3S2HC

Rna polymerase ii initiation complex with a 6-nt rna containing a 2[prime]-iodo atp
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s2hC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s2hC01
3S2HC 5M3MK 3HOXC 1Y1VK 5M5WK 2R93C 2NVQC 3S16K 3S1RC 4A3LC 4NOIA 4GZYA 4YFXA 3DXJA 3H3VL 3PO3K 4A3FC 4MEYA 4LJZA 3GTPC 4Y7NC 4A3DK 3S1NC 3S1QC 2WAQL 5IYCK 2E2IK 3HOXK 2CW0A 4Q4ZA 4XLNA 4OIPA 1R9TC 3HOZC 4C2MC 2PMZL 5IP7K 2NVQK 2NVYC 4BXXK 5C4JC 5TMFA 2PMZD 4YG2A 3I4MK 4A3CK 3WODA 3PO2C 4BBRC 2JA6C 3S1MC 4A3DC 1YNNA 4QIWL 4A93K 3HKZL 4C3HK 3EQLA 1TWAC 5IP7C 4BXXC 3GTOC 3HOUC 4A3GC 1R9TK 4BY7C 1TWFC 1I50C 2Y0SD 4Y7NK 2E2HK 3GTQK 4BBRK 2JA6K 3S1MK 2B63C 4A3BC 5FLMK 2NVYK 1TWHC 2A69A 2PA8D 5IP9K 4BY7K 2WAQD 2Y0SL 3I4NC 3RZOK 1XPPA 4X6AK 3GTQC 4C3HC 4QJVB 5IYBC 2R93K 3GTGC 5M3FK 1TWCC 4A3KC 4Q5SA 1WCMK 3K7AK 3PO3C 4OIOA 3M3YK 3M4OC 2A6HA 2E2HC 4A3IC 4C3JC 1SFOC 3HKZD 1I6VA 4YFNA 2R92C 3FKIK 4KN7A 4QJVA 4XSZA 5FLMC 4BY1K 4A3EC 2JA7K 4A3JC 2NVTC 4C3IK 2BE5A 3HOZK 4A3BK 1I6HK 3M3YC 4G7OA 3GTLC 3HOYC 3M4OK 4LK1A 3PO2K 1BDFA 5IYBK 2VUMK 4G7ZA 2PA8L 3S17C 1WCMC 1I3QK 5C4XK 1ZYRA 4G7HA 2YU9C 3S15C 3S2HK 4A93C 2E2IC 4OIQA 2E2JC 2NVTK 4A3LK 3GTKK 1Y1WK 5IP9C 1TWHK 3S14C 2O5JA 3HOYK 5C4JK 2YU9K 3S15K 4MQ9A 2O5IA 4A3MK 2R7ZK 1YNJA 1TWAK 3S17K 5C3EK 4Y52K 2JA5C 5C44K 3K7AC 1TWCK 4A3KK 3H0GC 4JK1A 1I50K 4A3CC 2PPBA 2NVXK 3HOVK 4BY1C 5M5XK 2WB1D 1SMYA 4C3IC 1Y1WC 4A3JK 3S1RK 3HOUK 3CQZC 5C44C 4BBSC 1TWGK 2JA5K 1TWFK 4AYBL 3S14K 4LLGA 3GTLK 4XSXA 2JA8K 3S2DK 2B63K 1K83K 4OINA 4A3MC 2R7ZC 3HOVC 3GTMC 4Y52C 3GTGK 4C2MK 2A6EA 5M5YK 1TWGC 3CQZK 4BBSK 1HQMA 3GTJC 3H3VD 3RZOC 3I4MC 4KMUA 4X6AC 2JA8C 3S2DC 4C3JK 1K83C 2E2JK 3FKIC 1Y1VC 3GTKC 3GTOK 4A3GK 3HOWK 5IYDK 4OIRA 3RZDC 1IW7A 3GTJK 4A3IK 1SFOK 4A3FK 3GTPK 4XLPA 4ZH4A 2JA7C 2R92K 5IYCC 4QIWD 2WB1L 3GTMK 3S1QK 2VUMC 4A3EK 4LK0A 3S16C 5C3EC 5TMCA 4AYBD 1I6HC 5IYDC 4YFKA 3HOWC 1I3QC 5C4XC 3H0GK 5D4DA 2A68A 5FJ8K 3RZDK 4KN4A 3I4NK 3S1NK 4MEXA 2NVXC
chains in the Genus database with same CATH superfamily
3HOXC 4LOWA 1O25A 1DCOA 5CHPA 5M5WK 3ADAC 3S1RC 3DXJA 3H3VL 1XXAA 3S1QC 4P9SA 3FHZA 1ISEA 2CW0A 2RH6A 4BXXK 2PMZL 2NVQK 3AQPA 5TMFA 3LAJA 4YG2A 3I4MK 4BBRC 4A3DC 3HKZL 3EQLA 1TWAC 2W7VA 2FQTA 5IP7C 3HOUC 4BKWA 4BY7C 3GTJA 4C45A 2JA6K 1G51A 3BUEA 1Y1VA 3N3YA 3FKIA 4KM8A 4FZBA 1TWHC 2WAQD 3RZOK 3ERED 1GE9A 1HI9A 4A3KC 3K7AK 1JOEA 1O29A 1XXBA 4OIOA 4WJ4A 1BS2A 5CJ9A 3AH5A 3HKZD 1EH1A 4KN7A 4QJVA 3HOZK 2JA7A 4U67S 1WQFA 1TWGA 4G7OA 3GTLC 3HOYC 3M4OK 4WILA 2EBBA 4G7ZA 1XZPA 5C4XK 3SZZA 4G7HA 2YU9C 3A8KA 3HOYK 2JH3A 2KPUA 2R7ZK 2O5IA 5JFEA 2P5MA 1TWAK 1YX2A 1JVIA 2JA5C 4GFQA 4A3CC 2XCQA 4GT9A 4P5AA 2PPBA 2NVXK 2V6SA 3AD7C 3OEPA 4C3IC 2P8TA 3TTGA 4A3JK 1TWGK 3CAGA 1O27A 4KMAA 4LLGA 1USOA 1YCLA 4XSXA 2FQOA 2B63K 4OINA 2R7ZC 5JVHS 3GTMC 4C2MK 2D6FC 5M5YK 4BBSK 1USMA 3GDZA 3FOEA 3S2DC 1Y1VC 2E2HA 4A3GK 4OIRA 1WORA 3RZDC 1TWFA 4IOCS 1SFOK 4WFBS 1XXCA 1R9TA 2JA7C 2R92K 3BP8C 3GTMK 3IPJA 4KC6A 4LK0A 3S16C 3BP3A 3N0BA 5IYDC 5C4XC 5IOSA 1TWCA 3I4NK 3JSTA 1Y1VK 4GZYA 4YFXA 1I3QA 3PO3K 5JVOA 1VLOA 4LJZA 3G4CA 4LR2A 2KWAA 3HOXK 1B4BA 4OIPA 5C4JC 4WCES 4A3CK 3WODA 3PO2C 3S1MC 4GTDA 1WSRA 4BXXC 3AD8C 3GTOC 3GTPA 1I50C 3PIOS 3GTMA 4BBRK 2B63C 2PA8D 5IP9K 4BY7K 3CQZA 5IYBC 2R93K 5L46A 1WCMK 1O28A 4RMFA 2ZJRS 5HL7S 1WIHA 2A6HA 1WQHA 1IL2A 1SFOC 4C3JC 2GSUA 4YFNA 3FKIK 2R92C 4XSZA 2JA7K 4A93K 3N0CA 4LK1A 2R7ZA 5IYBK 1K83A 2PA8L 1WCMC 1I3QK 1DCHA 3G4AA 3FOFA 3S2HK 4A93C 4OIQA 2E2JC 4KAWX 2E2IA 3T02A 3GTKK 4GTCA 3S14C 2O5JA 3S0XA 5C4JK 1F93A 1VH2A 2YU9K 3OREA 1WOPA 1FEUA 4FM9A 4MQ9A 2PHCB 3QX3A 1TWCK 4KB4A 5TJ3A 1I50K 3H0GA 4KARA 4BY1C 5M5XK 1BGWA 2WB1D 3S1RK 3CQZC 2JA5K 3S14K 1TWFK 1WCMA 2JA8K 1WQGA 1K83K 2GSOA 2A6EA 1TWGC 1L0WA 4G0WA 4X6AC 3I4MC 4PABA 4C3JK 3FKIC 3GIRA 4BLAA 3T01A 3HOWK 4WF9S 3HXAA 1IW7A 5EGEA 4DDQA 4XCHA 4XLPA 4ZH4A 4QIWD 3GTQA 4O2DA 5C3EC 2JA6A 4GTAA 3H0GK 1I3QC 1VGXA 3RZDK 4WJ3M 3OPFA 3S1NK 2Y0SL 1IBAA 3S2HC 3GTGA 1X31C 3AD9C 1ZXOA 3S16K 2V6TA 4NOIA 1XZQB 4P5BA 4KASA 1F9NA 2VUMA 4PAAA 3LYWA 3HOZC 4XLNA 1R9TC 2L3UA 2NVXA 2NVYC 1I50A 2Y3PA 1RU0A 3L4KA 1EQRA 1TWAA 3SZYA 1J6VA 1TWFC 4KATA 2E2HK 3GTQK 3S1MK 3GTKA 1EI6A 4A3BC 1VRQC 5DM6S 1JQWA 2NVYK 2A69A 1XZQA 1DD5A 4G0UA 4X6AK 1XPPA 4KM9A 4QJVB 5M3FK 3M3YK 3A8JA 3MMLB 2E2HC 1I6VA 1IS1A 1DCPA 4A3BK 4A3JC 2NVTC 4J3NA 2BE5A 4C3IK 4G0VA 1EK8A 2L5NA 1AB4A 2VUMK 2XCOA 3GSIA 3CF5S 1O2AA 3S15C 1J6WA 5HQHA 1Y1WA 4WFAS 1V5VA 2KXYA 2NVTK 4GTLA 4A3LK 1TWHK 4KDDA 1WOOA 2YU9A 1J98A 2KQ1A 1SFOA 5C44K 3K7AC 4A3KK 3A8IA 4GTBA 4JK1A 1KQ4A 3HOVK 1SMYA 2R92A 4AYBL 3GEHA 1EFWA 1INNA 3GTLK 4GTFA 1ZBSA 4GTEA 3CQZK 2ZUFA 1HQMA 3GTJC 3H3VD 1IE0A 5EGHA 5HL8A 2JA8C 1K83C 3TFHA 2B63A 3VA7A 3GTOK 1F7UA 4A3IK 4A3FK 3GTPK 5IYCC 2WB1L 2VUMC 4A3EK 5TMCA 4AYBD 1I6HC 2ZFZA 3HOWC 4YFKA 1O2BA 1TWHA 5D4DA 5DM7S 5FJ8K 4KN4A 2GSNA 4MEXA 2NVXC 5M3MK 1BJTA 2R93C 1J6XA 2NVQC 3TFIA 4A3LC 4A3FC 4MEYA 3GTPC 4Y7NC 4A3DK 3S1NC 2WAQL 5IYCK 2E2IK 4BLBA 5IOQA 3T00A 4Q4ZA 5IP7K 4C2MC 1PJ6A 1VJEA 1ZQ1C 2PMZD 2JA6C 4QIWL 1YNNA 4C3HK 2GAGC 1R9TK 4A3GC 3GEEA 1IQ0A 1O24A 2Y0SD 4Y7NK 4IOAS 2R93A 5FLMK 3NUHA 3GEIA 1PJ7A 3I4NC 3GTQC 4C3HC 1ZVUA 3GTGC 1TWCC 4Q5SA 1UV7A 3PO3C 3M4OC 4KMHA 4A3IC 1O2FB 4BY1K 1XZPB 5FLMC 4A3EC 1C0AA 3LAPA 1WSVA 3Q3QA 1I6HK 3M3YC 2ZUEA 3PO2K 5JVGS 2JA5A 1BDFA 2GAHC 3S17C 4KMDA 1ZYRA 1O26A 2E2IC 3PIPS 1Y1WK 5IP9C 3S15K 1WOSA 4A3MK 2CFAB 3S17K 1YNJA 5C3EK 4Y52K 3H0GC 4AH6A 2V6UA 1PJ5A 3TFJA 5E68A 1F7VA 3AQOA 1B4AA 3LPXA 4IO9S 2RGRA 1Y1WC 3HOUK 4BBSC 5C44C 3V4GA 2ZJPS 4LQYA 3DLLS 3S2DK 5IORA 3HOVC 4A3MC 4Y52C 3GTGK 2XCRB 2ZJQS 4KB2A 3RZOC 2CFAA 4KMUA 2E2JK 3GTKC 3L4JA 5IYDK 3GTLA 3GTJK 4WFNS 3GTOA 5IOTA 3S1QK 4M1XA 4ILDA 2A68A 2NVYA
chains in the Genus database with same CATH topology
3S2HC 5M3MK 3HOXC 1Y1VK 5M5WK 2R93C 2NVQC 3S16K 3S1RC 4A3LC 4NOIA 4GZYA 4YFXA 3DXJA 3H3VL 3PO3K 4A3FC 4MEYA 4LJZA 3GTPC 4Y7NC 4A3DK 3S1NC 3S1QC 2WAQL 5IYCK 2E2IK 3HOXK 2CW0A 4Q4ZA 4XLNA 4OIPA 1R9TC 3HOZC 4C2MC 2PMZL 5IP7K 2NVQK 2NVYC 4BXXK 5C4JC 5TMFA 2PMZD 4YG2A 3I4MK 4A3CK 3WODA 3PO2C 4BBRC 2JA6C 3S1MC 4A3DC 1YNNA 4QIWL 4A93K 3HKZL 4C3HK 3EQLA 1TWAC 5IP7C 4BXXC 3GTOC 3HOUC 4A3GC 1R9TK 4BY7C 1TWFC 1I50C 2Y0SD 4Y7NK 2E2HK 3GTQK 4BBRK 2JA6K 3S1MK 2B63C 4A3BC 5FLMK 2NVYK 1TWHC 2A69A 2PA8D 5IP9K 4BY7K 2WAQD 2Y0SL 3I4NC 3RZOK 1XPPA 4X6AK 3GTQC 4C3HC 4QJVB 5IYBC 2R93K 3GTGC 5M3FK 1TWCC 4A3KC 4Q5SA 1WCMK 3K7AK 3PO3C 4OIOA 3M3YK 3M4OC 2A6HA 2E2HC 4A3IC 4C3JC 1SFOC 3HKZD 1I6VA 4YFNA 2R92C 3FKIK 4KN7A 4QJVA 4XSZA 5FLMC 4BY1K 4A3EC 2JA7K 4A3JC 2NVTC 4C3IK 2BE5A 3HOZK 4A3BK 1I6HK 3M3YC 4G7OA 3GTLC 3HOYC 3M4OK 4LK1A 3PO2K 1BDFA 5IYBK 2VUMK 4G7ZA 2PA8L 3S17C 1WCMC 1I3QK 5C4XK 1ZYRA 4G7HA 2YU9C 3S15C 3S2HK 4A93C 2E2IC 4OIQA 2E2JC 2NVTK 4A3LK 3GTKK 1Y1WK 5IP9C 1TWHK 3S14C 2O5JA 3HOYK 5C4JK 2YU9K 3S15K 4MQ9A 2O5IA 4A3MK 2R7ZK 1YNJA 1TWAK 3S17K 5C3EK 4Y52K 2JA5C 5C44K 3K7AC 1TWCK 4A3KK 3H0GC 4JK1A 1I50K 4A3CC 2PPBA 2NVXK 3HOVK 4BY1C 5M5XK 2WB1D 1SMYA 4C3IC 1Y1WC 4A3JK 3S1RK 3HOUK 3CQZC 5C44C 4BBSC 1TWGK 2JA5K 1TWFK 4AYBL 3S14K 4LLGA 3GTLK 4XSXA 2JA8K 3S2DK 2B63K 1K83K 4OINA 4A3MC 2R7ZC 3HOVC 3GTMC 4Y52C 3GTGK 4C2MK 2A6EA 5M5YK 1TWGC 3CQZK 4BBSK 1HQMA 3GTJC 3H3VD 3RZOC 3I4MC 4KMUA 4X6AC 2JA8C 3S2DC 4C3JK 1K83C 2E2JK 3FKIC 1Y1VC 3GTKC 3GTOK 4A3GK 3HOWK 5IYDK 4OIRA 3RZDC 1IW7A 3GTJK 4A3IK 1SFOK 4A3FK 3GTPK 4XLPA 4ZH4A 2JA7C 2R92K 5IYCC 4QIWD 2WB1L 3GTMK 3S1QK 2VUMC 4A3EK 4LK0A 3S16C 5C3EC 5TMCA 4AYBD 1I6HC 5IYDC 4YFKA 3HOWC 1I3QC 5C4XC 3H0GK 5D4DA 2A68A 5FJ8K 3RZDK 4KN4A 3I4NK 3S1NK 4MEXA 2NVXC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S2H C;  5M3M K;  3HOX C;  1Y1V K;  5M5W K;  2R93 C;  2NVQ C;  3S16 K;  3S1R C;  4A3L C;  4NOI A;  4GZY A;  4YFX A;  3DXJ A;  3H3V L;  3PO3 K;  4A3F C;  4MEY A;  4LJZ A;  3GTP C;  4Y7N C;  4A3D K;  3S1N C;  3S1Q C;  2WAQ L;  5IYC K;  2E2I K;  3HOX K;  2CW0 A;  4Q4Z A;  4XLN A;  4OIP A;  1R9T C;  3HOZ C;  4C2M C;  2PMZ L;  5IP7 K;  2NVQ K;  2NVY C;  4BXX K;  5C4J C;  5TMF A;  2PMZ D;  4YG2 A;  3I4M K;  4A3C K;  3WOD A;  3PO2 C;  4BBR C;  2JA6 C;  3S1M C;  4A3D C;  1YNN A;  4QIW L;  4A93 K;  3HKZ L;  4C3H K;  3EQL A;  1TWA C;  5IP7 C;  4BXX C;  3GTO C;  3HOU C;  4A3G C;  1R9T K;  4BY7 C;  1TWF C;  1I50 C;  2Y0S D;  4Y7N K;  2E2H K;  3GTQ K;  4BBR K;  2JA6 K;  3S1M K;  2B63 C;  4A3B C;  5FLM K;  2NVY K;  1TWH C;  2A69 A;  2PA8 D;  5IP9 K;  4BY7 K;  2WAQ D;  2Y0S L;  3I4N C;  3RZO K;  1XPP A;  4X6A K;  3GTQ C;  4C3H C;  4QJV B;  5IYB C;  2R93 K;  3GTG C;  5M3F K;  1TWC C;  4A3K C;  4Q5S A;  1WCM K;  3K7A K;  3PO3 C;  4OIO A;  3M3Y K;  3M4O C;  2A6H A;  2E2H C;  4A3I C;  4C3J C;  1SFO C;  3HKZ D;  1I6V A;  4YFN A;  2R92 C;  3FKI K;  4KN7 A;  4QJV A;  4XSZ A;  5FLM C;  4BY1 K;  4A3E C;  2JA7 K;  4A3J C;  2NVT C;  4C3I K;  2BE5 A;  3HOZ K;  4A3B K;  1I6H K;  3M3Y C;  4G7O A;  3GTL C;  3HOY C;  3M4O K;  4LK1 A;  3PO2 K;  1BDF A;  5IYB K;  2VUM K;  4G7Z A;  2PA8 L;  3S17 C;  1WCM C;  1I3Q K;  5C4X K;  1ZYR A;  4G7H A;  2YU9 C;  3S15 C;  3S2H K;  4A93 C;  2E2I C;  4OIQ A;  2E2J C;  2NVT K;  4A3L K;  3GTK K;  1Y1W K;  5IP9 C;  1TWH K;  3S14 C;  2O5J A;  3HOY K;  5C4J K;  2YU9 K;  3S15 K;  4MQ9 A;  2O5I A;  4A3M K;  2R7Z K;  1YNJ A;  1TWA K;  3S17 K;  5C3E K;  4Y52 K;  2JA5 C;  5C44 K;  3K7A C;  1TWC K;  4A3K K;  3H0G C;  4JK1 A;  1I50 K;  4A3C C;  2PPB A;  2NVX K;  3HOV K;  4BY1 C;  5M5X K;  2WB1 D;  1SMY A;  4C3I C;  1Y1W C;  4A3J K;  3S1R K;  3HOU K;  3CQZ C;  5C44 C;  4BBS C;  1TWG K;  2JA5 K;  1TWF K;  4AYB L;  3S14 K;  4LLG A;  3GTL K;  4XSX A;  2JA8 K;  3S2D K;  2B63 K;  1K83 K;  4OIN A;  4A3M C;  2R7Z C;  3HOV C;  3GTM C;  4Y52 C;  3GTG K;  4C2M K;  2A6E A;  5M5Y K;  1TWG C;  3CQZ K;  4BBS K;  1HQM A;  3GTJ C;  3H3V D;  3RZO C;  3I4M C;  4KMU A;  4X6A C;  2JA8 C;  3S2D C;  4C3J K;  1K83 C;  2E2J K;  3FKI C;  1Y1V C;  3GTK C;  3GTO K;  4A3G K;  3HOW K;  5IYD K;  4OIR A;  3RZD C;  1IW7 A;  3GTJ K;  4A3I K;  1SFO K;  4A3F K;  3GTP K;  4XLP A;  4ZH4 A;  2JA7 C;  2R92 K;  5IYC C;  4QIW D;  2WB1 L;  3GTM K;  3S1Q K;  2VUM C;  4A3E K;  4LK0 A;  3S16 C;  5C3E C;  5TMC A;  4AYB D;  1I6H C;  5IYD C;  4YFK A;  3HOW C;  1I3Q C;  5C4X C;  3H0G K;  5D4D A;  2A68 A;  5FJ8 K;  3RZD K;  4KN4 A;  3I4N K;  3S1N K;  4MEX A;  2NVX C; 
#chains in the Genus database with same CATH topology
 3HOX C;  4LOW A;  1O25 A;  1DCO A;  5CHP A;  5M5W K;  3ADA C;  3S1R C;  3DXJ A;  3H3V L;  1XXA A;  3S1Q C;  4P9S A;  3FHZ A;  1ISE A;  2CW0 A;  2RH6 A;  4BXX K;  2PMZ L;  2NVQ K;  3AQP A;  5TMF A;  3LAJ A;  4YG2 A;  3I4M K;  4BBR C;  4A3D C;  3HKZ L;  3EQL A;  1TWA C;  2W7V A;  2FQT A;  5IP7 C;  3HOU C;  4BKW A;  4BY7 C;  3GTJ A;  4C45 A;  2JA6 K;  1G51 A;  3BUE A;  1Y1V A;  3N3Y A;  3FKI A;  4KM8 A;  4FZB A;  1TWH C;  2WAQ D;  3RZO K;  3ERE D;  1GE9 A;  1HI9 A;  4A3K C;  3K7A K;  1JOE A;  1O29 A;  1XXB A;  4OIO A;  4WJ4 A;  1BS2 A;  5CJ9 A;  3AH5 A;  3HKZ D;  1EH1 A;  4KN7 A;  4QJV A;  3HOZ K;  2JA7 A;  4U67 S;  1WQF A;  1TWG A;  4G7O A;  3GTL C;  3HOY C;  3M4O K;  4WIL A;  2EBB A;  4G7Z A;  1XZP A;  5C4X K;  3SZZ A;  4G7H A;  2YU9 C;  3A8K A;  3HOY K;  2JH3 A;  2KPU A;  2R7Z K;  2O5I A;  5JFE A;  2P5M A;  1TWA K;  1YX2 A;  1JVI A;  2JA5 C;  4GFQ A;  4A3C C;  2XCQ A;  4GT9 A;  4P5A A;  2PPB A;  2NVX K;  2V6S A;  3AD7 C;  3OEP A;  4C3I C;  2P8T A;  3TTG A;  4A3J K;  1TWG K;  3CAG A;  1O27 A;  4KMA A;  4LLG A;  1USO A;  1YCL A;  4XSX A;  2FQO A;  2B63 K;  4OIN A;  2R7Z C;  5JVH S;  3GTM C;  4C2M K;  2D6F C;  5M5Y K;  4BBS K;  1USM A;  3GDZ A;  3FOE A;  3S2D C;  1Y1V C;  2E2H A;  4A3G K;  4OIR A;  1WOR A;  3RZD C;  1TWF A;  4IOC S;  1SFO K;  4WFB S;  1XXC A;  1R9T A;  2JA7 C;  2R92 K;  3BP8 C;  3GTM K;  3IPJ A;  4KC6 A;  4LK0 A;  3S16 C;  3BP3 A;  3N0B A;  5IYD C;  5C4X C;  5IOS A;  1TWC A;  3I4N K;  3JST A;  1Y1V K;  4GZY A;  4YFX A;  1I3Q A;  3PO3 K;  5JVO A;  1VLO A;  4LJZ A;  3G4C A;  4LR2 A;  2KWA A;  3HOX K;  1B4B A;  4OIP A;  5C4J C;  4WCE S;  4A3C K;  3WOD A;  3PO2 C;  3S1M C;  4GTD A;  1WSR A;  4BXX C;  3AD8 C;  3GTO C;  3GTP A;  1I50 C;  3PIO S;  3GTM A;  4BBR K;  2B63 C;  2PA8 D;  5IP9 K;  4BY7 K;  3CQZ A;  5IYB C;  2R93 K;  5L46 A;  1WCM K;  1O28 A;  4RMF A;  2ZJR S;  5HL7 S;  1WIH A;  2A6H A;  1WQH A;  1IL2 A;  1SFO C;  4C3J C;  2GSU A;  4YFN A;  3FKI K;  2R92 C;  4XSZ A;  2JA7 K;  4A93 K;  3N0C A;  4LK1 A;  2R7Z A;  5IYB K;  1K83 A;  2PA8 L;  1WCM C;  1I3Q K;  1DCH A;  3G4A A;  3FOF A;  3S2H K;  4A93 C;  4OIQ A;  2E2J C;  4KAW X;  2E2I A;  3T02 A;  3GTK K;  4GTC A;  3S14 C;  2O5J A;  3S0X A;  5C4J K;  1F93 A;  1VH2 A;  2YU9 K;  3ORE A;  1WOP A;  1FEU A;  4FM9 A;  4MQ9 A;  2PHC B;  3QX3 A;  1TWC K;  4KB4 A;  5TJ3 A;  1I50 K;  3H0G A;  4KAR A;  4BY1 C;  5M5X K;  1BGW A;  2WB1 D;  3S1R K;  3CQZ C;  2JA5 K;  3S14 K;  1TWF K;  1WCM A;  2JA8 K;  1WQG A;  1K83 K;  2GSO A;  2A6E A;  1TWG C;  1L0W A;  4G0W A;  4X6A C;  3I4M C;  4PAB A;  4C3J K;  3FKI C;  3GIR A;  4BLA A;  3T01 A;  3HOW K;  4WF9 S;  3HXA A;  1IW7 A;  5EGE A;  4DDQ A;  4XCH A;  4XLP A;  4ZH4 A;  4QIW D;  3GTQ A;  4O2D A;  5C3E C;  2JA6 A;  4GTA A;  3H0G K;  1I3Q C;  1VGX A;  3RZD K;  4WJ3 M;  3OPF A;  3S1N K;  2Y0S L;  1IBA A;  3S2H C;  3GTG A;  1X31 C;  3AD9 C;  1ZXO A;  3S16 K;  2V6T A;  4NOI A;  1XZQ B;  4P5B A;  4KAS A;  1F9N A;  2VUM A;  4PAA A;  3LYW A;  3HOZ C;  4XLN A;  1R9T C;  2L3U A;  2NVX A;  2NVY C;  1I50 A;  2Y3P A;  1RU0 A;  3L4K A;  1EQR A;  1TWA A;  3SZY A;  1J6V A;  1TWF C;  4KAT A;  2E2H K;  3GTQ K;  3S1M K;  3GTK A;  1EI6 A;  4A3B C;  1VRQ C;  5DM6 S;  1JQW A;  2NVY K;  2A69 A;  1XZQ A;  1DD5 A;  4G0U A;  4X6A K;  1XPP A;  4KM9 A;  4QJV B;  5M3F K;  3M3Y K;  3A8J A;  3MML B;  2E2H C;  1I6V A;  1IS1 A;  1DCP A;  4A3B K;  4A3J C;  2NVT C;  4J3N A;  2BE5 A;  4C3I K;  4G0V A;  1EK8 A;  2L5N A;  1AB4 A;  2VUM K;  2XCO A;  3GSI A;  3CF5 S;  1O2A A;  3S15 C;  1J6W A;  5HQH A;  1Y1W A;  4WFA S;  1V5V A;  2KXY A;  2NVT K;  4GTL A;  4A3L K;  1TWH K;  4KDD A;  1WOO A;  2YU9 A;  1J98 A;  2KQ1 A;  1SFO A;  5C44 K;  3K7A C;  4A3K K;  3A8I A;  4GTB A;  4JK1 A;  1KQ4 A;  3HOV K;  1SMY A;  2R92 A;  4AYB L;  3GEH A;  1EFW A;  1INN A;  3GTL K;  4GTF A;  1ZBS A;  4GTE A;  3CQZ K;  2ZUF A;  1HQM A;  3GTJ C;  3H3V D;  1IE0 A;  5EGH A;  5HL8 A;  2JA8 C;  1K83 C;  3TFH A;  2B63 A;  3VA7 A;  3GTO K;  1F7U A;  4A3I K;  4A3F K;  3GTP K;  5IYC C;  2WB1 L;  2VUM C;  4A3E K;  5TMC A;  4AYB D;  1I6H C;  2ZFZ A;  3HOW C;  4YFK A;  1O2B A;  1TWH A;  5D4D A;  5DM7 S;  5FJ8 K;  4KN4 A;  2GSN A;  4MEX A;  2NVX C;  5M3M K;  1BJT A;  2R93 C;  1J6X A;  2NVQ C;  3TFI A;  4A3L C;  4A3F C;  4MEY A;  3GTP C;  4Y7N C;  4A3D K;  3S1N C;  2WAQ L;  5IYC K;  2E2I K;  4BLB A;  5IOQ A;  3T00 A;  4Q4Z A;  5IP7 K;  4C2M C;  1PJ6 A;  1VJE A;  1ZQ1 C;  2PMZ D;  2JA6 C;  4QIW L;  1YNN A;  4C3H K;  2GAG C;  1R9T K;  4A3G C;  3GEE A;  1IQ0 A;  1O24 A;  2Y0S D;  4Y7N K;  4IOA S;  2R93 A;  5FLM K;  3NUH A;  3GEI A;  1PJ7 A;  3I4N C;  3GTQ C;  4C3H C;  1ZVU A;  3GTG C;  1TWC C;  4Q5S A;  1UV7 A;  3PO3 C;  3M4O C;  4KMH A;  4A3I C;  1O2F B;  4BY1 K;  1XZP B;  5FLM C;  4A3E C;  1C0A A;  3LAP A;  1WSV A;  3Q3Q A;  1I6H K;  3M3Y C;  2ZUE A;  3PO2 K;  5JVG S;  2JA5 A;  1BDF A;  2GAH C;  3S17 C;  4KMD A;  1ZYR A;  1O26 A;  2E2I C;  3PIP S;  1Y1W K;  5IP9 C;  3S15 K;  1WOS A;  4A3M K;  2CFA B;  3S17 K;  1YNJ A;  5C3E K;  4Y52 K;  3H0G C;  4AH6 A;  2V6U A;  1PJ5 A;  3TFJ A;  5E68 A;  1F7V A;  3AQO A;  1B4A A;  3LPX A;  4IO9 S;  2RGR A;  1Y1W C;  3HOU K;  4BBS C;  5C44 C;  3V4G A;  2ZJP S;  4LQY A;  3DLL S;  3S2D K;  5IOR A;  3HOV C;  4A3M C;  4Y52 C;  3GTG K;  2XCR B;  2ZJQ S;  4KB2 A;  3RZO C;  2CFA A;  4KMU A;  2E2J K;  3GTK C;  3L4J A;  5IYD K;  3GTL A;  3GTJ K;  4WFN S;  3GTO A;  5IOT A;  3S1Q K;  4M1X A;  4ILD A;  2A68 A;  2NVY A; 
#chains in the Genus database with same CATH homology
 3S2H C;  5M3M K;  3HOX C;  1Y1V K;  5M5W K;  2R93 C;  2NVQ C;  3S16 K;  3S1R C;  4A3L C;  4NOI A;  4GZY A;  4YFX A;  3DXJ A;  3H3V L;  3PO3 K;  4A3F C;  4MEY A;  4LJZ A;  3GTP C;  4Y7N C;  4A3D K;  3S1N C;  3S1Q C;  2WAQ L;  5IYC K;  2E2I K;  3HOX K;  2CW0 A;  4Q4Z A;  4XLN A;  4OIP A;  1R9T C;  3HOZ C;  4C2M C;  2PMZ L;  5IP7 K;  2NVQ K;  2NVY C;  4BXX K;  5C4J C;  5TMF A;  2PMZ D;  4YG2 A;  3I4M K;  4A3C K;  3WOD A;  3PO2 C;  4BBR C;  2JA6 C;  3S1M C;  4A3D C;  1YNN A;  4QIW L;  4A93 K;  3HKZ L;  4C3H K;  3EQL A;  1TWA C;  5IP7 C;  4BXX C;  3GTO C;  3HOU C;  4A3G C;  1R9T K;  4BY7 C;  1TWF C;  1I50 C;  2Y0S D;  4Y7N K;  2E2H K;  3GTQ K;  4BBR K;  2JA6 K;  3S1M K;  2B63 C;  4A3B C;  5FLM K;  2NVY K;  1TWH C;  2A69 A;  2PA8 D;  5IP9 K;  4BY7 K;  2WAQ D;  2Y0S L;  3I4N C;  3RZO K;  1XPP A;  4X6A K;  3GTQ C;  4C3H C;  4QJV B;  5IYB C;  2R93 K;  3GTG C;  5M3F K;  1TWC C;  4A3K C;  4Q5S A;  1WCM K;  3K7A K;  3PO3 C;  4OIO A;  3M3Y K;  3M4O C;  2A6H A;  2E2H C;  4A3I C;  4C3J C;  1SFO C;  3HKZ D;  1I6V A;  4YFN A;  2R92 C;  3FKI K;  4KN7 A;  4QJV A;  4XSZ A;  5FLM C;  4BY1 K;  4A3E C;  2JA7 K;  4A3J C;  2NVT C;  4C3I K;  2BE5 A;  3HOZ K;  4A3B K;  1I6H K;  3M3Y C;  4G7O A;  3GTL C;  3HOY C;  3M4O K;  4LK1 A;  3PO2 K;  1BDF A;  5IYB K;  2VUM K;  4G7Z A;  2PA8 L;  3S17 C;  1WCM C;  1I3Q K;  5C4X K;  1ZYR A;  4G7H A;  2YU9 C;  3S15 C;  3S2H K;  4A93 C;  2E2I C;  4OIQ A;  2E2J C;  2NVT K;  4A3L K;  3GTK K;  1Y1W K;  5IP9 C;  1TWH K;  3S14 C;  2O5J A;  3HOY K;  5C4J K;  2YU9 K;  3S15 K;  4MQ9 A;  2O5I A;  4A3M K;  2R7Z K;  1YNJ A;  1TWA K;  3S17 K;  5C3E K;  4Y52 K;  2JA5 C;  5C44 K;  3K7A C;  1TWC K;  4A3K K;  3H0G C;  4JK1 A;  1I50 K;  4A3C C;  2PPB A;  2NVX K;  3HOV K;  4BY1 C;  5M5X K;  2WB1 D;  1SMY A;  4C3I C;  1Y1W C;  4A3J K;  3S1R K;  3HOU K;  3CQZ C;  5C44 C;  4BBS C;  1TWG K;  2JA5 K;  1TWF K;  4AYB L;  3S14 K;  4LLG A;  3GTL K;  4XSX A;  2JA8 K;  3S2D K;  2B63 K;  1K83 K;  4OIN A;  4A3M C;  2R7Z C;  3HOV C;  3GTM C;  4Y52 C;  3GTG K;  4C2M K;  2A6E A;  5M5Y K;  1TWG C;  3CQZ K;  4BBS K;  1HQM A;  3GTJ C;  3H3V D;  3RZO C;  3I4M C;  4KMU A;  4X6A C;  2JA8 C;  3S2D C;  4C3J K;  1K83 C;  2E2J K;  3FKI C;  1Y1V C;  3GTK C;  3GTO K;  4A3G K;  3HOW K;  5IYD K;  4OIR A;  3RZD C;  1IW7 A;  3GTJ K;  4A3I K;  1SFO K;  4A3F K;  3GTP K;  4XLP A;  4ZH4 A;  2JA7 C;  2R92 K;  5IYC C;  4QIW D;  2WB1 L;  3GTM K;  3S1Q K;  2VUM C;  4A3E K;  4LK0 A;  3S16 C;  5C3E C;  5TMC A;  4AYB D;  1I6H C;  5IYD C;  4YFK A;  3HOW C;  1I3Q C;  5C4X C;  3H0G K;  5D4D A;  2A68 A;  5FJ8 K;  3RZD K;  4KN4 A;  3I4N K;  3S1N K;  4MEX A;  2NVX C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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