3S1QC

Rna polymerase ii initiation complex with a 5-nt 3'-deoxy rna soaked with atp
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1qC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1qC01
5IP7K 4QIWL 3S1NK 3PO3K 4KN7A 4QIWD 3GTQC 2NVXC 4A3GC 4X6AC 4A3EK 3GTGK 2YU9C 4A3BC 1BDFA 1Y1VC 2R93C 2R92K 4MEXA 3M3YC 4LK0A 4A3EC 3GTGC 4XLPA 2WB1L 3RZDK 3I4MC 3PO2C 4GZYA 5M5XK 3FKIC 3I4NK 3I4MK 4BY1C 3PO2K 5D4DA 1Y1WC 3HOWC 4X6AK 3S2DK 4Q5SA 1SMYA 4BBSC 4JK1A 4LLGA 3S2HC 2O5JA 4BY1K 2NVQC 5IP7C 1I6VA 4LK1A 4C2MC 3PO3C 4A3LC 3GTPK 3HOYK 2PMZD 4BBSK 3S14C 1TWCC 3S1MC 4C3IC 4KN4A 3DXJA 3S1RK 4AYBL 4AYBD 3S1QC 1ZYRA 2PPBA 4A3DK 3HOYC 2WAQL 1TWFC 3S16C 2R92C 3GTLC 4G7OA 1Y1VK 4A3JK 3S2DC 2NVYC 4MEYA 3HOUC 2JA7C 3GTMC 5C44K 3GTJK 2E2JK 2WB1D 5IP9C 4Y7NC 1WCMK 3K7AK 5IYCK 4C2MK 3S1QK 4LJZA 3GTKK 3M4OK 4XLNA 5TMCA 2B63C 3S1MK 5C4XC 5C3EC 2CW0A 5TMFA 4MQ9A 3S17C 2JA8K 5IYDK 1YNJA 4OIRA 4YFXA 3RZOK 1TWHK 5M3MK 4C3HK 2E2HC 4C3JC 3HKZL 4C3HC 3H0GC 3HOZC 3S14K 1WCMC 2NVTC 3GTOC 5IP9K 4Y7NK 3S1NC 5FJ8K 4YG2A 4A93K 3HOXC 4BY7K 1I50K 4A3IK 4A3MK 4QJVA 5C4XK 2E2HK 2JA5C 4BXXC 2YU9K 2WAQD 4XSZA 1TWCK 2R93K 4A93C 4BY7C 5M5YK 2A6HA 5IYDC 3H3VL 4Y52K 4A3GK 3S2HK 2NVTK 3GTOK 5FLMK 1TWAK 2E2JC 2A68A 2NVYK 5C3EK 5C4JK 3GTLK 3HOWK 3HOXK 5FLMC 1I6HC 4C3IK 1IW7A 4XSXA 2JA6C 1I3QK 3FKIK 3HOVK 5C44C 4Y52C 3GTJC 4KMUA 3HOUK 1YNNA 2A69A 1Y1WK 3M3YK 4YFNA 4BBRK 4G7HA 2JA5K 4BXXK 2A6EA 3GTQK 4QJVB 2PMZL 3RZOC 3CQZK 1K83C 1I3QC 4A3FC 1XPPA 2JA6K 3K7AC 5IYCC 3S17K 4A3CC 3S1RC 2Y0SD 5C4JC 2PA8D 5IYBC 4OIOA 4A3JC 3S15C 1TWHC 2PA8L 2Y0SL 1TWGK 5M3FK 2B63K 3GTPC 4A3BK 3EQLA 4G7ZA 4A3KC 4OINA 2R7ZC 4A3DC 2JA8C 3H3VD 3CQZC 1TWGC 1HQMA 5M5WK 3H0GK 4YFKA 4BBRC 4A3CK 1SFOC 1R9TK 4OIQA 3S15K 2VUMK 3HOVC 1K83K 3RZDC 3GTKC 3M4OC 3HOZK 4A3FK 2O5IA 2R7ZK 1I6HK 3WODA 4C3JK 4Q4ZA 4ZH4A 1I50C 1TWAC 2BE5A 2E2IC 4OIPA 1TWFK 3S16K 4A3KK 3HKZD 2VUMC 3I4NC 2NVQK 4A3LK 2E2IK 2JA7K 3GTMK 5IYBK 4NOIA 4A3IC 4A3MC 1R9TC 1SFOK 2NVXK
chains in the Genus database with same CATH superfamily
1WSVA 4AH6A 3AD9C 3GTQC 3M3YC 1EH1A 5JVOA 3AD8C 2KPUA 3PO2C 3IPJA 3I4NK 5EGEA 1VRQC 3CF5S 4BY1C 3HOWC 1KQ4A 3S2DK 1VJEA 4Q5SA 4GTFA 1SMYA 4PABA 2GSUA 3HOYK 4KATA 3GTPK 2PMZD 1VLOA 3S1MC 4C3IC 2V6SA 1XXBA 4AYBD 1JQWA 1O2BA 5L46A 2WAQL 4IO9S 3S16C 2Y3PA 4MEYA 1HI9A 2WB1D 4Y7NC 1WCMK 3K7AK 4C2MK 4LJZA 2JH3A 3OREA 2B63C 1ISEA 5C3EC 1ZQ1C 2EBBA 1AB4A 4YFXA 4GTDA 3HXAA 2E2HC 5IOSA 4BLAA 3H0GC 2ZJQS 1YX2A 4J3NA 5JVHS 3GTLA 1WOPA 4A93K 1WORA 3GTKA 4QJVA 2JA5C 4BXXC 1DCPA 2WAQD 1XZQB 2ZJRS 3S2HK 5FLMK 3GEHA 4BKWA 2GSNA 4KAWX 1I3QK 3FKIK 1JVIA 3PIPS 1O27A 5C44C 3GTJC 1O25A 3ADAC 1Y1WK 4YFNA 2VUMA 3Q3QA 2JA7A 1I50A 1IBAA 3TTGA 2R93A 1IL2A 1J98A 4A3FC 2NVXA 3G4CA 1C0AA 4GTAA 2PA8D 5C4JC 2XCOA 2Y0SL 1TWHC 1IQ0A 1TWGK 5M3FK 4A3BK 1PJ6A 1F7VA 4XCHA 1JOEA 1O29A 4A3DC 2JA8C 1HQMA 5DM6S 3A8IA 1TWCA 2L5NA 3MMLB 4OIQA 4KM8A 3SZZA 1RU0A 3HOVC 1ZXOA 3M4OC 3HOZK 4LQYA 3GSIA 1I3QA 4C3JK 3S16K 4WFBS 3HKZD 4KASA 2V6UA 2JA7K 4NOIA 1SFOK 4LR2A 1R9TA 4QIWL 3L4JA 1YCLA 2NVXC 4A3GC 1XZPB 1F9NA 4KMDA 2YU9C 4A3BC 1Y1VC 2R93C 2FQTA 2R92K 4LK0A 1WOSA 3V4GA 4XLPA 3RZDK 3FKIC 2GAHC 3PO2K 5CHPA 3GTJA 3TFHA 1Y1WC 1EI6A 3N0CA 4BBSC 4JK1A 2O5JA 3S2HC 2FQOA 1I6VA 4C2MC 3GEIA 3LPXA 4KN4A 3S1RK 3BUEA 5HL8A 3BP8C 3S1QC 1ZYRA 2PPBA 4A3DK 2V6TA 4G7OA 3GTLC 4A3JK 3S2DC 3JSTA 3HOUC 2NVYA 1ZVUA 1G51A 3AQPA 2R92A 2YU9A 2E2HA 4WCES 5C4XC 2CW0A 1USOA 4C45A 2ZUEA 4C3HC 3G4AA 3HOZC 1WCMC 2NVTC 4Y7NK 1DCOA 3AQOA 3T02A 1WQFA 4WF9S 3HOXC 4A93C 5IYDC 1GE9A 4FM9A 2RGRA 2NVTK 4DDQA 1PJ7A 1TWAK 2A68A 5C4JK 4KB2A 4C3IK 1IW7A 4XSXA 1DD5A 1J6WA 1O2FB 4FZBA 4GTCA 4PAAA 4Y52C 4KMUA 2A69A 4IOCS 1EQRA 2E2IA 1O24A 4QJVB 3RZOC 4G0UA 3CQZK 3K7AC 3S15C 4A3JC 2PA8L 4ILDA 2B63K 3EQLA 4G7ZA 4OINA 2P5MA 2XCQA 5M5WK 4LOWA 4M1XA 4BBRC 2XCRB 5CJ9A 3S15K 1K83K 2JA5A 3RZDC 3GTKC 3TFIA 1VH2A 3WODA 3FKIA 1V5VA 2E2IC 1TWFK 3BP3A 2CFAB 2L3UA 2ZFZA 4KDDA 4P5AA 5JFEA 3CQZA 2ZJPS 1R9TC 1PJ5A 2NVXK 4A3GK 3PO3K 3S1NK 1X31C 4KN7A 4QIWD 2B63A 4A3EK 4X6AC 3GTGK 1USMA 1F7UA 2WB1L 2KQ1A 5M5XK 2RH6A 5IORA 3I4MK 5D4DA 4X6AK 1WCMA 4LLGA 3FOEA 4GTEA 2NVQC 5IP7C 4A3LC 2D6FC 4BBSK 1WQGA 1TWCC 3ERED 3DXJA 4KM9A 2GAGC 3TFJA 1TWHA 3HOYC 3CAGA 1WQHA 1ZBSA 3OEPA 2R92C 1Y1VK 3GTOA 2NVYC 2E2JK 2JA7C 3GTLK 5IYCK 3N0BA 3GTKK 5TMCA 4WJ3M 5TMFA 4MQ9A 3GEEA 5IYDK 1IS1A 1XXAA 5EGHA 5HQHA 1O26A 4C3HK 4C3JC 2W7VA 5IP9K 1Y1WA 3S1NC 3DLLS 4YG2A 4BY7K 3GDZA 4A3IK 4A3MK 5C4XK 2E2HK 3H0GA 4GT9A 2A6HA 1O2AA 1Y1VA 5TJ3A 3H3VL 3AD7C 4BLBA 2E2JC 2NVYK 1TWGA 2KWAA 3HOWK 1B4BA 2R7ZA 1I6HC 5IOTA 3HOUK 3M3YK 4KARA 4KMHA 1EK8A 4BBRK 4G7HA 3GTQK 1B4AA 2PMZL 1K83C 1I3QC 3S17K 4G0WA 3S1RC 4KB4A 4IOAS 1BJTA 3QX3A 3GTPC 1WSRA 5DM7S 1R9TK 1J6XA 2VUMK 1TWAA 5HL7S 1I6HK 4P5BA 4RMFA 1I50C 1TWAC 2BE5A 1EFWA 4OIPA 4A3KK 2VUMC 3I4NC 2NVQK 4A3LK 2E2IK 3GTQA 5IYBK 4A3IC 4A3MC 3FOFA 3GTPA 1BGWA 3LYWA 5IP7K 2CFAA 1BDFA 4MEXA 4A3EC 3GTGC 3A8KA 3I4MC 4GZYA 3FHZA 5E68A 1TWFA 1VGXA 5JVGS 4GTLA 4BY1K 3OPFA 3PO3C 4LK1A 1SFOA 3S14C 4G0VA 4WFAS 4AYBL 4WJ4A 1TWFC 4P9SA 3L4KA 2P8TA 5C44K 3GTJK 3GTMC 3GTGA 5IP9C 1O28A 3S1QK 3M4OK 4XLNA 4GTBA 3N3YA 1XZPA 1L0WA 3S1MK 3S17C 2JA8K 3S0XA 1YNJA 4OIRA 3LAPA 3RZOK 1TWHK 3A8JA 5M3MK 1UV7A 3HKZL 1XXCA 3S14K 3GTOC 4WILA 5FJ8K 1DCHA 1I50K 3NUHA 2YU9K 4KMAA 2R93K 4XSZA 1TWCK 4BY7C 4O2DA 5M5YK 4Y52K 3GTOK 1BS2A 5C3EK 1INNA 4WFNS 5FLMC 1WIHA 3HOXK 2JA6C 3HOVK 1YNNA 1WOOA 1F93A 2ZUFA 1K83A 2A6EA 2JA5K 4BXXK 3GTMA 1XPPA 3AH5A 2JA6K 5IYCC 4A3CC 3T00A 2Y0SD 5IYBC 4OIOA 2PHCB 1IE0A 2R7ZC 2GSOA 4A3KC 3H3VD 3CQZC 1TWGC 1FEUA 3H0GK 3PIOS 4YFKA 3VA7A 4A3CK 1SFOC 4U67S 1XZQA 4A3FK 2O5IA 2R7ZK 3GIRA 3SZYA 4KC6A 4Q4ZA 4ZH4A 4GFQA 5IOQA 2KXYA 3T01A 3GTMK 1J6VA 3LAJA 2JA6A
chains in the Genus database with same CATH topology
5IP7K 4QIWL 3S1NK 3PO3K 4KN7A 4QIWD 3GTQC 2NVXC 4A3GC 4X6AC 4A3EK 3GTGK 2YU9C 4A3BC 1BDFA 1Y1VC 2R93C 2R92K 4MEXA 3M3YC 4LK0A 4A3EC 3GTGC 4XLPA 2WB1L 3RZDK 3I4MC 3PO2C 4GZYA 5M5XK 3FKIC 3I4NK 3I4MK 4BY1C 3PO2K 5D4DA 1Y1WC 3HOWC 4X6AK 3S2DK 4Q5SA 1SMYA 4BBSC 4JK1A 4LLGA 3S2HC 2O5JA 4BY1K 2NVQC 5IP7C 1I6VA 4LK1A 4C2MC 3PO3C 4A3LC 3GTPK 3HOYK 2PMZD 4BBSK 3S14C 1TWCC 3S1MC 4C3IC 4KN4A 3DXJA 3S1RK 4AYBL 4AYBD 3S1QC 1ZYRA 2PPBA 4A3DK 3HOYC 2WAQL 1TWFC 3S16C 2R92C 3GTLC 4G7OA 1Y1VK 4A3JK 3S2DC 2NVYC 4MEYA 3HOUC 2JA7C 3GTMC 5C44K 3GTJK 2E2JK 2WB1D 5IP9C 4Y7NC 1WCMK 3K7AK 5IYCK 4C2MK 3S1QK 4LJZA 3GTKK 3M4OK 4XLNA 5TMCA 2B63C 3S1MK 5C4XC 5C3EC 2CW0A 5TMFA 4MQ9A 3S17C 2JA8K 5IYDK 1YNJA 4OIRA 4YFXA 3RZOK 1TWHK 5M3MK 4C3HK 2E2HC 4C3JC 3HKZL 4C3HC 3H0GC 3HOZC 3S14K 1WCMC 2NVTC 3GTOC 5IP9K 4Y7NK 3S1NC 5FJ8K 4YG2A 4A93K 3HOXC 4BY7K 1I50K 4A3IK 4A3MK 4QJVA 5C4XK 2E2HK 2JA5C 4BXXC 2YU9K 2WAQD 4XSZA 1TWCK 2R93K 4A93C 4BY7C 5M5YK 2A6HA 5IYDC 3H3VL 4Y52K 4A3GK 3S2HK 2NVTK 3GTOK 5FLMK 1TWAK 2E2JC 2A68A 2NVYK 5C3EK 5C4JK 3GTLK 3HOWK 3HOXK 5FLMC 1I6HC 4C3IK 1IW7A 4XSXA 2JA6C 1I3QK 3FKIK 3HOVK 5C44C 4Y52C 3GTJC 4KMUA 3HOUK 1YNNA 2A69A 1Y1WK 3M3YK 4YFNA 4BBRK 4G7HA 2JA5K 4BXXK 2A6EA 3GTQK 4QJVB 2PMZL 3RZOC 3CQZK 1K83C 1I3QC 4A3FC 1XPPA 2JA6K 3K7AC 5IYCC 3S17K 4A3CC 3S1RC 2Y0SD 5C4JC 2PA8D 5IYBC 4OIOA 4A3JC 3S15C 1TWHC 2PA8L 2Y0SL 1TWGK 5M3FK 2B63K 3GTPC 4A3BK 3EQLA 4G7ZA 4A3KC 4OINA 2R7ZC 4A3DC 2JA8C 3H3VD 3CQZC 1TWGC 1HQMA 5M5WK 3H0GK 4YFKA 4BBRC 4A3CK 1SFOC 1R9TK 4OIQA 3S15K 2VUMK 3HOVC 1K83K 3RZDC 3GTKC 3M4OC 3HOZK 4A3FK 2O5IA 2R7ZK 1I6HK 3WODA 4C3JK 4Q4ZA 4ZH4A 1I50C 1TWAC 2BE5A 2E2IC 4OIPA 1TWFK 3S16K 4A3KK 3HKZD 2VUMC 3I4NC 2NVQK 4A3LK 2E2IK 2JA7K 3GTMK 5IYBK 4NOIA 4A3IC 4A3MC 1R9TC 1SFOK 2NVXK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5IP7 K;  4QIW L;  3S1N K;  3PO3 K;  4KN7 A;  4QIW D;  3GTQ C;  2NVX C;  4A3G C;  4X6A C;  4A3E K;  3GTG K;  2YU9 C;  4A3B C;  1BDF A;  1Y1V C;  2R93 C;  2R92 K;  4MEX A;  3M3Y C;  4LK0 A;  4A3E C;  3GTG C;  4XLP A;  2WB1 L;  3RZD K;  3I4M C;  3PO2 C;  4GZY A;  5M5X K;  3FKI C;  3I4N K;  3I4M K;  4BY1 C;  3PO2 K;  5D4D A;  1Y1W C;  3HOW C;  4X6A K;  3S2D K;  4Q5S A;  1SMY A;  4BBS C;  4JK1 A;  4LLG A;  3S2H C;  2O5J A;  4BY1 K;  2NVQ C;  5IP7 C;  1I6V A;  4LK1 A;  4C2M C;  3PO3 C;  4A3L C;  3GTP K;  3HOY K;  2PMZ D;  4BBS K;  3S14 C;  1TWC C;  3S1M C;  4C3I C;  4KN4 A;  3DXJ A;  3S1R K;  4AYB L;  4AYB D;  3S1Q C;  1ZYR A;  2PPB A;  4A3D K;  3HOY C;  2WAQ L;  1TWF C;  3S16 C;  2R92 C;  3GTL C;  4G7O A;  1Y1V K;  4A3J K;  3S2D C;  2NVY C;  4MEY A;  3HOU C;  2JA7 C;  3GTM C;  5C44 K;  3GTJ K;  2E2J K;  2WB1 D;  5IP9 C;  4Y7N C;  1WCM K;  3K7A K;  5IYC K;  4C2M K;  3S1Q K;  4LJZ A;  3GTK K;  3M4O K;  4XLN A;  5TMC A;  2B63 C;  3S1M K;  5C4X C;  5C3E C;  2CW0 A;  5TMF A;  4MQ9 A;  3S17 C;  2JA8 K;  5IYD K;  1YNJ A;  4OIR A;  4YFX A;  3RZO K;  1TWH K;  5M3M K;  4C3H K;  2E2H C;  4C3J C;  3HKZ L;  4C3H C;  3H0G C;  3HOZ C;  3S14 K;  1WCM C;  2NVT C;  3GTO C;  5IP9 K;  4Y7N K;  3S1N C;  5FJ8 K;  4YG2 A;  4A93 K;  3HOX C;  4BY7 K;  1I50 K;  4A3I K;  4A3M K;  4QJV A;  5C4X K;  2E2H K;  2JA5 C;  4BXX C;  2YU9 K;  2WAQ D;  4XSZ A;  1TWC K;  2R93 K;  4A93 C;  4BY7 C;  5M5Y K;  2A6H A;  5IYD C;  3H3V L;  4Y52 K;  4A3G K;  3S2H K;  2NVT K;  3GTO K;  5FLM K;  1TWA K;  2E2J C;  2A68 A;  2NVY K;  5C3E K;  5C4J K;  3GTL K;  3HOW K;  3HOX K;  5FLM C;  1I6H C;  4C3I K;  1IW7 A;  4XSX A;  2JA6 C;  1I3Q K;  3FKI K;  3HOV K;  5C44 C;  4Y52 C;  3GTJ C;  4KMU A;  3HOU K;  1YNN A;  2A69 A;  1Y1W K;  3M3Y K;  4YFN A;  4BBR K;  4G7H A;  2JA5 K;  4BXX K;  2A6E A;  3GTQ K;  4QJV B;  2PMZ L;  3RZO C;  3CQZ K;  1K83 C;  1I3Q C;  4A3F C;  1XPP A;  2JA6 K;  3K7A C;  5IYC C;  3S17 K;  4A3C C;  3S1R C;  2Y0S D;  5C4J C;  2PA8 D;  5IYB C;  4OIO A;  4A3J C;  3S15 C;  1TWH C;  2PA8 L;  2Y0S L;  1TWG K;  5M3F K;  2B63 K;  3GTP C;  4A3B K;  3EQL A;  4G7Z A;  4A3K C;  4OIN A;  2R7Z C;  4A3D C;  2JA8 C;  3H3V D;  3CQZ C;  1TWG C;  1HQM A;  5M5W K;  3H0G K;  4YFK A;  4BBR C;  4A3C K;  1SFO C;  1R9T K;  4OIQ A;  3S15 K;  2VUM K;  3HOV C;  1K83 K;  3RZD C;  3GTK C;  3M4O C;  3HOZ K;  4A3F K;  2O5I A;  2R7Z K;  1I6H K;  3WOD A;  4C3J K;  4Q4Z A;  4ZH4 A;  1I50 C;  1TWA C;  2BE5 A;  2E2I C;  4OIP A;  1TWF K;  3S16 K;  4A3K K;  3HKZ D;  2VUM C;  3I4N C;  2NVQ K;  4A3L K;  2E2I K;  2JA7 K;  3GTM K;  5IYB K;  4NOI A;  4A3I C;  4A3M C;  1R9T C;  1SFO K;  2NVX K; 
#chains in the Genus database with same CATH topology
 1WSV A;  4AH6 A;  3AD9 C;  3GTQ C;  3M3Y C;  1EH1 A;  5JVO A;  3AD8 C;  2KPU A;  3PO2 C;  3IPJ A;  3I4N K;  5EGE A;  1VRQ C;  3CF5 S;  4BY1 C;  3HOW C;  1KQ4 A;  3S2D K;  1VJE A;  4Q5S A;  4GTF A;  1SMY A;  4PAB A;  2GSU A;  3HOY K;  4KAT A;  3GTP K;  2PMZ D;  1VLO A;  3S1M C;  4C3I C;  2V6S A;  1XXB A;  4AYB D;  1JQW A;  1O2B A;  5L46 A;  2WAQ L;  4IO9 S;  3S16 C;  2Y3P A;  4MEY A;  1HI9 A;  2WB1 D;  4Y7N C;  1WCM K;  3K7A K;  4C2M K;  4LJZ A;  2JH3 A;  3ORE A;  2B63 C;  1ISE A;  5C3E C;  1ZQ1 C;  2EBB A;  1AB4 A;  4YFX A;  4GTD A;  3HXA A;  2E2H C;  5IOS A;  4BLA A;  3H0G C;  2ZJQ S;  1YX2 A;  4J3N A;  5JVH S;  3GTL A;  1WOP A;  4A93 K;  1WOR A;  3GTK A;  4QJV A;  2JA5 C;  4BXX C;  1DCP A;  2WAQ D;  1XZQ B;  2ZJR S;  3S2H K;  5FLM K;  3GEH A;  4BKW A;  2GSN A;  4KAW X;  1I3Q K;  3FKI K;  1JVI A;  3PIP S;  1O27 A;  5C44 C;  3GTJ C;  1O25 A;  3ADA C;  1Y1W K;  4YFN A;  2VUM A;  3Q3Q A;  2JA7 A;  1I50 A;  1IBA A;  3TTG A;  2R93 A;  1IL2 A;  1J98 A;  4A3F C;  2NVX A;  3G4C A;  1C0A A;  4GTA A;  2PA8 D;  5C4J C;  2XCO A;  2Y0S L;  1TWH C;  1IQ0 A;  1TWG K;  5M3F K;  4A3B K;  1PJ6 A;  1F7V A;  4XCH A;  1JOE A;  1O29 A;  4A3D C;  2JA8 C;  1HQM A;  5DM6 S;  3A8I A;  1TWC A;  2L5N A;  3MML B;  4OIQ A;  4KM8 A;  3SZZ A;  1RU0 A;  3HOV C;  1ZXO A;  3M4O C;  3HOZ K;  4LQY A;  3GSI A;  1I3Q A;  4C3J K;  3S16 K;  4WFB S;  3HKZ D;  4KAS A;  2V6U A;  2JA7 K;  4NOI A;  1SFO K;  4LR2 A;  1R9T A;  4QIW L;  3L4J A;  1YCL A;  2NVX C;  4A3G C;  1XZP B;  1F9N A;  4KMD A;  2YU9 C;  4A3B C;  1Y1V C;  2R93 C;  2FQT A;  2R92 K;  4LK0 A;  1WOS A;  3V4G A;  4XLP A;  3RZD K;  3FKI C;  2GAH C;  3PO2 K;  5CHP A;  3GTJ A;  3TFH A;  1Y1W C;  1EI6 A;  3N0C A;  4BBS C;  4JK1 A;  2O5J A;  3S2H C;  2FQO A;  1I6V A;  4C2M C;  3GEI A;  3LPX A;  4KN4 A;  3S1R K;  3BUE A;  5HL8 A;  3BP8 C;  3S1Q C;  1ZYR A;  2PPB A;  4A3D K;  2V6T A;  4G7O A;  3GTL C;  4A3J K;  3S2D C;  3JST A;  3HOU C;  2NVY A;  1ZVU A;  1G51 A;  3AQP A;  2R92 A;  2YU9 A;  2E2H A;  4WCE S;  5C4X C;  2CW0 A;  1USO A;  4C45 A;  2ZUE A;  4C3H C;  3G4A A;  3HOZ C;  1WCM C;  2NVT C;  4Y7N K;  1DCO A;  3AQO A;  3T02 A;  1WQF A;  4WF9 S;  3HOX C;  4A93 C;  5IYD C;  1GE9 A;  4FM9 A;  2RGR A;  2NVT K;  4DDQ A;  1PJ7 A;  1TWA K;  2A68 A;  5C4J K;  4KB2 A;  4C3I K;  1IW7 A;  4XSX A;  1DD5 A;  1J6W A;  1O2F B;  4FZB A;  4GTC A;  4PAA A;  4Y52 C;  4KMU A;  2A69 A;  4IOC S;  1EQR A;  2E2I A;  1O24 A;  4QJV B;  3RZO C;  4G0U A;  3CQZ K;  3K7A C;  3S15 C;  4A3J C;  2PA8 L;  4ILD A;  2B63 K;  3EQL A;  4G7Z A;  4OIN A;  2P5M A;  2XCQ A;  5M5W K;  4LOW A;  4M1X A;  4BBR C;  2XCR B;  5CJ9 A;  3S15 K;  1K83 K;  2JA5 A;  3RZD C;  3GTK C;  3TFI A;  1VH2 A;  3WOD A;  3FKI A;  1V5V A;  2E2I C;  1TWF K;  3BP3 A;  2CFA B;  2L3U A;  2ZFZ A;  4KDD A;  4P5A A;  5JFE A;  3CQZ A;  2ZJP S;  1R9T C;  1PJ5 A;  2NVX K;  4A3G K;  3PO3 K;  3S1N K;  1X31 C;  4KN7 A;  4QIW D;  2B63 A;  4A3E K;  4X6A C;  3GTG K;  1USM A;  1F7U A;  2WB1 L;  2KQ1 A;  5M5X K;  2RH6 A;  5IOR A;  3I4M K;  5D4D A;  4X6A K;  1WCM A;  4LLG A;  3FOE A;  4GTE A;  2NVQ C;  5IP7 C;  4A3L C;  2D6F C;  4BBS K;  1WQG A;  1TWC C;  3ERE D;  3DXJ A;  4KM9 A;  2GAG C;  3TFJ A;  1TWH A;  3HOY C;  3CAG A;  1WQH A;  1ZBS A;  3OEP A;  2R92 C;  1Y1V K;  3GTO A;  2NVY C;  2E2J K;  2JA7 C;  3GTL K;  5IYC K;  3N0B A;  3GTK K;  5TMC A;  4WJ3 M;  5TMF A;  4MQ9 A;  3GEE A;  5IYD K;  1IS1 A;  1XXA A;  5EGH A;  5HQH A;  1O26 A;  4C3H K;  4C3J C;  2W7V A;  5IP9 K;  1Y1W A;  3S1N C;  3DLL S;  4YG2 A;  4BY7 K;  3GDZ A;  4A3I K;  4A3M K;  5C4X K;  2E2H K;  3H0G A;  4GT9 A;  2A6H A;  1O2A A;  1Y1V A;  5TJ3 A;  3H3V L;  3AD7 C;  4BLB A;  2E2J C;  2NVY K;  1TWG A;  2KWA A;  3HOW K;  1B4B A;  2R7Z A;  1I6H C;  5IOT A;  3HOU K;  3M3Y K;  4KAR A;  4KMH A;  1EK8 A;  4BBR K;  4G7H A;  3GTQ K;  1B4A A;  2PMZ L;  1K83 C;  1I3Q C;  3S17 K;  4G0W A;  3S1R C;  4KB4 A;  4IOA S;  1BJT A;  3QX3 A;  3GTP C;  1WSR A;  5DM7 S;  1R9T K;  1J6X A;  2VUM K;  1TWA A;  5HL7 S;  1I6H K;  4P5B A;  4RMF A;  1I50 C;  1TWA C;  2BE5 A;  1EFW A;  4OIP A;  4A3K K;  2VUM C;  3I4N C;  2NVQ K;  4A3L K;  2E2I K;  3GTQ A;  5IYB K;  4A3I C;  4A3M C;  3FOF A;  3GTP A;  1BGW A;  3LYW A;  5IP7 K;  2CFA A;  1BDF A;  4MEX A;  4A3E C;  3GTG C;  3A8K A;  3I4M C;  4GZY A;  3FHZ A;  5E68 A;  1TWF A;  1VGX A;  5JVG S;  4GTL A;  4BY1 K;  3OPF A;  3PO3 C;  4LK1 A;  1SFO A;  3S14 C;  4G0V A;  4WFA S;  4AYB L;  4WJ4 A;  1TWF C;  4P9S A;  3L4K A;  2P8T A;  5C44 K;  3GTJ K;  3GTM C;  3GTG A;  5IP9 C;  1O28 A;  3S1Q K;  3M4O K;  4XLN A;  4GTB A;  3N3Y A;  1XZP A;  1L0W A;  3S1M K;  3S17 C;  2JA8 K;  3S0X A;  1YNJ A;  4OIR A;  3LAP A;  3RZO K;  1TWH K;  3A8J A;  5M3M K;  1UV7 A;  3HKZ L;  1XXC A;  3S14 K;  3GTO C;  4WIL A;  5FJ8 K;  1DCH A;  1I50 K;  3NUH A;  2YU9 K;  4KMA A;  2R93 K;  4XSZ A;  1TWC K;  4BY7 C;  4O2D A;  5M5Y K;  4Y52 K;  3GTO K;  1BS2 A;  5C3E K;  1INN A;  4WFN S;  5FLM C;  1WIH A;  3HOX K;  2JA6 C;  3HOV K;  1YNN A;  1WOO A;  1F93 A;  2ZUF A;  1K83 A;  2A6E A;  2JA5 K;  4BXX K;  3GTM A;  1XPP A;  3AH5 A;  2JA6 K;  5IYC C;  4A3C C;  3T00 A;  2Y0S D;  5IYB C;  4OIO A;  2PHC B;  1IE0 A;  2R7Z C;  2GSO A;  4A3K C;  3H3V D;  3CQZ C;  1TWG C;  1FEU A;  3H0G K;  3PIO S;  4YFK A;  3VA7 A;  4A3C K;  1SFO C;  4U67 S;  1XZQ A;  4A3F K;  2O5I A;  2R7Z K;  3GIR A;  3SZY A;  4KC6 A;  4Q4Z A;  4ZH4 A;  4GFQ A;  5IOQ A;  2KXY A;  3T01 A;  3GTM K;  1J6V A;  3LAJ A;  2JA6 A; 
#chains in the Genus database with same CATH homology
 5IP7 K;  4QIW L;  3S1N K;  3PO3 K;  4KN7 A;  4QIW D;  3GTQ C;  2NVX C;  4A3G C;  4X6A C;  4A3E K;  3GTG K;  2YU9 C;  4A3B C;  1BDF A;  1Y1V C;  2R93 C;  2R92 K;  4MEX A;  3M3Y C;  4LK0 A;  4A3E C;  3GTG C;  4XLP A;  2WB1 L;  3RZD K;  3I4M C;  3PO2 C;  4GZY A;  5M5X K;  3FKI C;  3I4N K;  3I4M K;  4BY1 C;  3PO2 K;  5D4D A;  1Y1W C;  3HOW C;  4X6A K;  3S2D K;  4Q5S A;  1SMY A;  4BBS C;  4JK1 A;  4LLG A;  3S2H C;  2O5J A;  4BY1 K;  2NVQ C;  5IP7 C;  1I6V A;  4LK1 A;  4C2M C;  3PO3 C;  4A3L C;  3GTP K;  3HOY K;  2PMZ D;  4BBS K;  3S14 C;  1TWC C;  3S1M C;  4C3I C;  4KN4 A;  3DXJ A;  3S1R K;  4AYB L;  4AYB D;  3S1Q C;  1ZYR A;  2PPB A;  4A3D K;  3HOY C;  2WAQ L;  1TWF C;  3S16 C;  2R92 C;  3GTL C;  4G7O A;  1Y1V K;  4A3J K;  3S2D C;  2NVY C;  4MEY A;  3HOU C;  2JA7 C;  3GTM C;  5C44 K;  3GTJ K;  2E2J K;  2WB1 D;  5IP9 C;  4Y7N C;  1WCM K;  3K7A K;  5IYC K;  4C2M K;  3S1Q K;  4LJZ A;  3GTK K;  3M4O K;  4XLN A;  5TMC A;  2B63 C;  3S1M K;  5C4X C;  5C3E C;  2CW0 A;  5TMF A;  4MQ9 A;  3S17 C;  2JA8 K;  5IYD K;  1YNJ A;  4OIR A;  4YFX A;  3RZO K;  1TWH K;  5M3M K;  4C3H K;  2E2H C;  4C3J C;  3HKZ L;  4C3H C;  3H0G C;  3HOZ C;  3S14 K;  1WCM C;  2NVT C;  3GTO C;  5IP9 K;  4Y7N K;  3S1N C;  5FJ8 K;  4YG2 A;  4A93 K;  3HOX C;  4BY7 K;  1I50 K;  4A3I K;  4A3M K;  4QJV A;  5C4X K;  2E2H K;  2JA5 C;  4BXX C;  2YU9 K;  2WAQ D;  4XSZ A;  1TWC K;  2R93 K;  4A93 C;  4BY7 C;  5M5Y K;  2A6H A;  5IYD C;  3H3V L;  4Y52 K;  4A3G K;  3S2H K;  2NVT K;  3GTO K;  5FLM K;  1TWA K;  2E2J C;  2A68 A;  2NVY K;  5C3E K;  5C4J K;  3GTL K;  3HOW K;  3HOX K;  5FLM C;  1I6H C;  4C3I K;  1IW7 A;  4XSX A;  2JA6 C;  1I3Q K;  3FKI K;  3HOV K;  5C44 C;  4Y52 C;  3GTJ C;  4KMU A;  3HOU K;  1YNN A;  2A69 A;  1Y1W K;  3M3Y K;  4YFN A;  4BBR K;  4G7H A;  2JA5 K;  4BXX K;  2A6E A;  3GTQ K;  4QJV B;  2PMZ L;  3RZO C;  3CQZ K;  1K83 C;  1I3Q C;  4A3F C;  1XPP A;  2JA6 K;  3K7A C;  5IYC C;  3S17 K;  4A3C C;  3S1R C;  2Y0S D;  5C4J C;  2PA8 D;  5IYB C;  4OIO A;  4A3J C;  3S15 C;  1TWH C;  2PA8 L;  2Y0S L;  1TWG K;  5M3F K;  2B63 K;  3GTP C;  4A3B K;  3EQL A;  4G7Z A;  4A3K C;  4OIN A;  2R7Z C;  4A3D C;  2JA8 C;  3H3V D;  3CQZ C;  1TWG C;  1HQM A;  5M5W K;  3H0G K;  4YFK A;  4BBR C;  4A3C K;  1SFO C;  1R9T K;  4OIQ A;  3S15 K;  2VUM K;  3HOV C;  1K83 K;  3RZD C;  3GTK C;  3M4O C;  3HOZ K;  4A3F K;  2O5I A;  2R7Z K;  1I6H K;  3WOD A;  4C3J K;  4Q4Z A;  4ZH4 A;  1I50 C;  1TWA C;  2BE5 A;  2E2I C;  4OIP A;  1TWF K;  3S16 K;  4A3K K;  3HKZ D;  2VUM C;  3I4N C;  2NVQ K;  4A3L K;  2E2I K;  2JA7 K;  3GTM K;  5IYB K;  4NOI A;  4A3I C;  4A3M C;  1R9T C;  1SFO K;  2NVX K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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