3S2HC

Rna polymerase ii initiation complex with a 6-nt rna containing a 2[prime]-iodo atp
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s2hC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s2hC01
3S2HC 3HOXC 2A6EA 5IYDC 3FKIC 4Y52C 4A3EC 4XLPA 4A93K 3RZDC 3H0GC 4LJZA 4X6AC 4XSZA 1TWAK 2YU9K 4A3IC 3GTJC 1BDFA 4GZYA 4BXXK 4LK0A 3HOXK 5M5XK 3CQZK 5TMFA 4A3JC 5TMCA 2E2IK 1TWFK 2E2HC 3GTKK 4BY7K 3GTOC 3HOUK 4C3HK 4X6AK 4C3IK 4A3FK 4C2MC 4A3GK 1ZYRA 4OIQA 2NVTC 2Y0SD 4BBSC 4A3IK 2R7ZC 3H3VD 4BXXC 3GTLK 3HOYC 4JK1A 3S17C 3M3YK 3CQZC 2E2IC 4A3JK 1Y1VK 4BY7C 3GTOK 3S16K 4A3CK 4MQ9A 2A69A 4C3IC 4A3FC 1TWHC 4OIRA 2NVTK 3GTQK 4A3KK 4Q5SA 1TWCC 1K83K 4BBRK 5IYCC 1I6HC 5C3EC 1TWGC 3RZOC 3S1MC 4MEXA 2B63C 4OIPA 2O5IA 2JA6C 3HOWC 4A3BK 3S14C 3I4NC 1I6HK 4XSXA 4BY1C 5IP9K 3H3VL 3GTMC 3S1MK 1YNJA 3I4MC 3K7AK 1R9TC 1Y1WK 2NVQC 4A3BC 4A3DK 3I4NK 4C3JC 3S1QK 2NVXC 5D4DA 5IYBK 3S1RK 4G7OA 3HOZC 2R92C 2JA5C 3GTMK 2JA8C 2R93K 5C4XK 2JA7K 2A68A 3K7AC 1R9TK 3GTGK 3HOVC 2WB1L 5M5WK 1Y1WC 2NVQK 4A3LK 1I50C 4A3MC 4YFXA 1HQMA 3S1QC 4C3JK 3PO3K 5M3FK 5IYDK 4A3EK 2PPBA 3PO2K 3S2DC 2JA5K 3H0GK 3S1NC 4MEYA 2WAQD 2JA7C 4QIWL 1SMYA 4LLGA 4XLNA 4QJVA 3GTPC 4A3MK 3PO3C 2PMZL 4Y52K 4Q4ZA 2E2HK 3RZDK 5FLMC 3S2DK 4YFNA 4C3HC 1TWAC 2YU9C 5C4JK 5M5YK 1IW7A 1SFOK 3GTJK 4AYBD 3WODA 4YFKA 3GTLC 2R7ZK 3GTPK 2WB1D 3M3YC 1TWFC 2VUMC 3GTKC 1WCMK 4QJVB 1Y1VC 3HOUC 5C44K 3S17K 5FLMK 3S16C 4C2MK 4A3CC 4A3GC 5C4JC 1SFOC 1I3QK 1TWHK 5FJ8K 4BBSK 1XPPA 3HOYK 4A3KC 4QIWD 4G7ZA 2BE5A 2WAQL 4BBRC 5IYCK 1WCMC 5C44C 2VUMK 5C3EK 2PA8D 4Y7NC 2PMZD 1I6VA 4LK1A 2E2JK 1I3QC 3HKZD 3GTQC 3HOWK 1K83C 1TWCK 2NVYK 1TWGK 3RZOK 4AYBL 2B63K 5IP9C 2E2JC 2O5JA 4Y7NK 2JA6K 3I4MK 3S14K 3DXJA 5IP7C 3M4OC 4A3DC 4A3LC 2NVYC 3S1RC 4BY1K 4G7HA 3S15K 2R92K 3EQLA 1YNNA 5C4XC 4OIOA 2CW0A 4KN4A 3HOVK 2PA8L 3S2HK 5IP7K 3M4OK 2NVXK 1I50K 2A6HA 5IYBC 3FKIK 4KMUA 3HKZL 3HOZK 4YG2A 4ZH4A 4A93C 3S15C 2Y0SL 2JA8K 3PO2C 2R93C 4OINA 5M3MK 3GTGC 3S1NK 4KN7A 4NOIA
chains in the Genus database with same CATH superfamily
3OPFA 2JA7A 4A3EC 3H0GC 4LJZA 5CJ9A 1TWAK 4A3IC 5TMFA 5DM6S 5TMCA 4A3JC 1TWFK 2E2HC 3A8IA 3HXAA 3GTKK 4C2MC 5JVGS 4WFAS 1ZYRA 2Y0SD 3GTLK 1USOA 1JOEA 3CQZC 3BUEA 1Y1VK 3GSIA 4WCES 3S16K 2A69A 3AH5A 1TWHC 4OIRA 4GTAA 4BKWA 1O28A 2NVTK 3GTQK 3SZZA 4A3KK 4Q5SA 4BBRK 4KMHA 1WSRA 2O5IA 2V6UA 3S14C 1IE0A 5HL7S 5IORA 3ADAC 3GTMC 3S1MK 1R9TC 4IOCS 1VJEA 4GTDA 2NVXC 3S1RK 4G7OA 2W7VA 2R92C 4KAWX 2JA8C 5C4XK 5M5WK 1Y1WC 2NVQK 1R9TA 1HQMA 3PO3K 3VA7A 5M3FK 5IYDK 2PPBA 3PO2K 2NVXA 3S1NC 4MEYA 2JA7C 1J6XA 4QJVA 4Y52K 5L46A 5EGEA 1L0WA 1K83A 1EQRA 3S2DK 3G4CA 3CAGA 1IW7A 1O24A 2ZJRS 3S17K 1WCMK 2JH3A 3SZYA 2KPUA 4A3CC 1SFOC 5FJ8K 1EI6A 2CFAB 1RU0A 1XPPA 3A8JA 4KMAA 5IYCK 3GTOA 2P5MA 2PA8D 2PMZD 3HKZD 1XZPB 1IBAA 4G0WA 4AYBL 3AD9C 5IP9C 3DXJA 3M4OC 3GTMA 2R93A 3EQLA 1YNNA 4KN4A 3HOVK 2JA5A 2FQOA 2A6HA 4KMUA 2RH6A 4YG2A 4ZH4A 1O2BA 3S15C 2Y0SL 3G4AA 1WORA 1J6WA 3CQZA 4KN7A 4NOIA 1DCOA 3RZDC 3OEPA 3LYWA 2R7ZA 3GTPA 3NUHA 4GZYA 4KB2A 3HOXK 5M5XK 3CQZK 2E2HA 3LPXA 3HOUK 4A3GK 2NVTC 4BBSC 3N0CA 4BXXC 1INNA 3HOYC 4JK1A 3M3YK 2E2IC 4MQ9A 4LR2A 4C3IC 4A3FC 1O2FB 2P8TA 2ZUEA 4KM8A 4M1XA 4KMDA 1GE9A 5C3EC 3RZOC 2KWAA 3S1MC 2B63C 3TFJA 4OIPA 3HOWC 4WJ4A 1WSVA 1VLOA 2RGRA 3AQOA 4O2DA 5IOTA 3GIRA 4BY1C 3GEIA 1I6HK 1WQHA 2VUMA 2L3UA 4G0UA 3I4MC 4LOWA 1Y1WK 3GTGA 2NVQC 3I4NK 1XZPA 1B4BA 4P5BA 4AH6A 2R93K 2JA7K 3GTGK 1Y1WA 4PABA 5DM7S 1I50C 3S1QC 3GDZA 4C3JK 2JA6A 4KDDA 3S2DC 2JA5K 1J98A 5JFEA 4QIWL 1EH1A 4LLGA 3H0GA 4XLNA 4GTBA 4Q4ZA 3A8KA 2E2IA 4C3HC 1TWAC 1SFOK 5M5YK 4KATA 4YFKA 2EBBA 4C45A 2R7ZK 3GTPK 2WB1D 1TWFC 3GTKC 1XZQB 4P5AA 1DCPA 5FLMK 4C2MK 5C4JC 4WILA 1ZVUA 1YX2A 2BE5A 5C44C 2VUMK 1I6VA 4LK1A 1WOPA 3GTQC 1O27A 2GSOA 3T00A 1WCMA 2PHCB 4KASA 3S14K 3GTQA 5JVHS 4A3DC 2CFAA 1C0AA 1DCHA 4WFNS 3S15K 4KARA 1AB4A 4OIOA 2CW0A 3TFIA 5IP7K 2NVXK 5CHPA 1USMA 2JA8K 4OINA 3BP8C 3MMLB 3GEEA 1XXCA 2YU9A 1SMYA 1ZBSA 2ZJQS 3HOXC 3S2HC 2A6EA 1BS2A 5IYDC 1F7VA 4XLPA 4XSZA 2D6FC 2YU9K 2ZJPS 3GTJC 1BDFA 4BXXK 4G0VA 4LK0A 2E2IK 4J3NA 4GTLA 1IS1A 4X6AK 4C3IK 4A3FK 4OIQA 3S17C 2L5NA 3T01A 4BY7C 3GTOK 4A3CK 1X31C 2KQ1A 3AQPA 1WQGA 1TWCC 1K83K 1I3QA 5IYCC 1Y1VA 1I6HC 1TWGC 2JA6C 1O29A 4IO9S 4XCHA 3PIOS 3I4NC 4XSXA 5IP9K 2ZUFA 3H3VL 1PJ6A 1FEUA 4A3BC 4C3JC 5E68A 3FHZA 3S1QK 5IYBK 2FQTA 3HOZC 2JA5C 3K7AC 3HOVC 2WB1L 3TTGA 4A3LK 1ISEA 1XXAA 3S0XA 1PJ5A 4A3EK 2ZFZA 1F9NA 3H0GK 2WAQD 3GTLA 3FOFA 3GTPC 4A3MK 3JSTA 2E2HK 3RZDK 5FLMC 5HL8A 5C4JK 4IOAS 3GTLC 1JVIA 4QJVB 2VUMC 5C44K 1Y1VC 3HOUC 3S16C 4A3GC 1BGWA 1ZQ1C 1TWHK 4BBSK 3HOYK 4A3KC 4QIWD 4G7ZA 4BBRC 4GFQA 4DDQA 3AD8C 4BLAA 1I3QC 2XCQA 2XCRB 3BP3A 1PJ7A 1ZXOA 3RZOK 1VRQC 2B63K 3DLLS 2E2JC 5HQHA 4Y7NK 5EGHA 5IP7C 1WOSA 2NVYC 3S1RC 4BY1K 1EK8A 2B63A 4G7HA 2R92K 2V6TA 5C4XC 1XZQA 3S2HK 1BJTA 5TJ3A 3ERED 4GT9A 1TWFA 3GTKA 3PO2C 2R93C 4FZBA 1IL2A 3GTGC 3S1NK 2XCOA 5IOSA 4PAAA 1TWHA 3FKIC 4Y52C 3FOEA 4A93K 4X6AC 3OREA 4WFBS 1G51A 3AD7C 5JVOA 1XXBA 3QX3A 2GSUA 4KB4A 4WJ3M 3FKIA 4BY7K 3GTOC 1VH2A 4C3HK 1F7UA 1J6VA 4LQYA 4GTCA 4A3IK 2R7ZC 3H3VD 3V4GA 3LAPA 4KC6A 2GAGC 4A3JK 3GEHA 1UV7A 4FM9A 1EFWA 2NVYA 4MEXA 1WQFA 1IQ0A 4A3BK 4BLBA 4KM9A 2GAHC 2V6SA 1YNJA 3K7AK 1I50A 3L4JA 4A3DK 2GSNA 5D4DA 2R92A 1KQ4A 3GTMK 2A68A 1R9TK 3TFHA 4A3MC 4YFXA 1SFOA 4GTEA 4ILDA 3PO3C 2PMZL 4RMFA 3N0BA 2Y3PA 1HI9A 4YFNA 2YU9C 3GTJK 4AYBD 3WODA 3IPJA 1WIHA 3Q3QA 3M3YC 1DD5A 4U67S 1TWCA 1I3QK 3GTJA 3L4KA 2WAQL 4GTFA 5IOQA 4WF9S 3T02A 1WCMC 5C3EK 1JQWA 4Y7NC 2E2JK 3N3YA 3HOWK 1K83C 1TWCK 2NVYK 1O26A 1TWGK 1B4AA 1V5VA 2O5JA 2JA6K 3I4MK 1O25A 4P9SA 2KXYA 1TWGA 3CF5S 1YCLA 3LAJA 2PA8L 1O2AA 3M4OK 1I50K 5IYBC 3PIPS 3FKIK 3HKZL 1F93A 3HOZK 4A93C 1WOOA 1VGXA 5M3MK 1TWAA 4A3LC
chains in the Genus database with same CATH topology
3S2HC 3HOXC 2A6EA 5IYDC 3FKIC 4Y52C 4A3EC 4XLPA 4A93K 3RZDC 3H0GC 4LJZA 4X6AC 4XSZA 1TWAK 2YU9K 4A3IC 3GTJC 1BDFA 4GZYA 4BXXK 4LK0A 3HOXK 5M5XK 3CQZK 5TMFA 4A3JC 5TMCA 2E2IK 1TWFK 2E2HC 3GTKK 4BY7K 3GTOC 3HOUK 4C3HK 4X6AK 4C3IK 4A3FK 4C2MC 4A3GK 1ZYRA 4OIQA 2NVTC 2Y0SD 4BBSC 4A3IK 2R7ZC 3H3VD 4BXXC 3GTLK 3HOYC 4JK1A 3S17C 3M3YK 3CQZC 2E2IC 4A3JK 1Y1VK 4BY7C 3GTOK 3S16K 4A3CK 4MQ9A 2A69A 4C3IC 4A3FC 1TWHC 4OIRA 2NVTK 3GTQK 4A3KK 4Q5SA 1TWCC 1K83K 4BBRK 5IYCC 1I6HC 5C3EC 1TWGC 3RZOC 3S1MC 4MEXA 2B63C 4OIPA 2O5IA 2JA6C 3HOWC 4A3BK 3S14C 3I4NC 1I6HK 4XSXA 4BY1C 5IP9K 3H3VL 3GTMC 3S1MK 1YNJA 3I4MC 3K7AK 1R9TC 1Y1WK 2NVQC 4A3BC 4A3DK 3I4NK 4C3JC 3S1QK 2NVXC 5D4DA 5IYBK 3S1RK 4G7OA 3HOZC 2R92C 2JA5C 3GTMK 2JA8C 2R93K 5C4XK 2JA7K 2A68A 3K7AC 1R9TK 3GTGK 3HOVC 2WB1L 5M5WK 1Y1WC 2NVQK 4A3LK 1I50C 4A3MC 4YFXA 1HQMA 3S1QC 4C3JK 3PO3K 5M3FK 5IYDK 4A3EK 2PPBA 3PO2K 3S2DC 2JA5K 3H0GK 3S1NC 4MEYA 2WAQD 2JA7C 4QIWL 1SMYA 4LLGA 4XLNA 4QJVA 3GTPC 4A3MK 3PO3C 2PMZL 4Y52K 4Q4ZA 2E2HK 3RZDK 5FLMC 3S2DK 4YFNA 4C3HC 1TWAC 2YU9C 5C4JK 5M5YK 1IW7A 1SFOK 3GTJK 4AYBD 3WODA 4YFKA 3GTLC 2R7ZK 3GTPK 2WB1D 3M3YC 1TWFC 2VUMC 3GTKC 1WCMK 4QJVB 1Y1VC 3HOUC 5C44K 3S17K 5FLMK 3S16C 4C2MK 4A3CC 4A3GC 5C4JC 1SFOC 1I3QK 1TWHK 5FJ8K 4BBSK 1XPPA 3HOYK 4A3KC 4QIWD 4G7ZA 2BE5A 2WAQL 4BBRC 5IYCK 1WCMC 5C44C 2VUMK 5C3EK 2PA8D 4Y7NC 2PMZD 1I6VA 4LK1A 2E2JK 1I3QC 3HKZD 3GTQC 3HOWK 1K83C 1TWCK 2NVYK 1TWGK 3RZOK 4AYBL 2B63K 5IP9C 2E2JC 2O5JA 4Y7NK 2JA6K 3I4MK 3S14K 3DXJA 5IP7C 3M4OC 4A3DC 4A3LC 2NVYC 3S1RC 4BY1K 4G7HA 3S15K 2R92K 3EQLA 1YNNA 5C4XC 4OIOA 2CW0A 4KN4A 3HOVK 2PA8L 3S2HK 5IP7K 3M4OK 2NVXK 1I50K 2A6HA 5IYBC 3FKIK 4KMUA 3HKZL 3HOZK 4YG2A 4ZH4A 4A93C 3S15C 2Y0SL 2JA8K 3PO2C 2R93C 4OINA 5M3MK 3GTGC 3S1NK 4KN7A 4NOIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S2H C;  3HOX C;  2A6E A;  5IYD C;  3FKI C;  4Y52 C;  4A3E C;  4XLP A;  4A93 K;  3RZD C;  3H0G C;  4LJZ A;  4X6A C;  4XSZ A;  1TWA K;  2YU9 K;  4A3I C;  3GTJ C;  1BDF A;  4GZY A;  4BXX K;  4LK0 A;  3HOX K;  5M5X K;  3CQZ K;  5TMF A;  4A3J C;  5TMC A;  2E2I K;  1TWF K;  2E2H C;  3GTK K;  4BY7 K;  3GTO C;  3HOU K;  4C3H K;  4X6A K;  4C3I K;  4A3F K;  4C2M C;  4A3G K;  1ZYR A;  4OIQ A;  2NVT C;  2Y0S D;  4BBS C;  4A3I K;  2R7Z C;  3H3V D;  4BXX C;  3GTL K;  3HOY C;  4JK1 A;  3S17 C;  3M3Y K;  3CQZ C;  2E2I C;  4A3J K;  1Y1V K;  4BY7 C;  3GTO K;  3S16 K;  4A3C K;  4MQ9 A;  2A69 A;  4C3I C;  4A3F C;  1TWH C;  4OIR A;  2NVT K;  3GTQ K;  4A3K K;  4Q5S A;  1TWC C;  1K83 K;  4BBR K;  5IYC C;  1I6H C;  5C3E C;  1TWG C;  3RZO C;  3S1M C;  4MEX A;  2B63 C;  4OIP A;  2O5I A;  2JA6 C;  3HOW C;  4A3B K;  3S14 C;  3I4N C;  1I6H K;  4XSX A;  4BY1 C;  5IP9 K;  3H3V L;  3GTM C;  3S1M K;  1YNJ A;  3I4M C;  3K7A K;  1R9T C;  1Y1W K;  2NVQ C;  4A3B C;  4A3D K;  3I4N K;  4C3J C;  3S1Q K;  2NVX C;  5D4D A;  5IYB K;  3S1R K;  4G7O A;  3HOZ C;  2R92 C;  2JA5 C;  3GTM K;  2JA8 C;  2R93 K;  5C4X K;  2JA7 K;  2A68 A;  3K7A C;  1R9T K;  3GTG K;  3HOV C;  2WB1 L;  5M5W K;  1Y1W C;  2NVQ K;  4A3L K;  1I50 C;  4A3M C;  4YFX A;  1HQM A;  3S1Q C;  4C3J K;  3PO3 K;  5M3F K;  5IYD K;  4A3E K;  2PPB A;  3PO2 K;  3S2D C;  2JA5 K;  3H0G K;  3S1N C;  4MEY A;  2WAQ D;  2JA7 C;  4QIW L;  1SMY A;  4LLG A;  4XLN A;  4QJV A;  3GTP C;  4A3M K;  3PO3 C;  2PMZ L;  4Y52 K;  4Q4Z A;  2E2H K;  3RZD K;  5FLM C;  3S2D K;  4YFN A;  4C3H C;  1TWA C;  2YU9 C;  5C4J K;  5M5Y K;  1IW7 A;  1SFO K;  3GTJ K;  4AYB D;  3WOD A;  4YFK A;  3GTL C;  2R7Z K;  3GTP K;  2WB1 D;  3M3Y C;  1TWF C;  2VUM C;  3GTK C;  1WCM K;  4QJV B;  1Y1V C;  3HOU C;  5C44 K;  3S17 K;  5FLM K;  3S16 C;  4C2M K;  4A3C C;  4A3G C;  5C4J C;  1SFO C;  1I3Q K;  1TWH K;  5FJ8 K;  4BBS K;  1XPP A;  3HOY K;  4A3K C;  4QIW D;  4G7Z A;  2BE5 A;  2WAQ L;  4BBR C;  5IYC K;  1WCM C;  5C44 C;  2VUM K;  5C3E K;  2PA8 D;  4Y7N C;  2PMZ D;  1I6V A;  4LK1 A;  2E2J K;  1I3Q C;  3HKZ D;  3GTQ C;  3HOW K;  1K83 C;  1TWC K;  2NVY K;  1TWG K;  3RZO K;  4AYB L;  2B63 K;  5IP9 C;  2E2J C;  2O5J A;  4Y7N K;  2JA6 K;  3I4M K;  3S14 K;  3DXJ A;  5IP7 C;  3M4O C;  4A3D C;  4A3L C;  2NVY C;  3S1R C;  4BY1 K;  4G7H A;  3S15 K;  2R92 K;  3EQL A;  1YNN A;  5C4X C;  4OIO A;  2CW0 A;  4KN4 A;  3HOV K;  2PA8 L;  3S2H K;  5IP7 K;  3M4O K;  2NVX K;  1I50 K;  2A6H A;  5IYB C;  3FKI K;  4KMU A;  3HKZ L;  3HOZ K;  4YG2 A;  4ZH4 A;  4A93 C;  3S15 C;  2Y0S L;  2JA8 K;  3PO2 C;  2R93 C;  4OIN A;  5M3M K;  3GTG C;  3S1N K;  4KN7 A;  4NOI A; 
#chains in the Genus database with same CATH topology
 3OPF A;  2JA7 A;  4A3E C;  3H0G C;  4LJZ A;  5CJ9 A;  1TWA K;  4A3I C;  5TMF A;  5DM6 S;  5TMC A;  4A3J C;  1TWF K;  2E2H C;  3A8I A;  3HXA A;  3GTK K;  4C2M C;  5JVG S;  4WFA S;  1ZYR A;  2Y0S D;  3GTL K;  1USO A;  1JOE A;  3CQZ C;  3BUE A;  1Y1V K;  3GSI A;  4WCE S;  3S16 K;  2A69 A;  3AH5 A;  1TWH C;  4OIR A;  4GTA A;  4BKW A;  1O28 A;  2NVT K;  3GTQ K;  3SZZ A;  4A3K K;  4Q5S A;  4BBR K;  4KMH A;  1WSR A;  2O5I A;  2V6U A;  3S14 C;  1IE0 A;  5HL7 S;  5IOR A;  3ADA C;  3GTM C;  3S1M K;  1R9T C;  4IOC S;  1VJE A;  4GTD A;  2NVX C;  3S1R K;  4G7O A;  2W7V A;  2R92 C;  4KAW X;  2JA8 C;  5C4X K;  5M5W K;  1Y1W C;  2NVQ K;  1R9T A;  1HQM A;  3PO3 K;  3VA7 A;  5M3F K;  5IYD K;  2PPB A;  3PO2 K;  2NVX A;  3S1N C;  4MEY A;  2JA7 C;  1J6X A;  4QJV A;  4Y52 K;  5L46 A;  5EGE A;  1L0W A;  1K83 A;  1EQR A;  3S2D K;  3G4C A;  3CAG A;  1IW7 A;  1O24 A;  2ZJR S;  3S17 K;  1WCM K;  2JH3 A;  3SZY A;  2KPU A;  4A3C C;  1SFO C;  5FJ8 K;  1EI6 A;  2CFA B;  1RU0 A;  1XPP A;  3A8J A;  4KMA A;  5IYC K;  3GTO A;  2P5M A;  2PA8 D;  2PMZ D;  3HKZ D;  1XZP B;  1IBA A;  4G0W A;  4AYB L;  3AD9 C;  5IP9 C;  3DXJ A;  3M4O C;  3GTM A;  2R93 A;  3EQL A;  1YNN A;  4KN4 A;  3HOV K;  2JA5 A;  2FQO A;  2A6H A;  4KMU A;  2RH6 A;  4YG2 A;  4ZH4 A;  1O2B A;  3S15 C;  2Y0S L;  3G4A A;  1WOR A;  1J6W A;  3CQZ A;  4KN7 A;  4NOI A;  1DCO A;  3RZD C;  3OEP A;  3LYW A;  2R7Z A;  3GTP A;  3NUH A;  4GZY A;  4KB2 A;  3HOX K;  5M5X K;  3CQZ K;  2E2H A;  3LPX A;  3HOU K;  4A3G K;  2NVT C;  4BBS C;  3N0C A;  4BXX C;  1INN A;  3HOY C;  4JK1 A;  3M3Y K;  2E2I C;  4MQ9 A;  4LR2 A;  4C3I C;  4A3F C;  1O2F B;  2P8T A;  2ZUE A;  4KM8 A;  4M1X A;  4KMD A;  1GE9 A;  5C3E C;  3RZO C;  2KWA A;  3S1M C;  2B63 C;  3TFJ A;  4OIP A;  3HOW C;  4WJ4 A;  1WSV A;  1VLO A;  2RGR A;  3AQO A;  4O2D A;  5IOT A;  3GIR A;  4BY1 C;  3GEI A;  1I6H K;  1WQH A;  2VUM A;  2L3U A;  4G0U A;  3I4M C;  4LOW A;  1Y1W K;  3GTG A;  2NVQ C;  3I4N K;  1XZP A;  1B4B A;  4P5B A;  4AH6 A;  2R93 K;  2JA7 K;  3GTG K;  1Y1W A;  4PAB A;  5DM7 S;  1I50 C;  3S1Q C;  3GDZ A;  4C3J K;  2JA6 A;  4KDD A;  3S2D C;  2JA5 K;  1J98 A;  5JFE A;  4QIW L;  1EH1 A;  4LLG A;  3H0G A;  4XLN A;  4GTB A;  4Q4Z A;  3A8K A;  2E2I A;  4C3H C;  1TWA C;  1SFO K;  5M5Y K;  4KAT A;  4YFK A;  2EBB A;  4C45 A;  2R7Z K;  3GTP K;  2WB1 D;  1TWF C;  3GTK C;  1XZQ B;  4P5A A;  1DCP A;  5FLM K;  4C2M K;  5C4J C;  4WIL A;  1ZVU A;  1YX2 A;  2BE5 A;  5C44 C;  2VUM K;  1I6V A;  4LK1 A;  1WOP A;  3GTQ C;  1O27 A;  2GSO A;  3T00 A;  1WCM A;  2PHC B;  4KAS A;  3S14 K;  3GTQ A;  5JVH S;  4A3D C;  2CFA A;  1C0A A;  1DCH A;  4WFN S;  3S15 K;  4KAR A;  1AB4 A;  4OIO A;  2CW0 A;  3TFI A;  5IP7 K;  2NVX K;  5CHP A;  1USM A;  2JA8 K;  4OIN A;  3BP8 C;  3MML B;  3GEE A;  1XXC A;  2YU9 A;  1SMY A;  1ZBS A;  2ZJQ S;  3HOX C;  3S2H C;  2A6E A;  1BS2 A;  5IYD C;  1F7V A;  4XLP A;  4XSZ A;  2D6F C;  2YU9 K;  2ZJP S;  3GTJ C;  1BDF A;  4BXX K;  4G0V A;  4LK0 A;  2E2I K;  4J3N A;  4GTL A;  1IS1 A;  4X6A K;  4C3I K;  4A3F K;  4OIQ A;  3S17 C;  2L5N A;  3T01 A;  4BY7 C;  3GTO K;  4A3C K;  1X31 C;  2KQ1 A;  3AQP A;  1WQG A;  1TWC C;  1K83 K;  1I3Q A;  5IYC C;  1Y1V A;  1I6H C;  1TWG C;  2JA6 C;  1O29 A;  4IO9 S;  4XCH A;  3PIO S;  3I4N C;  4XSX A;  5IP9 K;  2ZUF A;  3H3V L;  1PJ6 A;  1FEU A;  4A3B C;  4C3J C;  5E68 A;  3FHZ A;  3S1Q K;  5IYB K;  2FQT A;  3HOZ C;  2JA5 C;  3K7A C;  3HOV C;  2WB1 L;  3TTG A;  4A3L K;  1ISE A;  1XXA A;  3S0X A;  1PJ5 A;  4A3E K;  2ZFZ A;  1F9N A;  3H0G K;  2WAQ D;  3GTL A;  3FOF A;  3GTP C;  4A3M K;  3JST A;  2E2H K;  3RZD K;  5FLM C;  5HL8 A;  5C4J K;  4IOA S;  3GTL C;  1JVI A;  4QJV B;  2VUM C;  5C44 K;  1Y1V C;  3HOU C;  3S16 C;  4A3G C;  1BGW A;  1ZQ1 C;  1TWH K;  4BBS K;  3HOY K;  4A3K C;  4QIW D;  4G7Z A;  4BBR C;  4GFQ A;  4DDQ A;  3AD8 C;  4BLA A;  1I3Q C;  2XCQ A;  2XCR B;  3BP3 A;  1PJ7 A;  1ZXO A;  3RZO K;  1VRQ C;  2B63 K;  3DLL S;  2E2J C;  5HQH A;  4Y7N K;  5EGH A;  5IP7 C;  1WOS A;  2NVY C;  3S1R C;  4BY1 K;  1EK8 A;  2B63 A;  4G7H A;  2R92 K;  2V6T A;  5C4X C;  1XZQ A;  3S2H K;  1BJT A;  5TJ3 A;  3ERE D;  4GT9 A;  1TWF A;  3GTK A;  3PO2 C;  2R93 C;  4FZB A;  1IL2 A;  3GTG C;  3S1N K;  2XCO A;  5IOS A;  4PAA A;  1TWH A;  3FKI C;  4Y52 C;  3FOE A;  4A93 K;  4X6A C;  3ORE A;  4WFB S;  1G51 A;  3AD7 C;  5JVO A;  1XXB A;  3QX3 A;  2GSU A;  4KB4 A;  4WJ3 M;  3FKI A;  4BY7 K;  3GTO C;  1VH2 A;  4C3H K;  1F7U A;  1J6V A;  4LQY A;  4GTC A;  4A3I K;  2R7Z C;  3H3V D;  3V4G A;  3LAP A;  4KC6 A;  2GAG C;  4A3J K;  3GEH A;  1UV7 A;  4FM9 A;  1EFW A;  2NVY A;  4MEX A;  1WQF A;  1IQ0 A;  4A3B K;  4BLB A;  4KM9 A;  2GAH C;  2V6S A;  1YNJ A;  3K7A K;  1I50 A;  3L4J A;  4A3D K;  2GSN A;  5D4D A;  2R92 A;  1KQ4 A;  3GTM K;  2A68 A;  1R9T K;  3TFH A;  4A3M C;  4YFX A;  1SFO A;  4GTE A;  4ILD A;  3PO3 C;  2PMZ L;  4RMF A;  3N0B A;  2Y3P A;  1HI9 A;  4YFN A;  2YU9 C;  3GTJ K;  4AYB D;  3WOD A;  3IPJ A;  1WIH A;  3Q3Q A;  3M3Y C;  1DD5 A;  4U67 S;  1TWC A;  1I3Q K;  3GTJ A;  3L4K A;  2WAQ L;  4GTF A;  5IOQ A;  4WF9 S;  3T02 A;  1WCM C;  5C3E K;  1JQW A;  4Y7N C;  2E2J K;  3N3Y A;  3HOW K;  1K83 C;  1TWC K;  2NVY K;  1O26 A;  1TWG K;  1B4A A;  1V5V A;  2O5J A;  2JA6 K;  3I4M K;  1O25 A;  4P9S A;  2KXY A;  1TWG A;  3CF5 S;  1YCL A;  3LAJ A;  2PA8 L;  1O2A A;  3M4O K;  1I50 K;  5IYB C;  3PIP S;  3FKI K;  3HKZ L;  1F93 A;  3HOZ K;  4A93 C;  1WOO A;  1VGX A;  5M3M K;  1TWA A;  4A3L C; 
#chains in the Genus database with same CATH homology
 3S2H C;  3HOX C;  2A6E A;  5IYD C;  3FKI C;  4Y52 C;  4A3E C;  4XLP A;  4A93 K;  3RZD C;  3H0G C;  4LJZ A;  4X6A C;  4XSZ A;  1TWA K;  2YU9 K;  4A3I C;  3GTJ C;  1BDF A;  4GZY A;  4BXX K;  4LK0 A;  3HOX K;  5M5X K;  3CQZ K;  5TMF A;  4A3J C;  5TMC A;  2E2I K;  1TWF K;  2E2H C;  3GTK K;  4BY7 K;  3GTO C;  3HOU K;  4C3H K;  4X6A K;  4C3I K;  4A3F K;  4C2M C;  4A3G K;  1ZYR A;  4OIQ A;  2NVT C;  2Y0S D;  4BBS C;  4A3I K;  2R7Z C;  3H3V D;  4BXX C;  3GTL K;  3HOY C;  4JK1 A;  3S17 C;  3M3Y K;  3CQZ C;  2E2I C;  4A3J K;  1Y1V K;  4BY7 C;  3GTO K;  3S16 K;  4A3C K;  4MQ9 A;  2A69 A;  4C3I C;  4A3F C;  1TWH C;  4OIR A;  2NVT K;  3GTQ K;  4A3K K;  4Q5S A;  1TWC C;  1K83 K;  4BBR K;  5IYC C;  1I6H C;  5C3E C;  1TWG C;  3RZO C;  3S1M C;  4MEX A;  2B63 C;  4OIP A;  2O5I A;  2JA6 C;  3HOW C;  4A3B K;  3S14 C;  3I4N C;  1I6H K;  4XSX A;  4BY1 C;  5IP9 K;  3H3V L;  3GTM C;  3S1M K;  1YNJ A;  3I4M C;  3K7A K;  1R9T C;  1Y1W K;  2NVQ C;  4A3B C;  4A3D K;  3I4N K;  4C3J C;  3S1Q K;  2NVX C;  5D4D A;  5IYB K;  3S1R K;  4G7O A;  3HOZ C;  2R92 C;  2JA5 C;  3GTM K;  2JA8 C;  2R93 K;  5C4X K;  2JA7 K;  2A68 A;  3K7A C;  1R9T K;  3GTG K;  3HOV C;  2WB1 L;  5M5W K;  1Y1W C;  2NVQ K;  4A3L K;  1I50 C;  4A3M C;  4YFX A;  1HQM A;  3S1Q C;  4C3J K;  3PO3 K;  5M3F K;  5IYD K;  4A3E K;  2PPB A;  3PO2 K;  3S2D C;  2JA5 K;  3H0G K;  3S1N C;  4MEY A;  2WAQ D;  2JA7 C;  4QIW L;  1SMY A;  4LLG A;  4XLN A;  4QJV A;  3GTP C;  4A3M K;  3PO3 C;  2PMZ L;  4Y52 K;  4Q4Z A;  2E2H K;  3RZD K;  5FLM C;  3S2D K;  4YFN A;  4C3H C;  1TWA C;  2YU9 C;  5C4J K;  5M5Y K;  1IW7 A;  1SFO K;  3GTJ K;  4AYB D;  3WOD A;  4YFK A;  3GTL C;  2R7Z K;  3GTP K;  2WB1 D;  3M3Y C;  1TWF C;  2VUM C;  3GTK C;  1WCM K;  4QJV B;  1Y1V C;  3HOU C;  5C44 K;  3S17 K;  5FLM K;  3S16 C;  4C2M K;  4A3C C;  4A3G C;  5C4J C;  1SFO C;  1I3Q K;  1TWH K;  5FJ8 K;  4BBS K;  1XPP A;  3HOY K;  4A3K C;  4QIW D;  4G7Z A;  2BE5 A;  2WAQ L;  4BBR C;  5IYC K;  1WCM C;  5C44 C;  2VUM K;  5C3E K;  2PA8 D;  4Y7N C;  2PMZ D;  1I6V A;  4LK1 A;  2E2J K;  1I3Q C;  3HKZ D;  3GTQ C;  3HOW K;  1K83 C;  1TWC K;  2NVY K;  1TWG K;  3RZO K;  4AYB L;  2B63 K;  5IP9 C;  2E2J C;  2O5J A;  4Y7N K;  2JA6 K;  3I4M K;  3S14 K;  3DXJ A;  5IP7 C;  3M4O C;  4A3D C;  4A3L C;  2NVY C;  3S1R C;  4BY1 K;  4G7H A;  3S15 K;  2R92 K;  3EQL A;  1YNN A;  5C4X C;  4OIO A;  2CW0 A;  4KN4 A;  3HOV K;  2PA8 L;  3S2H K;  5IP7 K;  3M4O K;  2NVX K;  1I50 K;  2A6H A;  5IYB C;  3FKI K;  4KMU A;  3HKZ L;  3HOZ K;  4YG2 A;  4ZH4 A;  4A93 C;  3S15 C;  2Y0S L;  2JA8 K;  3PO2 C;  2R93 C;  4OIN A;  5M3M K;  3GTG C;  3S1N K;  4KN7 A;  4NOI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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