3S16K 2JA5K 4ZH4A 5C4JC 2B63C 2PPBA 2JA8K 3WODA 2R7ZK 4AYBL 1WCMC 4OIRA 3HOUC 3GTKK 4C2MK 3I4NC 4BY7C 5C4JK 3PO2K 3HOYC 3HOVC 2E2JC 3RZDK 3S2HK 4A3FK 1K83C 4A3CK 3S2HC 4A3CC 2BE5A 4YFNA 5IP9C 3S1RC 1TWHK 5M3MK 4C2MC 4BBRK 1YNJA 1Y1WC 1R9TK 3I4NK 2WB1D 2R7ZC 4LJZA 4A3GC 4A3EK 2NVQK 2WB1L 2JA5C 2WAQD 4BY1C 2NVYK 3S14K 3M4OC 2E2IC 4YG2A 2VUMC 1TWFK 4C3JC 4A3DC 4OINA 5C4XC 4A3EC 4A3KC 2NVQC 3S1MK 4A3GK 5M5YK 3HOZC 4Y7NK 3S1NC 3S15K 4Q4ZA 4BBSK 3GTOC 2JA7K 4OIOA 2A6HA 5TMCA 5C3EC 4G7HA 2NVTK 3S17K 4GZYA 2R93K 4A3FC 3RZDC 2E2HC 4KMUA 1TWGK 3HOVK 5FJ8K 4C3IK 4NOIA 1I50C 3CQZC 4QIWL 3GTGK 4C3HK 3GTKC 2JA6K 3HOUK 1I6VA 3FKIC 5IYBC 4BXXC 3I4MK 4A3BC 4Q5SA 5IYBK 4A3BK 4MQ9A 1I50K 3CQZK 3S16C 3HOXK 3M3YK 3GTPK 1Y1VC 2A68A 2A69A 3PO3K 3S2DK 2YU9C 2R93C 4A93K 4A3MK 3K7AC 2NVTC 1I3QC 5C44K 2NVXC 4MEXA 4LK1A 1XPPA 2Y0SL 1BDFA 2R92C 5IYDC 2O5IA 4X6AC 3GTLK 1I6HC 1TWCK 4A3JC 4Y7NC 3S15C 3HOZK 4QIWD 5IP7K 5M5WK 3S1MC 4QJVB 1SFOK 4X6AK 5IYDK 2PA8D 4C3JK 3HOWC 4A3IK 1I3QK 4XLPA 4A93C 2WAQL 3H0GC 3S2DC 4A3IC 3S1QK 4XLNA 2A6EA 3HOWK 4Y52K 2PMZL 4G7ZA 5FLMK 1SFOC 4XSXA 5IYCK 4A3JK 1TWAC 3I4MC 3FKIK 3GTMK 1TWCC 4BXXK 1I6HK 1Y1WK 3H3VD 4BBRC 1TWHC 4C3IC 3GTJK 2NVXK 2E2HK 3K7AK 3EQLA 2YU9K
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4XSZ A;  3PO3 C;  3S17 C;  4G7O A;  5C3E K;  3GTJ C;  3HOY K;  3HOX C;  3M3Y C;  4AYB D;  4OIQ A;  3PO2 C;  4BY7 K;  1HQM A;  2JA7 C;  3GTO K;  1WCM K;  4BBS C;  4QJV A;  3GTM C;  1TWA K;  4MEY A;  2JA8 C;  5IYC C;  2JA6 C;  3HKZ D;  4KN7 A;  4C3H C;  4OIP A;  5D4D A;  5FLM C;  3GTG C;  5M3F K;  4Y52 C;  2B63 K;  2O5J A;  3DXJ A;  4LK0 A;  3S1Q C;  1TWG C;  1SMY A;  3H0G K;  5TMF A;  2PMZ D;  1TWF C;  2VUM K;  4KN4 A;  3M4O K;  3GTQ C;  1YNN A;  2NVY C;  3RZO C;  4BY1 K;  3H3V L;  4LLG A;  5IP7 C;  3HKZ L;  2CW0 A;  5M5X K;  4A3L C;  2PA8 L;  3S1N K;  4A3L K;  3GTL C;  1ZYR A;  4JK1 A;  2R92 K;  4A3K K;  1R9T C;  5IP9 K;  3S1R K;  5C4X K;  3RZO K;  4A3D K;  3GTQ K;  5C44 C;  2Y0S D;  4A3M C;  4YFK A;  1K83 K;  1IW7 A;  2E2I K;  2E2J K;  4YFX A;  3S14 C;  3GTP C;  1Y1V K;  3S16 K;  2JA5 K;  4ZH4 A;  5C4J C;  2B63 C;  2PPB A;  2JA8 K;  3WOD A;  2R7Z K;  4AYB L;  1WCM C;  4OIR A;  3HOU C;  3GTK K;  4C2M K;  3I4N C;  4BY7 C;  5C4J K;  3PO2 K;  3HOY C;  3HOV C;  2E2J C;  3RZD K;  3S2H K;  4A3F K;  1K83 C;  4A3C K;  3S2H C;  4A3C C;  2BE5 A;  4YFN A;  5IP9 C;  3S1R C;  1TWH K;  5M3M K;  4C2M C;  4BBR K;  1YNJ A;  1Y1W C;  1R9T K;  3I4N K;  2WB1 D;  2R7Z C;  4LJZ A;  4A3G C;  4A3E K;  2NVQ K;  2WB1 L;  2JA5 C;  2WAQ D;  4BY1 C;  2NVY K;  3S14 K;  3M4O C;  2E2I C;  4YG2 A;  2VUM C;  1TWF K;  4C3J C;  4A3D C;  4OIN A;  5C4X C;  4A3E C;  4A3K C;  2NVQ C;  3S1M K;  4A3G K;  5M5Y K;  3HOZ C;  4Y7N K;  3S1N C;  3S15 K;  4Q4Z A;  4BBS K;  3GTO C;  2JA7 K;  4OIO A;  2A6H A;  5TMC A;  5C3E C;  4G7H A;  2NVT K;  3S17 K;  4GZY A;  2R93 K;  4A3F C;  3RZD C;  2E2H C;  4KMU A;  1TWG K;  3HOV K;  5FJ8 K;  4C3I K;  4NOI A;  1I50 C;  3CQZ C;  4QIW L;  3GTG K;  4C3H K;  3GTK C;  2JA6 K;  3HOU K;  1I6V A;  3FKI C;  5IYB C;  4BXX C;  3I4M K;  4A3B C;  4Q5S A;  5IYB K;  4A3B K;  4MQ9 A;  1I50 K;  3CQZ K;  3S16 C;  3HOX K;  3M3Y K;  3GTP K;  1Y1V C;  2A68 A;  2A69 A;  3PO3 K;  3S2D K;  2YU9 C;  2R93 C;  4A93 K;  4A3M K;  3K7A C;  2NVT C;  1I3Q C;  5C44 K;  2NVX C;  4MEX A;  4LK1 A;  1XPP A;  2Y0S L;  1BDF A;  2R92 C;  5IYD C;  2O5I A;  4X6A C;  3GTL K;  1I6H C;  1TWC K;  4A3J C;  4Y7N C;  3S15 C;  3HOZ K;  4QIW D;  5IP7 K;  5M5W K;  3S1M C;  4QJV B;  1SFO K;  4X6A K;  5IYD K;  2PA8 D;  4C3J K;  3HOW C;  4A3I K;  1I3Q K;  4XLP A;  4A93 C;  2WAQ L;  3H0G C;  3S2D C;  4A3I C;  3S1Q K;  4XLN A;  2A6E A;  3HOW K;  4Y52 K;  2PMZ L;  4G7Z A;  5FLM K;  1SFO C;  4XSX A;  5IYC K;  4A3J K;  1TWA C;  3I4M C;  3FKI K;  3GTM K;  1TWC C;  4BXX K;  1I6H K;  1Y1W K;  3H3V D;  4BBR C;  1TWH C;  4C3I C;  3GTJ K;  2NVX K;  2E2H K;  3K7A K;  3EQL A;  2YU9 K; 
#chains in the Genus database with same CATH topology
 3AD9 C;  3HOX C;  2V6U A;  4OIQ A;  1JQW A;  1WCM K;  4MEY A;  5IYC C;  3A8J A;  4KN7 A;  5FLM C;  3GTG C;  5M3F K;  5IOQ A;  2O5J A;  3GIR A;  3DXJ A;  3S1Q C;  3BUE A;  5IOS A;  5IOT A;  3GSI A;  1IS1 A;  3GTQ C;  5L46 A;  1WQG A;  4BY1 K;  2JA5 A;  3H3V L;  4WCE S;  3HKZ L;  4A3L C;  2PA8 L;  1X31 C;  1Y1W A;  1O29 A;  3BP8 C;  1R9T C;  3S1R K;  5C4X K;  4A3D K;  4G0W A;  2XCQ A;  1K83 K;  2ZJQ S;  1FEU A;  2E2I K;  1Y1V K;  1O25 A;  3GEH A;  4M1X A;  3PIO S;  1J6W A;  4WFN S;  3PO2 K;  3QX3 A;  3RZD K;  4A3C K;  3S2H C;  1WOP A;  2YU9 A;  4YFN A;  5IP9 C;  1B4A A;  5M3M K;  4BBR K;  1YNJ A;  3ERE D;  1WCM A;  2GAG C;  1O27 A;  4C45 A;  4FM9 A;  2NVQ K;  2WB1 L;  3S14 K;  4GTA A;  3FOF A;  2R93 A;  1TWF K;  1ZVU A;  4BKW A;  4A3K C;  1INN A;  3S1M K;  5JVG S;  4BBS K;  3GTO C;  5TMC A;  2NVT K;  4WFA S;  2R93 K;  4A3F C;  1TWG K;  3HOV K;  3LAJ A;  2W7V A;  4GTL A;  4QIW L;  3GTK C;  1EQR A;  4A3B K;  1XZQ A;  1JVI A;  1VRQ C;  3GDZ A;  3M3Y K;  4KAT A;  2A69 A;  3PO3 K;  4A93 K;  1I3Q C;  5C44 K;  2GSU A;  3FOE A;  2R92 C;  1VJE A;  1WOR A;  1WOS A;  1TWC K;  4A3J C;  3S15 C;  1O24 A;  3TFI A;  1EK8 A;  4QJV B;  4X6A K;  3N3Y A;  1O2F B;  4C3J K;  3HOW C;  1I3Q K;  1K83 A;  3T01 A;  4J3N A;  1YCL A;  2CFA B;  4IO9 S;  1TWA C;  3FKI K;  3SZZ A;  3GTM K;  2XCR B;  4BXX K;  1Y1W K;  4WFB S;  1WOO A;  2JH3 A;  2P8T A;  4C3I C;  3EQL A;  4DDQ A;  2YU9 K;  3TFJ A;  3HOY K;  4GTB A;  2JA7 C;  1KQ4 A;  1F7V A;  3SZY A;  4OIP A;  2NVY A;  1USM A;  2PMZ D;  1O2B A;  5CHP A;  2VUM K;  4KN4 A;  1JOE A;  2KWA A;  1TWH A;  4LLG A;  2CW0 A;  3GTM A;  1C0A A;  4KDD A;  4JK1 A;  2ZUF A;  4GT9 A;  4YFK A;  2E2J K;  1WQH A;  1PJ5 A;  2JA5 K;  2B63 C;  4GTF A;  1IE0 A;  5CJ9 A;  1DCP A;  5E68 A;  3TFH A;  3HOU C;  1SFO A;  4C2M K;  3I4N C;  4BY7 C;  3HOV C;  2E2J C;  4A3F K;  1K83 C;  1WIH A;  4P5B A;  3I4N K;  4C2M C;  2KPU A;  4WF9 S;  2R7Z C;  4LJZ A;  3FKI A;  4A3G C;  2JA5 C;  4BY1 C;  3FHZ A;  1I3Q A;  2ZJP S;  1PJ7 A;  2VUM C;  3LAP A;  3L4J A;  4C3J C;  1R9T A;  4OIN A;  3L4K A;  4A3G K;  3S15 K;  2L3U A;  2JA7 K;  1WSV A;  4LQY A;  3ORE A;  4AH6 A;  4G7H A;  1TWF A;  4KMU A;  4KMH A;  4C3I K;  1BS2 A;  3LYW A;  2JA6 A;  3HOU K;  2JA6 K;  3FKI C;  4BXX C;  4A3B C;  2KXY A;  2P5M A;  1VLO A;  5IOR A;  4MQ9 A;  5HQH A;  1Y1V C;  2A68 A;  4FZB A;  2YU9 C;  2R93 C;  2NVT C;  1DCH A;  4MEX A;  4LK1 A;  1XPP A;  3ADA C;  1BDF A;  4X6A C;  3A8I A;  3S1M C;  2XCO A;  4O2D A;  2PA8 D;  3DLL S;  3V4G A;  2B63 A;  1F93 A;  4A3I K;  4A93 C;  1VGX A;  1L0W A;  4A3I C;  3S1Q K;  4XLN A;  4KAW X;  3HOW K;  1IQ0 A;  3AQO A;  1XXA A;  4LOW A;  4A3J K;  1TWC C;  3GTP A;  3GTQ A;  3AQP A;  3M3Y C;  1G51 A;  4AYB D;  4BY7 K;  1GE9 A;  3GTO K;  1XZP B;  4BBS C;  4QJV A;  3GTM C;  1RU0 A;  1TWA K;  3OEP A;  2JA6 C;  3HKZ D;  5D4D A;  2V6T A;  3CQZ A;  3N0C A;  1I50 A;  4Y52 C;  2B63 K;  1TWG C;  1SMY A;  3H0G K;  1TWF C;  3AD7 C;  1YNN A;  2Y3P A;  1ZQ1 C;  1TWC A;  1TWA A;  2R92 K;  4IOC S;  5IP9 K;  3GTQ K;  5C44 C;  1IW7 A;  2FQO A;  1IBA A;  4YFX A;  3S14 C;  3GTP C;  2EBB A;  2RH6 A;  4ZH4 A;  2PPB A;  4WIL A;  3VA7 A;  3WOD A;  2R7Z K;  1EH1 A;  1WCM C;  1UV7 A;  4OIR A;  3GTK K;  3T00 A;  3HOY C;  3H0G A;  4BLA A;  3S1R C;  1R9T K;  1Y1W C;  2WB1 D;  5HL8 A;  2GAH C;  1F9N A;  2NVY K;  5EGH A;  3M4O C;  2E2I C;  4YG2 A;  1XXC A;  2ZUE A;  2NVQ C;  1EI6 A;  4KM9 A;  5M5Y K;  4Y7N K;  3PIP S;  3GTK A;  1WSR A;  3A8K A;  2ZJR S;  1V5V A;  2A6H A;  3G4A A;  5EGE A;  5C3E C;  3S17 K;  1J98 A;  3RZD C;  2E2H C;  5FJ8 K;  3MML B;  1AB4 A;  4NOI A;  2FQT A;  4KB4 A;  4KC6 A;  3GEI A;  1PJ6 A;  1I6V A;  3I4M K;  3CF5 S;  5IYB K;  1YX2 A;  4ILD A;  3JST A;  3LPX A;  3S16 C;  3HOX K;  3GEE A;  3GTJ A;  3HXA A;  1IL2 A;  2L5N A;  4KMD A;  1VH2 A;  3OPF A;  2Y0S L;  4KMA A;  5JFE A;  5IYD C;  3GTL K;  1I6H C;  3HOZ K;  5IP7 K;  1F7U A;  4GTE A;  2WAQ L;  3S2D C;  5JVO A;  1HI9 A;  4G7Z A;  5FLM K;  2KQ1 A;  1BGW A;  5IYC K;  3AH5 A;  2R92 A;  3H3V D;  4BBR C;  3N0B A;  4BLB A;  3BP3 A;  4XSZ A;  3PO3 C;  3S17 C;  4G7O A;  5C3E K;  3GTJ C;  4GTD A;  3PO2 C;  4GTC A;  1HQM A;  3GTG A;  2JA8 C;  1EFW A;  4C3H C;  4LR2 A;  4KAR A;  4LK0 A;  4G0V A;  5TMF A;  2VUM A;  4U67 S;  3M4O K;  1XZQ B;  1ZXO A;  2NVY C;  3RZO C;  1O26 A;  4KAS A;  4P5A A;  3GTO A;  5IP7 C;  5M5X K;  3S1N K;  4A3L K;  2GSO A;  3GTL C;  1ZYR A;  3IPJ A;  4A3K K;  5DM6 S;  3RZO K;  1J6X A;  2Y0S D;  4A3M C;  4PAB A;  3S16 K;  5C4J C;  2JA8 K;  4AYB L;  1WQF A;  1J6V A;  5C4J K;  3S0X A;  4PAA A;  2NVX A;  2CFA A;  3S2H K;  2PHC B;  4A3C C;  2BE5 A;  4KB2 A;  1BJT A;  1TWH K;  3NUH A;  3CAG A;  4A3E K;  3AD8 C;  2WAQ D;  2V6S A;  1TWG A;  4XCH A;  4A3D C;  5C4X C;  4A3E C;  4P9S A;  3GTL A;  1ISE A;  4RMF A;  3HOZ C;  3S1N C;  4Q4Z A;  1DD5 A;  3T02 A;  4GFQ A;  4OIO A;  2JA7 A;  1XZP A;  1ZBS A;  4GZY A;  2D6F C;  2RGR A;  2E2I A;  2GSN A;  4WJ3 M;  5TJ3 A;  1I50 C;  3CQZ C;  3GTG K;  4C3H K;  5IYB C;  2ZFZ A;  4Q5S A;  1O28 A;  1USO A;  1I50 K;  3CQZ K;  3GTP K;  1XXB A;  3S2D K;  4KM8 A;  4A3M K;  3K7A C;  2NVX C;  2O5I A;  4IOA S;  2R7Z A;  1DCO A;  4Y7N C;  3Q3Q A;  4QIW D;  5M5W K;  5IYD K;  1SFO K;  3TTG A;  5DM7 S;  4XLP A;  3H0G C;  5JVH S;  2A6E A;  5HL7 S;  1Y1V A;  4Y52 K;  2PMZ L;  1O2A A;  1SFO C;  4WJ4 A;  4XSX A;  3I4M C;  1I6H K;  1TWH C;  3G4C A;  4G0U A;  3GTJ K;  2NVX K;  2E2H K;  3K7A K;  2E2H A;  1B4B A; 
#chains in the Genus database with same CATH homology
 4XSZ A;  3PO3 C;  3S17 C;  4G7O A;  5C3E K;  3GTJ C;  3HOY K;  3HOX C;  3M3Y C;  4AYB D;  4OIQ A;  3PO2 C;  4BY7 K;  1HQM A;  2JA7 C;  3GTO K;  1WCM K;  4BBS C;  4QJV A;  3GTM C;  1TWA K;  4MEY A;  2JA8 C;  5IYC C;  2JA6 C;  3HKZ D;  4KN7 A;  4C3H C;  4OIP A;  5D4D A;  5FLM C;  3GTG C;  5M3F K;  4Y52 C;  2B63 K;  2O5J A;  3DXJ A;  4LK0 A;  3S1Q C;  1TWG C;  1SMY A;  3H0G K;  5TMF A;  2PMZ D;  1TWF C;  2VUM K;  4KN4 A;  3M4O K;  3GTQ C;  1YNN A;  2NVY C;  3RZO C;  4BY1 K;  3H3V L;  4LLG A;  5IP7 C;  3HKZ L;  2CW0 A;  5M5X K;  4A3L C;  2PA8 L;  3S1N K;  4A3L K;  3GTL C;  1ZYR A;  4JK1 A;  2R92 K;  4A3K K;  1R9T C;  5IP9 K;  3S1R K;  5C4X K;  3RZO K;  4A3D K;  3GTQ K;  5C44 C;  2Y0S D;  4A3M C;  4YFK A;  1K83 K;  1IW7 A;  2E2I K;  2E2J K;  4YFX A;  3S14 C;  3GTP C;  1Y1V K;  3S16 K;  2JA5 K;  4ZH4 A;  5C4J C;  2B63 C;  2PPB A;  2JA8 K;  3WOD A;  2R7Z K;  4AYB L;  1WCM C;  4OIR A;  3HOU C;  3GTK K;  4C2M K;  3I4N C;  4BY7 C;  5C4J K;  3PO2 K;  3HOY C;  3HOV C;  2E2J C;  3RZD K;  3S2H K;  4A3F K;  1K83 C;  4A3C K;  3S2H C;  4A3C C;  2BE5 A;  4YFN A;  5IP9 C;  3S1R C;  1TWH K;  5M3M K;  4C2M C;  4BBR K;  1YNJ A;  1Y1W C;  1R9T K;  3I4N K;  2WB1 D;  2R7Z C;  4LJZ A;  4A3G C;  4A3E K;  2NVQ K;  2WB1 L;  2JA5 C;  2WAQ D;  4BY1 C;  2NVY K;  3S14 K;  3M4O C;  2E2I C;  4YG2 A;  2VUM C;  1TWF K;  4C3J C;  4A3D C;  4OIN A;  5C4X C;  4A3E C;  4A3K C;  2NVQ C;  3S1M K;  4A3G K;  5M5Y K;  3HOZ C;  4Y7N K;  3S1N C;  3S15 K;  4Q4Z A;  4BBS K;  3GTO C;  2JA7 K;  4OIO A;  2A6H A;  5TMC A;  5C3E C;  4G7H A;  2NVT K;  3S17 K;  4GZY A;  2R93 K;  4A3F C;  3RZD C;  2E2H C;  4KMU A;  1TWG K;  3HOV K;  5FJ8 K;  4C3I K;  4NOI A;  1I50 C;  3CQZ C;  4QIW L;  3GTG K;  4C3H K;  3GTK C;  2JA6 K;  3HOU K;  1I6V A;  3FKI C;  5IYB C;  4BXX C;  3I4M K;  4A3B C;  4Q5S A;  5IYB K;  4A3B K;  4MQ9 A;  1I50 K;  3CQZ K;  3S16 C;  3HOX K;  3M3Y K;  3GTP K;  1Y1V C;  2A68 A;  2A69 A;  3PO3 K;  3S2D K;  2YU9 C;  2R93 C;  4A93 K;  4A3M K;  3K7A C;  2NVT C;  1I3Q C;  5C44 K;  2NVX C;  4MEX A;  4LK1 A;  1XPP A;  2Y0S L;  1BDF A;  2R92 C;  5IYD C;  2O5I A;  4X6A C;  3GTL K;  1I6H C;  1TWC K;  4A3J C;  4Y7N C;  3S15 C;  3HOZ K;  4QIW D;  5IP7 K;  5M5W K;  3S1M C;  4QJV B;  1SFO K;  4X6A K;  5IYD K;  2PA8 D;  4C3J K;  3HOW C;  4A3I K;  1I3Q K;  4XLP A;  4A93 C;  2WAQ L;  3H0G C;  3S2D C;  4A3I C;  3S1Q K;  4XLN A;  2A6E A;  3HOW K;  4Y52 K;  2PMZ L;  4G7Z A;  5FLM K;  1SFO C;  4XSX A;  5IYC K;  4A3J K;  1TWA C;  3I4M C;  3FKI K;  3GTM K;  1TWC C;  4BXX K;  1I6H K;  1Y1W K;  3H3V D;  4BBR C;  1TWH C;  4C3I C;  3GTJ K;  2NVX K;  2E2H K;  3K7A K;  3EQL A;  2YU9 K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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