3S1QC

Rna polymerase ii initiation complex with a 5-nt 3'-deoxy rna soaked with atp
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1qC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1qC01
3HOYC 3GTGC 4Y52K 2NVXC 3K7AK 4KMUA 4OIOA 4BBSC 2PMZL 4QJVB 2JA6K 3DXJA 2R92K 2WB1D 3HKZD 4LK1A 4NOIA 4A3BC 4GZYA 3S2HK 3S2DK 3HKZL 4X6AC 4BBRK 2E2HK 2NVYK 1BDFA 3H0GC 3S14K 3I4NC 3HOVK 4LK0A 3GTLC 1I6HC 4KN7A 2Y0SL 1Y1WK 4BBSK 1YNJA 4C3IC 2E2JC 5FJ8K 3RZOK 5IYDC 3M4OC 3PO3K 3GTGK 2A69A 4LJZA 2R7ZC 1TWFC 3FKIC 2WB1L 2PPBA 5C44K 3S1QK 2R92C 3S15K 3PO3C 3RZOC 5IP9C 4A3EC 3GTJC 4YFNA 4AYBL 2JA7K 4A3JK 3S1RK 4AYBD 2Y0SD 3HOWC 3S1MK 2B63C 3HOVC 3I4NK 4C3HK 5IP7K 4A3LC 3M3YC 1R9TC 2PA8L 4YFKA 3HOZC 4C2MK 4A3BK 5M5WK 2O5IA 3HOWK 1I3QC 4LLGA 1TWCK 4MEYA 2NVQC 2A6EA 4Y52C 2WAQD 3S15C 5C4JK 2NVQK 3S1QC 4XSZA 1Y1VK 4A3MK 3I4MK 3HOXK 3GTQK 3GTQC 3CQZC 3I4MC 4G7HA 4BXXC 4C2MC 4A3CC 3HOZK 4QIWL 4A93C 4A3KK 5IYDK 5C3EK 1ZYRA 4C3HC 5IP7C 1I6HK 5FLMC 2YU9C 1TWAC 1TWAK 3RZDK 1K83K 3GTKK 3GTJK 2CW0A 2JA7C 4BBRC 2WAQL 1HQMA 2VUMC 4A3EK 4X6AK 2A68A 4OIPA 3HOUC 3PO2C 1XPPA 2R93K 5M3MK 2JA5K 3K7AC 3S1MC 5IP9K 1SFOK 4MEXA 2PMZD 1TWCC 4OIRA 3WODA 3GTPC 4BY1K 2R93C 3FKIK 5C44C 1TWFK 3HOUK 4G7ZA 2NVYC 5IYBC 2E2IC 4ZH4A 4Q5SA 1WCMC 4MQ9A 3S1NC 3H3VL 3S1NK 4XSXA 4Y7NC 2A6HA 4BY7K 2E2HC 2NVXK 4QJVA 1YNNA 1SFOC 2O5JA 3S2HC 3HOXC 1IW7A 2JA6C 5TMFA 3GTPK 5M3FK 2R7ZK 4YG2A 3S16K 4XLPA 2VUMK 3HOYK 2NVTC 4BY7C 3S17C 1K83C 1Y1WC 3GTLK 5C4XC 3PO2K 3S14C 4A3DC 5IYCC 4A3FK 4C3JC 1R9TK 5C3EC 4A3GC 4A3GK 4A3KC 4A93K 4C3JK 1TWHK 3RZDC 3GTKC 1I50C 3GTMC 4OIQA 5C4XK 5FLMK 1Y1VC 2YU9K 3S17K 1TWGC 5D4DA 4A3IK 4A3IC 1TWGK 3S16C 3GTOK 4A3CK 4BXXK 2JA5C 4KN4A 1I50K 3GTMK 4A3MC 3GTOC 5C4JC 5TMCA 2PA8D 4JK1A 3M3YK 3M4OK 4C3IK 2BE5A 2E2JK 4A3FC 2JA8C 4XLNA 5IYCK 1I3QK 4Y7NK 4OINA 1SMYA 1WCMK 3S1RC 2JA8K 3H0GK 1TWHC 5M5XK 2NVTK 3EQLA 4G7OA 4A3LK 4YFXA 5IYBK 2E2IK 4Q4ZA 3S2DC 4A3DK 1I6VA 3CQZK 2B63K 5M5YK 4QIWD 4BY1C 4A3JC 3H3VD
chains in the Genus database with same CATH superfamily
3HOYC 1F9NA 5L46A 4OIOA 3HKZD 4LK1A 5IOQA 4A3BC 3HKZL 1BDFA 1K83A 3S14K 3I4NC 1TWHA 3LYWA 4IOCS 4BKWA 5FJ8K 3RZOK 3PO3K 3GTGK 4DDQA 4LJZA 2XCRB 2ZJPS 2PPBA 3TTGA 3S0XA 2R92C 3S1RK 1JOEA 4KMAA 4GFQA 4LOWA 4XCHA 5IP7K 1WSVA 2PHCB 2JA7A 3M3YC 1ISEA 5M5WK 2NVXA 2GAGC 1EH1A 2Y3PA 3S15C 1BGWA 2L3UA 5C4JK 2NVQK 5IOTA 3I4MK 3GTQK 2VUMA 2R93A 4A3KK 4AH6A 4WILA 4C3HC 5IOSA 3AH5A 1TWAC 3GTKK 2WAQL 4BBRC 1XZPB 1XZPA 3HOUC 5HL8A 2JA5K 2V6UA 1IS1A 5JVHS 1WQFA 2R93C 1IL2A 1TWFK 2NVYC 4ZH4A 4G0VA 4P5BA 1B4AA 3H3VL 1JVIA 2A6HA 2NVXK 1YNNA 3SZZA 2ZJRS 4XLPA 3HOYK 2NVTC 1Y1WC 3TFIA 5C4XC 3LAPA 2V6TA 4C3JC 5C3EC 1IQ0A 4A3KC 4A93K 4P5AA 2RH6A 1I50C 3GTMC 1G51A 2R7ZA 5FLMK 2YU9K 4A3IK 3TFJA 1WSRA 4A3CK 3BP3A 4KN4A 1L0WA 2PA8D 3ADAC 5HQHA 3A8KA 1J98A 4LR2A 4J3NA 2BE5A 1VLOA 5IYCK 4U67S 4XLNA 1SMYA 1WCMK 3S1RC 2JA8K 1PJ6A 4A3LK 1O29A 3S2DC 2P8TA 3G4AA 3H3VD 4Y52K 4KMUA 3AD7C 4QJVB 2R92K 4G0WA 3L4JA 2JA6K 3S2DK 4X6AC 2FQTA 2NVYK 4KB2A 2E2HK 1DD5A 3GSIA 2E2JC 3T01A 3LAJA 5IYDC 3M4OC 2YU9A 1IE0A 4KMDA 2R7ZC 1I50A 5C44K 3FKIC 1TWCA 3GTMA 4WCES 1VH2A 4BLBA 3GTLA 4AYBL 4A3EC 4YFNA 3SZYA 5JVOA 4AYBD 3I4NK 4C3HK 2EBBA 4GTFA 1IBAA 4GTAA 4YFKA 3HOZC 5E68A 4C2MK 1J6XA 4KM8A 3HOWK 1I3QC 1TWCK 4ILDA 1X31C 2B63A 3AQOA 3JSTA 4XSZA 4GTLA 4PABA 4A3MK 3HOXK 1XZQB 4G7HA 4A3CC 4C2MC 1O24A 5TJ3A 3FOFA 4QIWL 3HOZK 2NVYA 1KQ4A 3A8JA 3AD8C 5EGHA 3RZDK 4GTCA 3GTJK 2CW0A 4A3EK 2VUMC 4X6AK 3H0GA 5HL7S 3V4GA 5M3MK 1VJEA 3K7AC 3S1MC 1B4BA 3OEPA 4MEXA 5IP9K 2PMZD 1SFOK 3GTKA 3N3YA 1TWCC 4BY1K 3GTPC 1EQRA 3FKIK 3MMLB 3S1NK 4QJVA 2CFAB 1ZVUA 3L4KA 3FOEA 4WFAS 2R7ZK 5M3FK 5CHPA 1K83C 1TWGA 3PO2K 3S14C 5IYCC 1R9TK 1WORA 4C3JK 2E2HA 5JVGS 1USOA 1HI9A 3TFHA 2JH3A 3IPJA 3GTOK 4BXXK 3G4CA 4A3MC 2KPUA 4IOAS 5TMCA 3M3YK 2XCQA 4OINA 1RU0A 4BLAA 1TWHC 3GTOA 3GEIA 4A3DK 1WCMA 3CQZK 5M5YK 3GIRA 3I4MC 4A3JC 1C0AA 1ZXOA 4IO9S 1JQWA 4WFBS 3K7AK 2PMZL 3DXJA 3S2HK 1USMA 3GEEA 4PAAA 4BBRK 3CQZA 2KWAA 3H0GC 1DCPA 3HOVK 3GTLC 4KN7A 1YNJA 2GSUA 2RGRA 1AB4A 1TWAA 4WFNS 1GE9A 2A69A 2WB1L 1TWFC 3BP8C 1EFWA 3PO3C 3RZOC 4C45A 5IP9C 1O28A 2JA7K 3S1MK 1WIHA 4A3JK 2Y0SD 2B63C 2CFAA 3FKIA 1V5VA 4A3LC 1R9TC 4O2DA 5EGEA 1O25A 4A3BK 1FEUA 4G0UA 4KATA 2KXYA 2W7VA 2A6EA 4Y52C 3S1QC 1Y1VK 3Q3QA 3CQZC 2ZUFA 4BXXC 1VGXA 4A93C 1I3QA 3CAGA 5C3EK 2KQ1A 1I6HK 5FLMC 2YU9C 1K83K 3A8IA 5DM7S 2JA7C 1INNA 1HQMA 1Y1WA 4WF9S 4OIPA 2R93K 1WQHA 1XPPA 3N0BA 3AQPA 1WOOA 4RMFA 4OIRA 3WODA 3HOUK 1SFOA 5IYBC 4KARA 4P9SA 3VA7A 1VRQC 3S1NC 1Y1VA 3GTPA 1R9TA 1SFOC 2O5JA 1XXCA 3T02A 3HXAA 3HOXC 1O26A 2JA6C 5TMFA 1ZQ1C 1F7UA 2FQOA 3GTPK 3S17C 3ERED 1F7VA 2JA6A 4A3GK 1TWHK 3PIOS 3GTKC 5C4XK 3S17K 1TWGC 1O2FB 1BJTA 3S16C 1WOPA 2V6SA 2JA5C 5JFEA 2ZFZA 1I50K 1F93A 3GTMK 1EK8A 1XZQA 3GTOC 4KAWX 5C4JC 3M4OK 4C3IK 2E2JK 4A3FC 4M1XA 4Y7NK 1I3QK 5DM6S 4KDDA 3NUHA 3H0GK 5M5XK 2NVTK 3EQLA 4YFXA 5IYBK 3OREA 1O27A 4QIWD 4BY1C 3QX3A 3GTGC 1DCHA 2NVXC 4KB4A 4BBSC 5IORA 1XXBA 2WB1D 4NOIA 4GZYA 1O2AA 1ZBSA 4LK0A 1Y1WK 1I6HC 2Y0SL 1J6VA 4BBSK 4C3IC 1WOSA 4GT9A 3S1QK 3S15K 3PIPS 3GTJC 4FZBA 1O2BA 4KC6A 3HOWC 3HOVC 2PA8L 3GTGA 2O5IA 4LLGA 4MEYA 2NVQC 2WAQD 3GTQC 2R92A 2XCOA 5IYDK 1PJ7A 1ZYRA 5IP7C 1TWAK 1EI6A 4WJ4A 3GTQA 2A68A 3PO2C 4KMHA 3GTJA 3FHZA 1BS2A 4WJ3M 3BUEA 5C44C 4G7ZA 3DLLS 2E2IC 2JA5A 4Q5SA 1WCMC 4MQ9A 2ZJQS 4KASA 2ZUEA 4XSXA 4Y7NC 4GTDA 2L5NA 4BY7K 2E2HC 1DCOA 2P5MA 3S2HC 3LPXA 1IW7A 3CF5S 3S16K 4YG2A 1UV7A 3OPFA 2VUMK 1J6WA 4BY7C 3GTLK 3N0CA 4A3DC 4A3FK 4A3GC 3GEHA 3RZDC 2GSOA 4OIQA 1Y1VC 4LQYA 4FM9A 5D4DA 2GAHC 4A3IC 1TWGK 2E2IA 4GTBA 2GSNA 2D6FC 1YX2A 1WQGA 4KM9A 4JK1A 1PJ5A 1TWFA 3GDZA 3T00A 2JA8C 3AD9C 4GTEA 4G7OA 2E2IK 4Q4ZA 1XXAA 1I6VA 1YCLA 5CJ9A 2B63K
chains in the Genus database with same CATH topology
3HOYC 3GTGC 4Y52K 2NVXC 3K7AK 4KMUA 4OIOA 4BBSC 2PMZL 4QJVB 2JA6K 3DXJA 2R92K 2WB1D 3HKZD 4LK1A 4NOIA 4A3BC 4GZYA 3S2HK 3S2DK 3HKZL 4X6AC 4BBRK 2E2HK 2NVYK 1BDFA 3H0GC 3S14K 3I4NC 3HOVK 4LK0A 3GTLC 1I6HC 4KN7A 2Y0SL 1Y1WK 4BBSK 1YNJA 4C3IC 2E2JC 5FJ8K 3RZOK 5IYDC 3M4OC 3PO3K 3GTGK 2A69A 4LJZA 2R7ZC 1TWFC 3FKIC 2WB1L 2PPBA 5C44K 3S1QK 2R92C 3S15K 3PO3C 3RZOC 5IP9C 4A3EC 3GTJC 4YFNA 4AYBL 2JA7K 4A3JK 3S1RK 4AYBD 2Y0SD 3HOWC 3S1MK 2B63C 3HOVC 3I4NK 4C3HK 5IP7K 4A3LC 3M3YC 1R9TC 2PA8L 4YFKA 3HOZC 4C2MK 4A3BK 5M5WK 2O5IA 3HOWK 1I3QC 4LLGA 1TWCK 4MEYA 2NVQC 2A6EA 4Y52C 2WAQD 3S15C 5C4JK 2NVQK 3S1QC 4XSZA 1Y1VK 4A3MK 3I4MK 3HOXK 3GTQK 3GTQC 3CQZC 3I4MC 4G7HA 4BXXC 4C2MC 4A3CC 3HOZK 4QIWL 4A93C 4A3KK 5IYDK 5C3EK 1ZYRA 4C3HC 5IP7C 1I6HK 5FLMC 2YU9C 1TWAC 1TWAK 3RZDK 1K83K 3GTKK 3GTJK 2CW0A 2JA7C 4BBRC 2WAQL 1HQMA 2VUMC 4A3EK 4X6AK 2A68A 4OIPA 3HOUC 3PO2C 1XPPA 2R93K 5M3MK 2JA5K 3K7AC 3S1MC 5IP9K 1SFOK 4MEXA 2PMZD 1TWCC 4OIRA 3WODA 3GTPC 4BY1K 2R93C 3FKIK 5C44C 1TWFK 3HOUK 4G7ZA 2NVYC 5IYBC 2E2IC 4ZH4A 4Q5SA 1WCMC 4MQ9A 3S1NC 3H3VL 3S1NK 4XSXA 4Y7NC 2A6HA 4BY7K 2E2HC 2NVXK 4QJVA 1YNNA 1SFOC 2O5JA 3S2HC 3HOXC 1IW7A 2JA6C 5TMFA 3GTPK 5M3FK 2R7ZK 4YG2A 3S16K 4XLPA 2VUMK 3HOYK 2NVTC 4BY7C 3S17C 1K83C 1Y1WC 3GTLK 5C4XC 3PO2K 3S14C 4A3DC 5IYCC 4A3FK 4C3JC 1R9TK 5C3EC 4A3GC 4A3GK 4A3KC 4A93K 4C3JK 1TWHK 3RZDC 3GTKC 1I50C 3GTMC 4OIQA 5C4XK 5FLMK 1Y1VC 2YU9K 3S17K 1TWGC 5D4DA 4A3IK 4A3IC 1TWGK 3S16C 3GTOK 4A3CK 4BXXK 2JA5C 4KN4A 1I50K 3GTMK 4A3MC 3GTOC 5C4JC 5TMCA 2PA8D 4JK1A 3M3YK 3M4OK 4C3IK 2BE5A 2E2JK 4A3FC 2JA8C 4XLNA 5IYCK 1I3QK 4Y7NK 4OINA 1SMYA 1WCMK 3S1RC 2JA8K 3H0GK 1TWHC 5M5XK 2NVTK 3EQLA 4G7OA 4A3LK 4YFXA 5IYBK 2E2IK 4Q4ZA 3S2DC 4A3DK 1I6VA 3CQZK 2B63K 5M5YK 4QIWD 4BY1C 4A3JC 3H3VD
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HOY C;  3GTG C;  4Y52 K;  2NVX C;  3K7A K;  4KMU A;  4OIO A;  4BBS C;  2PMZ L;  4QJV B;  2JA6 K;  3DXJ A;  2R92 K;  2WB1 D;  3HKZ D;  4LK1 A;  4NOI A;  4A3B C;  4GZY A;  3S2H K;  3S2D K;  3HKZ L;  4X6A C;  4BBR K;  2E2H K;  2NVY K;  1BDF A;  3H0G C;  3S14 K;  3I4N C;  3HOV K;  4LK0 A;  3GTL C;  1I6H C;  4KN7 A;  2Y0S L;  1Y1W K;  4BBS K;  1YNJ A;  4C3I C;  2E2J C;  5FJ8 K;  3RZO K;  5IYD C;  3M4O C;  3PO3 K;  3GTG K;  2A69 A;  4LJZ A;  2R7Z C;  1TWF C;  3FKI C;  2WB1 L;  2PPB A;  5C44 K;  3S1Q K;  2R92 C;  3S15 K;  3PO3 C;  3RZO C;  5IP9 C;  4A3E C;  3GTJ C;  4YFN A;  4AYB L;  2JA7 K;  4A3J K;  3S1R K;  4AYB D;  2Y0S D;  3HOW C;  3S1M K;  2B63 C;  3HOV C;  3I4N K;  4C3H K;  5IP7 K;  4A3L C;  3M3Y C;  1R9T C;  2PA8 L;  4YFK A;  3HOZ C;  4C2M K;  4A3B K;  5M5W K;  2O5I A;  3HOW K;  1I3Q C;  4LLG A;  1TWC K;  4MEY A;  2NVQ C;  2A6E A;  4Y52 C;  2WAQ D;  3S15 C;  5C4J K;  2NVQ K;  3S1Q C;  4XSZ A;  1Y1V K;  4A3M K;  3I4M K;  3HOX K;  3GTQ K;  3GTQ C;  3CQZ C;  3I4M C;  4G7H A;  4BXX C;  4C2M C;  4A3C C;  3HOZ K;  4QIW L;  4A93 C;  4A3K K;  5IYD K;  5C3E K;  1ZYR A;  4C3H C;  5IP7 C;  1I6H K;  5FLM C;  2YU9 C;  1TWA C;  1TWA K;  3RZD K;  1K83 K;  3GTK K;  3GTJ K;  2CW0 A;  2JA7 C;  4BBR C;  2WAQ L;  1HQM A;  2VUM C;  4A3E K;  4X6A K;  2A68 A;  4OIP A;  3HOU C;  3PO2 C;  1XPP A;  2R93 K;  5M3M K;  2JA5 K;  3K7A C;  3S1M C;  5IP9 K;  1SFO K;  4MEX A;  2PMZ D;  1TWC C;  4OIR A;  3WOD A;  3GTP C;  4BY1 K;  2R93 C;  3FKI K;  5C44 C;  1TWF K;  3HOU K;  4G7Z A;  2NVY C;  5IYB C;  2E2I C;  4ZH4 A;  4Q5S A;  1WCM C;  4MQ9 A;  3S1N C;  3H3V L;  3S1N K;  4XSX A;  4Y7N C;  2A6H A;  4BY7 K;  2E2H C;  2NVX K;  4QJV A;  1YNN A;  1SFO C;  2O5J A;  3S2H C;  3HOX C;  1IW7 A;  2JA6 C;  5TMF A;  3GTP K;  5M3F K;  2R7Z K;  4YG2 A;  3S16 K;  4XLP A;  2VUM K;  3HOY K;  2NVT C;  4BY7 C;  3S17 C;  1K83 C;  1Y1W C;  3GTL K;  5C4X C;  3PO2 K;  3S14 C;  4A3D C;  5IYC C;  4A3F K;  4C3J C;  1R9T K;  5C3E C;  4A3G C;  4A3G K;  4A3K C;  4A93 K;  4C3J K;  1TWH K;  3RZD C;  3GTK C;  1I50 C;  3GTM C;  4OIQ A;  5C4X K;  5FLM K;  1Y1V C;  2YU9 K;  3S17 K;  1TWG C;  5D4D A;  4A3I K;  4A3I C;  1TWG K;  3S16 C;  3GTO K;  4A3C K;  4BXX K;  2JA5 C;  4KN4 A;  1I50 K;  3GTM K;  4A3M C;  3GTO C;  5C4J C;  5TMC A;  2PA8 D;  4JK1 A;  3M3Y K;  3M4O K;  4C3I K;  2BE5 A;  2E2J K;  4A3F C;  2JA8 C;  4XLN A;  5IYC K;  1I3Q K;  4Y7N K;  4OIN A;  1SMY A;  1WCM K;  3S1R C;  2JA8 K;  3H0G K;  1TWH C;  5M5X K;  2NVT K;  3EQL A;  4G7O A;  4A3L K;  4YFX A;  5IYB K;  2E2I K;  4Q4Z A;  3S2D C;  4A3D K;  1I6V A;  3CQZ K;  2B63 K;  5M5Y K;  4QIW D;  4BY1 C;  4A3J C;  3H3V D; 
#chains in the Genus database with same CATH topology
 3HOY C;  1F9N A;  5L46 A;  4OIO A;  3HKZ D;  4LK1 A;  5IOQ A;  4A3B C;  3HKZ L;  1BDF A;  1K83 A;  3S14 K;  3I4N C;  1TWH A;  3LYW A;  4IOC S;  4BKW A;  5FJ8 K;  3RZO K;  3PO3 K;  3GTG K;  4DDQ A;  4LJZ A;  2XCR B;  2ZJP S;  2PPB A;  3TTG A;  3S0X A;  2R92 C;  3S1R K;  1JOE A;  4KMA A;  4GFQ A;  4LOW A;  4XCH A;  5IP7 K;  1WSV A;  2PHC B;  2JA7 A;  3M3Y C;  1ISE A;  5M5W K;  2NVX A;  2GAG C;  1EH1 A;  2Y3P A;  3S15 C;  1BGW A;  2L3U A;  5C4J K;  2NVQ K;  5IOT A;  3I4M K;  3GTQ K;  2VUM A;  2R93 A;  4A3K K;  4AH6 A;  4WIL A;  4C3H C;  5IOS A;  3AH5 A;  1TWA C;  3GTK K;  2WAQ L;  4BBR C;  1XZP B;  1XZP A;  3HOU C;  5HL8 A;  2JA5 K;  2V6U A;  1IS1 A;  5JVH S;  1WQF A;  2R93 C;  1IL2 A;  1TWF K;  2NVY C;  4ZH4 A;  4G0V A;  4P5B A;  1B4A A;  3H3V L;  1JVI A;  2A6H A;  2NVX K;  1YNN A;  3SZZ A;  2ZJR S;  4XLP A;  3HOY K;  2NVT C;  1Y1W C;  3TFI A;  5C4X C;  3LAP A;  2V6T A;  4C3J C;  5C3E C;  1IQ0 A;  4A3K C;  4A93 K;  4P5A A;  2RH6 A;  1I50 C;  3GTM C;  1G51 A;  2R7Z A;  5FLM K;  2YU9 K;  4A3I K;  3TFJ A;  1WSR A;  4A3C K;  3BP3 A;  4KN4 A;  1L0W A;  2PA8 D;  3ADA C;  5HQH A;  3A8K A;  1J98 A;  4LR2 A;  4J3N A;  2BE5 A;  1VLO A;  5IYC K;  4U67 S;  4XLN A;  1SMY A;  1WCM K;  3S1R C;  2JA8 K;  1PJ6 A;  4A3L K;  1O29 A;  3S2D C;  2P8T A;  3G4A A;  3H3V D;  4Y52 K;  4KMU A;  3AD7 C;  4QJV B;  2R92 K;  4G0W A;  3L4J A;  2JA6 K;  3S2D K;  4X6A C;  2FQT A;  2NVY K;  4KB2 A;  2E2H K;  1DD5 A;  3GSI A;  2E2J C;  3T01 A;  3LAJ A;  5IYD C;  3M4O C;  2YU9 A;  1IE0 A;  4KMD A;  2R7Z C;  1I50 A;  5C44 K;  3FKI C;  1TWC A;  3GTM A;  4WCE S;  1VH2 A;  4BLB A;  3GTL A;  4AYB L;  4A3E C;  4YFN A;  3SZY A;  5JVO A;  4AYB D;  3I4N K;  4C3H K;  2EBB A;  4GTF A;  1IBA A;  4GTA A;  4YFK A;  3HOZ C;  5E68 A;  4C2M K;  1J6X A;  4KM8 A;  3HOW K;  1I3Q C;  1TWC K;  4ILD A;  1X31 C;  2B63 A;  3AQO A;  3JST A;  4XSZ A;  4GTL A;  4PAB A;  4A3M K;  3HOX K;  1XZQ B;  4G7H A;  4A3C C;  4C2M C;  1O24 A;  5TJ3 A;  3FOF A;  4QIW L;  3HOZ K;  2NVY A;  1KQ4 A;  3A8J A;  3AD8 C;  5EGH A;  3RZD K;  4GTC A;  3GTJ K;  2CW0 A;  4A3E K;  2VUM C;  4X6A K;  3H0G A;  5HL7 S;  3V4G A;  5M3M K;  1VJE A;  3K7A C;  3S1M C;  1B4B A;  3OEP A;  4MEX A;  5IP9 K;  2PMZ D;  1SFO K;  3GTK A;  3N3Y A;  1TWC C;  4BY1 K;  3GTP C;  1EQR A;  3FKI K;  3MML B;  3S1N K;  4QJV A;  2CFA B;  1ZVU A;  3L4K A;  3FOE A;  4WFA S;  2R7Z K;  5M3F K;  5CHP A;  1K83 C;  1TWG A;  3PO2 K;  3S14 C;  5IYC C;  1R9T K;  1WOR A;  4C3J K;  2E2H A;  5JVG S;  1USO A;  1HI9 A;  3TFH A;  2JH3 A;  3IPJ A;  3GTO K;  4BXX K;  3G4C A;  4A3M C;  2KPU A;  4IOA S;  5TMC A;  3M3Y K;  2XCQ A;  4OIN A;  1RU0 A;  4BLA A;  1TWH C;  3GTO A;  3GEI A;  4A3D K;  1WCM A;  3CQZ K;  5M5Y K;  3GIR A;  3I4M C;  4A3J C;  1C0A A;  1ZXO A;  4IO9 S;  1JQW A;  4WFB S;  3K7A K;  2PMZ L;  3DXJ A;  3S2H K;  1USM A;  3GEE A;  4PAA A;  4BBR K;  3CQZ A;  2KWA A;  3H0G C;  1DCP A;  3HOV K;  3GTL C;  4KN7 A;  1YNJ A;  2GSU A;  2RGR A;  1AB4 A;  1TWA A;  4WFN S;  1GE9 A;  2A69 A;  2WB1 L;  1TWF C;  3BP8 C;  1EFW A;  3PO3 C;  3RZO C;  4C45 A;  5IP9 C;  1O28 A;  2JA7 K;  3S1M K;  1WIH A;  4A3J K;  2Y0S D;  2B63 C;  2CFA A;  3FKI A;  1V5V A;  4A3L C;  1R9T C;  4O2D A;  5EGE A;  1O25 A;  4A3B K;  1FEU A;  4G0U A;  4KAT A;  2KXY A;  2W7V A;  2A6E A;  4Y52 C;  3S1Q C;  1Y1V K;  3Q3Q A;  3CQZ C;  2ZUF A;  4BXX C;  1VGX A;  4A93 C;  1I3Q A;  3CAG A;  5C3E K;  2KQ1 A;  1I6H K;  5FLM C;  2YU9 C;  1K83 K;  3A8I A;  5DM7 S;  2JA7 C;  1INN A;  1HQM A;  1Y1W A;  4WF9 S;  4OIP A;  2R93 K;  1WQH A;  1XPP A;  3N0B A;  3AQP A;  1WOO A;  4RMF A;  4OIR A;  3WOD A;  3HOU K;  1SFO A;  5IYB C;  4KAR A;  4P9S A;  3VA7 A;  1VRQ C;  3S1N C;  1Y1V A;  3GTP A;  1R9T A;  1SFO C;  2O5J A;  1XXC A;  3T02 A;  3HXA A;  3HOX C;  1O26 A;  2JA6 C;  5TMF A;  1ZQ1 C;  1F7U A;  2FQO A;  3GTP K;  3S17 C;  3ERE D;  1F7V A;  2JA6 A;  4A3G K;  1TWH K;  3PIO S;  3GTK C;  5C4X K;  3S17 K;  1TWG C;  1O2F B;  1BJT A;  3S16 C;  1WOP A;  2V6S A;  2JA5 C;  5JFE A;  2ZFZ A;  1I50 K;  1F93 A;  3GTM K;  1EK8 A;  1XZQ A;  3GTO C;  4KAW X;  5C4J C;  3M4O K;  4C3I K;  2E2J K;  4A3F C;  4M1X A;  4Y7N K;  1I3Q K;  5DM6 S;  4KDD A;  3NUH A;  3H0G K;  5M5X K;  2NVT K;  3EQL A;  4YFX A;  5IYB K;  3ORE A;  1O27 A;  4QIW D;  4BY1 C;  3QX3 A;  3GTG C;  1DCH A;  2NVX C;  4KB4 A;  4BBS C;  5IOR A;  1XXB A;  2WB1 D;  4NOI A;  4GZY A;  1O2A A;  1ZBS A;  4LK0 A;  1Y1W K;  1I6H C;  2Y0S L;  1J6V A;  4BBS K;  4C3I C;  1WOS A;  4GT9 A;  3S1Q K;  3S15 K;  3PIP S;  3GTJ C;  4FZB A;  1O2B A;  4KC6 A;  3HOW C;  3HOV C;  2PA8 L;  3GTG A;  2O5I A;  4LLG A;  4MEY A;  2NVQ C;  2WAQ D;  3GTQ C;  2R92 A;  2XCO A;  5IYD K;  1PJ7 A;  1ZYR A;  5IP7 C;  1TWA K;  1EI6 A;  4WJ4 A;  3GTQ A;  2A68 A;  3PO2 C;  4KMH A;  3GTJ A;  3FHZ A;  1BS2 A;  4WJ3 M;  3BUE A;  5C44 C;  4G7Z A;  3DLL S;  2E2I C;  2JA5 A;  4Q5S A;  1WCM C;  4MQ9 A;  2ZJQ S;  4KAS A;  2ZUE A;  4XSX A;  4Y7N C;  4GTD A;  2L5N A;  4BY7 K;  2E2H C;  1DCO A;  2P5M A;  3S2H C;  3LPX A;  1IW7 A;  3CF5 S;  3S16 K;  4YG2 A;  1UV7 A;  3OPF A;  2VUM K;  1J6W A;  4BY7 C;  3GTL K;  3N0C A;  4A3D C;  4A3F K;  4A3G C;  3GEH A;  3RZD C;  2GSO A;  4OIQ A;  1Y1V C;  4LQY A;  4FM9 A;  5D4D A;  2GAH C;  4A3I C;  1TWG K;  2E2I A;  4GTB A;  2GSN A;  2D6F C;  1YX2 A;  1WQG A;  4KM9 A;  4JK1 A;  1PJ5 A;  1TWF A;  3GDZ A;  3T00 A;  2JA8 C;  3AD9 C;  4GTE A;  4G7O A;  2E2I K;  4Q4Z A;  1XXA A;  1I6V A;  1YCL A;  5CJ9 A;  2B63 K; 
#chains in the Genus database with same CATH homology
 3HOY C;  3GTG C;  4Y52 K;  2NVX C;  3K7A K;  4KMU A;  4OIO A;  4BBS C;  2PMZ L;  4QJV B;  2JA6 K;  3DXJ A;  2R92 K;  2WB1 D;  3HKZ D;  4LK1 A;  4NOI A;  4A3B C;  4GZY A;  3S2H K;  3S2D K;  3HKZ L;  4X6A C;  4BBR K;  2E2H K;  2NVY K;  1BDF A;  3H0G C;  3S14 K;  3I4N C;  3HOV K;  4LK0 A;  3GTL C;  1I6H C;  4KN7 A;  2Y0S L;  1Y1W K;  4BBS K;  1YNJ A;  4C3I C;  2E2J C;  5FJ8 K;  3RZO K;  5IYD C;  3M4O C;  3PO3 K;  3GTG K;  2A69 A;  4LJZ A;  2R7Z C;  1TWF C;  3FKI C;  2WB1 L;  2PPB A;  5C44 K;  3S1Q K;  2R92 C;  3S15 K;  3PO3 C;  3RZO C;  5IP9 C;  4A3E C;  3GTJ C;  4YFN A;  4AYB L;  2JA7 K;  4A3J K;  3S1R K;  4AYB D;  2Y0S D;  3HOW C;  3S1M K;  2B63 C;  3HOV C;  3I4N K;  4C3H K;  5IP7 K;  4A3L C;  3M3Y C;  1R9T C;  2PA8 L;  4YFK A;  3HOZ C;  4C2M K;  4A3B K;  5M5W K;  2O5I A;  3HOW K;  1I3Q C;  4LLG A;  1TWC K;  4MEY A;  2NVQ C;  2A6E A;  4Y52 C;  2WAQ D;  3S15 C;  5C4J K;  2NVQ K;  3S1Q C;  4XSZ A;  1Y1V K;  4A3M K;  3I4M K;  3HOX K;  3GTQ K;  3GTQ C;  3CQZ C;  3I4M C;  4G7H A;  4BXX C;  4C2M C;  4A3C C;  3HOZ K;  4QIW L;  4A93 C;  4A3K K;  5IYD K;  5C3E K;  1ZYR A;  4C3H C;  5IP7 C;  1I6H K;  5FLM C;  2YU9 C;  1TWA C;  1TWA K;  3RZD K;  1K83 K;  3GTK K;  3GTJ K;  2CW0 A;  2JA7 C;  4BBR C;  2WAQ L;  1HQM A;  2VUM C;  4A3E K;  4X6A K;  2A68 A;  4OIP A;  3HOU C;  3PO2 C;  1XPP A;  2R93 K;  5M3M K;  2JA5 K;  3K7A C;  3S1M C;  5IP9 K;  1SFO K;  4MEX A;  2PMZ D;  1TWC C;  4OIR A;  3WOD A;  3GTP C;  4BY1 K;  2R93 C;  3FKI K;  5C44 C;  1TWF K;  3HOU K;  4G7Z A;  2NVY C;  5IYB C;  2E2I C;  4ZH4 A;  4Q5S A;  1WCM C;  4MQ9 A;  3S1N C;  3H3V L;  3S1N K;  4XSX A;  4Y7N C;  2A6H A;  4BY7 K;  2E2H C;  2NVX K;  4QJV A;  1YNN A;  1SFO C;  2O5J A;  3S2H C;  3HOX C;  1IW7 A;  2JA6 C;  5TMF A;  3GTP K;  5M3F K;  2R7Z K;  4YG2 A;  3S16 K;  4XLP A;  2VUM K;  3HOY K;  2NVT C;  4BY7 C;  3S17 C;  1K83 C;  1Y1W C;  3GTL K;  5C4X C;  3PO2 K;  3S14 C;  4A3D C;  5IYC C;  4A3F K;  4C3J C;  1R9T K;  5C3E C;  4A3G C;  4A3G K;  4A3K C;  4A93 K;  4C3J K;  1TWH K;  3RZD C;  3GTK C;  1I50 C;  3GTM C;  4OIQ A;  5C4X K;  5FLM K;  1Y1V C;  2YU9 K;  3S17 K;  1TWG C;  5D4D A;  4A3I K;  4A3I C;  1TWG K;  3S16 C;  3GTO K;  4A3C K;  4BXX K;  2JA5 C;  4KN4 A;  1I50 K;  3GTM K;  4A3M C;  3GTO C;  5C4J C;  5TMC A;  2PA8 D;  4JK1 A;  3M3Y K;  3M4O K;  4C3I K;  2BE5 A;  2E2J K;  4A3F C;  2JA8 C;  4XLN A;  5IYC K;  1I3Q K;  4Y7N K;  4OIN A;  1SMY A;  1WCM K;  3S1R C;  2JA8 K;  3H0G K;  1TWH C;  5M5X K;  2NVT K;  3EQL A;  4G7O A;  4A3L K;  4YFX A;  5IYB K;  2E2I K;  4Q4Z A;  3S2D C;  4A3D K;  1I6V A;  3CQZ K;  2B63 K;  5M5Y K;  4QIW D;  4BY1 C;  4A3J C;  3H3V D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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