3S1QC

Rna polymerase ii initiation complex with a 5-nt 3'-deoxy rna soaked with atp
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1qC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1qC01
2NVTK 2NVTC 2O5JA 3GTMC 3GTMK 4OIQA 3PO2K 3PO2C 4MEYA 5C4XK 4GZYA 5M5WK 2BE5A 4OIPA 2E2HK 2E2HC 4KMUA 3RZDC 3CQZC 4LK1A 2JA6C 3CQZK 4ZH4A 3GTGC 4G7OA 4A3GC 3GTGK 4YG2A 2NVXC 3S14C 2NVXK 3S14K 2YU9K 2YU9C 2E2IK 2E2IC 3PO3K 4X6AK 3HOUK 2CW0A 3HOUC 3S17C 3S1NC 3RZDK 1Y1WK 3S17K 3S1NK 2PMZD 3M3YK 3M3YC 4A3JK 4A3JC 2PMZL 5IYDK 2JA7K 2JA7C 5IP7C 4C3JC 3GTKC 4C3JK 5IP7K 3GTKK 2PA8D 5FLMK 5FLMC 3S2DK 4KN4A 3S2HC 3S2DC 3S2HK 2PA8L 1BDFA 4XLNA 2B63C 3GTQC 2B63K 3GTQK 5C44K 5C44C 1WCMK 1WCMC 3I4MK 1HQMA 3I4MC 1TWGK 1TWGC 1I50C 2A6EA 1I50K 5IYBK 5IYBC 4A3CK 4A3CC 5C4XC 4XSXA 3HOVK 3HOVC 2NVYK 2O5IA 3RZOK 3S1QK 1R9TK 5IYCK 5IYCC 5TMCA 1SFOC 1TWHK 1TWHC 5C4JK 5C4JC 1SFOK 4A3KK 4A3KC 3PO3C 3K7AK 3K7AC 4C3HC 4X6AC 4C3HK 1K83K 1Y1WC 5C3EK 5C3EC 5FJ8K 4A3MK 4A3MC 4MQ9A 4MEXA 5IYDC 1I6VA 4LJZA 4A3BK 4A3BC 3GTJK 3GTJC 2PPBA 3HOYC 4C2MK 4C2MC 4QJVB 5D4DA 3HOYK 4XSZA 5M5YK 5TMFA 4LLGA 1XPPA 4BBRC 4BBRK 3GTOK 3GTOC 3HOZK 3HOZC 1Y1VK 1Y1VC 1TWCK 1TWCC 2JA6K 3HOXK 1TWAK 1TWAC 3S1MK 3S1MC 4KN7A 4QIWD 1ZYRA 2R7ZK 2R7ZC 4A3LC 3H0GK 3H0GC 4A3LK 4QIWL 2NVYC 3EQLA 4A3EC 4YFXA 4A3EK 1IW7A 4A3FC 4A93C 4A3FK 2WB1D 5M5XK 4A93K 4OINA 4C3IK 2Y0SD 4C3IC 4BXXC 4BXXK 4Q4ZA 2WB1L 2Y0SL 4LK0A 4AYBD 1I6HK 1I6HC 2JA8C 2JA8K 1TWFK 1TWFC 1K83C 4AYBL 1YNJA 2JA5C 5M3MK 2JA5K 3S16K 3S16C 4BY1K 4BY1C 2R93K 3HOWK 3HOWC 4Q5SA 4G7ZA 1I3QK 1I3QC 3S1RK 3S1RC 3GTPC 4BY7C 3H3VD 3GTPK 3M4OC 3M4OK 4OIRA 4BY7K 3H3VL 4NOIA 2WAQD 4QJVA 4YFKA 4Y7NK 4Y7NC 3GTLK 3GTLC 2E2JC 2E2JK 2WAQL 2R92K 2R92C 3I4NC 1SMYA 5M3FK 3I4NK 3WODA 4G7HA 3RZOC 2A6HA 4JK1A 4OIOA 3HOXC 5IP9C 1R9TC 3S1QC 2A68A 2R93C 5IP9K 4XLPA 4A3DC 3HKZD 4A3DK 4A3GK 3DXJA 3HKZL 1YNNA 2VUMC 2VUMK 4BBSK 4YFNA 4A3IC 4BBSC 3S15C 4A3IK 2NVQC 3FKIK 3FKIC 2NVQK 2A69A 3S15K 4Y52K 4Y52C
chains in the Genus database with same CATH superfamily
1JQWA 2NVTK 2NVTC 1DCPA 2P8TA 3PO2K 3PO2C 5DM7S 4AH6A 2KQ1A 1DD5A 4WJ3M 1YCLA 1VJEA 2E2HK 2E2HC 1WQGA 3RZDK 3RZDC 2JA6C 4LK1A 2JA6K 3GTGK 3GTGC 5CJ9A 2NVXK 2NVXC 2XCRB 1F7VA 3LAPA 3A8KA 5HQHA 4WILA 2PMZD 5L46A 2D6FC 3CQZA 4C3JK 4C3JC 3IPJA 3LPXA 1EFWA 2E2IA 3OREA 1KQ4A 5IORA 2PA8L 1XZQA 4XLNA 1VGXA 1WQFA 1XZPA 4GTFA 5IYBK 5IYBC 3GTMA 2B63A 1WCMA 1O2FB 4O2DA 1J6WA 2CFAB 4U67S 3MMLB 4GT9A 4X6AC 2FQTA 1ISEA 1K83K 1WOSA 2V6SA 4RMFA 1Y1WC 5FJ8K 1BS2A 1EQRA 2P5MA 4A3BC 1X31C 3GSIA 4A3BK 4C2MK 4C2MC 4LLGA 1XPPA 4BBRC 4BBRK 4LQYA 3GTKA 4LR2A 3A8JA 4KN7A 1HI9A 4ILDA 3TFHA 3GTQA 3CAGA 2GAGC 3ADAC 4OINA 2RH6A 3GEIA 2NVYA 1XZQB 5M3MK 2JA5C 2JA5K 1SFOA 3GEEA 1BJTA 1XXAA 3HOWC 3HOWK 4G7ZA 3S1RK 3S1RC 3H3VD 1JVIA 3ERED 1AB4A 4WFAS 4Y7NK 4Y7NC 5HL7S 2R92K 2R92C 5M3FK 4A3GK 4A3GC 4G7HA 3HOXK 3HOXC 3GTOA 1F9NA 1TWAA 3DXJA 2VUMK 2VUMC 3H0GA 1O25A 3S15K 3S15C 1WQHA 4Y52K 4Y52C 1VRQC 1C0AA 3FHZA 1ZBSA 2GSUA 3BUEA 3S0XA 5C4XK 5IOTA 2ZUFA 4OIPA 4KMUA 4PAAA 1O27A 4ZH4A 4G7OA 3S14K 3S14C 1VH2A 2PHCB 3HOUK 2CW0A 3HOUC 3QX3A 2E2HA 1DCOA 2JA6A 1EK8A 3GTGA 2XCOA 2JA7K 2JA7C 5IP7C 5IP7K 4KB2A 4KARA 4FZBA 1O28A 1B4BA 1BDFA 1IS1A 5CHPA 3FKIA 4KMAA 3I4MK 3I4MC 1TWGK 1TWGC 3G4CA 3AD7C 3N0CA 3AD9C 3HOVK 3HOVC 5IYCK 5IYCC 1TWHK 1TWHC 4XCHA 3T02A 3N0BA 4C3HC 1ZQ1C 4C3HK 1F93A 5C3EK 5C3EC 5JFEA 5TJ3A 1B4AA 4WCES 1IBAA 2YU9A 3GTJK 3GTJC 1Y1WA 4QJVB 1WIHA 4XSZA 2RGRA 1Y1VK 1Y1VC 3BP3A 4QIWD 5JVGS 2R7ZC 4A3LC 2JH3A 2R7ZK 4A3LK 3EQLA 4YFXA 1XXCA 2WB1D 3JSTA 2Y0SD 2FQOA 4LK0A 4AYBD 1J6VA 1I6HC 1I6HK 1TWFK 1TWFC 1K83C 1YNJA 4P5BA 2XCQA 3T01A 4BY1K 4BY1C 1IE0A 3M4OK 3M4OC 1RU0A 4KMDA 4G0WA 2E2JK 2E2JC 2WAQL 3WODA 2L3UA 4JK1A 2R93K 2R93C 4KM9A 1TWCA 3OEPA 4P5AA 2EBBA 3HKZL 3TTGA 1WORA 1YNNA 4GTDA 3N3YA 4BBSK 4BBSC 2NVQK 2NVQC 2KWAA 3T00A 1XZPB 3NUHA 3GTMC 3GTMK 2VUMA 2L5NA 3A8IA 3LYWA 4GTAA 4BKWA 3TFIA 4GZYA 1J98A 1O24A 2BE5A 1J6XA 5M5WK 4KC6A 5EGEA 4PABA 1I3QA 3GTPA 3L4KA 1O26A 1PJ6A 3PO3K 2KXYA 3S1NK 3S1NC 3VA7A 1R9TA 5IYDK 2PMZL 3GTKK 3GTKC 2PA8D 3AH5A 4KN4A 1YX2A 4KDDA 2V6TA 1L0WA 3GTQK 3GTQC 4LOWA 5C44K 5C44C 5EGHA 4J3NA 1I50K 1I50C 2A6EA 4A3CK 4A3CC 5C4XC 1WOPA 3OPFA 1FEUA 2O5IA 2NVYK 1USOA 4WJ4A 5DM6S 1SFOC 1SFOK 5C4JK 5C4JC 4P9SA 1UV7A 2Y3PA 4KB4A 4GTLA 4A3MK 4A3MC 2NVXA 3PIOS 1DCHA 4KASA 4G0UA 1G51A 1WSRA 5M5YK 5TMFA 4M1XA 3GTOK 3GTOC 3HOZK 3HOZC 1TWAK 1TWAC 3Q3QA 2ZJPS 3GTJA 3BP8C 1ZYRA 3H0GK 3H0GC 3FOFA 1Y1VA 2ZJQS 4A3EC 4A3EK 4A93K 4A93C 4GTCA 4C45A 3LAJA 1EI6A 4Q4ZA 4WFNS 5JVHS 2CFAA 2GSNA 3S16K 3S16C 4Q5SA 2W7VA 1EH1A 1TWFA 1K83A 2KPUA 3GEHA 4OIRA 3L4JA 3H3VL 4GTEA 4NOIA 3GTLK 3GTLC 2GAHC 3PIPS 1SMYA 4FM9A 3GIRA 3TFJA 2A6HA 5HL8A 4A3DK 4A3DC 5IOSA 3SZZA 5JVOA 1ZVUA 1IQ0A 4A3IK 4A3IC 2R93A 3FKIK 3FKIC 1WSVA 4DDQA 4KM8A 2O5JA 1PJ7A 4OIQA 4GFQA 4MEYA 2JA5A 2ZFZA 3AQPA 1PJ5A 3DLLS 3HXAA 3G4AA 3CQZK 3CQZC 4YG2A 4X6AK 2YU9K 2YU9C 2E2IK 2E2IC 1F7UA 3S17K 3S17C 1Y1WK 2R92A 3M3YK 3M3YC 4A3JK 4A3JC 3FOEA 4KATA 5FLMK 5FLMC 4KMHA 3S2DK 3S2DC 3S2HC 3S2HK 2B63K 2B63C 1WCMK 1WCMC 4WF9S 2GSOA 1HQMA 4XSXA 1XXBA 5TMCA 1I50A 4A3KK 4A3KC 1INNA 3PO3C 3K7AK 3K7AC 1USMA 4WFBS 1GE9A 3SZYA 4MQ9A 4MEXA 5IYDC 1I6VA 4LJZA 4IOAS 3HOYK 3HOYC 2PPBA 5D4DA 1TWCK 1TWCC 2JA7A 4IOCS 3S1MK 3S1MC 1ZXOA 2V6UA 3GDZA 4QIWL 2NVYC 1O2AA 1JOEA 4A3FK 1IW7A 4A3FC 5M5XK 1TWGA 4C3IC 4C3IK 4BXXC 4BXXK 2ZJRS 2WB1L 5IOQA 2Y0SL 4BLBA 2JA8K 2JA8C 1O2BA 4IO9S 3AD8C 4AYBL 4G0VA 1IL2A 1TWHA 4GTBA 4BLAA 3V4GA 1I3QK 1I3QC 3GTPK 3GTPC 4BY7C 4KAWX 4BY7K 3CF5S 1V5VA 5E68A 1WOOA 2WAQD 4QJVA 4YFKA 3AQOA 3I4NK 3I4NC 3RZOK 3S1QC 3RZOC 1R9TC 1R9TK 4OIOA 5IP9K 5IP9C 2ZUEA 3S1QK 2A68A 4XLPA 3HKZD 1O29A 3GTLA 1BGWA 2R7ZA 4YFNA 2A69A 1VLOA
chains in the Genus database with same CATH topology
2NVTK 2NVTC 2O5JA 3GTMC 3GTMK 4OIQA 3PO2K 3PO2C 4MEYA 5C4XK 4GZYA 5M5WK 2BE5A 4OIPA 2E2HK 2E2HC 4KMUA 3RZDC 3CQZC 4LK1A 2JA6C 3CQZK 4ZH4A 3GTGC 4G7OA 4A3GC 3GTGK 4YG2A 2NVXC 3S14C 2NVXK 3S14K 2YU9K 2YU9C 2E2IK 2E2IC 3PO3K 4X6AK 3HOUK 2CW0A 3HOUC 3S17C 3S1NC 3RZDK 1Y1WK 3S17K 3S1NK 2PMZD 3M3YK 3M3YC 4A3JK 4A3JC 2PMZL 5IYDK 2JA7K 2JA7C 5IP7C 4C3JC 3GTKC 4C3JK 5IP7K 3GTKK 2PA8D 5FLMK 5FLMC 3S2DK 4KN4A 3S2HC 3S2DC 3S2HK 2PA8L 1BDFA 4XLNA 2B63C 3GTQC 2B63K 3GTQK 5C44K 5C44C 1WCMK 1WCMC 3I4MK 1HQMA 3I4MC 1TWGK 1TWGC 1I50C 2A6EA 1I50K 5IYBK 5IYBC 4A3CK 4A3CC 5C4XC 4XSXA 3HOVK 3HOVC 2NVYK 2O5IA 3RZOK 3S1QK 1R9TK 5IYCK 5IYCC 5TMCA 1SFOC 1TWHK 1TWHC 5C4JK 5C4JC 1SFOK 4A3KK 4A3KC 3PO3C 3K7AK 3K7AC 4C3HC 4X6AC 4C3HK 1K83K 1Y1WC 5C3EK 5C3EC 5FJ8K 4A3MK 4A3MC 4MQ9A 4MEXA 5IYDC 1I6VA 4LJZA 4A3BK 4A3BC 3GTJK 3GTJC 2PPBA 3HOYC 4C2MK 4C2MC 4QJVB 5D4DA 3HOYK 4XSZA 5M5YK 5TMFA 4LLGA 1XPPA 4BBRC 4BBRK 3GTOK 3GTOC 3HOZK 3HOZC 1Y1VK 1Y1VC 1TWCK 1TWCC 2JA6K 3HOXK 1TWAK 1TWAC 3S1MK 3S1MC 4KN7A 4QIWD 1ZYRA 2R7ZK 2R7ZC 4A3LC 3H0GK 3H0GC 4A3LK 4QIWL 2NVYC 3EQLA 4A3EC 4YFXA 4A3EK 1IW7A 4A3FC 4A93C 4A3FK 2WB1D 5M5XK 4A93K 4OINA 4C3IK 2Y0SD 4C3IC 4BXXC 4BXXK 4Q4ZA 2WB1L 2Y0SL 4LK0A 4AYBD 1I6HK 1I6HC 2JA8C 2JA8K 1TWFK 1TWFC 1K83C 4AYBL 1YNJA 2JA5C 5M3MK 2JA5K 3S16K 3S16C 4BY1K 4BY1C 2R93K 3HOWK 3HOWC 4Q5SA 4G7ZA 1I3QK 1I3QC 3S1RK 3S1RC 3GTPC 4BY7C 3H3VD 3GTPK 3M4OC 3M4OK 4OIRA 4BY7K 3H3VL 4NOIA 2WAQD 4QJVA 4YFKA 4Y7NK 4Y7NC 3GTLK 3GTLC 2E2JC 2E2JK 2WAQL 2R92K 2R92C 3I4NC 1SMYA 5M3FK 3I4NK 3WODA 4G7HA 3RZOC 2A6HA 4JK1A 4OIOA 3HOXC 5IP9C 1R9TC 3S1QC 2A68A 2R93C 5IP9K 4XLPA 4A3DC 3HKZD 4A3DK 4A3GK 3DXJA 3HKZL 1YNNA 2VUMC 2VUMK 4BBSK 4YFNA 4A3IC 4BBSC 3S15C 4A3IK 2NVQC 3FKIK 3FKIC 2NVQK 2A69A 3S15K 4Y52K 4Y52C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2NVT K;  2NVT C;  2O5J A;  3GTM C;  3GTM K;  4OIQ A;  3PO2 K;  3PO2 C;  4MEY A;  5C4X K;  4GZY A;  5M5W K;  2BE5 A;  4OIP A;  2E2H K;  2E2H C;  4KMU A;  3RZD C;  3CQZ C;  4LK1 A;  2JA6 C;  3CQZ K;  4ZH4 A;  3GTG C;  4G7O A;  4A3G C;  3GTG K;  4YG2 A;  2NVX C;  3S14 C;  2NVX K;  3S14 K;  2YU9 K;  2YU9 C;  2E2I K;  2E2I C;  3PO3 K;  4X6A K;  3HOU K;  2CW0 A;  3HOU C;  3S17 C;  3S1N C;  3RZD K;  1Y1W K;  3S17 K;  3S1N K;  2PMZ D;  3M3Y K;  3M3Y C;  4A3J K;  4A3J C;  2PMZ L;  5IYD K;  2JA7 K;  2JA7 C;  5IP7 C;  4C3J C;  3GTK C;  4C3J K;  5IP7 K;  3GTK K;  2PA8 D;  5FLM K;  5FLM C;  3S2D K;  4KN4 A;  3S2H C;  3S2D C;  3S2H K;  2PA8 L;  1BDF A;  4XLN A;  2B63 C;  3GTQ C;  2B63 K;  3GTQ K;  5C44 K;  5C44 C;  1WCM K;  1WCM C;  3I4M K;  1HQM A;  3I4M C;  1TWG K;  1TWG C;  1I50 C;  2A6E A;  1I50 K;  5IYB K;  5IYB C;  4A3C K;  4A3C C;  5C4X C;  4XSX A;  3HOV K;  3HOV C;  2NVY K;  2O5I A;  3RZO K;  3S1Q K;  1R9T K;  5IYC K;  5IYC C;  5TMC A;  1SFO C;  1TWH K;  1TWH C;  5C4J K;  5C4J C;  1SFO K;  4A3K K;  4A3K C;  3PO3 C;  3K7A K;  3K7A C;  4C3H C;  4X6A C;  4C3H K;  1K83 K;  1Y1W C;  5C3E K;  5C3E C;  5FJ8 K;  4A3M K;  4A3M C;  4MQ9 A;  4MEX A;  5IYD C;  1I6V A;  4LJZ A;  4A3B K;  4A3B C;  3GTJ K;  3GTJ C;  2PPB A;  3HOY C;  4C2M K;  4C2M C;  4QJV B;  5D4D A;  3HOY K;  4XSZ A;  5M5Y K;  5TMF A;  4LLG A;  1XPP A;  4BBR C;  4BBR K;  3GTO K;  3GTO C;  3HOZ K;  3HOZ C;  1Y1V K;  1Y1V C;  1TWC K;  1TWC C;  2JA6 K;  3HOX K;  1TWA K;  1TWA C;  3S1M K;  3S1M C;  4KN7 A;  4QIW D;  1ZYR A;  2R7Z K;  2R7Z C;  4A3L C;  3H0G K;  3H0G C;  4A3L K;  4QIW L;  2NVY C;  3EQL A;  4A3E C;  4YFX A;  4A3E K;  1IW7 A;  4A3F C;  4A93 C;  4A3F K;  2WB1 D;  5M5X K;  4A93 K;  4OIN A;  4C3I K;  2Y0S D;  4C3I C;  4BXX C;  4BXX K;  4Q4Z A;  2WB1 L;  2Y0S L;  4LK0 A;  4AYB D;  1I6H K;  1I6H C;  2JA8 C;  2JA8 K;  1TWF K;  1TWF C;  1K83 C;  4AYB L;  1YNJ A;  2JA5 C;  5M3M K;  2JA5 K;  3S16 K;  3S16 C;  4BY1 K;  4BY1 C;  2R93 K;  3HOW K;  3HOW C;  4Q5S A;  4G7Z A;  1I3Q K;  1I3Q C;  3S1R K;  3S1R C;  3GTP C;  4BY7 C;  3H3V D;  3GTP K;  3M4O C;  3M4O K;  4OIR A;  4BY7 K;  3H3V L;  4NOI A;  2WAQ D;  4QJV A;  4YFK A;  4Y7N K;  4Y7N C;  3GTL K;  3GTL C;  2E2J C;  2E2J K;  2WAQ L;  2R92 K;  2R92 C;  3I4N C;  1SMY A;  5M3F K;  3I4N K;  3WOD A;  4G7H A;  3RZO C;  2A6H A;  4JK1 A;  4OIO A;  3HOX C;  5IP9 C;  1R9T C;  3S1Q C;  2A68 A;  2R93 C;  5IP9 K;  4XLP A;  4A3D C;  3HKZ D;  4A3D K;  4A3G K;  3DXJ A;  3HKZ L;  1YNN A;  2VUM C;  2VUM K;  4BBS K;  4YFN A;  4A3I C;  4BBS C;  3S15 C;  4A3I K;  2NVQ C;  3FKI K;  3FKI C;  2NVQ K;  2A69 A;  3S15 K;  4Y52 K;  4Y52 C; 
#chains in the Genus database with same CATH topology
 1JQW A;  2NVT K;  2NVT C;  1DCP A;  2P8T A;  3PO2 K;  3PO2 C;  5DM7 S;  4AH6 A;  2KQ1 A;  1DD5 A;  4WJ3 M;  1YCL A;  1VJE A;  2E2H K;  2E2H C;  1WQG A;  3RZD K;  3RZD C;  2JA6 C;  4LK1 A;  2JA6 K;  3GTG K;  3GTG C;  5CJ9 A;  2NVX K;  2NVX C;  2XCR B;  1F7V A;  3LAP A;  3A8K A;  5HQH A;  4WIL A;  2PMZ D;  5L46 A;  2D6F C;  3CQZ A;  4C3J K;  4C3J C;  3IPJ A;  3LPX A;  1EFW A;  2E2I A;  3ORE A;  1KQ4 A;  5IOR A;  2PA8 L;  1XZQ A;  4XLN A;  1VGX A;  1WQF A;  1XZP A;  4GTF A;  5IYB K;  5IYB C;  3GTM A;  2B63 A;  1WCM A;  1O2F B;  4O2D A;  1J6W A;  2CFA B;  4U67 S;  3MML B;  4GT9 A;  4X6A C;  2FQT A;  1ISE A;  1K83 K;  1WOS A;  2V6S A;  4RMF A;  1Y1W C;  5FJ8 K;  1BS2 A;  1EQR A;  2P5M A;  4A3B C;  1X31 C;  3GSI A;  4A3B K;  4C2M K;  4C2M C;  4LLG A;  1XPP A;  4BBR C;  4BBR K;  4LQY A;  3GTK A;  4LR2 A;  3A8J A;  4KN7 A;  1HI9 A;  4ILD A;  3TFH A;  3GTQ A;  3CAG A;  2GAG C;  3ADA C;  4OIN A;  2RH6 A;  3GEI A;  2NVY A;  1XZQ B;  5M3M K;  2JA5 C;  2JA5 K;  1SFO A;  3GEE A;  1BJT A;  1XXA A;  3HOW C;  3HOW K;  4G7Z A;  3S1R K;  3S1R C;  3H3V D;  1JVI A;  3ERE D;  1AB4 A;  4WFA S;  4Y7N K;  4Y7N C;  5HL7 S;  2R92 K;  2R92 C;  5M3F K;  4A3G K;  4A3G C;  4G7H A;  3HOX K;  3HOX C;  3GTO A;  1F9N A;  1TWA A;  3DXJ A;  2VUM K;  2VUM C;  3H0G A;  1O25 A;  3S15 K;  3S15 C;  1WQH A;  4Y52 K;  4Y52 C;  1VRQ C;  1C0A A;  3FHZ A;  1ZBS A;  2GSU A;  3BUE A;  3S0X A;  5C4X K;  5IOT A;  2ZUF A;  4OIP A;  4KMU A;  4PAA A;  1O27 A;  4ZH4 A;  4G7O A;  3S14 K;  3S14 C;  1VH2 A;  2PHC B;  3HOU K;  2CW0 A;  3HOU C;  3QX3 A;  2E2H A;  1DCO A;  2JA6 A;  1EK8 A;  3GTG A;  2XCO A;  2JA7 K;  2JA7 C;  5IP7 C;  5IP7 K;  4KB2 A;  4KAR A;  4FZB A;  1O28 A;  1B4B A;  1BDF A;  1IS1 A;  5CHP A;  3FKI A;  4KMA A;  3I4M K;  3I4M C;  1TWG K;  1TWG C;  3G4C A;  3AD7 C;  3N0C A;  3AD9 C;  3HOV K;  3HOV C;  5IYC K;  5IYC C;  1TWH K;  1TWH C;  4XCH A;  3T02 A;  3N0B A;  4C3H C;  1ZQ1 C;  4C3H K;  1F93 A;  5C3E K;  5C3E C;  5JFE A;  5TJ3 A;  1B4A A;  4WCE S;  1IBA A;  2YU9 A;  3GTJ K;  3GTJ C;  1Y1W A;  4QJV B;  1WIH A;  4XSZ A;  2RGR A;  1Y1V K;  1Y1V C;  3BP3 A;  4QIW D;  5JVG S;  2R7Z C;  4A3L C;  2JH3 A;  2R7Z K;  4A3L K;  3EQL A;  4YFX A;  1XXC A;  2WB1 D;  3JST A;  2Y0S D;  2FQO A;  4LK0 A;  4AYB D;  1J6V A;  1I6H C;  1I6H K;  1TWF K;  1TWF C;  1K83 C;  1YNJ A;  4P5B A;  2XCQ A;  3T01 A;  4BY1 K;  4BY1 C;  1IE0 A;  3M4O K;  3M4O C;  1RU0 A;  4KMD A;  4G0W A;  2E2J K;  2E2J C;  2WAQ L;  3WOD A;  2L3U A;  4JK1 A;  2R93 K;  2R93 C;  4KM9 A;  1TWC A;  3OEP A;  4P5A A;  2EBB A;  3HKZ L;  3TTG A;  1WOR A;  1YNN A;  4GTD A;  3N3Y A;  4BBS K;  4BBS C;  2NVQ K;  2NVQ C;  2KWA A;  3T00 A;  1XZP B;  3NUH A;  3GTM C;  3GTM K;  2VUM A;  2L5N A;  3A8I A;  3LYW A;  4GTA A;  4BKW A;  3TFI A;  4GZY A;  1J98 A;  1O24 A;  2BE5 A;  1J6X A;  5M5W K;  4KC6 A;  5EGE A;  4PAB A;  1I3Q A;  3GTP A;  3L4K A;  1O26 A;  1PJ6 A;  3PO3 K;  2KXY A;  3S1N K;  3S1N C;  3VA7 A;  1R9T A;  5IYD K;  2PMZ L;  3GTK K;  3GTK C;  2PA8 D;  3AH5 A;  4KN4 A;  1YX2 A;  4KDD A;  2V6T A;  1L0W A;  3GTQ K;  3GTQ C;  4LOW A;  5C44 K;  5C44 C;  5EGH A;  4J3N A;  1I50 K;  1I50 C;  2A6E A;  4A3C K;  4A3C C;  5C4X C;  1WOP A;  3OPF A;  1FEU A;  2O5I A;  2NVY K;  1USO A;  4WJ4 A;  5DM6 S;  1SFO C;  1SFO K;  5C4J K;  5C4J C;  4P9S A;  1UV7 A;  2Y3P A;  4KB4 A;  4GTL A;  4A3M K;  4A3M C;  2NVX A;  3PIO S;  1DCH A;  4KAS A;  4G0U A;  1G51 A;  1WSR A;  5M5Y K;  5TMF A;  4M1X A;  3GTO K;  3GTO C;  3HOZ K;  3HOZ C;  1TWA K;  1TWA C;  3Q3Q A;  2ZJP S;  3GTJ A;  3BP8 C;  1ZYR A;  3H0G K;  3H0G C;  3FOF A;  1Y1V A;  2ZJQ S;  4A3E C;  4A3E K;  4A93 K;  4A93 C;  4GTC A;  4C45 A;  3LAJ A;  1EI6 A;  4Q4Z A;  4WFN S;  5JVH S;  2CFA A;  2GSN A;  3S16 K;  3S16 C;  4Q5S A;  2W7V A;  1EH1 A;  1TWF A;  1K83 A;  2KPU A;  3GEH A;  4OIR A;  3L4J A;  3H3V L;  4GTE A;  4NOI A;  3GTL K;  3GTL C;  2GAH C;  3PIP S;  1SMY A;  4FM9 A;  3GIR A;  3TFJ A;  2A6H A;  5HL8 A;  4A3D K;  4A3D C;  5IOS A;  3SZZ A;  5JVO A;  1ZVU A;  1IQ0 A;  4A3I K;  4A3I C;  2R93 A;  3FKI K;  3FKI C;  1WSV A;  4DDQ A;  4KM8 A;  2O5J A;  1PJ7 A;  4OIQ A;  4GFQ A;  4MEY A;  2JA5 A;  2ZFZ A;  3AQP A;  1PJ5 A;  3DLL S;  3HXA A;  3G4A A;  3CQZ K;  3CQZ C;  4YG2 A;  4X6A K;  2YU9 K;  2YU9 C;  2E2I K;  2E2I C;  1F7U A;  3S17 K;  3S17 C;  1Y1W K;  2R92 A;  3M3Y K;  3M3Y C;  4A3J K;  4A3J C;  3FOE A;  4KAT A;  5FLM K;  5FLM C;  4KMH A;  3S2D K;  3S2D C;  3S2H C;  3S2H K;  2B63 K;  2B63 C;  1WCM K;  1WCM C;  4WF9 S;  2GSO A;  1HQM A;  4XSX A;  1XXB A;  5TMC A;  1I50 A;  4A3K K;  4A3K C;  1INN A;  3PO3 C;  3K7A K;  3K7A C;  1USM A;  4WFB S;  1GE9 A;  3SZY A;  4MQ9 A;  4MEX A;  5IYD C;  1I6V A;  4LJZ A;  4IOA S;  3HOY K;  3HOY C;  2PPB A;  5D4D A;  1TWC K;  1TWC C;  2JA7 A;  4IOC S;  3S1M K;  3S1M C;  1ZXO A;  2V6U A;  3GDZ A;  4QIW L;  2NVY C;  1O2A A;  1JOE A;  4A3F K;  1IW7 A;  4A3F C;  5M5X K;  1TWG A;  4C3I C;  4C3I K;  4BXX C;  4BXX K;  2ZJR S;  2WB1 L;  5IOQ A;  2Y0S L;  4BLB A;  2JA8 K;  2JA8 C;  1O2B A;  4IO9 S;  3AD8 C;  4AYB L;  4G0V A;  1IL2 A;  1TWH A;  4GTB A;  4BLA A;  3V4G A;  1I3Q K;  1I3Q C;  3GTP K;  3GTP C;  4BY7 C;  4KAW X;  4BY7 K;  3CF5 S;  1V5V A;  5E68 A;  1WOO A;  2WAQ D;  4QJV A;  4YFK A;  3AQO A;  3I4N K;  3I4N C;  3RZO K;  3S1Q C;  3RZO C;  1R9T C;  1R9T K;  4OIO A;  5IP9 K;  5IP9 C;  2ZUE A;  3S1Q K;  2A68 A;  4XLP A;  3HKZ D;  1O29 A;  3GTL A;  1BGW A;  2R7Z A;  4YFN A;  2A69 A;  1VLO A; 
#chains in the Genus database with same CATH homology
 2NVT K;  2NVT C;  2O5J A;  3GTM C;  3GTM K;  4OIQ A;  3PO2 K;  3PO2 C;  4MEY A;  5C4X K;  4GZY A;  5M5W K;  2BE5 A;  4OIP A;  2E2H K;  2E2H C;  4KMU A;  3RZD C;  3CQZ C;  4LK1 A;  2JA6 C;  3CQZ K;  4ZH4 A;  3GTG C;  4G7O A;  4A3G C;  3GTG K;  4YG2 A;  2NVX C;  3S14 C;  2NVX K;  3S14 K;  2YU9 K;  2YU9 C;  2E2I K;  2E2I C;  3PO3 K;  4X6A K;  3HOU K;  2CW0 A;  3HOU C;  3S17 C;  3S1N C;  3RZD K;  1Y1W K;  3S17 K;  3S1N K;  2PMZ D;  3M3Y K;  3M3Y C;  4A3J K;  4A3J C;  2PMZ L;  5IYD K;  2JA7 K;  2JA7 C;  5IP7 C;  4C3J C;  3GTK C;  4C3J K;  5IP7 K;  3GTK K;  2PA8 D;  5FLM K;  5FLM C;  3S2D K;  4KN4 A;  3S2H C;  3S2D C;  3S2H K;  2PA8 L;  1BDF A;  4XLN A;  2B63 C;  3GTQ C;  2B63 K;  3GTQ K;  5C44 K;  5C44 C;  1WCM K;  1WCM C;  3I4M K;  1HQM A;  3I4M C;  1TWG K;  1TWG C;  1I50 C;  2A6E A;  1I50 K;  5IYB K;  5IYB C;  4A3C K;  4A3C C;  5C4X C;  4XSX A;  3HOV K;  3HOV C;  2NVY K;  2O5I A;  3RZO K;  3S1Q K;  1R9T K;  5IYC K;  5IYC C;  5TMC A;  1SFO C;  1TWH K;  1TWH C;  5C4J K;  5C4J C;  1SFO K;  4A3K K;  4A3K C;  3PO3 C;  3K7A K;  3K7A C;  4C3H C;  4X6A C;  4C3H K;  1K83 K;  1Y1W C;  5C3E K;  5C3E C;  5FJ8 K;  4A3M K;  4A3M C;  4MQ9 A;  4MEX A;  5IYD C;  1I6V A;  4LJZ A;  4A3B K;  4A3B C;  3GTJ K;  3GTJ C;  2PPB A;  3HOY C;  4C2M K;  4C2M C;  4QJV B;  5D4D A;  3HOY K;  4XSZ A;  5M5Y K;  5TMF A;  4LLG A;  1XPP A;  4BBR C;  4BBR K;  3GTO K;  3GTO C;  3HOZ K;  3HOZ C;  1Y1V K;  1Y1V C;  1TWC K;  1TWC C;  2JA6 K;  3HOX K;  1TWA K;  1TWA C;  3S1M K;  3S1M C;  4KN7 A;  4QIW D;  1ZYR A;  2R7Z K;  2R7Z C;  4A3L C;  3H0G K;  3H0G C;  4A3L K;  4QIW L;  2NVY C;  3EQL A;  4A3E C;  4YFX A;  4A3E K;  1IW7 A;  4A3F C;  4A93 C;  4A3F K;  2WB1 D;  5M5X K;  4A93 K;  4OIN A;  4C3I K;  2Y0S D;  4C3I C;  4BXX C;  4BXX K;  4Q4Z A;  2WB1 L;  2Y0S L;  4LK0 A;  4AYB D;  1I6H K;  1I6H C;  2JA8 C;  2JA8 K;  1TWF K;  1TWF C;  1K83 C;  4AYB L;  1YNJ A;  2JA5 C;  5M3M K;  2JA5 K;  3S16 K;  3S16 C;  4BY1 K;  4BY1 C;  2R93 K;  3HOW K;  3HOW C;  4Q5S A;  4G7Z A;  1I3Q K;  1I3Q C;  3S1R K;  3S1R C;  3GTP C;  4BY7 C;  3H3V D;  3GTP K;  3M4O C;  3M4O K;  4OIR A;  4BY7 K;  3H3V L;  4NOI A;  2WAQ D;  4QJV A;  4YFK A;  4Y7N K;  4Y7N C;  3GTL K;  3GTL C;  2E2J C;  2E2J K;  2WAQ L;  2R92 K;  2R92 C;  3I4N C;  1SMY A;  5M3F K;  3I4N K;  3WOD A;  4G7H A;  3RZO C;  2A6H A;  4JK1 A;  4OIO A;  3HOX C;  5IP9 C;  1R9T C;  3S1Q C;  2A68 A;  2R93 C;  5IP9 K;  4XLP A;  4A3D C;  3HKZ D;  4A3D K;  4A3G K;  3DXJ A;  3HKZ L;  1YNN A;  2VUM C;  2VUM K;  4BBS K;  4YFN A;  4A3I C;  4BBS C;  3S15 C;  4A3I K;  2NVQ C;  3FKI K;  3FKI C;  2NVQ K;  2A69 A;  3S15 K;  4Y52 K;  4Y52 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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