3S1MC

Rna polymerase ii initiation complex with a 5-nt rna (variant 1)
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1mC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1mC01
3M4OK 3CQZC 2NVXC 4A3LC 2WB1D 4OIRA 3GTPC 1I6HC 2R93C 3S17C 4A93C 4XLPA 3GTGC 3I4NC 1ZYRA 4G7OA 3H3VL 2PA8L 3GTQK 4X6AC 2NVTK 4BY7C 2PMZL 4Y52K 4A3IK 1I3QC 2WAQL 3GTMK 4C3IC 4XLNA 5M5YK 3PO2K 5C4JC 3GTKK 3S15K 3HOZC 2JA5K 4YFXA 4A3EK 1HQMA 2YU9K 4C3JC 5IYCK 2R92K 5C3EC 3GTLC 3H3VD 3S2DC 1TWGK 3I4MC 2PA8D 4A3DC 5C4XK 5C44K 4A3KK 2A6HA 4A3CC 3H0GK 1TWAC 4MQ9A 2PMZD 4A3JK 2NVQK 1XPPA 3HOVC 2O5IA 4C3HK 4A3BC 1IW7A 3M3YK 4JK1A 5FLMC 1K83C 2A69A 2E2HC 2BE5A 2R7ZK 3HOWK 3CQZK 4Y7NK 2NVXK 4LLGA 5TMCA 3GTPK 2VUMC 1I6HK 4G7HA 5IP7C 3RZDC 4A93K 3GTGK 3I4NK 4BBRK 2E2JC 5IYBC 2PPBA 3S1QC 3WODA 4BBSC 4A3GC 2JA8C 1TWCK 1I50K 1WCMK 4BY1K 4A3BK 3S2HK 4X6AK 1YNJA 2E2IC 1I3QK 3S1RC 3GTOK 4LK1A 1TWFC 4C3IK 4A3FC 4XSZA 1Y1VC 3S16C 4C2MC 3HOZK 3HKZL 3RZOC 3HOXK 4C3JK 5IYDC 5M5WK 4A3MK 2O5JA 2A68A 4YG2A 1Y1WC 3FKIC 3M4OC 2WAQD 4A3CK 4OIOA 1TWAK 2B63K 4OINA 3S1MK 3GTJC 4QIWL 3GTQC 3HOYK 4G7ZA 1I6VA 2NVYC 2B63C 4YFNA 4Y52C 3HKZD 5IP9C 1SFOC 1R9TK 2E2HK 4A3LK 2R93K 3K7AC 3HOUC 3PO2C 3S17K 3S15C 2VUMK 4BXXC 5IP7K 2JA7C 2YU9C 5M5XK 3RZDK 2JA6C 4A3GK 3S1QK 3PO3C 4BBSK 4BY7K 2Y0SL 3S1NC 2WB1L 2E2IK 3S14C 3S1RK 1TWFK 1TWHC 4KN4A 4KN7A 4YFKA 2NVQC 5C4JK 4OIQA 5M3FK 1Y1VK 4A3FK 4Q5SA 5C3EK 3GTLK 4QJVA 4QJVB 3RZOK 3I4MK 3S2DK 4A3DK 2NVYK 4GZYA 4MEXA 2JA7K 2R7ZC 2Y0SD 1BDFA 3FKIK 4Y7NC 5M3MK 1Y1WK 4LJZA 1YNNA 4AYBL 3HOVK 4BBRC 2NVTC 3GTJK 4XSXA 4A3EC 1TWCC 1WCMC 1I50C 4A3IC 2A6EA 3EQLA 4MEYA 4BY1C 3GTMC 3S2HC 1K83K 5FLMK 5IP9K 1SFOK 4KMUA 3GTOC 1SMYA 5TMFA 4Q4ZA 3K7AK 4ZH4A 3GTKC 3HOUK 2JA5C 5IYCC 2R92C 2E2JK 1TWGC 4AYBD 5C4XC 5IYBK 3HOXC 4A3KC 2JA6K 2CW0A 3DXJA 4QIWD 5C44C 4A3MC 4OIPA 2JA8K 3PO3K 4BXXK 3H0GC 4NOIA 3S1NK 4A3JC 3S14K 5FJ8K 1TWHK 3S1MC 3S16K 4LK0A 4C2MK 4C3HC 3HOYC 3M3YC 5IYDK 1R9TC 5D4DA 3HOWC
chains in the Genus database with same CATH superfamily
2NVXC 4OIRA 1ZYRA 2PA8L 3GTPA 3GTQK 2PMZL 4Y52K 2WAQL 1YCLA 4XLNA 1WSRA 3PO2K 3GTOA 3GTKK 3HOZC 2JA5K 2L3UA 5C3EC 2R92A 4MQ9A 3G4AA 1V5VA 3GIRA 3TFJA 2E2HC 5FLMC 3CQZK 4Y7NK 1WOPA 4LLGA 1I6HK 2VUMC 4A93K 5IP7C 3RZDC 4LQYA 2E2JC 4A3EK 2PPBA 4BBSC 1TWCK 1WCMK 4LR2A 1YNJA 1ZQ1C 3LYWA 2PHCB 1IE0A 3RZOC 1Y1VA 4G0WA 4A3MK 3OPFA 4KARA 3FKIC 4A3CK 1DCPA 4U67S 3BUEA 1F7VA 3S1MK 1Y1WA 1RU0A 1VGXA 5IP9C 1SFOC 4C45A 1R9TK 3T00A 1JVIA 3BP3A 3S17K 4IOAS 3S15C 4BXXC 2YU9C 2JA6C 1X31C 3PO3C 3S1NC 2WB1L 4J3NA 1J6WA 1KQ4A 4YFKA 2NVQC 4GTBA 4Q5SA 3GTLK 3S2DK 3I4MK 4A3DK 4GZYA 3SZZA 1PJ6A 2R7ZC 3CAGA 5M3MK 4LJZA 3FKIA 3LPXA 2W7VA 3HOVK 1VRQC 4BBRC 4WCES 4WF9S 3AD8C 4A3BC 4A3IC 1I50C 2A6EA 3GTMC 4IO9S 1ZXOA 3ADAC 1TWGC 4AYBD 3HOXC 4A3KC 2JA8K 3DXJA 5C44C 2YU9A 5TJ3A 3H0GC 1PJ5A 4GTEA 3DLLS 1INNA 3T01A 4C2MK 4C3HC 1BS2A 4FM9A 3HOWC 3M4OK 2R93C 2GSOA 3S0XA 3GTPC 1B4BA 4GT9A 2R7ZA 3AH5A 4G7OA 3H3VL 1IS1A 4BY7C 5EGHA 3LAPA 1I50A 1JOEA 5C4JC 1I3QA 1ZVUA 3HXAA 1XXAA 5IYCK 2R92K 5C4XK 3GDZA 2PA8D 2ZJPS 3FOEA 1WORA 2PMZD 1EFWA 2XCRB 1TWAA 1XPPA 2O5IA 4GTAA 3M3YK 4JK1A 2XCQA 1K83C 4GTLA 4DDQA 1C0AA 2BE5A 1DCOA 2NVXK 2JH3A 1VLOA 3PIPS 4G7HA 2R93A 2KXYA 5IYBC 2GSUA 4A3GC 5E68A 4BY1K 1YX2A 2D6FC 3A8IA 4LK1A 1TWFC 1UV7A 1Y1VC 4WFBS 2E2IA 3N3YA 3HOZK 3FOFA 5M5WK 2O5JA 4GTDA 2A68A 1Y1WC 4P5BA 3GTJC 5IOTA 3GTQC 1VJEA 5CHPA 4Y52C 2E2HK 2NVYA 4A3LK 2B63A 3K7AC 3HOUC 4KC6A 4LOWA 3PO2C 1K83A 5DM7S 1F9NA 1F7UA 3PIOS 4BLBA 2VUMK 4BLAA 5IP7K 3RZDK 5M5XK 1O25A 4RMFA 4KMAA 3QX3A 4BBSK 2Y0SL 2JA7A 3JSTA 3S14C 1EQRA 1TWFA 1USOA 1L0WA 5IORA 1TWHA 4QJVB 3RZOK 1O28A 3OEPA 3AD9C 3FKIK 4Y7NC 1DCHA 3IPJA 1WQFA 2NVTC 4XSXA 4A3EC 1TWCC 1WCMC 3GTJA 3GTQA 2L5NA 5CJ9A 5IP9K 1SFOK 4KMUA 1G51A 4Q4ZA 2CFAB 1JQWA 1IBAA 4BXXK 2JA6K 3GTKA 1HI9A 4QIWD 4A3MC 3CF5S 2JA5A 4OIPA 3PO3K 4NOIA 3S1NK 4A3JC 1J6VA 3S1MC 3S16K 5IYDK 4KAWX 1R9TC 5D4DA 5EGEA 4KM9A 3S17C 4GFQA 4KASA 3GTGC 3I4NC 4KATA 3CQZA 3N0BA 4X6AC 4A3IK 1I3QC 3GTMK 2ZJQS 1TWCA 1WCMA 3GEHA 4C3IC 1EH1A 5M5YK 3A8JA 4KB4A 4WFAS 4C3JC 4WJ4A 3GTLC 3H3VD 1TWGK 3S2DC 3T02A 3I4MC 4A3DC 1XZPA 4A3KK 5C44K 2A6HA 2V6TA 3H0GK 1TWAC 3GSIA 2Y3PA 3HOVC 5JFEA 1XZQA 4C3HK 1WSVA 3TFIA 3HOWK 4P9SA 1R9TA 3GTPK 2P5MA 4KM8A 2P8TA 3VA7A 3S1QC 4G0UA 3GTGA 4O2DA 2JA8C 3S2HK 2E2IC 3S1RC 3GTOK 5JVHS 4G0VA 4A3FC 2ZJRS 2ZUEA 4C2MC 3HKZL 4WJ3M 3G4CA 4PAAA 3GTLA 4YG2A 3L4KA 3M4OC 2WAQD 4OIOA 1EI6A 5DM6S 2KQ1A 4OINA 3HOYK 4G7ZA 1I6VA 2NVYC 2B63C 4P5AA 4YFNA 1BJTA 3V4GA 2JA7C 4A3GK 5JVGS 4ILDA 1TWFK 1TWHC 4KN4A 4KN7A 5M3FK 4OIQA 1Y1VK 4GTCA 5C3EK 4QJVA 3Q3QA 3ERED 2V6SA 2Y0SD 1BDFA 1O2BA 1Y1WK 3TFHA 5L46A 1ZBSA 3GTJK 4BY1C 4BKWA 4MEYA 5FLMK 1F93A 1J98A 1SMYA 5TMFA 3K7AK 4ZH4A 3GTKC 1AB4A 2JA5C 2CFAA 3AQPA 3HOUK 5HL7S 1WQHA 2E2JK 2CW0A 4XCHA 1GE9A 3S14K 1ISEA 1DD5A 3NUHA 1O24A 3AQOA 1O2FB 3CQZC 4A3LC 5IOSA 2WB1D 1I6HC 1O2AA 4A93C 1USMA 3A8KA 1FEUA 3MMLB 4XLPA 3TTGA 1IL2A 2NVXA 1EK8A 3FHZA 2NVTK 1O29A 5JVOA 1B4AA 3S15K 3BP8C 4YFXA 1HQMA 2YU9K 2RH6A 4A3CC 2V6UA 2KWAA 4AH6A 4KMHA 4A3JK 3LAJA 2NVQK 1O26A 1IW7A 1WOSA 2A69A 2R7ZK 2E2HA 5TMCA 3GEIA 3GTGK 3I4NK 4BBRK 3WODA 2VUMA 2GSNA 4A3BK 1I50K 4X6AK 1XXBA 4KDDA 1I3QK 2XCOA 2ZFZA 4C3IK 5HQHA 4XSZA 4WILA 3S16C 3L4JA 3HOXK 4C3JK 5IYDC 4PABA 2GAGC 4IOCS 1TWAK 2FQOA 1PJ7A 4WFNS 1J6XA 1O27A 1IQ0A 1WOOA 4QIWL 3HKZD 3SZYA 1VH2A 2R93K 2GAHC 2ZUFA 1SFOA 2FQTA 1WIHA 3S1QK 4BY7K 2JA6A 1BGWA 2E2IK 5HL8A 3S1RK 5C4JK 4A3FK 2EBBA 5IOQA 4FZBA 4MEXA 1XXCA 1YNNA 4AYBL 1WQGA 3GEEA 2NVYK 4M1XA 2B63K 3OREA 3EQLA 3S2HC 1K83K 3AD7C 4KMDA 3GTOC 4GTFA 3GTMA 3N0CA 5IYCC 2R92C 2RGRA 5IYBK 5C4XC 2JA7K 1XZPB 1TWGA 5FJ8K 3H0GA 1TWHK 4LK0A 4KB2A 3HOYC 2KPUA 3M3YC 1XZQB
chains in the Genus database with same CATH topology
3M4OK 3CQZC 2NVXC 4A3LC 2WB1D 4OIRA 3GTPC 1I6HC 2R93C 3S17C 4A93C 4XLPA 3GTGC 3I4NC 1ZYRA 4G7OA 3H3VL 2PA8L 3GTQK 4X6AC 2NVTK 4BY7C 2PMZL 4Y52K 4A3IK 1I3QC 2WAQL 3GTMK 4C3IC 4XLNA 5M5YK 3PO2K 5C4JC 3GTKK 3S15K 3HOZC 2JA5K 4YFXA 4A3EK 1HQMA 2YU9K 4C3JC 5IYCK 2R92K 5C3EC 3GTLC 3H3VD 3S2DC 1TWGK 3I4MC 2PA8D 4A3DC 5C4XK 5C44K 4A3KK 2A6HA 4A3CC 3H0GK 1TWAC 4MQ9A 2PMZD 4A3JK 2NVQK 1XPPA 3HOVC 2O5IA 4C3HK 4A3BC 1IW7A 3M3YK 4JK1A 5FLMC 1K83C 2A69A 2E2HC 2BE5A 2R7ZK 3HOWK 3CQZK 4Y7NK 2NVXK 4LLGA 5TMCA 3GTPK 2VUMC 1I6HK 4G7HA 5IP7C 3RZDC 4A93K 3GTGK 3I4NK 4BBRK 2E2JC 5IYBC 2PPBA 3S1QC 3WODA 4BBSC 4A3GC 2JA8C 1TWCK 1I50K 1WCMK 4BY1K 4A3BK 3S2HK 4X6AK 1YNJA 2E2IC 1I3QK 3S1RC 3GTOK 4LK1A 1TWFC 4C3IK 4A3FC 4XSZA 1Y1VC 3S16C 4C2MC 3HOZK 3HKZL 3RZOC 3HOXK 4C3JK 5IYDC 5M5WK 4A3MK 2O5JA 2A68A 4YG2A 1Y1WC 3FKIC 3M4OC 2WAQD 4A3CK 4OIOA 1TWAK 2B63K 4OINA 3S1MK 3GTJC 4QIWL 3GTQC 3HOYK 4G7ZA 1I6VA 2NVYC 2B63C 4YFNA 4Y52C 3HKZD 5IP9C 1SFOC 1R9TK 2E2HK 4A3LK 2R93K 3K7AC 3HOUC 3PO2C 3S17K 3S15C 2VUMK 4BXXC 5IP7K 2JA7C 2YU9C 5M5XK 3RZDK 2JA6C 4A3GK 3S1QK 3PO3C 4BBSK 4BY7K 2Y0SL 3S1NC 2WB1L 2E2IK 3S14C 3S1RK 1TWFK 1TWHC 4KN4A 4KN7A 4YFKA 2NVQC 5C4JK 4OIQA 5M3FK 1Y1VK 4A3FK 4Q5SA 5C3EK 3GTLK 4QJVA 4QJVB 3RZOK 3I4MK 3S2DK 4A3DK 2NVYK 4GZYA 4MEXA 2JA7K 2R7ZC 2Y0SD 1BDFA 3FKIK 4Y7NC 5M3MK 1Y1WK 4LJZA 1YNNA 4AYBL 3HOVK 4BBRC 2NVTC 3GTJK 4XSXA 4A3EC 1TWCC 1WCMC 1I50C 4A3IC 2A6EA 3EQLA 4MEYA 4BY1C 3GTMC 3S2HC 1K83K 5FLMK 5IP9K 1SFOK 4KMUA 3GTOC 1SMYA 5TMFA 4Q4ZA 3K7AK 4ZH4A 3GTKC 3HOUK 2JA5C 5IYCC 2R92C 2E2JK 1TWGC 4AYBD 5C4XC 5IYBK 3HOXC 4A3KC 2JA6K 2CW0A 3DXJA 4QIWD 5C44C 4A3MC 4OIPA 2JA8K 3PO3K 4BXXK 3H0GC 4NOIA 3S1NK 4A3JC 3S14K 5FJ8K 1TWHK 3S1MC 3S16K 4LK0A 4C2MK 4C3HC 3HOYC 3M3YC 5IYDK 1R9TC 5D4DA 3HOWC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3M4O K;  3CQZ C;  2NVX C;  4A3L C;  2WB1 D;  4OIR A;  3GTP C;  1I6H C;  2R93 C;  3S17 C;  4A93 C;  4XLP A;  3GTG C;  3I4N C;  1ZYR A;  4G7O A;  3H3V L;  2PA8 L;  3GTQ K;  4X6A C;  2NVT K;  4BY7 C;  2PMZ L;  4Y52 K;  4A3I K;  1I3Q C;  2WAQ L;  3GTM K;  4C3I C;  4XLN A;  5M5Y K;  3PO2 K;  5C4J C;  3GTK K;  3S15 K;  3HOZ C;  2JA5 K;  4YFX A;  4A3E K;  1HQM A;  2YU9 K;  4C3J C;  5IYC K;  2R92 K;  5C3E C;  3GTL C;  3H3V D;  3S2D C;  1TWG K;  3I4M C;  2PA8 D;  4A3D C;  5C4X K;  5C44 K;  4A3K K;  2A6H A;  4A3C C;  3H0G K;  1TWA C;  4MQ9 A;  2PMZ D;  4A3J K;  2NVQ K;  1XPP A;  3HOV C;  2O5I A;  4C3H K;  4A3B C;  1IW7 A;  3M3Y K;  4JK1 A;  5FLM C;  1K83 C;  2A69 A;  2E2H C;  2BE5 A;  2R7Z K;  3HOW K;  3CQZ K;  4Y7N K;  2NVX K;  4LLG A;  5TMC A;  3GTP K;  2VUM C;  1I6H K;  4G7H A;  5IP7 C;  3RZD C;  4A93 K;  3GTG K;  3I4N K;  4BBR K;  2E2J C;  5IYB C;  2PPB A;  3S1Q C;  3WOD A;  4BBS C;  4A3G C;  2JA8 C;  1TWC K;  1I50 K;  1WCM K;  4BY1 K;  4A3B K;  3S2H K;  4X6A K;  1YNJ A;  2E2I C;  1I3Q K;  3S1R C;  3GTO K;  4LK1 A;  1TWF C;  4C3I K;  4A3F C;  4XSZ A;  1Y1V C;  3S16 C;  4C2M C;  3HOZ K;  3HKZ L;  3RZO C;  3HOX K;  4C3J K;  5IYD C;  5M5W K;  4A3M K;  2O5J A;  2A68 A;  4YG2 A;  1Y1W C;  3FKI C;  3M4O C;  2WAQ D;  4A3C K;  4OIO A;  1TWA K;  2B63 K;  4OIN A;  3S1M K;  3GTJ C;  4QIW L;  3GTQ C;  3HOY K;  4G7Z A;  1I6V A;  2NVY C;  2B63 C;  4YFN A;  4Y52 C;  3HKZ D;  5IP9 C;  1SFO C;  1R9T K;  2E2H K;  4A3L K;  2R93 K;  3K7A C;  3HOU C;  3PO2 C;  3S17 K;  3S15 C;  2VUM K;  4BXX C;  5IP7 K;  2JA7 C;  2YU9 C;  5M5X K;  3RZD K;  2JA6 C;  4A3G K;  3S1Q K;  3PO3 C;  4BBS K;  4BY7 K;  2Y0S L;  3S1N C;  2WB1 L;  2E2I K;  3S14 C;  3S1R K;  1TWF K;  1TWH C;  4KN4 A;  4KN7 A;  4YFK A;  2NVQ C;  5C4J K;  4OIQ A;  5M3F K;  1Y1V K;  4A3F K;  4Q5S A;  5C3E K;  3GTL K;  4QJV A;  4QJV B;  3RZO K;  3I4M K;  3S2D K;  4A3D K;  2NVY K;  4GZY A;  4MEX A;  2JA7 K;  2R7Z C;  2Y0S D;  1BDF A;  3FKI K;  4Y7N C;  5M3M K;  1Y1W K;  4LJZ A;  1YNN A;  4AYB L;  3HOV K;  4BBR C;  2NVT C;  3GTJ K;  4XSX A;  4A3E C;  1TWC C;  1WCM C;  1I50 C;  4A3I C;  2A6E A;  3EQL A;  4MEY A;  4BY1 C;  3GTM C;  3S2H C;  1K83 K;  5FLM K;  5IP9 K;  1SFO K;  4KMU A;  3GTO C;  1SMY A;  5TMF A;  4Q4Z A;  3K7A K;  4ZH4 A;  3GTK C;  3HOU K;  2JA5 C;  5IYC C;  2R92 C;  2E2J K;  1TWG C;  4AYB D;  5C4X C;  5IYB K;  3HOX C;  4A3K C;  2JA6 K;  2CW0 A;  3DXJ A;  4QIW D;  5C44 C;  4A3M C;  4OIP A;  2JA8 K;  3PO3 K;  4BXX K;  3H0G C;  4NOI A;  3S1N K;  4A3J C;  3S14 K;  5FJ8 K;  1TWH K;  3S1M C;  3S16 K;  4LK0 A;  4C2M K;  4C3H C;  3HOY C;  3M3Y C;  5IYD K;  1R9T C;  5D4D A;  3HOW C; 
#chains in the Genus database with same CATH topology
 2NVX C;  4OIR A;  1ZYR A;  2PA8 L;  3GTP A;  3GTQ K;  2PMZ L;  4Y52 K;  2WAQ L;  1YCL A;  4XLN A;  1WSR A;  3PO2 K;  3GTO A;  3GTK K;  3HOZ C;  2JA5 K;  2L3U A;  5C3E C;  2R92 A;  4MQ9 A;  3G4A A;  1V5V A;  3GIR A;  3TFJ A;  2E2H C;  5FLM C;  3CQZ K;  4Y7N K;  1WOP A;  4LLG A;  1I6H K;  2VUM C;  4A93 K;  5IP7 C;  3RZD C;  4LQY A;  2E2J C;  4A3E K;  2PPB A;  4BBS C;  1TWC K;  1WCM K;  4LR2 A;  1YNJ A;  1ZQ1 C;  3LYW A;  2PHC B;  1IE0 A;  3RZO C;  1Y1V A;  4G0W A;  4A3M K;  3OPF A;  4KAR A;  3FKI C;  4A3C K;  1DCP A;  4U67 S;  3BUE A;  1F7V A;  3S1M K;  1Y1W A;  1RU0 A;  1VGX A;  5IP9 C;  1SFO C;  4C45 A;  1R9T K;  3T00 A;  1JVI A;  3BP3 A;  3S17 K;  4IOA S;  3S15 C;  4BXX C;  2YU9 C;  2JA6 C;  1X31 C;  3PO3 C;  3S1N C;  2WB1 L;  4J3N A;  1J6W A;  1KQ4 A;  4YFK A;  2NVQ C;  4GTB A;  4Q5S A;  3GTL K;  3S2D K;  3I4M K;  4A3D K;  4GZY A;  3SZZ A;  1PJ6 A;  2R7Z C;  3CAG A;  5M3M K;  4LJZ A;  3FKI A;  3LPX A;  2W7V A;  3HOV K;  1VRQ C;  4BBR C;  4WCE S;  4WF9 S;  3AD8 C;  4A3B C;  4A3I C;  1I50 C;  2A6E A;  3GTM C;  4IO9 S;  1ZXO A;  3ADA C;  1TWG C;  4AYB D;  3HOX C;  4A3K C;  2JA8 K;  3DXJ A;  5C44 C;  2YU9 A;  5TJ3 A;  3H0G C;  1PJ5 A;  4GTE A;  3DLL S;  1INN A;  3T01 A;  4C2M K;  4C3H C;  1BS2 A;  4FM9 A;  3HOW C;  3M4O K;  2R93 C;  2GSO A;  3S0X A;  3GTP C;  1B4B A;  4GT9 A;  2R7Z A;  3AH5 A;  4G7O A;  3H3V L;  1IS1 A;  4BY7 C;  5EGH A;  3LAP A;  1I50 A;  1JOE A;  5C4J C;  1I3Q A;  1ZVU A;  3HXA A;  1XXA A;  5IYC K;  2R92 K;  5C4X K;  3GDZ A;  2PA8 D;  2ZJP S;  3FOE A;  1WOR A;  2PMZ D;  1EFW A;  2XCR B;  1TWA A;  1XPP A;  2O5I A;  4GTA A;  3M3Y K;  4JK1 A;  2XCQ A;  1K83 C;  4GTL A;  4DDQ A;  1C0A A;  2BE5 A;  1DCO A;  2NVX K;  2JH3 A;  1VLO A;  3PIP S;  4G7H A;  2R93 A;  2KXY A;  5IYB C;  2GSU A;  4A3G C;  5E68 A;  4BY1 K;  1YX2 A;  2D6F C;  3A8I A;  4LK1 A;  1TWF C;  1UV7 A;  1Y1V C;  4WFB S;  2E2I A;  3N3Y A;  3HOZ K;  3FOF A;  5M5W K;  2O5J A;  4GTD A;  2A68 A;  1Y1W C;  4P5B A;  3GTJ C;  5IOT A;  3GTQ C;  1VJE A;  5CHP A;  4Y52 C;  2E2H K;  2NVY A;  4A3L K;  2B63 A;  3K7A C;  3HOU C;  4KC6 A;  4LOW A;  3PO2 C;  1K83 A;  5DM7 S;  1F9N A;  1F7U A;  3PIO S;  4BLB A;  2VUM K;  4BLA A;  5IP7 K;  3RZD K;  5M5X K;  1O25 A;  4RMF A;  4KMA A;  3QX3 A;  4BBS K;  2Y0S L;  2JA7 A;  3JST A;  3S14 C;  1EQR A;  1TWF A;  1USO A;  1L0W A;  5IOR A;  1TWH A;  4QJV B;  3RZO K;  1O28 A;  3OEP A;  3AD9 C;  3FKI K;  4Y7N C;  1DCH A;  3IPJ A;  1WQF A;  2NVT C;  4XSX A;  4A3E C;  1TWC C;  1WCM C;  3GTJ A;  3GTQ A;  2L5N A;  5CJ9 A;  5IP9 K;  1SFO K;  4KMU A;  1G51 A;  4Q4Z A;  2CFA B;  1JQW A;  1IBA A;  4BXX K;  2JA6 K;  3GTK A;  1HI9 A;  4QIW D;  4A3M C;  3CF5 S;  2JA5 A;  4OIP A;  3PO3 K;  4NOI A;  3S1N K;  4A3J C;  1J6V A;  3S1M C;  3S16 K;  5IYD K;  4KAW X;  1R9T C;  5D4D A;  5EGE A;  4KM9 A;  3S17 C;  4GFQ A;  4KAS A;  3GTG C;  3I4N C;  4KAT A;  3CQZ A;  3N0B A;  4X6A C;  4A3I K;  1I3Q C;  3GTM K;  2ZJQ S;  1TWC A;  1WCM A;  3GEH A;  4C3I C;  1EH1 A;  5M5Y K;  3A8J A;  4KB4 A;  4WFA S;  4C3J C;  4WJ4 A;  3GTL C;  3H3V D;  1TWG K;  3S2D C;  3T02 A;  3I4M C;  4A3D C;  1XZP A;  4A3K K;  5C44 K;  2A6H A;  2V6T A;  3H0G K;  1TWA C;  3GSI A;  2Y3P A;  3HOV C;  5JFE A;  1XZQ A;  4C3H K;  1WSV A;  3TFI A;  3HOW K;  4P9S A;  1R9T A;  3GTP K;  2P5M A;  4KM8 A;  2P8T A;  3VA7 A;  3S1Q C;  4G0U A;  3GTG A;  4O2D A;  2JA8 C;  3S2H K;  2E2I C;  3S1R C;  3GTO K;  5JVH S;  4G0V A;  4A3F C;  2ZJR S;  2ZUE A;  4C2M C;  3HKZ L;  4WJ3 M;  3G4C A;  4PAA A;  3GTL A;  4YG2 A;  3L4K A;  3M4O C;  2WAQ D;  4OIO A;  1EI6 A;  5DM6 S;  2KQ1 A;  4OIN A;  3HOY K;  4G7Z A;  1I6V A;  2NVY C;  2B63 C;  4P5A A;  4YFN A;  1BJT A;  3V4G A;  2JA7 C;  4A3G K;  5JVG S;  4ILD A;  1TWF K;  1TWH C;  4KN4 A;  4KN7 A;  5M3F K;  4OIQ A;  1Y1V K;  4GTC A;  5C3E K;  4QJV A;  3Q3Q A;  3ERE D;  2V6S A;  2Y0S D;  1BDF A;  1O2B A;  1Y1W K;  3TFH A;  5L46 A;  1ZBS A;  3GTJ K;  4BY1 C;  4BKW A;  4MEY A;  5FLM K;  1F93 A;  1J98 A;  1SMY A;  5TMF A;  3K7A K;  4ZH4 A;  3GTK C;  1AB4 A;  2JA5 C;  2CFA A;  3AQP A;  3HOU K;  5HL7 S;  1WQH A;  2E2J K;  2CW0 A;  4XCH A;  1GE9 A;  3S14 K;  1ISE A;  1DD5 A;  3NUH A;  1O24 A;  3AQO A;  1O2F B;  3CQZ C;  4A3L C;  5IOS A;  2WB1 D;  1I6H C;  1O2A A;  4A93 C;  1USM A;  3A8K A;  1FEU A;  3MML B;  4XLP A;  3TTG A;  1IL2 A;  2NVX A;  1EK8 A;  3FHZ A;  2NVT K;  1O29 A;  5JVO A;  1B4A A;  3S15 K;  3BP8 C;  4YFX A;  1HQM A;  2YU9 K;  2RH6 A;  4A3C C;  2V6U A;  2KWA A;  4AH6 A;  4KMH A;  4A3J K;  3LAJ A;  2NVQ K;  1O26 A;  1IW7 A;  1WOS A;  2A69 A;  2R7Z K;  2E2H A;  5TMC A;  3GEI A;  3GTG K;  3I4N K;  4BBR K;  3WOD A;  2VUM A;  2GSN A;  4A3B K;  1I50 K;  4X6A K;  1XXB A;  4KDD A;  1I3Q K;  2XCO A;  2ZFZ A;  4C3I K;  5HQH A;  4XSZ A;  4WIL A;  3S16 C;  3L4J A;  3HOX K;  4C3J K;  5IYD C;  4PAB A;  2GAG C;  4IOC S;  1TWA K;  2FQO A;  1PJ7 A;  4WFN S;  1J6X A;  1O27 A;  1IQ0 A;  1WOO A;  4QIW L;  3HKZ D;  3SZY A;  1VH2 A;  2R93 K;  2GAH C;  2ZUF A;  1SFO A;  2FQT A;  1WIH A;  3S1Q K;  4BY7 K;  2JA6 A;  1BGW A;  2E2I K;  5HL8 A;  3S1R K;  5C4J K;  4A3F K;  2EBB A;  5IOQ A;  4FZB A;  4MEX A;  1XXC A;  1YNN A;  4AYB L;  1WQG A;  3GEE A;  2NVY K;  4M1X A;  2B63 K;  3ORE A;  3EQL A;  3S2H C;  1K83 K;  3AD7 C;  4KMD A;  3GTO C;  4GTF A;  3GTM A;  3N0C A;  5IYC C;  2R92 C;  2RGR A;  5IYB K;  5C4X C;  2JA7 K;  1XZP B;  1TWG A;  5FJ8 K;  3H0G A;  1TWH K;  4LK0 A;  4KB2 A;  3HOY C;  2KPU A;  3M3Y C;  1XZQ B; 
#chains in the Genus database with same CATH homology
 3M4O K;  3CQZ C;  2NVX C;  4A3L C;  2WB1 D;  4OIR A;  3GTP C;  1I6H C;  2R93 C;  3S17 C;  4A93 C;  4XLP A;  3GTG C;  3I4N C;  1ZYR A;  4G7O A;  3H3V L;  2PA8 L;  3GTQ K;  4X6A C;  2NVT K;  4BY7 C;  2PMZ L;  4Y52 K;  4A3I K;  1I3Q C;  2WAQ L;  3GTM K;  4C3I C;  4XLN A;  5M5Y K;  3PO2 K;  5C4J C;  3GTK K;  3S15 K;  3HOZ C;  2JA5 K;  4YFX A;  4A3E K;  1HQM A;  2YU9 K;  4C3J C;  5IYC K;  2R92 K;  5C3E C;  3GTL C;  3H3V D;  3S2D C;  1TWG K;  3I4M C;  2PA8 D;  4A3D C;  5C4X K;  5C44 K;  4A3K K;  2A6H A;  4A3C C;  3H0G K;  1TWA C;  4MQ9 A;  2PMZ D;  4A3J K;  2NVQ K;  1XPP A;  3HOV C;  2O5I A;  4C3H K;  4A3B C;  1IW7 A;  3M3Y K;  4JK1 A;  5FLM C;  1K83 C;  2A69 A;  2E2H C;  2BE5 A;  2R7Z K;  3HOW K;  3CQZ K;  4Y7N K;  2NVX K;  4LLG A;  5TMC A;  3GTP K;  2VUM C;  1I6H K;  4G7H A;  5IP7 C;  3RZD C;  4A93 K;  3GTG K;  3I4N K;  4BBR K;  2E2J C;  5IYB C;  2PPB A;  3S1Q C;  3WOD A;  4BBS C;  4A3G C;  2JA8 C;  1TWC K;  1I50 K;  1WCM K;  4BY1 K;  4A3B K;  3S2H K;  4X6A K;  1YNJ A;  2E2I C;  1I3Q K;  3S1R C;  3GTO K;  4LK1 A;  1TWF C;  4C3I K;  4A3F C;  4XSZ A;  1Y1V C;  3S16 C;  4C2M C;  3HOZ K;  3HKZ L;  3RZO C;  3HOX K;  4C3J K;  5IYD C;  5M5W K;  4A3M K;  2O5J A;  2A68 A;  4YG2 A;  1Y1W C;  3FKI C;  3M4O C;  2WAQ D;  4A3C K;  4OIO A;  1TWA K;  2B63 K;  4OIN A;  3S1M K;  3GTJ C;  4QIW L;  3GTQ C;  3HOY K;  4G7Z A;  1I6V A;  2NVY C;  2B63 C;  4YFN A;  4Y52 C;  3HKZ D;  5IP9 C;  1SFO C;  1R9T K;  2E2H K;  4A3L K;  2R93 K;  3K7A C;  3HOU C;  3PO2 C;  3S17 K;  3S15 C;  2VUM K;  4BXX C;  5IP7 K;  2JA7 C;  2YU9 C;  5M5X K;  3RZD K;  2JA6 C;  4A3G K;  3S1Q K;  3PO3 C;  4BBS K;  4BY7 K;  2Y0S L;  3S1N C;  2WB1 L;  2E2I K;  3S14 C;  3S1R K;  1TWF K;  1TWH C;  4KN4 A;  4KN7 A;  4YFK A;  2NVQ C;  5C4J K;  4OIQ A;  5M3F K;  1Y1V K;  4A3F K;  4Q5S A;  5C3E K;  3GTL K;  4QJV A;  4QJV B;  3RZO K;  3I4M K;  3S2D K;  4A3D K;  2NVY K;  4GZY A;  4MEX A;  2JA7 K;  2R7Z C;  2Y0S D;  1BDF A;  3FKI K;  4Y7N C;  5M3M K;  1Y1W K;  4LJZ A;  1YNN A;  4AYB L;  3HOV K;  4BBR C;  2NVT C;  3GTJ K;  4XSX A;  4A3E C;  1TWC C;  1WCM C;  1I50 C;  4A3I C;  2A6E A;  3EQL A;  4MEY A;  4BY1 C;  3GTM C;  3S2H C;  1K83 K;  5FLM K;  5IP9 K;  1SFO K;  4KMU A;  3GTO C;  1SMY A;  5TMF A;  4Q4Z A;  3K7A K;  4ZH4 A;  3GTK C;  3HOU K;  2JA5 C;  5IYC C;  2R92 C;  2E2J K;  1TWG C;  4AYB D;  5C4X C;  5IYB K;  3HOX C;  4A3K C;  2JA6 K;  2CW0 A;  3DXJ A;  4QIW D;  5C44 C;  4A3M C;  4OIP A;  2JA8 K;  3PO3 K;  4BXX K;  3H0G C;  4NOI A;  3S1N K;  4A3J C;  3S14 K;  5FJ8 K;  1TWH K;  3S1M C;  3S16 K;  4LK0 A;  4C2M K;  4C3H C;  3HOY C;  3M3Y C;  5IYD K;  1R9T C;  5D4D A;  3HOW C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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