3S2HC

Rna polymerase ii initiation complex with a 6-nt rna containing a 2[prime]-iodo atp
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s2hC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s2hC01
3RZDC 3M4OC 3GTQK 5IP7C 2E2HK 4X6AK 4ZH4A 5IYBC 4BBSC 3S17K 3K7AC 4C2MK 1I6HC 3HOXC 2JA6C 4XLPA 3HOUK 3GTGC 2R7ZK 3S15K 4A3LC 2YU9K 5FLMC 2B63K 3S16K 4KMUA 3PO2C 1TWAK 2VUMK 2JA7C 2NVXC 2NVTK 4BXXC 4XSXA 3HOYK 3GTMK 2PA8D 2E2JC 2PA8L 3S1QK 1IW7A 4OIPA 4C3JC 4A3GC 5M3MK 3RZDK 3M4OK 1XPPA 5IP7K 2A6HA 4BY1C 4BBRC 3I4NC 3S14C 2E2IC 4A3DC 5IYBK 3HOZC 3K7AK 4G7ZA 3HOXK 2JA6K 4QIWD 4C3IC 4QIWL 2NVYK 3S2DC 4A3LK 2O5IA 2NVQC 5FLMK 2R92K 1SFOC 3HOVC 4G7OA 1WCMC 3PO2K 5IP9C 2JA7K 2NVXK 4BXXK 1R9TC 2E2JK 2Y0SD 2Y0SL 5M5WK 2CW0A 4C3JK 4A3GK 2WAQD 2WB1D 2WAQL 2WB1L 4YFNA 4A3JC 1Y1WC 1TWGC 4BBRK 3I4NK 3S14K 2E2IK 4A3DK 2JA5C 4LK1A 3HOZK 3CQZC 1YNJA 5TMFA 3GTLC 3S1NC 3S2DK 1K83C 3HKZD 5IYCC 1TWFC 3PO3C 2NVQK 3DXJA 1SFOK 1Y1VC 3HOVK 4A3KK 1WCMK 3M3YC 2A69A 5IP9K 5M3FK 4A3IC 1I6VA 1I50C 3H3VD 1R9TK 3H3VL 3I4MC 3HOWC 3GTJC 4MEYA 4BBSK 1Y1WK 1I3QC 3H0GC 5IYDC 4A3EC 1I6HK 2JA5K 3GTGK 4AYBD 3CQZK 4AYBL 4OIRA 4QJVB 3GTLK 3S1NK 4A93C 5C4XC 5IYCK 5D4DA 4A3CC 4LK0A 4Q5SA 4MEXA 4A3IK 3S1RC 3RZOC 1TWCC 1I50K 4Y7NC 3S2HC 4X6AC 3I4MK 3GTJK 4Q4ZA 5C4JC 4BY1K 4A3EK 4JK1A 5IYDK 5TMCA 5M5YK 4C3IK 4A3MC 2A6EA 4A3BC 3HKZL 1BDFA 3S17C 5FJ8K 4XLNA 4OINA 1TWHC 3FKIC 2JA8C 1ZYRA 2O5JA 3S1RK 2R93C 1TWCK 5C44C 4A3FC 2NVTC 3GTOC 3GTKC 4BY7C 4A3JK 4C3HC 1TWGK 4LJZA 3GTMC 4NOIA 4YG2A 2PMZD 2PMZL 4A3MK 4A3BK 1K83K 4YFKA 4OIOA 4QJVA 4KN7A 1TWFK 3S1MC 3PO3K 3EQLA 1Y1VK 3M3YK 1YNNA 2NVYC 2A68A 3WODA 1HQMA 2R92C 1TWHK 3FKIK 2JA8K 3HOWK 5M5XK 5C3EC 3GTPC 2R93K 5C44K 4A3FK 3GTOK 4BY7K 4Y52C 1I3QK 3H0GK 4C3HK 2BE5A 4OIQA 3GTKK 4GZYA 3GTQC 2E2HC 4YFXA 5C4XK 4C2MC 4A93K 4A3CK 4XSZA 3HOUC 3S1MK 2R7ZC 3S15C 2YU9C 2PPBA 2B63C 3S16C 3RZOK 1TWAC 4Y7NK 4LLGA 4KN4A 2VUMC 3S2HK 4MQ9A 4A3KC 3HOYC 5C3EK 1SMYA 5C4JK 3GTPK 3S1QC 4Y52K 4G7HA
chains in the Genus database with same CATH superfamily
3RZDC 1IL2A 2GSUA 4ZH4A 2KPUA 1G51A 4KDDA 3HOUK 1J6VA 2B63K 3PO2C 3AQPA 1PJ6A 2VUMK 2NVXC 4BLAA 1J6XA 2PA8L 3A8IA 3S1QK 4KATA 4OIPA 4C3JC 2JA5A 1XPPA 3GTLA 1IS1A 3HOZC 3K7AK 5JFEA 4C3IC 2NVYK 3TFIA 1J98A 2D6FC 1ZQ1C 5IP9C 3BP3A 3A8JA 5M5WK 4WJ3M 2WAQD 1Y1WC 2CFAB 3IPJA 3I4NK 3S14K 4LK1A 2V6SA 3SZZA 3CQZC 3ERED 1O2BA 1VH2A 3HKZD 1TWFC 2NVQK 3DXJA 3HOVK 3N0BA 1BGWA 3DLLS 2P8TA 5M3FK 4A3IC 1R9TK 1F9NA 3H3VL 4MEYA 4LQYA 2Y3PA 4BBSK 1I3QC 3H0GC 5IOTA 1I6HK 4LR2A 4KMHA 3GTGK 1V5VA 4OIRA 2ZJPS 1TWHA 2V6UA 5IYCK 4LK0A 4KC6A 3GTMA 3S1RC 1TWCC 4X6AC 3GTJK 1IQ0A 1F7VA 4G0VA 5JVHS 3PIPS 3AD9C 2W7VA 4GTDA 5IOSA 2ZJRS 4FZBA 1ZYRA 4IO9S 1VGXA 2O5JA 1BS2A 3GIRA 2R93C 3GTOC 1DCOA 4C3HC 4LJZA 4NOIA 2PMZL 1IE0A 1WQFA 1XXBA 3T02A 4A3MK 4A3BK 4YFKA 4WCES 2B63A 3TFHA 3EQLA 2VUMA 3OEPA 2NVYC 3GEIA 1HQMA 3G4AA 3FKIK 3HOWK 5M5XK 5C44K 4Y52C 3VA7A 2BE5A 3AD7C 3GTQC 3G4CA 1WOPA 4C2MC 5C4XK 4A3CK 1WSVA 4BLBA 4PABA 3RZOK 1TWAC 4Y7NK 3S2HK 3GTPK 1VJEA 1EI6A 2E2HK 5IYBC 4KMAA 4BBSC 3S17K 1I6HC 3HOXC 2JA6C 4XLPA 3GTGC 4GTEA 2R7ZK 4WILA 5CHPA 3FOFA 2YU9K 5FLMC 1R9TA 4KMUA 2JA7C 5EGHA 2NVTK 4BXXC 5E68A 3GTMK 1O2AA 4A3GC 5M3MK 3M4OK 5IP7K 2L5NA 4BBRC 5CJ9A 1Y1VA 4QIWD 4M1XA 5DM7S 2FQTA 4A3LK 1PJ5A 2GSNA 3GTJA 2ZUEA 4ILDA 4GFQA 2E2JK 2WB1D 2WAQL 4YFNA 4A3DK 2E2IK 2JA5C 4GT9A 4BKWA 5TMFA 3GTLC 3S2DK 1SFOK 1WCMK 3I4MC 3HOWC 1VRQC 1J6WA 1JVIA 1EQRA 2KWAA 1FEUA 5IOQA 4GTAA 4AYBD 3S1NK 5C4XC 1WQGA 3FKIA 1IBAA 4A3CC 1I50K 3RZOC 4Y7NC 3S2HC 3QX3A 3V4GA 4BY1K 4A3EK 5IYDK 5HL7S 1BDFA 3S17C 3OREA 5FJ8K 3GTPA 4OINA 1TWHC 2JA8C 1B4AA 2GAGC 1WORA 2E2HA 4A3FC 2NVTC 4A3JK 3GTMC 4YG2A 1XXCA 2RH6A 3LAJA 2R7ZA 1VLOA 2YU9A 4KN7A 3S1MC 1Y1VK 4J3NA 3AH5A 5DM6S 4WJ4A 4XCHA 3T00A 4KB2A 4BY7K 3GTKK 4OIQA 1O29A 4U67S 4GTFA 4G0WA 3HOUC 4KM9A 2B63C 4RMFA 2ZJQS 4LLGA 4KN4A 2VUMC 1AB4A 5C3EK 4GTCA 2XCQA 3S1QC 3FOEA 2E2IA 4G7HA 1UV7A 1WOOA 3K7AC 1SFOA 1WCMA 3S15K 1YX2A 4KB4A 3S16K 2V6TA 3HOYK 1TWGA 2XCOA 3RZDK 4DDQA 1XZQA 2A6HA 4BY1C 3I4NC 2GAHC 3S14C 3S0XA 1K83A 4G7ZA 4GTBA 4QIWL 2GSOA 2O5IA 2NVQC 1I50A 3HOVC 3PO2K 2NVXK 1R9TC 4KMDA 2Y0SD 4C3JK 3L4KA 2FQOA 3NUHA 2WB1L 4A3JC 4KASA 3HOZK 1WQHA 3GDZA 5IYCC 1O28A 4IOCS 1Y1VC 4G0UA 4A3KK 2A69A 2EBBA 5IP9K 1I6VA 3PIOS 3GTJC 1Y1WK 3CQZK 4AYBL 5JVOA 5EGEA 4IOAS 4Q5SA 1RU0A 3GTKA 4MEXA 1BJTA 4A3IK 3N0CA 1XZPA 4Q4ZA 5JVGS 4A3MC 2A6EA 4A3BC 3HKZL 3AD8C 1EH1A 2R92A 4KARA 4XLNA 3FKIC 4WFBS 3CAGA 1PJ7A 4FM9A 1DD5A 3S1RK 1TWCK 5C44C 1KQ4A 1TWGK 1YCLA 4LOWA 1K83K 4OIOA 4QJVA 3PO3K 3M3YK 2A68A 3WODA 1ZBSA 3GTPC 2R93K 3GTOK 3GSIA 4C3HK 4GZYA 4WF9S 1XZQB 2E2HC 2KQ1A 5HQHA 3N3YA 4A93K 4P9SA 4XSZA 3MMLB 4PAAA 2R7ZC 5TJ3A 2NVXA 2YU9C 3GEEA 5L46A 2PPBA 3LAPA 4MQ9A 4A3KC 5C4JK 4Y52K 3OPFA 3M4OC 3GTQK 5IP7C 3L4JA 3FHZA 4C2MK 3LPXA 4A3LC 2P5MA 1DCHA 3T01A 1F93A 1HI9A 1JQWA 1TWAK 4XSXA 1Y1WA 2PA8D 2E2JC 1IW7A 3CQZA 4A3DC 5IYBK 2E2IC 1TWFA 3HOXK 2JA6K 1ISEA 3S2DC 2XCRB 2R92K 5FLMK 1SFOC 4G7OA 3ADAC 1WCMC 4P5BA 2JA7K 4BXXK 1XZPB 4WFNS 3BUEA 3H0GA 1I3QA 2Y0SL 2CW0A 4A3GK 1O26A 3BP8C 1TWGC 2JH3A 4BBRK 1EK8A 1YNJA 3AQOA 3S1NC 1K83C 1EFWA 1WOSA 3PO3C 1TWCA 2L3UA 3M3YC 1I50C 3H3VD 5HL8A 3GEHA 2KXYA 2PHCB 3JSTA 2ZUFA 4A3EC 5IYDC 2JA5K 4AH6A 2RGRA 4KAWX 3TTGA 4QJVB 3GTLK 3A8KA 4A93C 5D4DA 4GTLA 1O27A 2R93A 3GTOA 3I4MK 5C4JC 1O25A 1DCPA 2CFAA 4JK1A 5TMCA 5M5YK 4C3IK 2NVYA 1XXAA 4C45A 4O2DA 1JOEA 1WIHA 1O24A 1F7UA 3GTQA 4BY7C 3GTKC 2PMZD 3CF5S 5IORA 3Q3QA 1TWFK 1USOA 1TWAA 4P5AA 1YNNA 2R92C 1TWHK 2JA8K 1ZVUA 4KM8A 5C3EC 4A3FK 1I3QK 3H0GK 1L0WA 1X31C 1GE9A 3LYWA 2JA6A 3GTGA 1C0AA 4YFXA 2ZFZA 1INNA 1USMA 3SZYA 3S1MK 3S15C 2JA7A 1O2FB 1ZXOA 3TFJA 3S16C 4X6AK 3HOYC 1B4BA 1SMYA 4WFAS 3HXAA 1WSRA
chains in the Genus database with same CATH topology
3RZDC 3M4OC 3GTQK 5IP7C 2E2HK 4X6AK 4ZH4A 5IYBC 4BBSC 3S17K 3K7AC 4C2MK 1I6HC 3HOXC 2JA6C 4XLPA 3HOUK 3GTGC 2R7ZK 3S15K 4A3LC 2YU9K 5FLMC 2B63K 3S16K 4KMUA 3PO2C 1TWAK 2VUMK 2JA7C 2NVXC 2NVTK 4BXXC 4XSXA 3HOYK 3GTMK 2PA8D 2E2JC 2PA8L 3S1QK 1IW7A 4OIPA 4C3JC 4A3GC 5M3MK 3RZDK 3M4OK 1XPPA 5IP7K 2A6HA 4BY1C 4BBRC 3I4NC 3S14C 2E2IC 4A3DC 5IYBK 3HOZC 3K7AK 4G7ZA 3HOXK 2JA6K 4QIWD 4C3IC 4QIWL 2NVYK 3S2DC 4A3LK 2O5IA 2NVQC 5FLMK 2R92K 1SFOC 3HOVC 4G7OA 1WCMC 3PO2K 5IP9C 2JA7K 2NVXK 4BXXK 1R9TC 2E2JK 2Y0SD 2Y0SL 5M5WK 2CW0A 4C3JK 4A3GK 2WAQD 2WB1D 2WAQL 2WB1L 4YFNA 4A3JC 1Y1WC 1TWGC 4BBRK 3I4NK 3S14K 2E2IK 4A3DK 2JA5C 4LK1A 3HOZK 3CQZC 1YNJA 5TMFA 3GTLC 3S1NC 3S2DK 1K83C 3HKZD 5IYCC 1TWFC 3PO3C 2NVQK 3DXJA 1SFOK 1Y1VC 3HOVK 4A3KK 1WCMK 3M3YC 2A69A 5IP9K 5M3FK 4A3IC 1I6VA 1I50C 3H3VD 1R9TK 3H3VL 3I4MC 3HOWC 3GTJC 4MEYA 4BBSK 1Y1WK 1I3QC 3H0GC 5IYDC 4A3EC 1I6HK 2JA5K 3GTGK 4AYBD 3CQZK 4AYBL 4OIRA 4QJVB 3GTLK 3S1NK 4A93C 5C4XC 5IYCK 5D4DA 4A3CC 4LK0A 4Q5SA 4MEXA 4A3IK 3S1RC 3RZOC 1TWCC 1I50K 4Y7NC 3S2HC 4X6AC 3I4MK 3GTJK 4Q4ZA 5C4JC 4BY1K 4A3EK 4JK1A 5IYDK 5TMCA 5M5YK 4C3IK 4A3MC 2A6EA 4A3BC 3HKZL 1BDFA 3S17C 5FJ8K 4XLNA 4OINA 1TWHC 3FKIC 2JA8C 1ZYRA 2O5JA 3S1RK 2R93C 1TWCK 5C44C 4A3FC 2NVTC 3GTOC 3GTKC 4BY7C 4A3JK 4C3HC 1TWGK 4LJZA 3GTMC 4NOIA 4YG2A 2PMZD 2PMZL 4A3MK 4A3BK 1K83K 4YFKA 4OIOA 4QJVA 4KN7A 1TWFK 3S1MC 3PO3K 3EQLA 1Y1VK 3M3YK 1YNNA 2NVYC 2A68A 3WODA 1HQMA 2R92C 1TWHK 3FKIK 2JA8K 3HOWK 5M5XK 5C3EC 3GTPC 2R93K 5C44K 4A3FK 3GTOK 4BY7K 4Y52C 1I3QK 3H0GK 4C3HK 2BE5A 4OIQA 3GTKK 4GZYA 3GTQC 2E2HC 4YFXA 5C4XK 4C2MC 4A93K 4A3CK 4XSZA 3HOUC 3S1MK 2R7ZC 3S15C 2YU9C 2PPBA 2B63C 3S16C 3RZOK 1TWAC 4Y7NK 4LLGA 4KN4A 2VUMC 3S2HK 4MQ9A 4A3KC 3HOYC 5C3EK 1SMYA 5C4JK 3GTPK 3S1QC 4Y52K 4G7HA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RZD C;  3M4O C;  3GTQ K;  5IP7 C;  2E2H K;  4X6A K;  4ZH4 A;  5IYB C;  4BBS C;  3S17 K;  3K7A C;  4C2M K;  1I6H C;  3HOX C;  2JA6 C;  4XLP A;  3HOU K;  3GTG C;  2R7Z K;  3S15 K;  4A3L C;  2YU9 K;  5FLM C;  2B63 K;  3S16 K;  4KMU A;  3PO2 C;  1TWA K;  2VUM K;  2JA7 C;  2NVX C;  2NVT K;  4BXX C;  4XSX A;  3HOY K;  3GTM K;  2PA8 D;  2E2J C;  2PA8 L;  3S1Q K;  1IW7 A;  4OIP A;  4C3J C;  4A3G C;  5M3M K;  3RZD K;  3M4O K;  1XPP A;  5IP7 K;  2A6H A;  4BY1 C;  4BBR C;  3I4N C;  3S14 C;  2E2I C;  4A3D C;  5IYB K;  3HOZ C;  3K7A K;  4G7Z A;  3HOX K;  2JA6 K;  4QIW D;  4C3I C;  4QIW L;  2NVY K;  3S2D C;  4A3L K;  2O5I A;  2NVQ C;  5FLM K;  2R92 K;  1SFO C;  3HOV C;  4G7O A;  1WCM C;  3PO2 K;  5IP9 C;  2JA7 K;  2NVX K;  4BXX K;  1R9T C;  2E2J K;  2Y0S D;  2Y0S L;  5M5W K;  2CW0 A;  4C3J K;  4A3G K;  2WAQ D;  2WB1 D;  2WAQ L;  2WB1 L;  4YFN A;  4A3J C;  1Y1W C;  1TWG C;  4BBR K;  3I4N K;  3S14 K;  2E2I K;  4A3D K;  2JA5 C;  4LK1 A;  3HOZ K;  3CQZ C;  1YNJ A;  5TMF A;  3GTL C;  3S1N C;  3S2D K;  1K83 C;  3HKZ D;  5IYC C;  1TWF C;  3PO3 C;  2NVQ K;  3DXJ A;  1SFO K;  1Y1V C;  3HOV K;  4A3K K;  1WCM K;  3M3Y C;  2A69 A;  5IP9 K;  5M3F K;  4A3I C;  1I6V A;  1I50 C;  3H3V D;  1R9T K;  3H3V L;  3I4M C;  3HOW C;  3GTJ C;  4MEY A;  4BBS K;  1Y1W K;  1I3Q C;  3H0G C;  5IYD C;  4A3E C;  1I6H K;  2JA5 K;  3GTG K;  4AYB D;  3CQZ K;  4AYB L;  4OIR A;  4QJV B;  3GTL K;  3S1N K;  4A93 C;  5C4X C;  5IYC K;  5D4D A;  4A3C C;  4LK0 A;  4Q5S A;  4MEX A;  4A3I K;  3S1R C;  3RZO C;  1TWC C;  1I50 K;  4Y7N C;  3S2H C;  4X6A C;  3I4M K;  3GTJ K;  4Q4Z A;  5C4J C;  4BY1 K;  4A3E K;  4JK1 A;  5IYD K;  5TMC A;  5M5Y K;  4C3I K;  4A3M C;  2A6E A;  4A3B C;  3HKZ L;  1BDF A;  3S17 C;  5FJ8 K;  4XLN A;  4OIN A;  1TWH C;  3FKI C;  2JA8 C;  1ZYR A;  2O5J A;  3S1R K;  2R93 C;  1TWC K;  5C44 C;  4A3F C;  2NVT C;  3GTO C;  3GTK C;  4BY7 C;  4A3J K;  4C3H C;  1TWG K;  4LJZ A;  3GTM C;  4NOI A;  4YG2 A;  2PMZ D;  2PMZ L;  4A3M K;  4A3B K;  1K83 K;  4YFK A;  4OIO A;  4QJV A;  4KN7 A;  1TWF K;  3S1M C;  3PO3 K;  3EQL A;  1Y1V K;  3M3Y K;  1YNN A;  2NVY C;  2A68 A;  3WOD A;  1HQM A;  2R92 C;  1TWH K;  3FKI K;  2JA8 K;  3HOW K;  5M5X K;  5C3E C;  3GTP C;  2R93 K;  5C44 K;  4A3F K;  3GTO K;  4BY7 K;  4Y52 C;  1I3Q K;  3H0G K;  4C3H K;  2BE5 A;  4OIQ A;  3GTK K;  4GZY A;  3GTQ C;  2E2H C;  4YFX A;  5C4X K;  4C2M C;  4A93 K;  4A3C K;  4XSZ A;  3HOU C;  3S1M K;  2R7Z C;  3S15 C;  2YU9 C;  2PPB A;  2B63 C;  3S16 C;  3RZO K;  1TWA C;  4Y7N K;  4LLG A;  4KN4 A;  2VUM C;  3S2H K;  4MQ9 A;  4A3K C;  3HOY C;  5C3E K;  1SMY A;  5C4J K;  3GTP K;  3S1Q C;  4Y52 K;  4G7H A; 
#chains in the Genus database with same CATH topology
 3RZD C;  1IL2 A;  2GSU A;  4ZH4 A;  2KPU A;  1G51 A;  4KDD A;  3HOU K;  1J6V A;  2B63 K;  3PO2 C;  3AQP A;  1PJ6 A;  2VUM K;  2NVX C;  4BLA A;  1J6X A;  2PA8 L;  3A8I A;  3S1Q K;  4KAT A;  4OIP A;  4C3J C;  2JA5 A;  1XPP A;  3GTL A;  1IS1 A;  3HOZ C;  3K7A K;  5JFE A;  4C3I C;  2NVY K;  3TFI A;  1J98 A;  2D6F C;  1ZQ1 C;  5IP9 C;  3BP3 A;  3A8J A;  5M5W K;  4WJ3 M;  2WAQ D;  1Y1W C;  2CFA B;  3IPJ A;  3I4N K;  3S14 K;  4LK1 A;  2V6S A;  3SZZ A;  3CQZ C;  3ERE D;  1O2B A;  1VH2 A;  3HKZ D;  1TWF C;  2NVQ K;  3DXJ A;  3HOV K;  3N0B A;  1BGW A;  3DLL S;  2P8T A;  5M3F K;  4A3I C;  1R9T K;  1F9N A;  3H3V L;  4MEY A;  4LQY A;  2Y3P A;  4BBS K;  1I3Q C;  3H0G C;  5IOT A;  1I6H K;  4LR2 A;  4KMH A;  3GTG K;  1V5V A;  4OIR A;  2ZJP S;  1TWH A;  2V6U A;  5IYC K;  4LK0 A;  4KC6 A;  3GTM A;  3S1R C;  1TWC C;  4X6A C;  3GTJ K;  1IQ0 A;  1F7V A;  4G0V A;  5JVH S;  3PIP S;  3AD9 C;  2W7V A;  4GTD A;  5IOS A;  2ZJR S;  4FZB A;  1ZYR A;  4IO9 S;  1VGX A;  2O5J A;  1BS2 A;  3GIR A;  2R93 C;  3GTO C;  1DCO A;  4C3H C;  4LJZ A;  4NOI A;  2PMZ L;  1IE0 A;  1WQF A;  1XXB A;  3T02 A;  4A3M K;  4A3B K;  4YFK A;  4WCE S;  2B63 A;  3TFH A;  3EQL A;  2VUM A;  3OEP A;  2NVY C;  3GEI A;  1HQM A;  3G4A A;  3FKI K;  3HOW K;  5M5X K;  5C44 K;  4Y52 C;  3VA7 A;  2BE5 A;  3AD7 C;  3GTQ C;  3G4C A;  1WOP A;  4C2M C;  5C4X K;  4A3C K;  1WSV A;  4BLB A;  4PAB A;  3RZO K;  1TWA C;  4Y7N K;  3S2H K;  3GTP K;  1VJE A;  1EI6 A;  2E2H K;  5IYB C;  4KMA A;  4BBS C;  3S17 K;  1I6H C;  3HOX C;  2JA6 C;  4XLP A;  3GTG C;  4GTE A;  2R7Z K;  4WIL A;  5CHP A;  3FOF A;  2YU9 K;  5FLM C;  1R9T A;  4KMU A;  2JA7 C;  5EGH A;  2NVT K;  4BXX C;  5E68 A;  3GTM K;  1O2A A;  4A3G C;  5M3M K;  3M4O K;  5IP7 K;  2L5N A;  4BBR C;  5CJ9 A;  1Y1V A;  4QIW D;  4M1X A;  5DM7 S;  2FQT A;  4A3L K;  1PJ5 A;  2GSN A;  3GTJ A;  2ZUE A;  4ILD A;  4GFQ A;  2E2J K;  2WB1 D;  2WAQ L;  4YFN A;  4A3D K;  2E2I K;  2JA5 C;  4GT9 A;  4BKW A;  5TMF A;  3GTL C;  3S2D K;  1SFO K;  1WCM K;  3I4M C;  3HOW C;  1VRQ C;  1J6W A;  1JVI A;  1EQR A;  2KWA A;  1FEU A;  5IOQ A;  4GTA A;  4AYB D;  3S1N K;  5C4X C;  1WQG A;  3FKI A;  1IBA A;  4A3C C;  1I50 K;  3RZO C;  4Y7N C;  3S2H C;  3QX3 A;  3V4G A;  4BY1 K;  4A3E K;  5IYD K;  5HL7 S;  1BDF A;  3S17 C;  3ORE A;  5FJ8 K;  3GTP A;  4OIN A;  1TWH C;  2JA8 C;  1B4A A;  2GAG C;  1WOR A;  2E2H A;  4A3F C;  2NVT C;  4A3J K;  3GTM C;  4YG2 A;  1XXC A;  2RH6 A;  3LAJ A;  2R7Z A;  1VLO A;  2YU9 A;  4KN7 A;  3S1M C;  1Y1V K;  4J3N A;  3AH5 A;  5DM6 S;  4WJ4 A;  4XCH A;  3T00 A;  4KB2 A;  4BY7 K;  3GTK K;  4OIQ A;  1O29 A;  4U67 S;  4GTF A;  4G0W A;  3HOU C;  4KM9 A;  2B63 C;  4RMF A;  2ZJQ S;  4LLG A;  4KN4 A;  2VUM C;  1AB4 A;  5C3E K;  4GTC A;  2XCQ A;  3S1Q C;  3FOE A;  2E2I A;  4G7H A;  1UV7 A;  1WOO A;  3K7A C;  1SFO A;  1WCM A;  3S15 K;  1YX2 A;  4KB4 A;  3S16 K;  2V6T A;  3HOY K;  1TWG A;  2XCO A;  3RZD K;  4DDQ A;  1XZQ A;  2A6H A;  4BY1 C;  3I4N C;  2GAH C;  3S14 C;  3S0X A;  1K83 A;  4G7Z A;  4GTB A;  4QIW L;  2GSO A;  2O5I A;  2NVQ C;  1I50 A;  3HOV C;  3PO2 K;  2NVX K;  1R9T C;  4KMD A;  2Y0S D;  4C3J K;  3L4K A;  2FQO A;  3NUH A;  2WB1 L;  4A3J C;  4KAS A;  3HOZ K;  1WQH A;  3GDZ A;  5IYC C;  1O28 A;  4IOC S;  1Y1V C;  4G0U A;  4A3K K;  2A69 A;  2EBB A;  5IP9 K;  1I6V A;  3PIO S;  3GTJ C;  1Y1W K;  3CQZ K;  4AYB L;  5JVO A;  5EGE A;  4IOA S;  4Q5S A;  1RU0 A;  3GTK A;  4MEX A;  1BJT A;  4A3I K;  3N0C A;  1XZP A;  4Q4Z A;  5JVG S;  4A3M C;  2A6E A;  4A3B C;  3HKZ L;  3AD8 C;  1EH1 A;  2R92 A;  4KAR A;  4XLN A;  3FKI C;  4WFB S;  3CAG A;  1PJ7 A;  4FM9 A;  1DD5 A;  3S1R K;  1TWC K;  5C44 C;  1KQ4 A;  1TWG K;  1YCL A;  4LOW A;  1K83 K;  4OIO A;  4QJV A;  3PO3 K;  3M3Y K;  2A68 A;  3WOD A;  1ZBS A;  3GTP C;  2R93 K;  3GTO K;  3GSI A;  4C3H K;  4GZY A;  4WF9 S;  1XZQ B;  2E2H C;  2KQ1 A;  5HQH A;  3N3Y A;  4A93 K;  4P9S A;  4XSZ A;  3MML B;  4PAA A;  2R7Z C;  5TJ3 A;  2NVX A;  2YU9 C;  3GEE A;  5L46 A;  2PPB A;  3LAP A;  4MQ9 A;  4A3K C;  5C4J K;  4Y52 K;  3OPF A;  3M4O C;  3GTQ K;  5IP7 C;  3L4J A;  3FHZ A;  4C2M K;  3LPX A;  4A3L C;  2P5M A;  1DCH A;  3T01 A;  1F93 A;  1HI9 A;  1JQW A;  1TWA K;  4XSX A;  1Y1W A;  2PA8 D;  2E2J C;  1IW7 A;  3CQZ A;  4A3D C;  5IYB K;  2E2I C;  1TWF A;  3HOX K;  2JA6 K;  1ISE A;  3S2D C;  2XCR B;  2R92 K;  5FLM K;  1SFO C;  4G7O A;  3ADA C;  1WCM C;  4P5B A;  2JA7 K;  4BXX K;  1XZP B;  4WFN S;  3BUE A;  3H0G A;  1I3Q A;  2Y0S L;  2CW0 A;  4A3G K;  1O26 A;  3BP8 C;  1TWG C;  2JH3 A;  4BBR K;  1EK8 A;  1YNJ A;  3AQO A;  3S1N C;  1K83 C;  1EFW A;  1WOS A;  3PO3 C;  1TWC A;  2L3U A;  3M3Y C;  1I50 C;  3H3V D;  5HL8 A;  3GEH A;  2KXY A;  2PHC B;  3JST A;  2ZUF A;  4A3E C;  5IYD C;  2JA5 K;  4AH6 A;  2RGR A;  4KAW X;  3TTG A;  4QJV B;  3GTL K;  3A8K A;  4A93 C;  5D4D A;  4GTL A;  1O27 A;  2R93 A;  3GTO A;  3I4M K;  5C4J C;  1O25 A;  1DCP A;  2CFA A;  4JK1 A;  5TMC A;  5M5Y K;  4C3I K;  2NVY A;  1XXA A;  4C45 A;  4O2D A;  1JOE A;  1WIH A;  1O24 A;  1F7U A;  3GTQ A;  4BY7 C;  3GTK C;  2PMZ D;  3CF5 S;  5IOR A;  3Q3Q A;  1TWF K;  1USO A;  1TWA A;  4P5A A;  1YNN A;  2R92 C;  1TWH K;  2JA8 K;  1ZVU A;  4KM8 A;  5C3E C;  4A3F K;  1I3Q K;  3H0G K;  1L0W A;  1X31 C;  1GE9 A;  3LYW A;  2JA6 A;  3GTG A;  1C0A A;  4YFX A;  2ZFZ A;  1INN A;  1USM A;  3SZY A;  3S1M K;  3S15 C;  2JA7 A;  1O2F B;  1ZXO A;  3TFJ A;  3S16 C;  4X6A K;  3HOY C;  1B4B A;  1SMY A;  4WFA S;  3HXA A;  1WSR A; 
#chains in the Genus database with same CATH homology
 3RZD C;  3M4O C;  3GTQ K;  5IP7 C;  2E2H K;  4X6A K;  4ZH4 A;  5IYB C;  4BBS C;  3S17 K;  3K7A C;  4C2M K;  1I6H C;  3HOX C;  2JA6 C;  4XLP A;  3HOU K;  3GTG C;  2R7Z K;  3S15 K;  4A3L C;  2YU9 K;  5FLM C;  2B63 K;  3S16 K;  4KMU A;  3PO2 C;  1TWA K;  2VUM K;  2JA7 C;  2NVX C;  2NVT K;  4BXX C;  4XSX A;  3HOY K;  3GTM K;  2PA8 D;  2E2J C;  2PA8 L;  3S1Q K;  1IW7 A;  4OIP A;  4C3J C;  4A3G C;  5M3M K;  3RZD K;  3M4O K;  1XPP A;  5IP7 K;  2A6H A;  4BY1 C;  4BBR C;  3I4N C;  3S14 C;  2E2I C;  4A3D C;  5IYB K;  3HOZ C;  3K7A K;  4G7Z A;  3HOX K;  2JA6 K;  4QIW D;  4C3I C;  4QIW L;  2NVY K;  3S2D C;  4A3L K;  2O5I A;  2NVQ C;  5FLM K;  2R92 K;  1SFO C;  3HOV C;  4G7O A;  1WCM C;  3PO2 K;  5IP9 C;  2JA7 K;  2NVX K;  4BXX K;  1R9T C;  2E2J K;  2Y0S D;  2Y0S L;  5M5W K;  2CW0 A;  4C3J K;  4A3G K;  2WAQ D;  2WB1 D;  2WAQ L;  2WB1 L;  4YFN A;  4A3J C;  1Y1W C;  1TWG C;  4BBR K;  3I4N K;  3S14 K;  2E2I K;  4A3D K;  2JA5 C;  4LK1 A;  3HOZ K;  3CQZ C;  1YNJ A;  5TMF A;  3GTL C;  3S1N C;  3S2D K;  1K83 C;  3HKZ D;  5IYC C;  1TWF C;  3PO3 C;  2NVQ K;  3DXJ A;  1SFO K;  1Y1V C;  3HOV K;  4A3K K;  1WCM K;  3M3Y C;  2A69 A;  5IP9 K;  5M3F K;  4A3I C;  1I6V A;  1I50 C;  3H3V D;  1R9T K;  3H3V L;  3I4M C;  3HOW C;  3GTJ C;  4MEY A;  4BBS K;  1Y1W K;  1I3Q C;  3H0G C;  5IYD C;  4A3E C;  1I6H K;  2JA5 K;  3GTG K;  4AYB D;  3CQZ K;  4AYB L;  4OIR A;  4QJV B;  3GTL K;  3S1N K;  4A93 C;  5C4X C;  5IYC K;  5D4D A;  4A3C C;  4LK0 A;  4Q5S A;  4MEX A;  4A3I K;  3S1R C;  3RZO C;  1TWC C;  1I50 K;  4Y7N C;  3S2H C;  4X6A C;  3I4M K;  3GTJ K;  4Q4Z A;  5C4J C;  4BY1 K;  4A3E K;  4JK1 A;  5IYD K;  5TMC A;  5M5Y K;  4C3I K;  4A3M C;  2A6E A;  4A3B C;  3HKZ L;  1BDF A;  3S17 C;  5FJ8 K;  4XLN A;  4OIN A;  1TWH C;  3FKI C;  2JA8 C;  1ZYR A;  2O5J A;  3S1R K;  2R93 C;  1TWC K;  5C44 C;  4A3F C;  2NVT C;  3GTO C;  3GTK C;  4BY7 C;  4A3J K;  4C3H C;  1TWG K;  4LJZ A;  3GTM C;  4NOI A;  4YG2 A;  2PMZ D;  2PMZ L;  4A3M K;  4A3B K;  1K83 K;  4YFK A;  4OIO A;  4QJV A;  4KN7 A;  1TWF K;  3S1M C;  3PO3 K;  3EQL A;  1Y1V K;  3M3Y K;  1YNN A;  2NVY C;  2A68 A;  3WOD A;  1HQM A;  2R92 C;  1TWH K;  3FKI K;  2JA8 K;  3HOW K;  5M5X K;  5C3E C;  3GTP C;  2R93 K;  5C44 K;  4A3F K;  3GTO K;  4BY7 K;  4Y52 C;  1I3Q K;  3H0G K;  4C3H K;  2BE5 A;  4OIQ A;  3GTK K;  4GZY A;  3GTQ C;  2E2H C;  4YFX A;  5C4X K;  4C2M C;  4A93 K;  4A3C K;  4XSZ A;  3HOU C;  3S1M K;  2R7Z C;  3S15 C;  2YU9 C;  2PPB A;  2B63 C;  3S16 C;  3RZO K;  1TWA C;  4Y7N K;  4LLG A;  4KN4 A;  2VUM C;  3S2H K;  4MQ9 A;  4A3K C;  3HOY C;  5C3E K;  1SMY A;  5C4J K;  3GTP K;  3S1Q C;  4Y52 K;  4G7H A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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