3S1QC

Rna polymerase ii initiation complex with a 5-nt 3'-deoxy rna soaked with atp
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription/rna/dna
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1qC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1qC01
4X6AK 4X6AC 1TWAK 1TWAC 4A3MK 4A3MC 5C4JK 4A3JK 4A3JC 3HKZD 4XLPA 1SFOK 1I50C 1SFOC 2NVQK 4Q5SA 1YNNA 5FLMK 5FLMC 3S1QK 2E2JK 3S1QC 2E2JC 3S14K 3S14C 1SMYA 4OIOA 1HQMA 3GTMK 3GTMC 1Y1WK 2YU9K 1Y1WC 2YU9C 4A3EK 2Y0SD 4A3EC 1I6HK 1I6HC 3S1MC 1ZYRA 5IYBC 5IYBK 3RZDC 2O5JA 4C2MC 3S17K 3S17C 4XSXA 3GTJK 1BDFA 3GTJC 2BE5A 2CW0A 4BY1C 3S16C 4C3HC 4QIWL 4C3HK 4BY1K 3HOUK 3S16K 1IW7A 4KMUA 4A3BC 4XLNA 3DXJA 2PPBA 4BY7K 1YNJA 4BY7C 1TWHK 2WAQD 1TWHC 5IP7C 5M5YK 5D4DA 2R92K 2R92C 4NOIA 1I50K 1TWFK 4OIPA 4KN7A 5TMCA 4QJVB 3I4MK 3I4MC 2PMZL 1WCMC 4AYBL 2NVXK 1TWCC 4XSZA 2NVXC 3GTQC 4BBSC 2WB1L 3GTQK 4BBSK 4LK1A 3M4OK 3M4OC 2A6EA 4A3FC 3CQZK 3CQZC 2R93K 2R93C 3S1MK 3I4NK 3I4NC 3RZDK 1TWGK 2NVYK 1TWGC 2NVYC 4C2MK 4BXXK 4BXXC 1XPPA 4A3IC 3WODA 3HOXK 2JA6K 3HOXC 2JA6C 4YG2A 5TMFA 3H3VL 4A3KK 4A3KC 2PA8L 4Y7NK 4Y7NC 1I6VA 1I3QK 1I3QC 3GTPK 4A3BK 3GTPC 5C3EK 2B63K 5C3EC 2B63C 4A3GC 4A3GK 4MEYA 4LK0A 4C3IK 4C3IC 5IP7K 3H0GC 4LJZA 4G7HA 2E2HC 1R9TK 3RZOK 1R9TC 3RZOC 2A6HA 3HOZK 3HOZC 5C44K 4OINA 5C44C 1WCMK 3S2DK 3S2DC 4ZH4A 4GZYA 1TWCK 4Y52K 4A3LK 4Y52C 4G7OA 4A3LC 3GTGK 3GTGC 4A3FK 3M3YK 4AYBD 3M3YC 4Q4ZA 2WB1D 3GTKK 2NVTC 3GTKC 4YFNA 2JA8C 3S2HC 4G7ZA 3PO3K 3PO3C 5C4XK 4OIRA 5C4XC 2JA5C 4A3IK 2A68A 4A93C 1Y1VK 1Y1VC 5M5XK 5FJ8K 4A3CK 4A93K 3EQLA 4A3CC 3GTLC 3HKZL 5M5WK 3GTLK 5IYDK 5IYDC 5IP9K 5IP9C 2JA7K 2A69A 2JA7C 4LLGA 3S1RK 3S1RC 3S1NK 5C4JC 4MQ9A 3S1NC 3FKIK 2R7ZK 3FKIC 4QIWD 2R7ZC 3H3VD 3S15C 2NVQC 3S15K 2PA8D 3H0GK 2E2HK 2Y0SL 3HOWK 2E2IK 3HOWC 4YFXA 2E2IC 3GTOC 4YFKA 4QJVA 4OIQA 3GTOK 4A3DK 4A3DC 5IYCK 5IYCC 2PMZD 2JA5K 4MEXA 2O5IA 4C3JK 4C3JC 4KN4A 4BBRK 4BBRC 2NVTK 3HOYK 3S2HK 3HOYC 2JA8K 4JK1A 5M3MK 1K83K 1K83C 3HOUC 3K7AK 3K7AC 2WAQL 2VUMK 2VUMC 5M3FK 3PO2C 3PO2K 3HOVK 3HOVC 1TWFC
chains in the Genus database with same CATH superfamily
3OPFA 2R93A 4X6AC 1WOPA 1C0AA 4A3JC 3IPJA 1F93A 1I50C 1EI6A 4WJ3M 4IOAS 4Q5SA 3ADAC 2E2JK 3S1QC 3L4JA 1XZQB 3GTMC 4O2DA 1DCOA 1TWHA 1O27A 4C2MC 5E68A 4KMHA 3S17K 2R92A 3PIOS 1O28A 1O29A 3GTJC 5JVHS 4AH6A 4FM9A 4C3HC 3CAGA 3HOUK 1FEUA 4KMUA 3MMLB 3CQZA 1YNJA 1TWHK 2WAQD 2CFAB 5D4DA 2R92K 4NOIA 4OIPA 4WFAS 3GTLA 1WCMC 4BBSC 4BLBA 4LK1A 3M4OK 2A6EA 1WSVA 2ZJRS 3CQZK 2R93C 3L4KA 4BXXK 2W7VA 2RGRA 1XPPA 3HXAA 2E2IA 4P5BA 3GTOA 1BGWA 1VH2A 4Y7NC 1I6VA 4WILA 5EGEA 4A3BK 1J6VA 5C3EK 4A3GC 2FQOA 1VLOA 1VRQC 5IOSA 1YX2A 4C3IC 3S0XA 2GSNA 3H0GC 3GTKA 4G7HA 3LPXA 2KXYA 1ZQ1C 1IQ0A 1Y1VA 3HOZK 3A8KA 5C44K 3S2DK 4GZYA 3FOEA 1TWCK 1TWAA 4A3FK 1XZPB 2GSUA 1WOOA 3M3YC 4Q4ZA 5IOQA 1BJTA 2R7ZA 3GTKK 2NVTC 3S2HC 4GT9A 1O2FB 1O2AA 4G0VA 5C4XC 1DCPA 2A68A 1Y1VK 3GTLC 5IYDK 5IP9C 3S1RK 3S1NK 3AD7C 4BKWA 2JH3A 2R7ZK 3S15C 2NVQC 3BP3A 2PA8D 2ZJQS 1F9NA 4KARA 2E2IC 3GTOC 2GSOA 4A3DK 1F7UA 3FHZA 4WJ4A 5IYCC 3NUHA 3BUEA 1EK8A 1I50A 2V6TA 1K83K 3K7AK 3T00A 2WAQL 5M3FK 3G4AA 5CHPA 3HOVC 3A8IA 4X6AK 2L3UA 5DM7S 4DDQA 1TWAC 1V5VA 4A3JK 1J6XA 1O25A 4KMAA 4XLPA 3Q3QA 5FLMC 3S1QK 3TFHA 3S14C 3GTJA 4OIOA 3GTMK 4GTLA 1Y1WC 1DD5A 1O26A 2Y0SD 5JVGS 3GTPA 1I6HC 2O5JA 4LQYA 3ERED 3GEHA 1J6WA 5HQHA 3GTJK 1WCMA 2CW0A 4C3HK 4BLAA 5EGHA 3GTGA 1XXAA 2P8TA 1B4AA 4GFQA 3JSTA 4KN7A 4ILDA 1JVIA 1WQFA 3FOFA 1WORA 3AQPA 4BBSK 4XSZA 3GTQC 2L5NA 1INNA 2R93K 3S1MK 4GTDA 3RZDK 3H0GA 4A3IC 3TTGA 1J98A 3WODA 4KC6A 3TFJA 2JA6C 3AD9C 4A3KC 2PA8L 4Y7NK 3GTPC 4A3GK 2B63C 4MEYA 4LK0A 4C3IK 5IP7K 5IORA 4WFNS 2E2HC 1VGXA 3RZOC 2A6HA 3SZYA 3LAPA 4ZH4A 1XZQA 4Y52C 1RU0A 4GTEA 5L46A 3GTGC 3M3YK 2WB1D 3N3YA 1VJEA 3PO3C 4KB4A 4OIRA 5C4XK 4A93C 3EQLA 4A3CC 3GTLK 2KQ1A 5IP9K 4GTFA 2JA7C 1ISEA 4LLGA 4RMFA 3LYWA 1PJ6A 2GAGC 3S15K 2CFAA 3T01A 2Y0SL 2E2IK 3GTOK 4YFKA 5IYCK 4MEXA 4C45A 4BBRC 2JA8K 3VA7A 5M3MK 3T02A 3HOUC 1Y1WA 3HOVK 1X31C 1TWFC 2ZJPS 1TWAK 4A3MC 5C4JK 1F7VA 3HKZD 1DCHA 1SFOC 2V6UA 5FLMK 1JOEA 3S14K 3SZZA 1O24A 1Y1WK 2YU9C 4U67S 4A3EC 1I6HK 5IYBC 1XZPA 1IS1A 4XSXA 4IOCS 1BDFA 4BY1C 3S16C 4P9SA 3GTQA 1IBAA 4A3BC 2XCRB 3DXJA 2XCQA 4BY7C 5M5YK 1XXBA 2XCOA 4LR2A 1I50K 1KQ4A 2JA5A 5TMCA 4QJVB 3I4MC 3G4CA 2JA6A 3GTQK 1TWCC 2NVXC 2WB1L 4P5AA 4A3FC 3FKIA 1USMA 5JVOA 2B63A 3I4NC 4C2MK 1TWGC 2NVYC 4XCHA 2E2HA 2RH6A 1WOSA 4GTBA 3AQOA 2JA6K 3HOXC 5TMFA 4PAAA 4A3KK 1ZBSA 4WF9S 1I3QC 3GTPK 1PJ5A 2B63K 3A8JA 5HL8A 4LJZA 4WCES 4IO9S 4FZBA 3RZOK 4KM9A 1R9TC 4PABA 3OREA 4OINA 1WCMK 4KMDA 4Y52K 2JA7A 4G7OA 4A3LC 3GTGK 4AYBD 3AH5A 4YFNA 3PO3K 3CF5S 2JA5C 4A93K 5FJ8K 4A3CK 4M1XA 5HL7S 3HKZL 5IOTA 1L0WA 1WSRA 2JA7K 2V6SA 3AD8C 3QX3A 4KAWX 1WQGA 3FKIC 3H3VD 3H0GK 5CJ9A 3HOWC 1PJ7A 1TWFA 1EQRA 1WQHA 4C3JC 1SFOA 5DM6S 4KN4A 4BBRK 2NVTK 3S2HK 1YCLA 3HOYC 2Y3PA 4JK1A 2FQTA 2VUMC 3PO2C 2YU9A 4KATA 1TWFK 2ZFZA 4A3MK 1SFOK 4G0WA 2NVQK 1YNNA 2E2JC 1SMYA 3OEPA 1HQMA 2YU9K 4A3EK 3S1MC 1ZYRA 5IYBK 1UV7A 3RZDC 3S17C 2GAHC 4LOWA 1EH1A 3BP8C 2BE5A 4QIWL 4BY1K 3S16K 1TWCA 2NVXA 3N0BA 1IW7A 4XLNA 2PPBA 1ZVUA 4BY7K 1TWHC 5IP7C 4WFBS 1EFWA 1TWGA 2NVYA 2R92C 1BS2A 3DLLS 2ZUEA 3I4MK 2PMZL 1JQWA 4AYBL 2NVXK 3GEIA 3M4OC 2ZUFA 1I3QA 3CQZC 3I4NK 1TWGK 2NVYK 4BXXC 1R9TA 2PHCB 3HOXK 4YG2A 2KWAA 3H3VL 1I3QK 5C3EC 3GEEA 2EBBA 1R9TK 1K83A 4KB2A 1O2BA 3HOZC 5C44C 3S2DC 1USOA 1G51A 3LAJA 4A3LK 3GDZA 1XXCA 3GTKC 1IE0A 2JA8C 4KASA 4J3NA 4G7ZA 4A3IK 2JA5K 5TJ3A 5M5XK 1Y1VC 3GTMA 5M5WK 1B4BA 2KPUA 4GTAA 2D6FC 5IYDC 2A69A 4GTCA 3S1RC 3N0CA 5C4JC 4MQ9A 3S1NC 1IL2A 3FKIK 3TFIA 4QIWD 2R7ZC 2P5MA 1WIHA 2E2HK 3HOWK 1HI9A 4YFXA 4OIQA 4QJVA 2VUMA 4A3DC 1AB4A 4G0UA 1ZXOA 3GSIA 2PMZD 2O5IA 4C3JK 4KM8A 3HOYK 1GE9A 3PIPS 3V4GA 1K83C 4KDDA 5JFEA 3K7AC 2VUMK 3PO2K 3GIRA
chains in the Genus database with same CATH topology
4X6AK 4X6AC 1TWAK 1TWAC 4A3MK 4A3MC 5C4JK 4A3JK 4A3JC 3HKZD 4XLPA 1SFOK 1I50C 1SFOC 2NVQK 4Q5SA 1YNNA 5FLMK 5FLMC 3S1QK 2E2JK 3S1QC 2E2JC 3S14K 3S14C 1SMYA 4OIOA 1HQMA 3GTMK 3GTMC 1Y1WK 2YU9K 1Y1WC 2YU9C 4A3EK 2Y0SD 4A3EC 1I6HK 1I6HC 3S1MC 1ZYRA 5IYBC 5IYBK 3RZDC 2O5JA 4C2MC 3S17K 3S17C 4XSXA 3GTJK 1BDFA 3GTJC 2BE5A 2CW0A 4BY1C 3S16C 4C3HC 4QIWL 4C3HK 4BY1K 3HOUK 3S16K 1IW7A 4KMUA 4A3BC 4XLNA 3DXJA 2PPBA 4BY7K 1YNJA 4BY7C 1TWHK 2WAQD 1TWHC 5IP7C 5M5YK 5D4DA 2R92K 2R92C 4NOIA 1I50K 1TWFK 4OIPA 4KN7A 5TMCA 4QJVB 3I4MK 3I4MC 2PMZL 1WCMC 4AYBL 2NVXK 1TWCC 4XSZA 2NVXC 3GTQC 4BBSC 2WB1L 3GTQK 4BBSK 4LK1A 3M4OK 3M4OC 2A6EA 4A3FC 3CQZK 3CQZC 2R93K 2R93C 3S1MK 3I4NK 3I4NC 3RZDK 1TWGK 2NVYK 1TWGC 2NVYC 4C2MK 4BXXK 4BXXC 1XPPA 4A3IC 3WODA 3HOXK 2JA6K 3HOXC 2JA6C 4YG2A 5TMFA 3H3VL 4A3KK 4A3KC 2PA8L 4Y7NK 4Y7NC 1I6VA 1I3QK 1I3QC 3GTPK 4A3BK 3GTPC 5C3EK 2B63K 5C3EC 2B63C 4A3GC 4A3GK 4MEYA 4LK0A 4C3IK 4C3IC 5IP7K 3H0GC 4LJZA 4G7HA 2E2HC 1R9TK 3RZOK 1R9TC 3RZOC 2A6HA 3HOZK 3HOZC 5C44K 4OINA 5C44C 1WCMK 3S2DK 3S2DC 4ZH4A 4GZYA 1TWCK 4Y52K 4A3LK 4Y52C 4G7OA 4A3LC 3GTGK 3GTGC 4A3FK 3M3YK 4AYBD 3M3YC 4Q4ZA 2WB1D 3GTKK 2NVTC 3GTKC 4YFNA 2JA8C 3S2HC 4G7ZA 3PO3K 3PO3C 5C4XK 4OIRA 5C4XC 2JA5C 4A3IK 2A68A 4A93C 1Y1VK 1Y1VC 5M5XK 5FJ8K 4A3CK 4A93K 3EQLA 4A3CC 3GTLC 3HKZL 5M5WK 3GTLK 5IYDK 5IYDC 5IP9K 5IP9C 2JA7K 2A69A 2JA7C 4LLGA 3S1RK 3S1RC 3S1NK 5C4JC 4MQ9A 3S1NC 3FKIK 2R7ZK 3FKIC 4QIWD 2R7ZC 3H3VD 3S15C 2NVQC 3S15K 2PA8D 3H0GK 2E2HK 2Y0SL 3HOWK 2E2IK 3HOWC 4YFXA 2E2IC 3GTOC 4YFKA 4QJVA 4OIQA 3GTOK 4A3DK 4A3DC 5IYCK 5IYCC 2PMZD 2JA5K 4MEXA 2O5IA 4C3JK 4C3JC 4KN4A 4BBRK 4BBRC 2NVTK 3HOYK 3S2HK 3HOYC 2JA8K 4JK1A 5M3MK 1K83K 1K83C 3HOUC 3K7AK 3K7AC 2WAQL 2VUMK 2VUMC 5M3FK 3PO2C 3PO2K 3HOVK 3HOVC 1TWFC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4X6A K;  4X6A C;  1TWA K;  1TWA C;  4A3M K;  4A3M C;  5C4J K;  4A3J K;  4A3J C;  3HKZ D;  4XLP A;  1SFO K;  1I50 C;  1SFO C;  2NVQ K;  4Q5S A;  1YNN A;  5FLM K;  5FLM C;  3S1Q K;  2E2J K;  3S1Q C;  2E2J C;  3S14 K;  3S14 C;  1SMY A;  4OIO A;  1HQM A;  3GTM K;  3GTM C;  1Y1W K;  2YU9 K;  1Y1W C;  2YU9 C;  4A3E K;  2Y0S D;  4A3E C;  1I6H K;  1I6H C;  3S1M C;  1ZYR A;  5IYB C;  5IYB K;  3RZD C;  2O5J A;  4C2M C;  3S17 K;  3S17 C;  4XSX A;  3GTJ K;  1BDF A;  3GTJ C;  2BE5 A;  2CW0 A;  4BY1 C;  3S16 C;  4C3H C;  4QIW L;  4C3H K;  4BY1 K;  3HOU K;  3S16 K;  1IW7 A;  4KMU A;  4A3B C;  4XLN A;  3DXJ A;  2PPB A;  4BY7 K;  1YNJ A;  4BY7 C;  1TWH K;  2WAQ D;  1TWH C;  5IP7 C;  5M5Y K;  5D4D A;  2R92 K;  2R92 C;  4NOI A;  1I50 K;  1TWF K;  4OIP A;  4KN7 A;  5TMC A;  4QJV B;  3I4M K;  3I4M C;  2PMZ L;  1WCM C;  4AYB L;  2NVX K;  1TWC C;  4XSZ A;  2NVX C;  3GTQ C;  4BBS C;  2WB1 L;  3GTQ K;  4BBS K;  4LK1 A;  3M4O K;  3M4O C;  2A6E A;  4A3F C;  3CQZ K;  3CQZ C;  2R93 K;  2R93 C;  3S1M K;  3I4N K;  3I4N C;  3RZD K;  1TWG K;  2NVY K;  1TWG C;  2NVY C;  4C2M K;  4BXX K;  4BXX C;  1XPP A;  4A3I C;  3WOD A;  3HOX K;  2JA6 K;  3HOX C;  2JA6 C;  4YG2 A;  5TMF A;  3H3V L;  4A3K K;  4A3K C;  2PA8 L;  4Y7N K;  4Y7N C;  1I6V A;  1I3Q K;  1I3Q C;  3GTP K;  4A3B K;  3GTP C;  5C3E K;  2B63 K;  5C3E C;  2B63 C;  4A3G C;  4A3G K;  4MEY A;  4LK0 A;  4C3I K;  4C3I C;  5IP7 K;  3H0G C;  4LJZ A;  4G7H A;  2E2H C;  1R9T K;  3RZO K;  1R9T C;  3RZO C;  2A6H A;  3HOZ K;  3HOZ C;  5C44 K;  4OIN A;  5C44 C;  1WCM K;  3S2D K;  3S2D C;  4ZH4 A;  4GZY A;  1TWC K;  4Y52 K;  4A3L K;  4Y52 C;  4G7O A;  4A3L C;  3GTG K;  3GTG C;  4A3F K;  3M3Y K;  4AYB D;  3M3Y C;  4Q4Z A;  2WB1 D;  3GTK K;  2NVT C;  3GTK C;  4YFN A;  2JA8 C;  3S2H C;  4G7Z A;  3PO3 K;  3PO3 C;  5C4X K;  4OIR A;  5C4X C;  2JA5 C;  4A3I K;  2A68 A;  4A93 C;  1Y1V K;  1Y1V C;  5M5X K;  5FJ8 K;  4A3C K;  4A93 K;  3EQL A;  4A3C C;  3GTL C;  3HKZ L;  5M5W K;  3GTL K;  5IYD K;  5IYD C;  5IP9 K;  5IP9 C;  2JA7 K;  2A69 A;  2JA7 C;  4LLG A;  3S1R K;  3S1R C;  3S1N K;  5C4J C;  4MQ9 A;  3S1N C;  3FKI K;  2R7Z K;  3FKI C;  4QIW D;  2R7Z C;  3H3V D;  3S15 C;  2NVQ C;  3S15 K;  2PA8 D;  3H0G K;  2E2H K;  2Y0S L;  3HOW K;  2E2I K;  3HOW C;  4YFX A;  2E2I C;  3GTO C;  4YFK A;  4QJV A;  4OIQ A;  3GTO K;  4A3D K;  4A3D C;  5IYC K;  5IYC C;  2PMZ D;  2JA5 K;  4MEX A;  2O5I A;  4C3J K;  4C3J C;  4KN4 A;  4BBR K;  4BBR C;  2NVT K;  3HOY K;  3S2H K;  3HOY C;  2JA8 K;  4JK1 A;  5M3M K;  1K83 K;  1K83 C;  3HOU C;  3K7A K;  3K7A C;  2WAQ L;  2VUM K;  2VUM C;  5M3F K;  3PO2 C;  3PO2 K;  3HOV K;  3HOV C;  1TWF C; 
#chains in the Genus database with same CATH topology
 3OPF A;  2R93 A;  4X6A C;  1WOP A;  1C0A A;  4A3J C;  3IPJ A;  1F93 A;  1I50 C;  1EI6 A;  4WJ3 M;  4IOA S;  4Q5S A;  3ADA C;  2E2J K;  3S1Q C;  3L4J A;  1XZQ B;  3GTM C;  4O2D A;  1DCO A;  1TWH A;  1O27 A;  4C2M C;  5E68 A;  4KMH A;  3S17 K;  2R92 A;  3PIO S;  1O28 A;  1O29 A;  3GTJ C;  5JVH S;  4AH6 A;  4FM9 A;  4C3H C;  3CAG A;  3HOU K;  1FEU A;  4KMU A;  3MML B;  3CQZ A;  1YNJ A;  1TWH K;  2WAQ D;  2CFA B;  5D4D A;  2R92 K;  4NOI A;  4OIP A;  4WFA S;  3GTL A;  1WCM C;  4BBS C;  4BLB A;  4LK1 A;  3M4O K;  2A6E A;  1WSV A;  2ZJR S;  3CQZ K;  2R93 C;  3L4K A;  4BXX K;  2W7V A;  2RGR A;  1XPP A;  3HXA A;  2E2I A;  4P5B A;  3GTO A;  1BGW A;  1VH2 A;  4Y7N C;  1I6V A;  4WIL A;  5EGE A;  4A3B K;  1J6V A;  5C3E K;  4A3G C;  2FQO A;  1VLO A;  1VRQ C;  5IOS A;  1YX2 A;  4C3I C;  3S0X A;  2GSN A;  3H0G C;  3GTK A;  4G7H A;  3LPX A;  2KXY A;  1ZQ1 C;  1IQ0 A;  1Y1V A;  3HOZ K;  3A8K A;  5C44 K;  3S2D K;  4GZY A;  3FOE A;  1TWC K;  1TWA A;  4A3F K;  1XZP B;  2GSU A;  1WOO A;  3M3Y C;  4Q4Z A;  5IOQ A;  1BJT A;  2R7Z A;  3GTK K;  2NVT C;  3S2H C;  4GT9 A;  1O2F B;  1O2A A;  4G0V A;  5C4X C;  1DCP A;  2A68 A;  1Y1V K;  3GTL C;  5IYD K;  5IP9 C;  3S1R K;  3S1N K;  3AD7 C;  4BKW A;  2JH3 A;  2R7Z K;  3S15 C;  2NVQ C;  3BP3 A;  2PA8 D;  2ZJQ S;  1F9N A;  4KAR A;  2E2I C;  3GTO C;  2GSO A;  4A3D K;  1F7U A;  3FHZ A;  4WJ4 A;  5IYC C;  3NUH A;  3BUE A;  1EK8 A;  1I50 A;  2V6T A;  1K83 K;  3K7A K;  3T00 A;  2WAQ L;  5M3F K;  3G4A A;  5CHP A;  3HOV C;  3A8I A;  4X6A K;  2L3U A;  5DM7 S;  4DDQ A;  1TWA C;  1V5V A;  4A3J K;  1J6X A;  1O25 A;  4KMA A;  4XLP A;  3Q3Q A;  5FLM C;  3S1Q K;  3TFH A;  3S14 C;  3GTJ A;  4OIO A;  3GTM K;  4GTL A;  1Y1W C;  1DD5 A;  1O26 A;  2Y0S D;  5JVG S;  3GTP A;  1I6H C;  2O5J A;  4LQY A;  3ERE D;  3GEH A;  1J6W A;  5HQH A;  3GTJ K;  1WCM A;  2CW0 A;  4C3H K;  4BLA A;  5EGH A;  3GTG A;  1XXA A;  2P8T A;  1B4A A;  4GFQ A;  3JST A;  4KN7 A;  4ILD A;  1JVI A;  1WQF A;  3FOF A;  1WOR A;  3AQP A;  4BBS K;  4XSZ A;  3GTQ C;  2L5N A;  1INN A;  2R93 K;  3S1M K;  4GTD A;  3RZD K;  3H0G A;  4A3I C;  3TTG A;  1J98 A;  3WOD A;  4KC6 A;  3TFJ A;  2JA6 C;  3AD9 C;  4A3K C;  2PA8 L;  4Y7N K;  3GTP C;  4A3G K;  2B63 C;  4MEY A;  4LK0 A;  4C3I K;  5IP7 K;  5IOR A;  4WFN S;  2E2H C;  1VGX A;  3RZO C;  2A6H A;  3SZY A;  3LAP A;  4ZH4 A;  1XZQ A;  4Y52 C;  1RU0 A;  4GTE A;  5L46 A;  3GTG C;  3M3Y K;  2WB1 D;  3N3Y A;  1VJE A;  3PO3 C;  4KB4 A;  4OIR A;  5C4X K;  4A93 C;  3EQL A;  4A3C C;  3GTL K;  2KQ1 A;  5IP9 K;  4GTF A;  2JA7 C;  1ISE A;  4LLG A;  4RMF A;  3LYW A;  1PJ6 A;  2GAG C;  3S15 K;  2CFA A;  3T01 A;  2Y0S L;  2E2I K;  3GTO K;  4YFK A;  5IYC K;  4MEX A;  4C45 A;  4BBR C;  2JA8 K;  3VA7 A;  5M3M K;  3T02 A;  3HOU C;  1Y1W A;  3HOV K;  1X31 C;  1TWF C;  2ZJP S;  1TWA K;  4A3M C;  5C4J K;  1F7V A;  3HKZ D;  1DCH A;  1SFO C;  2V6U A;  5FLM K;  1JOE A;  3S14 K;  3SZZ A;  1O24 A;  1Y1W K;  2YU9 C;  4U67 S;  4A3E C;  1I6H K;  5IYB C;  1XZP A;  1IS1 A;  4XSX A;  4IOC S;  1BDF A;  4BY1 C;  3S16 C;  4P9S A;  3GTQ A;  1IBA A;  4A3B C;  2XCR B;  3DXJ A;  2XCQ A;  4BY7 C;  5M5Y K;  1XXB A;  2XCO A;  4LR2 A;  1I50 K;  1KQ4 A;  2JA5 A;  5TMC A;  4QJV B;  3I4M C;  3G4C A;  2JA6 A;  3GTQ K;  1TWC C;  2NVX C;  2WB1 L;  4P5A A;  4A3F C;  3FKI A;  1USM A;  5JVO A;  2B63 A;  3I4N C;  4C2M K;  1TWG C;  2NVY C;  4XCH A;  2E2H A;  2RH6 A;  1WOS A;  4GTB A;  3AQO A;  2JA6 K;  3HOX C;  5TMF A;  4PAA A;  4A3K K;  1ZBS A;  4WF9 S;  1I3Q C;  3GTP K;  1PJ5 A;  2B63 K;  3A8J A;  5HL8 A;  4LJZ A;  4WCE S;  4IO9 S;  4FZB A;  3RZO K;  4KM9 A;  1R9T C;  4PAB A;  3ORE A;  4OIN A;  1WCM K;  4KMD A;  4Y52 K;  2JA7 A;  4G7O A;  4A3L C;  3GTG K;  4AYB D;  3AH5 A;  4YFN A;  3PO3 K;  3CF5 S;  2JA5 C;  4A93 K;  5FJ8 K;  4A3C K;  4M1X A;  5HL7 S;  3HKZ L;  5IOT A;  1L0W A;  1WSR A;  2JA7 K;  2V6S A;  3AD8 C;  3QX3 A;  4KAW X;  1WQG A;  3FKI C;  3H3V D;  3H0G K;  5CJ9 A;  3HOW C;  1PJ7 A;  1TWF A;  1EQR A;  1WQH A;  4C3J C;  1SFO A;  5DM6 S;  4KN4 A;  4BBR K;  2NVT K;  3S2H K;  1YCL A;  3HOY C;  2Y3P A;  4JK1 A;  2FQT A;  2VUM C;  3PO2 C;  2YU9 A;  4KAT A;  1TWF K;  2ZFZ A;  4A3M K;  1SFO K;  4G0W A;  2NVQ K;  1YNN A;  2E2J C;  1SMY A;  3OEP A;  1HQM A;  2YU9 K;  4A3E K;  3S1M C;  1ZYR A;  5IYB K;  1UV7 A;  3RZD C;  3S17 C;  2GAH C;  4LOW A;  1EH1 A;  3BP8 C;  2BE5 A;  4QIW L;  4BY1 K;  3S16 K;  1TWC A;  2NVX A;  3N0B A;  1IW7 A;  4XLN A;  2PPB A;  1ZVU A;  4BY7 K;  1TWH C;  5IP7 C;  4WFB S;  1EFW A;  1TWG A;  2NVY A;  2R92 C;  1BS2 A;  3DLL S;  2ZUE A;  3I4M K;  2PMZ L;  1JQW A;  4AYB L;  2NVX K;  3GEI A;  3M4O C;  2ZUF A;  1I3Q A;  3CQZ C;  3I4N K;  1TWG K;  2NVY K;  4BXX C;  1R9T A;  2PHC B;  3HOX K;  4YG2 A;  2KWA A;  3H3V L;  1I3Q K;  5C3E C;  3GEE A;  2EBB A;  1R9T K;  1K83 A;  4KB2 A;  1O2B A;  3HOZ C;  5C44 C;  3S2D C;  1USO A;  1G51 A;  3LAJ A;  4A3L K;  3GDZ A;  1XXC A;  3GTK C;  1IE0 A;  2JA8 C;  4KAS A;  4J3N A;  4G7Z A;  4A3I K;  2JA5 K;  5TJ3 A;  5M5X K;  1Y1V C;  3GTM A;  5M5W K;  1B4B A;  2KPU A;  4GTA A;  2D6F C;  5IYD C;  2A69 A;  4GTC A;  3S1R C;  3N0C A;  5C4J C;  4MQ9 A;  3S1N C;  1IL2 A;  3FKI K;  3TFI A;  4QIW D;  2R7Z C;  2P5M A;  1WIH A;  2E2H K;  3HOW K;  1HI9 A;  4YFX A;  4OIQ A;  4QJV A;  2VUM A;  4A3D C;  1AB4 A;  4G0U A;  1ZXO A;  3GSI A;  2PMZ D;  2O5I A;  4C3J K;  4KM8 A;  3HOY K;  1GE9 A;  3PIP S;  3V4G A;  1K83 C;  4KDD A;  5JFE A;  3K7A C;  2VUM K;  3PO2 K;  3GIR A; 
#chains in the Genus database with same CATH homology
 4X6A K;  4X6A C;  1TWA K;  1TWA C;  4A3M K;  4A3M C;  5C4J K;  4A3J K;  4A3J C;  3HKZ D;  4XLP A;  1SFO K;  1I50 C;  1SFO C;  2NVQ K;  4Q5S A;  1YNN A;  5FLM K;  5FLM C;  3S1Q K;  2E2J K;  3S1Q C;  2E2J C;  3S14 K;  3S14 C;  1SMY A;  4OIO A;  1HQM A;  3GTM K;  3GTM C;  1Y1W K;  2YU9 K;  1Y1W C;  2YU9 C;  4A3E K;  2Y0S D;  4A3E C;  1I6H K;  1I6H C;  3S1M C;  1ZYR A;  5IYB C;  5IYB K;  3RZD C;  2O5J A;  4C2M C;  3S17 K;  3S17 C;  4XSX A;  3GTJ K;  1BDF A;  3GTJ C;  2BE5 A;  2CW0 A;  4BY1 C;  3S16 C;  4C3H C;  4QIW L;  4C3H K;  4BY1 K;  3HOU K;  3S16 K;  1IW7 A;  4KMU A;  4A3B C;  4XLN A;  3DXJ A;  2PPB A;  4BY7 K;  1YNJ A;  4BY7 C;  1TWH K;  2WAQ D;  1TWH C;  5IP7 C;  5M5Y K;  5D4D A;  2R92 K;  2R92 C;  4NOI A;  1I50 K;  1TWF K;  4OIP A;  4KN7 A;  5TMC A;  4QJV B;  3I4M K;  3I4M C;  2PMZ L;  1WCM C;  4AYB L;  2NVX K;  1TWC C;  4XSZ A;  2NVX C;  3GTQ C;  4BBS C;  2WB1 L;  3GTQ K;  4BBS K;  4LK1 A;  3M4O K;  3M4O C;  2A6E A;  4A3F C;  3CQZ K;  3CQZ C;  2R93 K;  2R93 C;  3S1M K;  3I4N K;  3I4N C;  3RZD K;  1TWG K;  2NVY K;  1TWG C;  2NVY C;  4C2M K;  4BXX K;  4BXX C;  1XPP A;  4A3I C;  3WOD A;  3HOX K;  2JA6 K;  3HOX C;  2JA6 C;  4YG2 A;  5TMF A;  3H3V L;  4A3K K;  4A3K C;  2PA8 L;  4Y7N K;  4Y7N C;  1I6V A;  1I3Q K;  1I3Q C;  3GTP K;  4A3B K;  3GTP C;  5C3E K;  2B63 K;  5C3E C;  2B63 C;  4A3G C;  4A3G K;  4MEY A;  4LK0 A;  4C3I K;  4C3I C;  5IP7 K;  3H0G C;  4LJZ A;  4G7H A;  2E2H C;  1R9T K;  3RZO K;  1R9T C;  3RZO C;  2A6H A;  3HOZ K;  3HOZ C;  5C44 K;  4OIN A;  5C44 C;  1WCM K;  3S2D K;  3S2D C;  4ZH4 A;  4GZY A;  1TWC K;  4Y52 K;  4A3L K;  4Y52 C;  4G7O A;  4A3L C;  3GTG K;  3GTG C;  4A3F K;  3M3Y K;  4AYB D;  3M3Y C;  4Q4Z A;  2WB1 D;  3GTK K;  2NVT C;  3GTK C;  4YFN A;  2JA8 C;  3S2H C;  4G7Z A;  3PO3 K;  3PO3 C;  5C4X K;  4OIR A;  5C4X C;  2JA5 C;  4A3I K;  2A68 A;  4A93 C;  1Y1V K;  1Y1V C;  5M5X K;  5FJ8 K;  4A3C K;  4A93 K;  3EQL A;  4A3C C;  3GTL C;  3HKZ L;  5M5W K;  3GTL K;  5IYD K;  5IYD C;  5IP9 K;  5IP9 C;  2JA7 K;  2A69 A;  2JA7 C;  4LLG A;  3S1R K;  3S1R C;  3S1N K;  5C4J C;  4MQ9 A;  3S1N C;  3FKI K;  2R7Z K;  3FKI C;  4QIW D;  2R7Z C;  3H3V D;  3S15 C;  2NVQ C;  3S15 K;  2PA8 D;  3H0G K;  2E2H K;  2Y0S L;  3HOW K;  2E2I K;  3HOW C;  4YFX A;  2E2I C;  3GTO C;  4YFK A;  4QJV A;  4OIQ A;  3GTO K;  4A3D K;  4A3D C;  5IYC K;  5IYC C;  2PMZ D;  2JA5 K;  4MEX A;  2O5I A;  4C3J K;  4C3J C;  4KN4 A;  4BBR K;  4BBR C;  2NVT K;  3HOY K;  3S2H K;  3HOY C;  2JA8 K;  4JK1 A;  5M3M K;  1K83 K;  1K83 C;  3HOU C;  3K7A K;  3K7A C;  2WAQ L;  2VUM K;  2VUM C;  5M3F K;  3PO2 C;  3PO2 K;  3HOV K;  3HOV C;  1TWF C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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