3S2HC

Rna polymerase ii initiation complex with a 6-nt rna containing a 2[prime]-iodo atp
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
b'EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s2hC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s2hC01
1I6VA 2NVYK 1TWGC 5FJ8K 3S1RK 2YU9C 4OIQA 2NVTC 3GTMC 5IYBK 4A3JC 4XLNA 3RZDC 4Y52C 4G7HA 4A3KC 1TWGK 2YU9K 2NVTK 3GTMK 4A3JK 3RZDK 4Y52K 4A3KK 4QIWL 3GTPC 3HOXC 3HOVC 5M5YK 3DXJA 2R7ZC 3GTPK 4Y7NC 2WB1D 5C44C 3HOVK 2R7ZK 3HKZD 5C44K 4ZH4A 4XSXA 3S2DC 3H3VL 4YG2A 3GTKC 3HOWC 3PO2C 3S2DK 4A3GC 3GTKK 5IYDK 3HOWK 3PO2K 1ZYRA 3EQLA 3S17C 4G7ZA 4A3GK 4Q5SA 4A93C 4LK0A 4QIWD 3S2HC 4BXXC 4A3DC 3S17K 2JA7C 2E2IC 2PPBA 1XPPA 4A93K 3S2HK 4BXXK 4A3DK 3S1QC 5C3EC 2E2IK 4MEYA 2O5IA 2JA7K 3S1NC 3S1QK 5TMFA 5C3EK 1I50C 4LJZA 3H3VD 5M5XK 3S1NK 5TMCA 2WAQL 1I50K 3CQZC 1Y1WC 2Y0SL 4KMUA 3CQZK 1Y1WK 3S1MC 4AYBL 4A3EC 3S14C 1I6HK 1SMYA 3S1MK 4A3EK 1WCMC 3S14K 1WCMK 2WAQD 5IYCC 2A6HA 4BBRK 4C3IK 2Y0SD 4YFKA 2R92K 5IYDC 4KN7A 4A3BC 5IYCK 3HKZL 3GTJC 4AYBD 3RZOK 4A3BK 2R93C 4JK1A 1TWAC 3GTJK 5M5WK 4KN4A 5C4XC 2R93K 2BE5A 1TWAK 5C4XK 5D4DA 1TWCC 1YNJA 1TWCK 1BDFA 5FLMC 3M4OC 2NVQC 5FLMK 2B63C 2NVQK 3M4OK 3M3YC 4G7OA 2B63K 1TWHC 4LLGA 3GTOC 3M3YK 4BY7C 1TWHK 4A3IK 3GTOK 4BBSC 3HOYC 5C4JC 4GZYA 4BY7K 1R9TC 4MQ9A 4BBSK 3GTQC 4BBRC 4C3IC 5C4JK 1R9TK 2R92C 3HOYK 3S15C 2CW0A 3GTLC 3I4MK 4C2MC 3GTQK 4OINA 3S15K 4XSZA 3GTLK 3RZOC 4C2MK 3HOUK 1Y1VC 3HOZC 4BY1C 1Y1VK 3HOZK 4BY1K 5M3FK 5IP9C 2E2JC 2E2HC 4C3JC 1I6HC 2NVXC 4A3LC 2PA8L 4A3FC 4MEXA 4QJVB 5IP9K 2E2JK 4C3JK 1YNNA 2E2HK 3S16C 3PO3C 3FKIC 3K7AC 4A3FK 4YFXA 2NVXK 1IW7A 4A3LK 3S16K 5IP7C 3FKIK 4LK1A 3K7AK 3PO3K 5IP7K 2VUMC 1I3QC 2VUMK 2JA8C 4NOIA 4A3IC 3GTGC 2JA6C 4A3CC 4X6AC 2PA8D 2JA5C 1I3QK 3I4NC 1HQMA 3HOXK 2JA8K 3GTGK 4A3MC 4Y7NK 2JA6K 4A3CK 2A68A 2JA5K 2PMZL 4Q4ZA 3I4NK 4X6AK 4A3MK 5M3MK 2A6EA 4C3HK 1TWFC 2A69A 3H0GC 1K83C 4YFNA 1TWFK 3H0GK 3HOUC 1K83K 4QJVA 2O5JA 1SFOC 4OIRA 1SFOK 3WODA 5IYBC 4C3HC 3I4MC 2PMZD 2WB1L 4XLPA 4OIPA 2NVYC 3S1RC 4OIOA
chains in the Genus database with same CATH superfamily
1I6VA 5TJ3A 1WOSA 4Y52C 4A3KC 2PHCB 4Y52K 4A3KK 3HOXC 3HOVC 5M5YK 1EQRA 3HOVK 4IO9S 1TWAA 3HOWC 4KDDA 3HOWK 3EQLA 4G0UA 4Q5SA 3FKIA 3GEEA 2E2IC 4GTBA 2E2IK 2O5IA 3S1NC 3ERED 3H3VD 4LJZA 1WOPA 4KB2A 3S1NK 2KPUA 2Y0SL 5HL7S 3A8JA 4A3EC 3GEIA 4GTAA 4A3EK 1WCMC 3PIPS 1K83A 1WCMK 4KB4A 4P5AA 2WAQD 2R92K 4YFKA 1C0AA 4U67S 4WFBS 1FEUA 1IS1A 1J98A 1JQWA 1TWCC 5E68A 2GSUA 1YNJA 1TWCK 1DD5A 3AD8C 3BP3A 2NVQC 4PABA 5IOTA 1VH2A 3GTGA 1EI6A 2NVQK 1G51A 2XCQA 1F93A 2W7VA 2L5NA 4J3NA 1R9TC 1L0WA 4ILDA 3CAGA 2E2IA 1R9TK 3S15C 2CW0A 3GSIA 3S15K 4PAAA 2XCRB 3QX3A 1Y1VC 1Y1VK 4GFQA 4C3JC 1KQ4A 4QJVB 4C3JK 1WCMA 4WF9S 1BGWA 4LK1A 1I3QC 3N0BA 4NOIA 1I3QK 4X6AC 1O2AA 4KARA 2PA8D 3I4NC 3N0CA 4X6AK 4Y7NK 1USMA 3TFJA 3L4JA 3I4NK 5JVGS 1F9NA 3A8KA 1TWCA 5IORA 3AD7C 3T01A 4YFNA 1VGXA 3G4CA 1O26A 4OIRA 3I4MC 4C3HC 2PMZD 3T02A 3S1RC 4C3HK 2CFAA 3I4MK 1B4BA 1J6WA 3S1RK 1R9TA 3RZDC 2CFAB 3RZDK 2ZJQS 5L46A 5C44C 3HKZD 1Y1VA 3N3YA 5C44K 3H3VL 3GTKC 3PO2C 3BP8C 1WSRA 3GTKK 3PO2K 4GTLA 4GTCA 3S2HC 3S2HK 3G4AA 4KC6A 3S1QC 1PJ5A 2FQOA 1B4AA 1I3QA 4FZBA 3S1QK 5TMFA 5M5XK 5TMCA 2GAGC 2WAQL 4XCHA 1Y1WC 4KMUA 5DM7S 1Y1WK 4C45A 1SMYA 3CF5S 5IOSA 1DCPA 2D6FC 2Y3PA 4C3IK 2ZUEA 1V5VA 3RZOK 3TFHA 1ZBSA 3BUEA 4WFNS 1F7UA 3IPJA 3TTGA 3OPFA 3SZZA 1BDFA 4LR2A 1J6XA 1O25A 3M3YC 4G7OA 1EFWA 3GTKA 3AQOA 3M3YK 4BY7C 1X31C 4A3IK 3PIOS 3HOYC 5C4JC 4BY7K 4MQ9A 3GTQC 1WQHA 5C4JK 3HOYK 2R92C 3GTQK 1IE0A 3GDZA 4KATA 4XSZA 3AD9C 1JOEA 3HOUK 5DM6S 4BY1C 1Y1WA 4BY1K 5M3FK 2PA8L 2E2HC 2ZUFA 1I6HC 2NVXC 4A3LC 3FOEA 4MEXA 2E2HK 3L4KA 2NVXK 4A3LK 3PO3C 1I6HK 4YFXA 3PO3K 2VUMC 4LQYA 2RGRA 2VUMK 2JA8C 1AB4A 2JH3A 3V4GA 1HQMA 4AH6A 2JA8K 3LPXA 2A68A 2PMZL 1VJEA 4GTDA 1O28A 1TWFC 3H0GC 1TWFK 1RU0A 3H0GK 5JVOA 3FOFA 4KM8A 1BJTA 4QJVA 1SFOC 1YX2A 3VA7A 1XXBA 1SFOK 1IL2A 5IYBC 2XCOA 4XLPA 4OIPA 2NVYC 5FJ8K 3HKZL 5IYBK 5EGHA 1EH1A 1TWGC 2NVYK 2YU9C 4OIQA 3GTMC 4A3JC 1TWGK 2YU9K 4G7HA 4IOCS 1XZPB 3GTQA 1VLOA 3GTMK 4A3JK 2R92A 4KM9A 5HQHA 2R7ZC 4Y7NC 1PJ7A 2R7ZK 4WFAS 4ZH4A 4XSXA 1ZVUA 2KWAA 4YG2A 2P8TA 2E2HA 5IYDK 2NVXA 1ZYRA 1WORA 4BXXC 4QIWD 4A3DC 5JFEA 1XPPA 4BXXK 4A3DK 5C3EC 2VUMA 5C3EK 4KMDA 3SZYA 3CQZC 2RH6A 3CQZK 3NUHA 3S14C 1XZQB 5JVHS 1TWFA 3S14K 3H0GA 3TFIA 3Q3QA 5HL8A 1SFOA 4BBRK 4A3BC 1XXCA 4AYBD 2NVYA 1WIHA 4A3BK 2R93C 4JK1A 1TWAC 1TWGA 4KN4A 2ZJPS 2ZFZA 4G0WA 2YU9A 2R93K 1TWAK 3LAJA 3GTMA 4FM9A 2FQTA 2R7ZA 2B63C 1O24A 5EGEA 4P9SA 2KQ1A 2B63K 2L3UA 1TWHC 3A8IA 3T00A 1O2BA 1TWHK 2P5MA 4BBSC 2V6UA 4BBSK 4C3IC 3GTLC 4C2MC 3GTLK 3RZOC 4C2MK 3HOZC 3CQZA 3HOZK 2ZJRS 2V6TA 1BS2A 1USOA 3HXAA 1YNNA 1WQGA 1IQ0A 5IP7C 5IP7K 3GTGC 4A3IC 4A3CC 2JA6C 3GEHA 3HOXK 2JA5C 3GTGK 4A3CK 2JA6K 2JA5K 2R93A 5M3MK 3DLLS 4GT9A 2KXYA 3HOUC 1INNA 2O5JA 2B63A 4WJ4A 1TWHA 1O2FB 4WCES 2NVTC 4XLNA 2NVTK 4IOAS 3MMLB 4KMHA 3GTLA 4BLAA 1JVIA 3GTPC 1XXAA 4QIWL 1IBAA 3DXJA 3GTPK 2WB1D 3S2DC 1GE9A 1HI9A 3S2DK 4A3GC 2V6SA 4G0VA 3S17C 4G7ZA 4A3GK 4A93C 4LK0A 1ZQ1C 3S17K 2JA7C 4WJ3M 2PPBA 3ADAC 4A93K 2JA7K 4MEYA 3OREA 1I50C 1XZPA 4KAWX 2JA6A 1I50K 2JA5A 1UV7A 2EBBA 3S1MC 4AYBL 3S1MK 3LYWA 4GTEA 4BLBA 4RMFA 3S0XA 5IYCC 2A6HA 2Y0SD 1VRQC 4M1XA 5IYDC 4KN7A 5IYCK 3GTJC 1ISEA 3GTJK 5M5WK 5C4XC 3FHZA 2BE5A 5C4XK 5D4DA 1ZXOA 3GTPA 5FLMC 3M4OC 5CHPA 1WQFA 1XZQA 5FLMK 1WOOA 3M4OK 1DCHA 1J6VA 4KMAA 4LLGA 1YCLA 3GTOC 3LAPA 1F7VA 3GTOK 4GZYA 1EK8A 1WSVA 4BBRC 2JA7A 4P5BA 3OEPA 4OINA 4LOWA 3AQPA 1I50A 2GAHC 3GIRA 5IP9C 2E2JC 4BKWA 4OIOA 4A3FC 5IP9K 2E2JK 1DCOA 3S16C 3FKIC 3K7AC 4A3FK 1IW7A 1O27A 3S16K 3FKIK 3K7AK 4KASA 3JSTA 5IOQA 4GTFA 3GTJA 4A3MC 4Q4ZA 1PJ6A 4A3MK 3AH5A 2A6EA 4O2DA 2A69A 4WILA 4DDQA 1K83C 1O29A 1K83K 5CJ9A 3WODA 2GSNA 2WB1L 3GTOA 2GSOA
chains in the Genus database with same CATH topology
1I6VA 2NVYK 1TWGC 5FJ8K 3S1RK 2YU9C 4OIQA 2NVTC 3GTMC 5IYBK 4A3JC 4XLNA 3RZDC 4Y52C 4G7HA 4A3KC 1TWGK 2YU9K 2NVTK 3GTMK 4A3JK 3RZDK 4Y52K 4A3KK 4QIWL 3GTPC 3HOXC 3HOVC 5M5YK 3DXJA 2R7ZC 3GTPK 4Y7NC 2WB1D 5C44C 3HOVK 2R7ZK 3HKZD 5C44K 4ZH4A 4XSXA 3S2DC 3H3VL 4YG2A 3GTKC 3HOWC 3PO2C 3S2DK 4A3GC 3GTKK 5IYDK 3HOWK 3PO2K 1ZYRA 3EQLA 3S17C 4G7ZA 4A3GK 4Q5SA 4A93C 4LK0A 4QIWD 3S2HC 4BXXC 4A3DC 3S17K 2JA7C 2E2IC 2PPBA 1XPPA 4A93K 3S2HK 4BXXK 4A3DK 3S1QC 5C3EC 2E2IK 4MEYA 2O5IA 2JA7K 3S1NC 3S1QK 5TMFA 5C3EK 1I50C 4LJZA 3H3VD 5M5XK 3S1NK 5TMCA 2WAQL 1I50K 3CQZC 1Y1WC 2Y0SL 4KMUA 3CQZK 1Y1WK 3S1MC 4AYBL 4A3EC 3S14C 1I6HK 1SMYA 3S1MK 4A3EK 1WCMC 3S14K 1WCMK 2WAQD 5IYCC 2A6HA 4BBRK 4C3IK 2Y0SD 4YFKA 2R92K 5IYDC 4KN7A 4A3BC 5IYCK 3HKZL 3GTJC 4AYBD 3RZOK 4A3BK 2R93C 4JK1A 1TWAC 3GTJK 5M5WK 4KN4A 5C4XC 2R93K 2BE5A 1TWAK 5C4XK 5D4DA 1TWCC 1YNJA 1TWCK 1BDFA 5FLMC 3M4OC 2NVQC 5FLMK 2B63C 2NVQK 3M4OK 3M3YC 4G7OA 2B63K 1TWHC 4LLGA 3GTOC 3M3YK 4BY7C 1TWHK 4A3IK 3GTOK 4BBSC 3HOYC 5C4JC 4GZYA 4BY7K 1R9TC 4MQ9A 4BBSK 3GTQC 4BBRC 4C3IC 5C4JK 1R9TK 2R92C 3HOYK 3S15C 2CW0A 3GTLC 3I4MK 4C2MC 3GTQK 4OINA 3S15K 4XSZA 3GTLK 3RZOC 4C2MK 3HOUK 1Y1VC 3HOZC 4BY1C 1Y1VK 3HOZK 4BY1K 5M3FK 5IP9C 2E2JC 2E2HC 4C3JC 1I6HC 2NVXC 4A3LC 2PA8L 4A3FC 4MEXA 4QJVB 5IP9K 2E2JK 4C3JK 1YNNA 2E2HK 3S16C 3PO3C 3FKIC 3K7AC 4A3FK 4YFXA 2NVXK 1IW7A 4A3LK 3S16K 5IP7C 3FKIK 4LK1A 3K7AK 3PO3K 5IP7K 2VUMC 1I3QC 2VUMK 2JA8C 4NOIA 4A3IC 3GTGC 2JA6C 4A3CC 4X6AC 2PA8D 2JA5C 1I3QK 3I4NC 1HQMA 3HOXK 2JA8K 3GTGK 4A3MC 4Y7NK 2JA6K 4A3CK 2A68A 2JA5K 2PMZL 4Q4ZA 3I4NK 4X6AK 4A3MK 5M3MK 2A6EA 4C3HK 1TWFC 2A69A 3H0GC 1K83C 4YFNA 1TWFK 3H0GK 3HOUC 1K83K 4QJVA 2O5JA 1SFOC 4OIRA 1SFOK 3WODA 5IYBC 4C3HC 3I4MC 2PMZD 2WB1L 4XLPA 4OIPA 2NVYC 3S1RC 4OIOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1I6V A;  2NVY K;  1TWG C;  5FJ8 K;  3S1R K;  2YU9 C;  4OIQ A;  2NVT C;  3GTM C;  5IYB K;  4A3J C;  4XLN A;  3RZD C;  4Y52 C;  4G7H A;  4A3K C;  1TWG K;  2YU9 K;  2NVT K;  3GTM K;  4A3J K;  3RZD K;  4Y52 K;  4A3K K;  4QIW L;  3GTP C;  3HOX C;  3HOV C;  5M5Y K;  3DXJ A;  2R7Z C;  3GTP K;  4Y7N C;  2WB1 D;  5C44 C;  3HOV K;  2R7Z K;  3HKZ D;  5C44 K;  4ZH4 A;  4XSX A;  3S2D C;  3H3V L;  4YG2 A;  3GTK C;  3HOW C;  3PO2 C;  3S2D K;  4A3G C;  3GTK K;  5IYD K;  3HOW K;  3PO2 K;  1ZYR A;  3EQL A;  3S17 C;  4G7Z A;  4A3G K;  4Q5S A;  4A93 C;  4LK0 A;  4QIW D;  3S2H C;  4BXX C;  4A3D C;  3S17 K;  2JA7 C;  2E2I C;  2PPB A;  1XPP A;  4A93 K;  3S2H K;  4BXX K;  4A3D K;  3S1Q C;  5C3E C;  2E2I K;  4MEY A;  2O5I A;  2JA7 K;  3S1N C;  3S1Q K;  5TMF A;  5C3E K;  1I50 C;  4LJZ A;  3H3V D;  5M5X K;  3S1N K;  5TMC A;  2WAQ L;  1I50 K;  3CQZ C;  1Y1W C;  2Y0S L;  4KMU A;  3CQZ K;  1Y1W K;  3S1M C;  4AYB L;  4A3E C;  3S14 C;  1I6H K;  1SMY A;  3S1M K;  4A3E K;  1WCM C;  3S14 K;  1WCM K;  2WAQ D;  5IYC C;  2A6H A;  4BBR K;  4C3I K;  2Y0S D;  4YFK A;  2R92 K;  5IYD C;  4KN7 A;  4A3B C;  5IYC K;  3HKZ L;  3GTJ C;  4AYB D;  3RZO K;  4A3B K;  2R93 C;  4JK1 A;  1TWA C;  3GTJ K;  5M5W K;  4KN4 A;  5C4X C;  2R93 K;  2BE5 A;  1TWA K;  5C4X K;  5D4D A;  1TWC C;  1YNJ A;  1TWC K;  1BDF A;  5FLM C;  3M4O C;  2NVQ C;  5FLM K;  2B63 C;  2NVQ K;  3M4O K;  3M3Y C;  4G7O A;  2B63 K;  1TWH C;  4LLG A;  3GTO C;  3M3Y K;  4BY7 C;  1TWH K;  4A3I K;  3GTO K;  4BBS C;  3HOY C;  5C4J C;  4GZY A;  4BY7 K;  1R9T C;  4MQ9 A;  4BBS K;  3GTQ C;  4BBR C;  4C3I C;  5C4J K;  1R9T K;  2R92 C;  3HOY K;  3S15 C;  2CW0 A;  3GTL C;  3I4M K;  4C2M C;  3GTQ K;  4OIN A;  3S15 K;  4XSZ A;  3GTL K;  3RZO C;  4C2M K;  3HOU K;  1Y1V C;  3HOZ C;  4BY1 C;  1Y1V K;  3HOZ K;  4BY1 K;  5M3F K;  5IP9 C;  2E2J C;  2E2H C;  4C3J C;  1I6H C;  2NVX C;  4A3L C;  2PA8 L;  4A3F C;  4MEX A;  4QJV B;  5IP9 K;  2E2J K;  4C3J K;  1YNN A;  2E2H K;  3S16 C;  3PO3 C;  3FKI C;  3K7A C;  4A3F K;  4YFX A;  2NVX K;  1IW7 A;  4A3L K;  3S16 K;  5IP7 C;  3FKI K;  4LK1 A;  3K7A K;  3PO3 K;  5IP7 K;  2VUM C;  1I3Q C;  2VUM K;  2JA8 C;  4NOI A;  4A3I C;  3GTG C;  2JA6 C;  4A3C C;  4X6A C;  2PA8 D;  2JA5 C;  1I3Q K;  3I4N C;  1HQM A;  3HOX K;  2JA8 K;  3GTG K;  4A3M C;  4Y7N K;  2JA6 K;  4A3C K;  2A68 A;  2JA5 K;  2PMZ L;  4Q4Z A;  3I4N K;  4X6A K;  4A3M K;  5M3M K;  2A6E A;  4C3H K;  1TWF C;  2A69 A;  3H0G C;  1K83 C;  4YFN A;  1TWF K;  3H0G K;  3HOU C;  1K83 K;  4QJV A;  2O5J A;  1SFO C;  4OIR A;  1SFO K;  3WOD A;  5IYB C;  4C3H C;  3I4M C;  2PMZ D;  2WB1 L;  4XLP A;  4OIP A;  2NVY C;  3S1R C;  4OIO A; 
#chains in the Genus database with same CATH topology
 1I6V A;  5TJ3 A;  1WOS A;  4Y52 C;  4A3K C;  2PHC B;  4Y52 K;  4A3K K;  3HOX C;  3HOV C;  5M5Y K;  1EQR A;  3HOV K;  4IO9 S;  1TWA A;  3HOW C;  4KDD A;  3HOW K;  3EQL A;  4G0U A;  4Q5S A;  3FKI A;  3GEE A;  2E2I C;  4GTB A;  2E2I K;  2O5I A;  3S1N C;  3ERE D;  3H3V D;  4LJZ A;  1WOP A;  4KB2 A;  3S1N K;  2KPU A;  2Y0S L;  5HL7 S;  3A8J A;  4A3E C;  3GEI A;  4GTA A;  4A3E K;  1WCM C;  3PIP S;  1K83 A;  1WCM K;  4KB4 A;  4P5A A;  2WAQ D;  2R92 K;  4YFK A;  1C0A A;  4U67 S;  4WFB S;  1FEU A;  1IS1 A;  1J98 A;  1JQW A;  1TWC C;  5E68 A;  2GSU A;  1YNJ A;  1TWC K;  1DD5 A;  3AD8 C;  3BP3 A;  2NVQ C;  4PAB A;  5IOT A;  1VH2 A;  3GTG A;  1EI6 A;  2NVQ K;  1G51 A;  2XCQ A;  1F93 A;  2W7V A;  2L5N A;  4J3N A;  1R9T C;  1L0W A;  4ILD A;  3CAG A;  2E2I A;  1R9T K;  3S15 C;  2CW0 A;  3GSI A;  3S15 K;  4PAA A;  2XCR B;  3QX3 A;  1Y1V C;  1Y1V K;  4GFQ A;  4C3J C;  1KQ4 A;  4QJV B;  4C3J K;  1WCM A;  4WF9 S;  1BGW A;  4LK1 A;  1I3Q C;  3N0B A;  4NOI A;  1I3Q K;  4X6A C;  1O2A A;  4KAR A;  2PA8 D;  3I4N C;  3N0C A;  4X6A K;  4Y7N K;  1USM A;  3TFJ A;  3L4J A;  3I4N K;  5JVG S;  1F9N A;  3A8K A;  1TWC A;  5IOR A;  3AD7 C;  3T01 A;  4YFN A;  1VGX A;  3G4C A;  1O26 A;  4OIR A;  3I4M C;  4C3H C;  2PMZ D;  3T02 A;  3S1R C;  4C3H K;  2CFA A;  3I4M K;  1B4B A;  1J6W A;  3S1R K;  1R9T A;  3RZD C;  2CFA B;  3RZD K;  2ZJQ S;  5L46 A;  5C44 C;  3HKZ D;  1Y1V A;  3N3Y A;  5C44 K;  3H3V L;  3GTK C;  3PO2 C;  3BP8 C;  1WSR A;  3GTK K;  3PO2 K;  4GTL A;  4GTC A;  3S2H C;  3S2H K;  3G4A A;  4KC6 A;  3S1Q C;  1PJ5 A;  2FQO A;  1B4A A;  1I3Q A;  4FZB A;  3S1Q K;  5TMF A;  5M5X K;  5TMC A;  2GAG C;  2WAQ L;  4XCH A;  1Y1W C;  4KMU A;  5DM7 S;  1Y1W K;  4C45 A;  1SMY A;  3CF5 S;  5IOS A;  1DCP A;  2D6F C;  2Y3P A;  4C3I K;  2ZUE A;  1V5V A;  3RZO K;  3TFH A;  1ZBS A;  3BUE A;  4WFN S;  1F7U A;  3IPJ A;  3TTG A;  3OPF A;  3SZZ A;  1BDF A;  4LR2 A;  1J6X A;  1O25 A;  3M3Y C;  4G7O A;  1EFW A;  3GTK A;  3AQO A;  3M3Y K;  4BY7 C;  1X31 C;  4A3I K;  3PIO S;  3HOY C;  5C4J C;  4BY7 K;  4MQ9 A;  3GTQ C;  1WQH A;  5C4J K;  3HOY K;  2R92 C;  3GTQ K;  1IE0 A;  3GDZ A;  4KAT A;  4XSZ A;  3AD9 C;  1JOE A;  3HOU K;  5DM6 S;  4BY1 C;  1Y1W A;  4BY1 K;  5M3F K;  2PA8 L;  2E2H C;  2ZUF A;  1I6H C;  2NVX C;  4A3L C;  3FOE A;  4MEX A;  2E2H K;  3L4K A;  2NVX K;  4A3L K;  3PO3 C;  1I6H K;  4YFX A;  3PO3 K;  2VUM C;  4LQY A;  2RGR A;  2VUM K;  2JA8 C;  1AB4 A;  2JH3 A;  3V4G A;  1HQM A;  4AH6 A;  2JA8 K;  3LPX A;  2A68 A;  2PMZ L;  1VJE A;  4GTD A;  1O28 A;  1TWF C;  3H0G C;  1TWF K;  1RU0 A;  3H0G K;  5JVO A;  3FOF A;  4KM8 A;  1BJT A;  4QJV A;  1SFO C;  1YX2 A;  3VA7 A;  1XXB A;  1SFO K;  1IL2 A;  5IYB C;  2XCO A;  4XLP A;  4OIP A;  2NVY C;  5FJ8 K;  3HKZ L;  5IYB K;  5EGH A;  1EH1 A;  1TWG C;  2NVY K;  2YU9 C;  4OIQ A;  3GTM C;  4A3J C;  1TWG K;  2YU9 K;  4G7H A;  4IOC S;  1XZP B;  3GTQ A;  1VLO A;  3GTM K;  4A3J K;  2R92 A;  4KM9 A;  5HQH A;  2R7Z C;  4Y7N C;  1PJ7 A;  2R7Z K;  4WFA S;  4ZH4 A;  4XSX A;  1ZVU A;  2KWA A;  4YG2 A;  2P8T A;  2E2H A;  5IYD K;  2NVX A;  1ZYR A;  1WOR A;  4BXX C;  4QIW D;  4A3D C;  5JFE A;  1XPP A;  4BXX K;  4A3D K;  5C3E C;  2VUM A;  5C3E K;  4KMD A;  3SZY A;  3CQZ C;  2RH6 A;  3CQZ K;  3NUH A;  3S14 C;  1XZQ B;  5JVH S;  1TWF A;  3S14 K;  3H0G A;  3TFI A;  3Q3Q A;  5HL8 A;  1SFO A;  4BBR K;  4A3B C;  1XXC A;  4AYB D;  2NVY A;  1WIH A;  4A3B K;  2R93 C;  4JK1 A;  1TWA C;  1TWG A;  4KN4 A;  2ZJP S;  2ZFZ A;  4G0W A;  2YU9 A;  2R93 K;  1TWA K;  3LAJ A;  3GTM A;  4FM9 A;  2FQT A;  2R7Z A;  2B63 C;  1O24 A;  5EGE A;  4P9S A;  2KQ1 A;  2B63 K;  2L3U A;  1TWH C;  3A8I A;  3T00 A;  1O2B A;  1TWH K;  2P5M A;  4BBS C;  2V6U A;  4BBS K;  4C3I C;  3GTL C;  4C2M C;  3GTL K;  3RZO C;  4C2M K;  3HOZ C;  3CQZ A;  3HOZ K;  2ZJR S;  2V6T A;  1BS2 A;  1USO A;  3HXA A;  1YNN A;  1WQG A;  1IQ0 A;  5IP7 C;  5IP7 K;  3GTG C;  4A3I C;  4A3C C;  2JA6 C;  3GEH A;  3HOX K;  2JA5 C;  3GTG K;  4A3C K;  2JA6 K;  2JA5 K;  2R93 A;  5M3M K;  3DLL S;  4GT9 A;  2KXY A;  3HOU C;  1INN A;  2O5J A;  2B63 A;  4WJ4 A;  1TWH A;  1O2F B;  4WCE S;  2NVT C;  4XLN A;  2NVT K;  4IOA S;  3MML B;  4KMH A;  3GTL A;  4BLA A;  1JVI A;  3GTP C;  1XXA A;  4QIW L;  1IBA A;  3DXJ A;  3GTP K;  2WB1 D;  3S2D C;  1GE9 A;  1HI9 A;  3S2D K;  4A3G C;  2V6S A;  4G0V A;  3S17 C;  4G7Z A;  4A3G K;  4A93 C;  4LK0 A;  1ZQ1 C;  3S17 K;  2JA7 C;  4WJ3 M;  2PPB A;  3ADA C;  4A93 K;  2JA7 K;  4MEY A;  3ORE A;  1I50 C;  1XZP A;  4KAW X;  2JA6 A;  1I50 K;  2JA5 A;  1UV7 A;  2EBB A;  3S1M C;  4AYB L;  3S1M K;  3LYW A;  4GTE A;  4BLB A;  4RMF A;  3S0X A;  5IYC C;  2A6H A;  2Y0S D;  1VRQ C;  4M1X A;  5IYD C;  4KN7 A;  5IYC K;  3GTJ C;  1ISE A;  3GTJ K;  5M5W K;  5C4X C;  3FHZ A;  2BE5 A;  5C4X K;  5D4D A;  1ZXO A;  3GTP A;  5FLM C;  3M4O C;  5CHP A;  1WQF A;  1XZQ A;  5FLM K;  1WOO A;  3M4O K;  1DCH A;  1J6V A;  4KMA A;  4LLG A;  1YCL A;  3GTO C;  3LAP A;  1F7V A;  3GTO K;  4GZY A;  1EK8 A;  1WSV A;  4BBR C;  2JA7 A;  4P5B A;  3OEP A;  4OIN A;  4LOW A;  3AQP A;  1I50 A;  2GAH C;  3GIR A;  5IP9 C;  2E2J C;  4BKW A;  4OIO A;  4A3F C;  5IP9 K;  2E2J K;  1DCO A;  3S16 C;  3FKI C;  3K7A C;  4A3F K;  1IW7 A;  1O27 A;  3S16 K;  3FKI K;  3K7A K;  4KAS A;  3JST A;  5IOQ A;  4GTF A;  3GTJ A;  4A3M C;  4Q4Z A;  1PJ6 A;  4A3M K;  3AH5 A;  2A6E A;  4O2D A;  2A69 A;  4WIL A;  4DDQ A;  1K83 C;  1O29 A;  1K83 K;  5CJ9 A;  3WOD A;  2GSN A;  2WB1 L;  3GTO A;  2GSO A; 
#chains in the Genus database with same CATH homology
 1I6V A;  2NVY K;  1TWG C;  5FJ8 K;  3S1R K;  2YU9 C;  4OIQ A;  2NVT C;  3GTM C;  5IYB K;  4A3J C;  4XLN A;  3RZD C;  4Y52 C;  4G7H A;  4A3K C;  1TWG K;  2YU9 K;  2NVT K;  3GTM K;  4A3J K;  3RZD K;  4Y52 K;  4A3K K;  4QIW L;  3GTP C;  3HOX C;  3HOV C;  5M5Y K;  3DXJ A;  2R7Z C;  3GTP K;  4Y7N C;  2WB1 D;  5C44 C;  3HOV K;  2R7Z K;  3HKZ D;  5C44 K;  4ZH4 A;  4XSX A;  3S2D C;  3H3V L;  4YG2 A;  3GTK C;  3HOW C;  3PO2 C;  3S2D K;  4A3G C;  3GTK K;  5IYD K;  3HOW K;  3PO2 K;  1ZYR A;  3EQL A;  3S17 C;  4G7Z A;  4A3G K;  4Q5S A;  4A93 C;  4LK0 A;  4QIW D;  3S2H C;  4BXX C;  4A3D C;  3S17 K;  2JA7 C;  2E2I C;  2PPB A;  1XPP A;  4A93 K;  3S2H K;  4BXX K;  4A3D K;  3S1Q C;  5C3E C;  2E2I K;  4MEY A;  2O5I A;  2JA7 K;  3S1N C;  3S1Q K;  5TMF A;  5C3E K;  1I50 C;  4LJZ A;  3H3V D;  5M5X K;  3S1N K;  5TMC A;  2WAQ L;  1I50 K;  3CQZ C;  1Y1W C;  2Y0S L;  4KMU A;  3CQZ K;  1Y1W K;  3S1M C;  4AYB L;  4A3E C;  3S14 C;  1I6H K;  1SMY A;  3S1M K;  4A3E K;  1WCM C;  3S14 K;  1WCM K;  2WAQ D;  5IYC C;  2A6H A;  4BBR K;  4C3I K;  2Y0S D;  4YFK A;  2R92 K;  5IYD C;  4KN7 A;  4A3B C;  5IYC K;  3HKZ L;  3GTJ C;  4AYB D;  3RZO K;  4A3B K;  2R93 C;  4JK1 A;  1TWA C;  3GTJ K;  5M5W K;  4KN4 A;  5C4X C;  2R93 K;  2BE5 A;  1TWA K;  5C4X K;  5D4D A;  1TWC C;  1YNJ A;  1TWC K;  1BDF A;  5FLM C;  3M4O C;  2NVQ C;  5FLM K;  2B63 C;  2NVQ K;  3M4O K;  3M3Y C;  4G7O A;  2B63 K;  1TWH C;  4LLG A;  3GTO C;  3M3Y K;  4BY7 C;  1TWH K;  4A3I K;  3GTO K;  4BBS C;  3HOY C;  5C4J C;  4GZY A;  4BY7 K;  1R9T C;  4MQ9 A;  4BBS K;  3GTQ C;  4BBR C;  4C3I C;  5C4J K;  1R9T K;  2R92 C;  3HOY K;  3S15 C;  2CW0 A;  3GTL C;  3I4M K;  4C2M C;  3GTQ K;  4OIN A;  3S15 K;  4XSZ A;  3GTL K;  3RZO C;  4C2M K;  3HOU K;  1Y1V C;  3HOZ C;  4BY1 C;  1Y1V K;  3HOZ K;  4BY1 K;  5M3F K;  5IP9 C;  2E2J C;  2E2H C;  4C3J C;  1I6H C;  2NVX C;  4A3L C;  2PA8 L;  4A3F C;  4MEX A;  4QJV B;  5IP9 K;  2E2J K;  4C3J K;  1YNN A;  2E2H K;  3S16 C;  3PO3 C;  3FKI C;  3K7A C;  4A3F K;  4YFX A;  2NVX K;  1IW7 A;  4A3L K;  3S16 K;  5IP7 C;  3FKI K;  4LK1 A;  3K7A K;  3PO3 K;  5IP7 K;  2VUM C;  1I3Q C;  2VUM K;  2JA8 C;  4NOI A;  4A3I C;  3GTG C;  2JA6 C;  4A3C C;  4X6A C;  2PA8 D;  2JA5 C;  1I3Q K;  3I4N C;  1HQM A;  3HOX K;  2JA8 K;  3GTG K;  4A3M C;  4Y7N K;  2JA6 K;  4A3C K;  2A68 A;  2JA5 K;  2PMZ L;  4Q4Z A;  3I4N K;  4X6A K;  4A3M K;  5M3M K;  2A6E A;  4C3H K;  1TWF C;  2A69 A;  3H0G C;  1K83 C;  4YFN A;  1TWF K;  3H0G K;  3HOU C;  1K83 K;  4QJV A;  2O5J A;  1SFO C;  4OIR A;  1SFO K;  3WOD A;  5IYB C;  4C3H C;  3I4M C;  2PMZ D;  2WB1 L;  4XLP A;  4OIP A;  2NVY C;  3S1R C;  4OIO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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