3S4FA

Crystal structure of the complex of bovine lactoperoxidase with 1h-pyrazolo[4,3-c] pyridine at 1.99 a resolution
Total Genus 191
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
191
sequence length
595
structure length
594
Chain Sequence
SWEVGCGAPVPLVKCDENSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQRKTRNGFRVPLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPETELGSNEHSKTQCEEYCIQGDNCFPIMFPKNDPKLKTQGKCMPFFRAGFVCPTPPYQSLAREQINAVTSFLDASLVYGSEPLASRLRNLSSPLGLMAVNQEAWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSEMQKWIPPYQGYNNSVDPRISNVFTFAFRFGHMEVPSTVSRLDENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENPGVFTEKQRDSLQKVSFSRLICDNTHITKVPLHAFQANNYPHDFVDCSTVDKLDLSPWASREN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords Lactoperoxidase
publication title Crystal structure of the complex of bovine lactoperoxidase with 1H-pyrazolo[4,3-c] pyridine at 1.99 A resolution
rcsb
total genus 191
structure length 594
sequence length 595
ec nomenclature ec 1.11.1.7: Peroxidase.
pdb deposition date 2011-05-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03098 An_peroxidase Animal haem peroxidase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.640.10 Mainly Alpha Orthogonal Bundle Myeloperoxidase, subunit C Haem peroxidase domain superfamily, animal type 3s4fA00
4RRYA 1U67A 3S4FA 3QH0A 3QF1A 3UBAA 2NQXA 1CX2A 1DIYA 4MSFA 2R5LA 5IKRA 4KVLA 3OGWA 3HS7A 4DL1C 1EQHA 2QQTA 5F1AA 1CVUA 3F9PC 4E1GA 2GJMA 2IPSA 1HT8A 3N8XA 3KRKA 3NT1A 1D5LC 3OLUA 1PRHA 3GC1A 3TGYA 3V6QA 1MYPC 4PH9A 3R4XA 4QYQA 5JVZA 1DNWC 4QJQA 1FE2A 3RR3A 3N8YB 3OLTA 2OJVA 5FDQA 1D2VC 4RUTA 2PT3A 5IKTA 3RKEA 1MHLC 5IKQA 3GCJA 3N8FA 4HHSA 4OEKA 3PGHA 3R5QA 1CQEA 2QRBA 3I6NA 3NTBA 4KVKA 4N7AA 4NJBA 1PTHA 3N8VA 3GCLA 3BXIA 1HT5A 3FNLA 5FF1A 3ERHA 2OYEP 3QMOA 1DDXA 3ZS0C 1D7WC 1EQGA 4Y55A 3LN0A 5F19A 5COXA 1IGXA 3NYHA 2PUMA 4C1MC 3LN1A 4M10A 3NIUA 3N8WA 3N8ZA 2E9EA 3FAQA 3MQEA 3HS6A 3TZIA 4RRWA 2EFBA 4IG5A 2IKCA 5GLSA 1PXXA 3KK6A 3N8WB 4LJJA 4OTJA 3SXVA 1CXPC 2AYLA 3R5OA 3Q9KA 3R55A 5IKVA 6COXA 4HHRA 3PY4A 4GN6A 3NAKA 3GCKA 4KSZA 2QPKA 1EBVA 5JVYA 4KVJA 3QL6A 4RS0A 2EHAA 4NT3A 3HS5A 4FM5A 3MDLA 2Z5ZA 4RRXA 5GH0A 1PGEA 3KRQA 3ERIA 1DNUC 3ZS1C 4RRZA 4OTYA 4O1ZA 4M11A 1IGZA 5HPWA 5JW1A 4Z0LA 3Q7DA 4PNXA 5B72A 5KIRA 2O86A 3N8YA 3NTGA 4GM7A 5FIWC 4COXA 1Q4GA 2OYUP
chains in the Genus database with same CATH superfamily
4RRYA 1U67A 3S4FA 3QH0A 3QF1A 3UBAA 2NQXA 1CX2A 1DIYA 4MSFA 2R5LA 5IKRA 4KVLA 3OGWA 3HS7A 4DL1C 1EQHA 2QQTA 5F1AA 1CVUA 3F9PC 4E1GA 2GJMA 2IPSA 1HT8A 3N8XA 3KRKA 3NT1A 1D5LC 3OLUA 1PRHA 3GC1A 3TGYA 3V6QA 1MYPC 4PH9A 3R4XA 4QYQA 5JVZA 1DNWC 4QJQA 1FE2A 3RR3A 3N8YB 3OLTA 2OJVA 5FDQA 1D2VC 4RUTA 2PT3A 5IKTA 3RKEA 1MHLC 5IKQA 3GCJA 3N8FA 4HHSA 4OEKA 3PGHA 3R5QA 1CQEA 2QRBA 3I6NA 3NTBA 4KVKA 4N7AA 4NJBA 1PTHA 3N8VA 3GCLA 3BXIA 1HT5A 3FNLA 5FF1A 3ERHA 2OYEP 3QMOA 1DDXA 3ZS0C 1D7WC 1EQGA 4Y55A 3LN0A 5F19A 5COXA 1IGXA 3NYHA 2PUMA 4C1MC 3LN1A 4M10A 3NIUA 3N8WA 3N8ZA 2E9EA 3FAQA 3MQEA 3HS6A 3TZIA 4RRWA 2EFBA 4IG5A 2IKCA 5GLSA 1PXXA 3KK6A 3N8WB 4LJJA 4OTJA 3SXVA 1CXPC 2AYLA 3R5OA 3Q9KA 3R55A 5IKVA 6COXA 4HHRA 3PY4A 4GN6A 3NAKA 3GCKA 4KSZA 2QPKA 1EBVA 5JVYA 4KVJA 3QL6A 4RS0A 2EHAA 4NT3A 3HS5A 4FM5A 3MDLA 2Z5ZA 4RRXA 5GH0A 1PGEA 3KRQA 3ERIA 1DNUC 3ZS1C 4RRZA 4OTYA 4O1ZA 4M11A 1IGZA 5HPWA 5JW1A 4Z0LA 3Q7DA 4PNXA 5B72A 5KIRA 2O86A 3N8YA 3NTGA 4GM7A 5FIWC 4COXA 1Q4GA 2OYUP
chains in the Genus database with same CATH topology
4RRYA 1U67A 3S4FA 3QH0A 3QF1A 3UBAA 2NQXA 1CX2A 1DIYA 4MSFA 2R5LA 5IKRA 4KVLA 3OGWA 3HS7A 4DL1C 1EQHA 2QQTA 5F1AA 1CVUA 3F9PC 4E1GA 2GJMA 2IPSA 1HT8A 3N8XA 3KRKA 3NT1A 1D5LC 3OLUA 1PRHA 3GC1A 3TGYA 3V6QA 1MYPC 4PH9A 3R4XA 4QYQA 5JVZA 1DNWC 4QJQA 1FE2A 3RR3A 3N8YB 3OLTA 2OJVA 5FDQA 1D2VC 4RUTA 2PT3A 5IKTA 3RKEA 1MHLC 5IKQA 3GCJA 3N8FA 4HHSA 4OEKA 3PGHA 3R5QA 1CQEA 2QRBA 3I6NA 3NTBA 4KVKA 4N7AA 4NJBA 1PTHA 3N8VA 3GCLA 3BXIA 1HT5A 3FNLA 5FF1A 3ERHA 2OYEP 3QMOA 1DDXA 3ZS0C 1D7WC 1EQGA 4Y55A 3LN0A 5F19A 5COXA 1IGXA 3NYHA 2PUMA 4C1MC 3LN1A 4M10A 3NIUA 3N8WA 3N8ZA 2E9EA 3FAQA 3MQEA 3HS6A 3TZIA 4RRWA 2EFBA 4IG5A 2IKCA 5GLSA 1PXXA 3KK6A 3N8WB 4LJJA 4OTJA 3SXVA 1CXPC 2AYLA 3R5OA 3Q9KA 3R55A 5IKVA 6COXA 4HHRA 3PY4A 4GN6A 3NAKA 3GCKA 4KSZA 2QPKA 1EBVA 5JVYA 4KVJA 3QL6A 4RS0A 2EHAA 4NT3A 3HS5A 4FM5A 3MDLA 2Z5ZA 4RRXA 5GH0A 1PGEA 3KRQA 3ERIA 1DNUC 3ZS1C 4RRZA 4OTYA 4O1ZA 4M11A 1IGZA 5HPWA 5JW1A 4Z0LA 3Q7DA 4PNXA 5B72A 5KIRA 2O86A 3N8YA 3NTGA 4GM7A 5FIWC 4COXA 1Q4GA 2OYUP
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4RRY A;  1U67 A;  3S4F A;  3QH0 A;  3QF1 A;  3UBA A;  2NQX A;  1CX2 A;  1DIY A;  4MSF A;  2R5L A;  5IKR A;  4KVL A;  3OGW A;  3HS7 A;  4DL1 C;  1EQH A;  2QQT A;  5F1A A;  1CVU A;  3F9P C;  4E1G A;  2GJM A;  2IPS A;  1HT8 A;  3N8X A;  3KRK A;  3NT1 A;  1D5L C;  3OLU A;  1PRH A;  3GC1 A;  3TGY A;  3V6Q A;  1MYP C;  4PH9 A;  3R4X A;  4QYQ A;  5JVZ A;  1DNW C;  4QJQ A;  1FE2 A;  3RR3 A;  3N8Y B;  3OLT A;  2OJV A;  5FDQ A;  1D2V C;  4RUT A;  2PT3 A;  5IKT A;  3RKE A;  1MHL C;  5IKQ A;  3GCJ A;  3N8F A;  4HHS A;  4OEK A;  3PGH A;  3R5Q A;  1CQE A;  2QRB A;  3I6N A;  3NTB A;  4KVK A;  4N7A A;  4NJB A;  1PTH A;  3N8V A;  3GCL A;  3BXI A;  1HT5 A;  3FNL A;  5FF1 A;  3ERH A;  2OYE P;  3QMO A;  1DDX A;  3ZS0 C;  1D7W C;  1EQG A;  4Y55 A;  3LN0 A;  5F19 A;  5COX A;  1IGX A;  3NYH A;  2PUM A;  4C1M C;  3LN1 A;  4M10 A;  3NIU A;  3N8W A;  3N8Z A;  2E9E A;  3FAQ A;  3MQE A;  3HS6 A;  3TZI A;  4RRW A;  2EFB A;  4IG5 A;  2IKC A;  5GLS A;  1PXX A;  3KK6 A;  3N8W B;  4LJJ A;  4OTJ A;  3SXV A;  1CXP C;  2AYL A;  3R5O A;  3Q9K A;  3R55 A;  5IKV A;  6COX A;  4HHR A;  3PY4 A;  4GN6 A;  3NAK A;  3GCK A;  4KSZ A;  2QPK A;  1EBV A;  5JVY A;  4KVJ A;  3QL6 A;  4RS0 A;  2EHA A;  4NT3 A;  3HS5 A;  4FM5 A;  3MDL A;  2Z5Z A;  4RRX A;  5GH0 A;  1PGE A;  3KRQ A;  3ERI A;  1DNU C;  3ZS1 C;  4RRZ A;  4OTY A;  4O1Z A;  4M11 A;  1IGZ A;  5HPW A;  5JW1 A;  4Z0L A;  3Q7D A;  4PNX A;  5B72 A;  5KIR A;  2O86 A;  3N8Y A;  3NTG A;  4GM7 A;  5FIW C;  4COX A;  1Q4G A;  2OYU P; 
#chains in the Genus database with same CATH topology
 4RRY A;  1U67 A;  3S4F A;  3QH0 A;  3QF1 A;  3UBA A;  2NQX A;  1CX2 A;  1DIY A;  4MSF A;  2R5L A;  5IKR A;  4KVL A;  3OGW A;  3HS7 A;  4DL1 C;  1EQH A;  2QQT A;  5F1A A;  1CVU A;  3F9P C;  4E1G A;  2GJM A;  2IPS A;  1HT8 A;  3N8X A;  3KRK A;  3NT1 A;  1D5L C;  3OLU A;  1PRH A;  3GC1 A;  3TGY A;  3V6Q A;  1MYP C;  4PH9 A;  3R4X A;  4QYQ A;  5JVZ A;  1DNW C;  4QJQ A;  1FE2 A;  3RR3 A;  3N8Y B;  3OLT A;  2OJV A;  5FDQ A;  1D2V C;  4RUT A;  2PT3 A;  5IKT A;  3RKE A;  1MHL C;  5IKQ A;  3GCJ A;  3N8F A;  4HHS A;  4OEK A;  3PGH A;  3R5Q A;  1CQE A;  2QRB A;  3I6N A;  3NTB A;  4KVK A;  4N7A A;  4NJB A;  1PTH A;  3N8V A;  3GCL A;  3BXI A;  1HT5 A;  3FNL A;  5FF1 A;  3ERH A;  2OYE P;  3QMO A;  1DDX A;  3ZS0 C;  1D7W C;  1EQG A;  4Y55 A;  3LN0 A;  5F19 A;  5COX A;  1IGX A;  3NYH A;  2PUM A;  4C1M C;  3LN1 A;  4M10 A;  3NIU A;  3N8W A;  3N8Z A;  2E9E A;  3FAQ A;  3MQE A;  3HS6 A;  3TZI A;  4RRW A;  2EFB A;  4IG5 A;  2IKC A;  5GLS A;  1PXX A;  3KK6 A;  3N8W B;  4LJJ A;  4OTJ A;  3SXV A;  1CXP C;  2AYL A;  3R5O A;  3Q9K A;  3R55 A;  5IKV A;  6COX A;  4HHR A;  3PY4 A;  4GN6 A;  3NAK A;  3GCK A;  4KSZ A;  2QPK A;  1EBV A;  5JVY A;  4KVJ A;  3QL6 A;  4RS0 A;  2EHA A;  4NT3 A;  3HS5 A;  4FM5 A;  3MDL A;  2Z5Z A;  4RRX A;  5GH0 A;  1PGE A;  3KRQ A;  3ERI A;  1DNU C;  3ZS1 C;  4RRZ A;  4OTY A;  4O1Z A;  4M11 A;  1IGZ A;  5HPW A;  5JW1 A;  4Z0L A;  3Q7D A;  4PNX A;  5B72 A;  5KIR A;  2O86 A;  3N8Y A;  3NTG A;  4GM7 A;  5FIW C;  4COX A;  1Q4G A;  2OYU P; 
#chains in the Genus database with same CATH homology
 4RRY A;  1U67 A;  3S4F A;  3QH0 A;  3QF1 A;  3UBA A;  2NQX A;  1CX2 A;  1DIY A;  4MSF A;  2R5L A;  5IKR A;  4KVL A;  3OGW A;  3HS7 A;  4DL1 C;  1EQH A;  2QQT A;  5F1A A;  1CVU A;  3F9P C;  4E1G A;  2GJM A;  2IPS A;  1HT8 A;  3N8X A;  3KRK A;  3NT1 A;  1D5L C;  3OLU A;  1PRH A;  3GC1 A;  3TGY A;  3V6Q A;  1MYP C;  4PH9 A;  3R4X A;  4QYQ A;  5JVZ A;  1DNW C;  4QJQ A;  1FE2 A;  3RR3 A;  3N8Y B;  3OLT A;  2OJV A;  5FDQ A;  1D2V C;  4RUT A;  2PT3 A;  5IKT A;  3RKE A;  1MHL C;  5IKQ A;  3GCJ A;  3N8F A;  4HHS A;  4OEK A;  3PGH A;  3R5Q A;  1CQE A;  2QRB A;  3I6N A;  3NTB A;  4KVK A;  4N7A A;  4NJB A;  1PTH A;  3N8V A;  3GCL A;  3BXI A;  1HT5 A;  3FNL A;  5FF1 A;  3ERH A;  2OYE P;  3QMO A;  1DDX A;  3ZS0 C;  1D7W C;  1EQG A;  4Y55 A;  3LN0 A;  5F19 A;  5COX A;  1IGX A;  3NYH A;  2PUM A;  4C1M C;  3LN1 A;  4M10 A;  3NIU A;  3N8W A;  3N8Z A;  2E9E A;  3FAQ A;  3MQE A;  3HS6 A;  3TZI A;  4RRW A;  2EFB A;  4IG5 A;  2IKC A;  5GLS A;  1PXX A;  3KK6 A;  3N8W B;  4LJJ A;  4OTJ A;  3SXV A;  1CXP C;  2AYL A;  3R5O A;  3Q9K A;  3R55 A;  5IKV A;  6COX A;  4HHR A;  3PY4 A;  4GN6 A;  3NAK A;  3GCK A;  4KSZ A;  2QPK A;  1EBV A;  5JVY A;  4KVJ A;  3QL6 A;  4RS0 A;  2EHA A;  4NT3 A;  3HS5 A;  4FM5 A;  3MDL A;  2Z5Z A;  4RRX A;  5GH0 A;  1PGE A;  3KRQ A;  3ERI A;  1DNU C;  3ZS1 C;  4RRZ A;  4OTY A;  4O1Z A;  4M11 A;  1IGZ A;  5HPW A;  5JW1 A;  4Z0L A;  3Q7D A;  4PNX A;  5B72 A;  5KIR A;  2O86 A;  3N8Y A;  3NTG A;  4GM7 A;  5FIW C;  4COX A;  1Q4G A;  2OYU P; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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