3S1QC

Rna polymerase ii initiation complex with a 5-nt 3'-deoxy rna soaked with atp
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1qC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1qC01
4YFXA 3GTQK 1TWAC 4A3EC 1I50K 4AYBD 2WB1D 4BBRC 2JA5K 4G7HA 2PA8L 4Y52C 2NVQK 4A3JK 3HOWK 4A3IC 3GTMC 3S1RC 5M5YK 4YFKA 2A68A 3I4NC 3HOXK 1IW7A 3S17C 3GTJK 2R93K 3M4OC 4BBSC 1BDFA 4YFNA 3H0GK 4A3BC 2YU9K 3I4MK 4X6AK 2NVXC 2NVTC 1YNJA 1YNNA 2B63C 4A3GC 3H3VL 2VUMK 4QJVB 3S15K 5IYBC 3S16K 3S2HC 3HOZC 1TWGK 4QIWL 4C2MK 4A3CK 1I6HK 3HKZL 3K7AC 2E2IC 4Y7NK 3S1QK 2JA7C 3S2DK 3PO2K 3M3YK 3CQZK 5C4JC 3FKIC 4A3MK 4MEXA 5C4XC 1R9TC 1K83K 1TWCK 3I4NK 3GTKK 2A69A 4YG2A 3HOUC 1I3QK 3GTGC 4BBSK 2PMZD 1TWFC 4BY7C 2PPBA 2E2HK 2NVTK 5C3EC 3RZOC 2Y0SD 4OIRA 2JA6C 4A93C 4C3JC 5M5WK 4XSZA 1Y1WC 2R92K 1WCMC 5IYBK 4LLGA 1I6VA 2JA8C 3K7AK 4A3DC 2A6EA 3GTOC 3RZDC 3S1MK 5C44K 3GTPK 1SMYA 2E2JK 1ZYRA 5M3MK 5IP9C 5IYDK 2R7ZC 2WAQD 5D4DA 5TMCA 3HOVK 5FLMK 5TMFA 1TWAK 4A3EK 4LK1A 4MEYA 5IP7C 4BBRK 4BY1C 4C3HK 2Y0SL 4AYBL 4C3IC 4A3LC 2WB1L 4A3IK 2CW0A 3S1RK 3GTMK 4Y52K 1SFOC 3GTLC 1Y1VC 3S17K 1TWHC 3M4OK 4BXXC 4A3BK 2NVYC 2NVXK 2B63K 4A3GK 4G7OA 3HOYC 4OIOA 4A3KC 4KMUA 3PO3C 3S1NC 3EQLA 4NOIA 3S14C 4Y7NC 5C44C 4C3HC 3S2HK 3HOZK 4LJZA 1I50C 3GTQC 2E2IK 2JA7K 2JA5C 3HOWC 2NVQC 4Q5SA 3FKIK 4A3JC 5C4JK 4G7ZA 3HOXC 5C4XK 1R9TK 4Q4ZA 3GTJC 3HOUK 3GTGK 2O5JA 4OIQA 1TWFK 3H0GC 4X6AC 4XSXA 2YU9C 3H3VD 3I4MC 2PMZL 5C3EK 3RZOK 4BY7K 1HQMA 2JA6K 4A93K 4C3JK 4QIWD 3WODA 2VUMC 1Y1WK 1WCMK 3HKZD 3S15C 3S16C 1TWGC 4LK0A 4C2MC 4A3FC 4A3CC 1I6HC 5M3FK 2JA8K 3GTOK 2O5IA 5IYCC 3S1QC 3RZDK 4A3DK 3S2DC 3M3YC 3PO2C 3CQZC 4A3MC 4ZH4A 1K83C 1TWCC 2R93C 4KN7A 3GTKC 1I3QC 5IP9K 2R7ZK 2BE5A 4OIPA 2E2HC 2WAQL 3DXJA 4XLNA 2PA8D 5IP7K 4BY1K 4JK1A 4C3IK 2R92C 5FJ8K 4A3LK 4OINA 1SFOK 3GTLK 1XPPA 4GZYA 1Y1VK 1TWHK 4QJVA 4A3FK 5IYCK 3S1MC 3GTPC 4BXXK 2NVYK 4KN4A 2E2JC 3HOYK 5M5XK 4XLPA 4A3KK 5IYDC 2A6HA 3PO3K 3S1NK 3S14K 3HOVC 5FLMC 4MQ9A
chains in the Genus database with same CATH superfamily
2JA6A 2WB1D 4GTFA 1WCMA 3G4CA 2PA8L 1BGWA 4GTEA 4YFKA 3GTJK 3GEEA 2NVTC 2B63C 4LOWA 3H0GA 5JVGS 3S15K 1TWGK 4QIWL 4A3CK 1I6HK 3HKZL 2CFAA 3PO2K 1EH1A 3AH5A 5C4JC 4WF9S 5IOSA 2JH3A 5C4XC 1R9TC 2GAHC 3LYWA 3GTKK 1I3QK 3GTGC 4BBSK 1K83A 5CHPA 3CAGA 1IQ0A 4A93C 1VGXA 4XSZA 1WOPA 5TJ3A 3N3YA 1ZVUA 3BP3A 3GEHA 3GTPA 1EK8A 2YU9A 2R7ZC 5TMCA 4GTBA 3CF5S 5TMFA 1F7UA 4LK1A 4MEYA 1XZQA 1ZQ1C 3NUHA 1WQHA 2Y0SL 4WFAS 4C3IC 3AD7C 4AYBL 4A3IK 4U67S 1UV7A 1DCHA 1L0WA 4BXXC 2NVYC 4A3GK 4G7OA 4OIOA 4KMUA 1J6XA 3PO3C 1F7VA 3EQLA 4Y7NC 1WSRA 4C3HC 1O24A 3S2HK 3HOZK 1O25A 2FQOA 3TFJA 2JA5C 4AH6A 3HOWC 4A3JC 3A8JA 2GSUA 2O5JA 1WOSA 4X6AC 4BY7K 3H3VD 2PMZL 5EGEA 5C3EK 1XZQB 3RZOK 1HQMA 3GTGA 2JA6K 2VUMC 1WCMK 3GIRA 4LK0A 4C2MC 2GSNA 3RZDK 3S1QC 3S2DC 2V6SA 2FQTA 2R93C 1B4AA 3JSTA 3N0CA 5IP9K 2WAQL 3DXJA 3OREA 1JOEA 4BY1K 5FJ8K 1VRQC 1YCLA 4A3FK 4QJVA 5IYCK 3FKIA 3S1MC 4WFNS 4KN4A 3GEIA 2E2JC 3HOYK 1TWFA 2NVYA 4IOCS 3AD8C 5FLMC 5EGHA 3GTQK 1TWAC 4A3EC 3ERED 1O27A 4Y52C 2V6TA 3GTMC 5M5YK 3HOXK 1WQFA 3S17C 3T01A 3M4OC 1WOOA 4A3BC 1J6WA 1KQ4A 2YU9K 1YNJA 3TTGA 4WILA 1INNA 1ZXOA 3IPJA 4QJVB 5IYBC 4KMAA 2E2IC 2JA7C 3M3YK 2EBBA 4A3MK 1Y1VA 1SFOA 3GTLA 1TWHA 4MEXA 2A69A 4YG2A 4FZBA 2ZUFA 2PPBA 1O2FB 2P8TA 2NVTK 3FOEA 4OIRA 3TFIA 4C3JC 1Y1WC 1I50A 3V4GA 2L5NA 5JVHS 3LPXA 4LLGA 4KMHA 2A6EA 3GTOC 5IOQA 4G0VA 3HXAA 4KARA 3FOFA 1SMYA 4J3NA 4WJ3M 5M3MK 3AQOA 1J98A 5IYDK 5JVOA 4KDDA 4BBRK 2XCQA 4A3LC 1VLOA 4GT9A 3MMLB 3S1RK 3CQZA 1XZPA 1TWCA 1JVIA 2NVXK 2E2HA 4GFQA 4NOIA 5C44C 1BS2A 3G4AA 2R92A 3LAPA 5DM7S 2GAGC 3FKIK 3GSIA 4P5BA 2JA7A 2PHCB 4KM8A 3GTJC 3HOUK 2ZUEA 4OIQA 1TWFK 4G0WA 4XSXA 2CFAB 3SZZA 4QIWD 3Q3QA 3HKZD 3S15C 1XZPB 1TWGC 4A3CC 1I6HC 1O26A 5M3FK 2JA8K 4A3DK 2O5IA 3PO2C 2V6UA 4ZH4A 1G51A 4KN7A 3GTKC 1C0AA 1I3QC 1X31C 1IL2A 2BE5A 4IO9S 2B63A 4WFBS 4PAAA 2RGRA 5IP7K 1FEUA 1J6VA 3S0XA 4OINA 1SFOK 3GTLK 1XPPA 1Y1VK 1TWHK 2GSOA 2ZFZA 1R9TA 3PIPS 1IS1A 4A3KK 3S1NK 3S14K 4MQ9A 1I50K 3VA7A 4AYBD 3FHZA 4G7HA 1O2BA 2NVQK 4A3IC 1AB4A 3I4NC 1BDFA 3H0GK 3A8KA 3I4MK 3GTJA 4GTAA 4M1XA 4A3GC 2R7ZA 3N0BA 1ISEA 5HL7S 3S16K 3S2HC 3HOZC 3K7AC 4KC6A 2P5MA 3CQZK 1K83K 1TWCK 2PMZD 5IORA 4KB4A 1B4BA 4KMDA 4BY7C 2E2HK 3GTKA 5C3EC 3RZOC 2JA6C 5M5WK 2R92K 1WCMC 5IYBK 2ZJRS 1VJEA 2JA5A 3RZDC 3GTPK 2KPUA 1WIHA 1JQWA 5IP9C 2WAQD 3HOVK 4O2DA 2VUMA 2KXYA 4BY1C 3BP8C 2WB1L 4BLAA 2Y3PA 4LQYA 2D6FC 1O29A 2RH6A 1EQRA 1ZBSA 2R93A 2B63K 3HOYC 3TFHA 4G0UA 4LJZA 3GTQC 3PIOS 1EI6A 5C4JK 4KATA 4G7ZA 3HOXC 4BKWA 5C4XK 1R9TK 4Q4ZA 1WORA 5HL8A 3GTGK 2W7VA 2YU9C 1DCOA 1PJ5A 3L4KA 3LAJA 4A93K 1TWAA 4P9SA 3AQPA 3GTMA 3M3YC 4A3MC 4PABA 4RMFA 1IBAA 4C45A 1YX2A 2R7ZK 4XLNA 2PA8D 1F93A 4JK1A 4LR2A 4C3IK 1XXBA 2E2IA 4GZYA 5IOTA 3DLLS 3GDZA 4KAWX 4BXXK 2NVYK 4GTLA 4FM9A 1IE0A 4XLPA 5IYDC 3PO3K 4Y7NK 4C3HK 3L4JA 4YFXA 5CJ9A 1Y1WA 4BBRC 2JA5K 3HOWK 3GTQA 4A3JK 2XCOA 3S1RC 4GTDA 1XXAA 2A68A 3GTOA 1IW7A 1USMA 4BBSC 4YFNA 1VH2A 4DDQA 1EFWA 4X6AK 2NVXC 2XCRB 1YNNA 3H3VL 1WSVA 2VUMK 1HI9A 3AD9C 1DCPA 4C2MK 4BLBA 3S1QK 3S2DK 3FKIC 3A8IA 3SZYA 1O2AA 3I4NK 2R93K 3HOUC 1TWFC 4WJ4A 2Y0SD 1O28A 4XCHA 2ZJPS 1I6VA 2JA8C 3K7AK 4A3DC 3S1MK 1WQGA 2E2JK 2KWAA 1ZYRA 4ILDA 5D4DA 5FLMK 5L46A 1PJ6A 1TWAK 4A3EK 5IP7C 1TWGA 4Y52K 2CW0A 3GTMK 1SFOC 3GTLC 1Y1VC 3S17K 3OPFA 1TWHC 3M4OK 4A3BK 1I3QA 1DD5A 1USOA 4A3KC 2NVXA 3S1NC 3S14C 3T00A 1I50C 2E2IK 1V5VA 2JA7K 2NVQC 4Q5SA 4P5AA 3H0GC 3I4MC 4WCES 4C3JK 3WODA 4GTCA 1Y1WK 4IOAS 3S16C 5JFEA 4A3FC 1BJTA 3GTOK 5IYCC 5DM6S 4KM9A 3CQZC 3OEPA 1K83C 1TWCC 4KB2A 5E68A 3ADAC 4OIPA 2E2HC 1F9NA 3QX3A 5HQHA 4A3LK 2R92C 4KASA 3T02A 2L3UA 3GTPC 1XXCA 2ZJQS 3BUEA 1GE9A 1PJ7A 2KQ1A 5M5XK 2A6HA 1RU0A 3HOVC 5C44K
chains in the Genus database with same CATH topology
4YFXA 3GTQK 1TWAC 4A3EC 1I50K 4AYBD 2WB1D 4BBRC 2JA5K 4G7HA 2PA8L 4Y52C 2NVQK 4A3JK 3HOWK 4A3IC 3GTMC 3S1RC 5M5YK 4YFKA 2A68A 3I4NC 3HOXK 1IW7A 3S17C 3GTJK 2R93K 3M4OC 4BBSC 1BDFA 4YFNA 3H0GK 4A3BC 2YU9K 3I4MK 4X6AK 2NVXC 2NVTC 1YNJA 1YNNA 2B63C 4A3GC 3H3VL 2VUMK 4QJVB 3S15K 5IYBC 3S16K 3S2HC 3HOZC 1TWGK 4QIWL 4C2MK 4A3CK 1I6HK 3HKZL 3K7AC 2E2IC 4Y7NK 3S1QK 2JA7C 3S2DK 3PO2K 3M3YK 3CQZK 5C4JC 3FKIC 4A3MK 4MEXA 5C4XC 1R9TC 1K83K 1TWCK 3I4NK 3GTKK 2A69A 4YG2A 3HOUC 1I3QK 3GTGC 4BBSK 2PMZD 1TWFC 4BY7C 2PPBA 2E2HK 2NVTK 5C3EC 3RZOC 2Y0SD 4OIRA 2JA6C 4A93C 4C3JC 5M5WK 4XSZA 1Y1WC 2R92K 1WCMC 5IYBK 4LLGA 1I6VA 2JA8C 3K7AK 4A3DC 2A6EA 3GTOC 3RZDC 3S1MK 5C44K 3GTPK 1SMYA 2E2JK 1ZYRA 5M3MK 5IP9C 5IYDK 2R7ZC 2WAQD 5D4DA 5TMCA 3HOVK 5FLMK 5TMFA 1TWAK 4A3EK 4LK1A 4MEYA 5IP7C 4BBRK 4BY1C 4C3HK 2Y0SL 4AYBL 4C3IC 4A3LC 2WB1L 4A3IK 2CW0A 3S1RK 3GTMK 4Y52K 1SFOC 3GTLC 1Y1VC 3S17K 1TWHC 3M4OK 4BXXC 4A3BK 2NVYC 2NVXK 2B63K 4A3GK 4G7OA 3HOYC 4OIOA 4A3KC 4KMUA 3PO3C 3S1NC 3EQLA 4NOIA 3S14C 4Y7NC 5C44C 4C3HC 3S2HK 3HOZK 4LJZA 1I50C 3GTQC 2E2IK 2JA7K 2JA5C 3HOWC 2NVQC 4Q5SA 3FKIK 4A3JC 5C4JK 4G7ZA 3HOXC 5C4XK 1R9TK 4Q4ZA 3GTJC 3HOUK 3GTGK 2O5JA 4OIQA 1TWFK 3H0GC 4X6AC 4XSXA 2YU9C 3H3VD 3I4MC 2PMZL 5C3EK 3RZOK 4BY7K 1HQMA 2JA6K 4A93K 4C3JK 4QIWD 3WODA 2VUMC 1Y1WK 1WCMK 3HKZD 3S15C 3S16C 1TWGC 4LK0A 4C2MC 4A3FC 4A3CC 1I6HC 5M3FK 2JA8K 3GTOK 2O5IA 5IYCC 3S1QC 3RZDK 4A3DK 3S2DC 3M3YC 3PO2C 3CQZC 4A3MC 4ZH4A 1K83C 1TWCC 2R93C 4KN7A 3GTKC 1I3QC 5IP9K 2R7ZK 2BE5A 4OIPA 2E2HC 2WAQL 3DXJA 4XLNA 2PA8D 5IP7K 4BY1K 4JK1A 4C3IK 2R92C 5FJ8K 4A3LK 4OINA 1SFOK 3GTLK 1XPPA 4GZYA 1Y1VK 1TWHK 4QJVA 4A3FK 5IYCK 3S1MC 3GTPC 4BXXK 2NVYK 4KN4A 2E2JC 3HOYK 5M5XK 4XLPA 4A3KK 5IYDC 2A6HA 3PO3K 3S1NK 3S14K 3HOVC 5FLMC 4MQ9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4YFX A;  3GTQ K;  1TWA C;  4A3E C;  1I50 K;  4AYB D;  2WB1 D;  4BBR C;  2JA5 K;  4G7H A;  2PA8 L;  4Y52 C;  2NVQ K;  4A3J K;  3HOW K;  4A3I C;  3GTM C;  3S1R C;  5M5Y K;  4YFK A;  2A68 A;  3I4N C;  3HOX K;  1IW7 A;  3S17 C;  3GTJ K;  2R93 K;  3M4O C;  4BBS C;  1BDF A;  4YFN A;  3H0G K;  4A3B C;  2YU9 K;  3I4M K;  4X6A K;  2NVX C;  2NVT C;  1YNJ A;  1YNN A;  2B63 C;  4A3G C;  3H3V L;  2VUM K;  4QJV B;  3S15 K;  5IYB C;  3S16 K;  3S2H C;  3HOZ C;  1TWG K;  4QIW L;  4C2M K;  4A3C K;  1I6H K;  3HKZ L;  3K7A C;  2E2I C;  4Y7N K;  3S1Q K;  2JA7 C;  3S2D K;  3PO2 K;  3M3Y K;  3CQZ K;  5C4J C;  3FKI C;  4A3M K;  4MEX A;  5C4X C;  1R9T C;  1K83 K;  1TWC K;  3I4N K;  3GTK K;  2A69 A;  4YG2 A;  3HOU C;  1I3Q K;  3GTG C;  4BBS K;  2PMZ D;  1TWF C;  4BY7 C;  2PPB A;  2E2H K;  2NVT K;  5C3E C;  3RZO C;  2Y0S D;  4OIR A;  2JA6 C;  4A93 C;  4C3J C;  5M5W K;  4XSZ A;  1Y1W C;  2R92 K;  1WCM C;  5IYB K;  4LLG A;  1I6V A;  2JA8 C;  3K7A K;  4A3D C;  2A6E A;  3GTO C;  3RZD C;  3S1M K;  5C44 K;  3GTP K;  1SMY A;  2E2J K;  1ZYR A;  5M3M K;  5IP9 C;  5IYD K;  2R7Z C;  2WAQ D;  5D4D A;  5TMC A;  3HOV K;  5FLM K;  5TMF A;  1TWA K;  4A3E K;  4LK1 A;  4MEY A;  5IP7 C;  4BBR K;  4BY1 C;  4C3H K;  2Y0S L;  4AYB L;  4C3I C;  4A3L C;  2WB1 L;  4A3I K;  2CW0 A;  3S1R K;  3GTM K;  4Y52 K;  1SFO C;  3GTL C;  1Y1V C;  3S17 K;  1TWH C;  3M4O K;  4BXX C;  4A3B K;  2NVY C;  2NVX K;  2B63 K;  4A3G K;  4G7O A;  3HOY C;  4OIO A;  4A3K C;  4KMU A;  3PO3 C;  3S1N C;  3EQL A;  4NOI A;  3S14 C;  4Y7N C;  5C44 C;  4C3H C;  3S2H K;  3HOZ K;  4LJZ A;  1I50 C;  3GTQ C;  2E2I K;  2JA7 K;  2JA5 C;  3HOW C;  2NVQ C;  4Q5S A;  3FKI K;  4A3J C;  5C4J K;  4G7Z A;  3HOX C;  5C4X K;  1R9T K;  4Q4Z A;  3GTJ C;  3HOU K;  3GTG K;  2O5J A;  4OIQ A;  1TWF K;  3H0G C;  4X6A C;  4XSX A;  2YU9 C;  3H3V D;  3I4M C;  2PMZ L;  5C3E K;  3RZO K;  4BY7 K;  1HQM A;  2JA6 K;  4A93 K;  4C3J K;  4QIW D;  3WOD A;  2VUM C;  1Y1W K;  1WCM K;  3HKZ D;  3S15 C;  3S16 C;  1TWG C;  4LK0 A;  4C2M C;  4A3F C;  4A3C C;  1I6H C;  5M3F K;  2JA8 K;  3GTO K;  2O5I A;  5IYC C;  3S1Q C;  3RZD K;  4A3D K;  3S2D C;  3M3Y C;  3PO2 C;  3CQZ C;  4A3M C;  4ZH4 A;  1K83 C;  1TWC C;  2R93 C;  4KN7 A;  3GTK C;  1I3Q C;  5IP9 K;  2R7Z K;  2BE5 A;  4OIP A;  2E2H C;  2WAQ L;  3DXJ A;  4XLN A;  2PA8 D;  5IP7 K;  4BY1 K;  4JK1 A;  4C3I K;  2R92 C;  5FJ8 K;  4A3L K;  4OIN A;  1SFO K;  3GTL K;  1XPP A;  4GZY A;  1Y1V K;  1TWH K;  4QJV A;  4A3F K;  5IYC K;  3S1M C;  3GTP C;  4BXX K;  2NVY K;  4KN4 A;  2E2J C;  3HOY K;  5M5X K;  4XLP A;  4A3K K;  5IYD C;  2A6H A;  3PO3 K;  3S1N K;  3S14 K;  3HOV C;  5FLM C;  4MQ9 A; 
#chains in the Genus database with same CATH topology
 2JA6 A;  2WB1 D;  4GTF A;  1WCM A;  3G4C A;  2PA8 L;  1BGW A;  4GTE A;  4YFK A;  3GTJ K;  3GEE A;  2NVT C;  2B63 C;  4LOW A;  3H0G A;  5JVG S;  3S15 K;  1TWG K;  4QIW L;  4A3C K;  1I6H K;  3HKZ L;  2CFA A;  3PO2 K;  1EH1 A;  3AH5 A;  5C4J C;  4WF9 S;  5IOS A;  2JH3 A;  5C4X C;  1R9T C;  2GAH C;  3LYW A;  3GTK K;  1I3Q K;  3GTG C;  4BBS K;  1K83 A;  5CHP A;  3CAG A;  1IQ0 A;  4A93 C;  1VGX A;  4XSZ A;  1WOP A;  5TJ3 A;  3N3Y A;  1ZVU A;  3BP3 A;  3GEH A;  3GTP A;  1EK8 A;  2YU9 A;  2R7Z C;  5TMC A;  4GTB A;  3CF5 S;  5TMF A;  1F7U A;  4LK1 A;  4MEY A;  1XZQ A;  1ZQ1 C;  3NUH A;  1WQH A;  2Y0S L;  4WFA S;  4C3I C;  3AD7 C;  4AYB L;  4A3I K;  4U67 S;  1UV7 A;  1DCH A;  1L0W A;  4BXX C;  2NVY C;  4A3G K;  4G7O A;  4OIO A;  4KMU A;  1J6X A;  3PO3 C;  1F7V A;  3EQL A;  4Y7N C;  1WSR A;  4C3H C;  1O24 A;  3S2H K;  3HOZ K;  1O25 A;  2FQO A;  3TFJ A;  2JA5 C;  4AH6 A;  3HOW C;  4A3J C;  3A8J A;  2GSU A;  2O5J A;  1WOS A;  4X6A C;  4BY7 K;  3H3V D;  2PMZ L;  5EGE A;  5C3E K;  1XZQ B;  3RZO K;  1HQM A;  3GTG A;  2JA6 K;  2VUM C;  1WCM K;  3GIR A;  4LK0 A;  4C2M C;  2GSN A;  3RZD K;  3S1Q C;  3S2D C;  2V6S A;  2FQT A;  2R93 C;  1B4A A;  3JST A;  3N0C A;  5IP9 K;  2WAQ L;  3DXJ A;  3ORE A;  1JOE A;  4BY1 K;  5FJ8 K;  1VRQ C;  1YCL A;  4A3F K;  4QJV A;  5IYC K;  3FKI A;  3S1M C;  4WFN S;  4KN4 A;  3GEI A;  2E2J C;  3HOY K;  1TWF A;  2NVY A;  4IOC S;  3AD8 C;  5FLM C;  5EGH A;  3GTQ K;  1TWA C;  4A3E C;  3ERE D;  1O27 A;  4Y52 C;  2V6T A;  3GTM C;  5M5Y K;  3HOX K;  1WQF A;  3S17 C;  3T01 A;  3M4O C;  1WOO A;  4A3B C;  1J6W A;  1KQ4 A;  2YU9 K;  1YNJ A;  3TTG A;  4WIL A;  1INN A;  1ZXO A;  3IPJ A;  4QJV B;  5IYB C;  4KMA A;  2E2I C;  2JA7 C;  3M3Y K;  2EBB A;  4A3M K;  1Y1V A;  1SFO A;  3GTL A;  1TWH A;  4MEX A;  2A69 A;  4YG2 A;  4FZB A;  2ZUF A;  2PPB A;  1O2F B;  2P8T A;  2NVT K;  3FOE A;  4OIR A;  3TFI A;  4C3J C;  1Y1W C;  1I50 A;  3V4G A;  2L5N A;  5JVH S;  3LPX A;  4LLG A;  4KMH A;  2A6E A;  3GTO C;  5IOQ A;  4G0V A;  3HXA A;  4KAR A;  3FOF A;  1SMY A;  4J3N A;  4WJ3 M;  5M3M K;  3AQO A;  1J98 A;  5IYD K;  5JVO A;  4KDD A;  4BBR K;  2XCQ A;  4A3L C;  1VLO A;  4GT9 A;  3MML B;  3S1R K;  3CQZ A;  1XZP A;  1TWC A;  1JVI A;  2NVX K;  2E2H A;  4GFQ A;  4NOI A;  5C44 C;  1BS2 A;  3G4A A;  2R92 A;  3LAP A;  5DM7 S;  2GAG C;  3FKI K;  3GSI A;  4P5B A;  2JA7 A;  2PHC B;  4KM8 A;  3GTJ C;  3HOU K;  2ZUE A;  4OIQ A;  1TWF K;  4G0W A;  4XSX A;  2CFA B;  3SZZ A;  4QIW D;  3Q3Q A;  3HKZ D;  3S15 C;  1XZP B;  1TWG C;  4A3C C;  1I6H C;  1O26 A;  5M3F K;  2JA8 K;  4A3D K;  2O5I A;  3PO2 C;  2V6U A;  4ZH4 A;  1G51 A;  4KN7 A;  3GTK C;  1C0A A;  1I3Q C;  1X31 C;  1IL2 A;  2BE5 A;  4IO9 S;  2B63 A;  4WFB S;  4PAA A;  2RGR A;  5IP7 K;  1FEU A;  1J6V A;  3S0X A;  4OIN A;  1SFO K;  3GTL K;  1XPP A;  1Y1V K;  1TWH K;  2GSO A;  2ZFZ A;  1R9T A;  3PIP S;  1IS1 A;  4A3K K;  3S1N K;  3S14 K;  4MQ9 A;  1I50 K;  3VA7 A;  4AYB D;  3FHZ A;  4G7H A;  1O2B A;  2NVQ K;  4A3I C;  1AB4 A;  3I4N C;  1BDF A;  3H0G K;  3A8K A;  3I4M K;  3GTJ A;  4GTA A;  4M1X A;  4A3G C;  2R7Z A;  3N0B A;  1ISE A;  5HL7 S;  3S16 K;  3S2H C;  3HOZ C;  3K7A C;  4KC6 A;  2P5M A;  3CQZ K;  1K83 K;  1TWC K;  2PMZ D;  5IOR A;  4KB4 A;  1B4B A;  4KMD A;  4BY7 C;  2E2H K;  3GTK A;  5C3E C;  3RZO C;  2JA6 C;  5M5W K;  2R92 K;  1WCM C;  5IYB K;  2ZJR S;  1VJE A;  2JA5 A;  3RZD C;  3GTP K;  2KPU A;  1WIH A;  1JQW A;  5IP9 C;  2WAQ D;  3HOV K;  4O2D A;  2VUM A;  2KXY A;  4BY1 C;  3BP8 C;  2WB1 L;  4BLA A;  2Y3P A;  4LQY A;  2D6F C;  1O29 A;  2RH6 A;  1EQR A;  1ZBS A;  2R93 A;  2B63 K;  3HOY C;  3TFH A;  4G0U A;  4LJZ A;  3GTQ C;  3PIO S;  1EI6 A;  5C4J K;  4KAT A;  4G7Z A;  3HOX C;  4BKW A;  5C4X K;  1R9T K;  4Q4Z A;  1WOR A;  5HL8 A;  3GTG K;  2W7V A;  2YU9 C;  1DCO A;  1PJ5 A;  3L4K A;  3LAJ A;  4A93 K;  1TWA A;  4P9S A;  3AQP A;  3GTM A;  3M3Y C;  4A3M C;  4PAB A;  4RMF A;  1IBA A;  4C45 A;  1YX2 A;  2R7Z K;  4XLN A;  2PA8 D;  1F93 A;  4JK1 A;  4LR2 A;  4C3I K;  1XXB A;  2E2I A;  4GZY A;  5IOT A;  3DLL S;  3GDZ A;  4KAW X;  4BXX K;  2NVY K;  4GTL A;  4FM9 A;  1IE0 A;  4XLP A;  5IYD C;  3PO3 K;  4Y7N K;  4C3H K;  3L4J A;  4YFX A;  5CJ9 A;  1Y1W A;  4BBR C;  2JA5 K;  3HOW K;  3GTQ A;  4A3J K;  2XCO A;  3S1R C;  4GTD A;  1XXA A;  2A68 A;  3GTO A;  1IW7 A;  1USM A;  4BBS C;  4YFN A;  1VH2 A;  4DDQ A;  1EFW A;  4X6A K;  2NVX C;  2XCR B;  1YNN A;  3H3V L;  1WSV A;  2VUM K;  1HI9 A;  3AD9 C;  1DCP A;  4C2M K;  4BLB A;  3S1Q K;  3S2D K;  3FKI C;  3A8I A;  3SZY A;  1O2A A;  3I4N K;  2R93 K;  3HOU C;  1TWF C;  4WJ4 A;  2Y0S D;  1O28 A;  4XCH A;  2ZJP S;  1I6V A;  2JA8 C;  3K7A K;  4A3D C;  3S1M K;  1WQG A;  2E2J K;  2KWA A;  1ZYR A;  4ILD A;  5D4D A;  5FLM K;  5L46 A;  1PJ6 A;  1TWA K;  4A3E K;  5IP7 C;  1TWG A;  4Y52 K;  2CW0 A;  3GTM K;  1SFO C;  3GTL C;  1Y1V C;  3S17 K;  3OPF A;  1TWH C;  3M4O K;  4A3B K;  1I3Q A;  1DD5 A;  1USO A;  4A3K C;  2NVX A;  3S1N C;  3S14 C;  3T00 A;  1I50 C;  2E2I K;  1V5V A;  2JA7 K;  2NVQ C;  4Q5S A;  4P5A A;  3H0G C;  3I4M C;  4WCE S;  4C3J K;  3WOD A;  4GTC A;  1Y1W K;  4IOA S;  3S16 C;  5JFE A;  4A3F C;  1BJT A;  3GTO K;  5IYC C;  5DM6 S;  4KM9 A;  3CQZ C;  3OEP A;  1K83 C;  1TWC C;  4KB2 A;  5E68 A;  3ADA C;  4OIP A;  2E2H C;  1F9N A;  3QX3 A;  5HQH A;  4A3L K;  2R92 C;  4KAS A;  3T02 A;  2L3U A;  3GTP C;  1XXC A;  2ZJQ S;  3BUE A;  1GE9 A;  1PJ7 A;  2KQ1 A;  5M5X K;  2A6H A;  1RU0 A;  3HOV C;  5C44 K; 
#chains in the Genus database with same CATH homology
 4YFX A;  3GTQ K;  1TWA C;  4A3E C;  1I50 K;  4AYB D;  2WB1 D;  4BBR C;  2JA5 K;  4G7H A;  2PA8 L;  4Y52 C;  2NVQ K;  4A3J K;  3HOW K;  4A3I C;  3GTM C;  3S1R C;  5M5Y K;  4YFK A;  2A68 A;  3I4N C;  3HOX K;  1IW7 A;  3S17 C;  3GTJ K;  2R93 K;  3M4O C;  4BBS C;  1BDF A;  4YFN A;  3H0G K;  4A3B C;  2YU9 K;  3I4M K;  4X6A K;  2NVX C;  2NVT C;  1YNJ A;  1YNN A;  2B63 C;  4A3G C;  3H3V L;  2VUM K;  4QJV B;  3S15 K;  5IYB C;  3S16 K;  3S2H C;  3HOZ C;  1TWG K;  4QIW L;  4C2M K;  4A3C K;  1I6H K;  3HKZ L;  3K7A C;  2E2I C;  4Y7N K;  3S1Q K;  2JA7 C;  3S2D K;  3PO2 K;  3M3Y K;  3CQZ K;  5C4J C;  3FKI C;  4A3M K;  4MEX A;  5C4X C;  1R9T C;  1K83 K;  1TWC K;  3I4N K;  3GTK K;  2A69 A;  4YG2 A;  3HOU C;  1I3Q K;  3GTG C;  4BBS K;  2PMZ D;  1TWF C;  4BY7 C;  2PPB A;  2E2H K;  2NVT K;  5C3E C;  3RZO C;  2Y0S D;  4OIR A;  2JA6 C;  4A93 C;  4C3J C;  5M5W K;  4XSZ A;  1Y1W C;  2R92 K;  1WCM C;  5IYB K;  4LLG A;  1I6V A;  2JA8 C;  3K7A K;  4A3D C;  2A6E A;  3GTO C;  3RZD C;  3S1M K;  5C44 K;  3GTP K;  1SMY A;  2E2J K;  1ZYR A;  5M3M K;  5IP9 C;  5IYD K;  2R7Z C;  2WAQ D;  5D4D A;  5TMC A;  3HOV K;  5FLM K;  5TMF A;  1TWA K;  4A3E K;  4LK1 A;  4MEY A;  5IP7 C;  4BBR K;  4BY1 C;  4C3H K;  2Y0S L;  4AYB L;  4C3I C;  4A3L C;  2WB1 L;  4A3I K;  2CW0 A;  3S1R K;  3GTM K;  4Y52 K;  1SFO C;  3GTL C;  1Y1V C;  3S17 K;  1TWH C;  3M4O K;  4BXX C;  4A3B K;  2NVY C;  2NVX K;  2B63 K;  4A3G K;  4G7O A;  3HOY C;  4OIO A;  4A3K C;  4KMU A;  3PO3 C;  3S1N C;  3EQL A;  4NOI A;  3S14 C;  4Y7N C;  5C44 C;  4C3H C;  3S2H K;  3HOZ K;  4LJZ A;  1I50 C;  3GTQ C;  2E2I K;  2JA7 K;  2JA5 C;  3HOW C;  2NVQ C;  4Q5S A;  3FKI K;  4A3J C;  5C4J K;  4G7Z A;  3HOX C;  5C4X K;  1R9T K;  4Q4Z A;  3GTJ C;  3HOU K;  3GTG K;  2O5J A;  4OIQ A;  1TWF K;  3H0G C;  4X6A C;  4XSX A;  2YU9 C;  3H3V D;  3I4M C;  2PMZ L;  5C3E K;  3RZO K;  4BY7 K;  1HQM A;  2JA6 K;  4A93 K;  4C3J K;  4QIW D;  3WOD A;  2VUM C;  1Y1W K;  1WCM K;  3HKZ D;  3S15 C;  3S16 C;  1TWG C;  4LK0 A;  4C2M C;  4A3F C;  4A3C C;  1I6H C;  5M3F K;  2JA8 K;  3GTO K;  2O5I A;  5IYC C;  3S1Q C;  3RZD K;  4A3D K;  3S2D C;  3M3Y C;  3PO2 C;  3CQZ C;  4A3M C;  4ZH4 A;  1K83 C;  1TWC C;  2R93 C;  4KN7 A;  3GTK C;  1I3Q C;  5IP9 K;  2R7Z K;  2BE5 A;  4OIP A;  2E2H C;  2WAQ L;  3DXJ A;  4XLN A;  2PA8 D;  5IP7 K;  4BY1 K;  4JK1 A;  4C3I K;  2R92 C;  5FJ8 K;  4A3L K;  4OIN A;  1SFO K;  3GTL K;  1XPP A;  4GZY A;  1Y1V K;  1TWH K;  4QJV A;  4A3F K;  5IYC K;  3S1M C;  3GTP C;  4BXX K;  2NVY K;  4KN4 A;  2E2J C;  3HOY K;  5M5X K;  4XLP A;  4A3K K;  5IYD C;  2A6H A;  3PO3 K;  3S1N K;  3S14 K;  3HOV C;  5FLM C;  4MQ9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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