3SGQI

Gln 18 variant of turkey ovomucoid inhibitor third domain complexed with streptomyces griseus proteinase b at ph 10.7
Total Genus 13
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
51
structure length
51
Chain Sequence
VDCSEYPKPACTQEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Streptogrisin B
publication title Recruitment of a Buried K+ Ion to Stabilize the Negative Charge of Ionized P1 in the Hydrophobic Pocket: Crystal Structures of Glu18, Gln18, Asp18 and Asn18 Variants of Turkey Ovomucoid Inhibitor Third Domain Complexed with Streptomyces griseus Protease B at Various pH's
rcsb
source organism Meleagris gallopavo
total genus 13
structure length 51
sequence length 51
ec nomenclature
pdb deposition date 1999-03-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 3sgqI00
2NU3I 3B4VC 1M8CA 4OVOA 1TURA 3QTLD 1DS2I 1YU6C 2QQDA 5JHWC 2JXDA 3SEKC 3TJQA 2JZMA 4HGUA 2M5XA 1M8BA 1BUSA 1LR8A 1CT2I 1CT4I 1TGSI 1SGDI 4SGBI 2NU4I 2P6AC 2SGDI 2ARPF 3SGBI 1KMAA 1SGYI 2OVOA 1TUSA 2KMOA 1Y1CA 1UVGA 2XRCA 2N52A 2BUSA 1SGNI 2SGQI 1CT0I 1IW4A 1UUCA 2ERWA 1CHOI 3HH2C 1H0ZA 1TIHA 1PCEA 1R0RI 2N17A 1NUBA 2JYYA 1PJUA 2KCXA 2SGPI 1DS3I 3SGQI 2N71A 2KMPA 1OVOA 1IY6A 5DAEA 1LR9A 2F3CI 1SGPI 2GKVA 1HPTA 1TBRR 1SGQI 1Y1BA 1IY5A 1Z7KB 1CGJI 2KMRA 1CSOI 2NU0I 1SGRI 1CGII 2B0UC 2QQCA 1OYVI 1UVFA 1BMOA 1HDLA 2SGFI 2GKRI 2KMQA 2GKTI 1TBQR 1HJAI 2NU1I 1OMTA 1N13A 1FYBA 2SGEI 2WCYA 1SGEI 2NU2I 2LEOA 1AN1I 1YTPA 2V53A 1OMUA 1CE3A 1MT1A 1LR7A 4GI3C 3OVOA 1PPFI
chains in the Genus database with same CATH superfamily
3OXFA 2CJSC 2NU3I 1W3SA 3B4VC 5CCMA 1M8CA 4OVOA 1TURA 2QPOA 3PDNA 3QTLD 1DS2I 2N1AB 4WP4A 1YU6C 2YUUA 2QQDA 2A20A 3R5DA 1X74A 5JHWC 2JXDA 2UVOA 2DKVA 1X4SA 3SEKC 4E1RA 3VDPA 2OZUA 3TJQA 2OD1A 2JZMA 5FUVA 3VDUA 4HGUA 2M5XA 3E2IA 1M8BA 1BUSA 4L9MA 2L8EA 1LR8A 1TBNA 1CT2I 1CT4I 3QWPA 2ODDA 3UGLA 3FSYA 4FKDA 5FUWA 1TGSI 1SGDI 4SGBI 2NU4I 2YQPA 2JW6A 2P6AC 2GIVA 2SGDI 3E59A 3TO7A 3UEYA 1U5KA 1WKXA 1XA6A 1K7TA 2ARPF 2K9HA 3SGBI 3UOEA 1KMAA 1SGYI 3R5AA 1MJAA 2OVOA 3UFFA 1TUSA 2E73A 3CXLA 2KMOA 3OL0A 2B8TA 1MJ9A 1K7VA 1Y1CA 5EX0A 1PTQA 1FY7A 2Y0MA 1HEVA 1UVGA 2XRCA 2RIJA 4UXJA 1R79A 4E1PA 3UGIA 1V1IA 3MEKA 2N52A 1MJBA 7WGAA 2BUSA 3OXLA 5E3QA 1P9GA 1SGNI 2ORWA 1CT0I 2SGQI 3UGDA 2J87A 1IW4A 2X3TA 3FSXA 1TBOA 1UUCA 2ROWA 2ERWA 1CHOI 5J8FA 3HH2C 1FAQA 1Q9BA 3UEJA 2E5RA 2OU2A 5EX3A 1H0ZA 5CCLA 1TIHA 3GOXA 3RU0A 2V1CA 5FUYA 1PCEA 2VRWB 1R0RI 5HQ8A 2ENZA 2N17A 5HI7A 1NUBA 2JYYA 1PJUA 2DB6A 2CWFA 1WGTA 1KBEA 2KCXA 3D00A 2SGPI 3KY9A 2DIPA 1Y8FA 2ELIA 1DS3I 3SGQI 2CWGA 2WGCA 2N71A 1K7UA 1UHAA 2ORVA 3QAHA 1XX6A 3R5CA 2KMPA 1OVOA 2UZ3A 1IY6A 5DAEA 1NXUA 2LUYA 1LR9A 2F3CI 1P9ZA 2LB7A 1SGPI 2GKVA 9WGAA 2QQEA 5E3RA 4UXIA 2CWHA 1HPTA 2FNFX 2X52A 5FUXA 1TBRR 1SGQI 1Y1BA 4UXHA 1W4RA 1S20A 4AMLA 1Z7KB 3TOBA 1CGJI 2KMRA 1IY5A 1Z2IA 1TOTA 1ULKA 1CSOI 4A24A 2V1CC 2NU0I 1SGRI 2GVIA 2RC4A 1CGII 3TOAA 3R5BA 2B0UC 2ENNA 2J9RA 2QQCA 1OYVI 1UVFA 1BMOA 1V1HA 1HDLA 2SGFI 1VDDA 2GKRI 1KBFA 3TO9A 1XBTA 1RFHA 1ULMA 2KMQA 2GKTI 5J8CA 3OXGA 1TBQR 4JCVE 1HJAI 2NU1I 2QQ0A 1OMTA 1N13A 3BJIA 2SGEI 3FC3A 1ULNA 1FYBA 2WCYA 1SGEI 2NU2I 2LEOA 2W0TA 4DNCA 3TO6A 4MPIA 1AN1I 2WVJA 1YTPA 2V53A 4B6DA 1PTRA 1OMUA 1WGCA 3VE5A 1CE3A 1FARA 1MT1A 2L7XA 2JA1A 1LR7A 1WTJA 3OVOA 4GI3C 2PQ8A 1PPFI 5E3PA
chains in the Genus database with same CATH topology
3OXFA 2CJSC 2NU3I 1W3SA 3B4VC 5CCMA 1M8CA 4OVOA 1TURA 2QPOA 3PDNA 3QTLD 1DS2I 2N1AB 1YU6C 2YUUA 2QQDA 2A20A 1X74A 5JHWC 2JXDA 1X4SA 3SEKC 4E1RA 3VDPA 3TJQA 2OD1A 2JZMA 5FUVA 3VDUA 4HGUA 2M5XA 3E2IA 1M8BA 1BUSA 4L9MA 2L8EA 1LR8A 1TBNA 1CT2I 1CT4I 3QWPA 2ODDA 3UGLA 4FKDA 5FUWA 1TGSI 1SGDI 4SGBI 2NU4I 2YQPA 2JW6A 2P6AC 2SGDI 3E59A 3UEYA 1U5KA 1XA6A 2ARPF 2K9HA 3SGBI 1KMAA 1SGYI 3UFFA 2OVOA 1TUSA 2E73A 3CXLA 2KMOA 3OL0A 2B8TA 1Y1CA 5EX0A 1PTQA 1UVGA 2XRCA 4UXJA 4E1PA 1R79A 3UGIA 1V1IA 3MEKA 2N52A 2BUSA 3OXLA 1SGNI 2ORWA 2SGQI 1CT0I 3UGDA 2J87A 1IW4A 1TBOA 1UUCA 2ROWA 2ERWA 1CHOI 3HH2C 1FAQA 3UEJA 2E5RA 5EX3A 1H0ZA 5CCLA 1TIHA 3GOXA 3RU0A 2V1CA 5FUYA 1PCEA 2VRWB 1R0RI 5HQ8A 2ENZA 2N17A 5HI7A 1NUBA 2JYYA 1PJUA 2DB6A 1KBEA 2KCXA 3D00A 2SGPI 3KY9A 2DIPA 1Y8FA 2ELIA 1DS3I 3SGQI 2N71A 2ORVA 1XX6A 2KMPA 1OVOA 2UZ3A 1IY6A 5DAEA 2LUYA 1LR9A 2F3CI 1SGPI 2GKVA 2QQEA 4UXIA 1HPTA 2FNFX 5FUXA 1TBRR 1SGQI 1Y1BA 4UXHA 1W4RA 1IY5A 1Z7KB 1CGJI 2KMRA 1TOTA 1CSOI 4A24A 2V1CC 2NU0I 1SGRI 2GVIA 1CGII 2B0UC 2ENNA 2J9RA 2QQCA 1OYVI 1UVFA 1BMOA 1V1HA 1HDLA 2SGFI 1VDDA 2GKRI 1KBFA 1XBTA 1RFHA 2KMQA 2GKTI 3OXGA 1TBQR 4JCVE 1HJAI 2NU1I 2QQ0A 1OMTA 1N13A 3BJIA 2SGEI 3FC3A 1FYBA 2WCYA 1SGEI 2NU2I 2LEOA 2W0TA 1AN1I 2WVJA 1YTPA 2V53A 4B6DA 1PTRA 1OMUA 3VE5A 1CE3A 1FARA 1MT1A 2L7XA 2JA1A 1LR7A 4GI3C 3OVOA 1PPFI
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2NU3 I;  3B4V C;  1M8C A;  4OVO A;  1TUR A;  3QTL D;  1DS2 I;  1YU6 C;  2QQD A;  5JHW C;  2JXD A;  3SEK C;  3TJQ A;  2JZM A;  4HGU A;  2M5X A;  1M8B A;  1BUS A;  1LR8 A;  1CT2 I;  1CT4 I;  1TGS I;  1SGD I;  4SGB I;  2NU4 I;  2P6A C;  2SGD I;  2ARP F;  3SGB I;  1KMA A;  1SGY I;  2OVO A;  1TUS A;  2KMO A;  1Y1C A;  1UVG A;  2XRC A;  2N52 A;  2BUS A;  1SGN I;  2SGQ I;  1CT0 I;  1IW4 A;  1UUC A;  2ERW A;  1CHO I;  3HH2 C;  1H0Z A;  1TIH A;  1PCE A;  1R0R I;  2N17 A;  1NUB A;  2JYY A;  1PJU A;  2KCX A;  2SGP I;  1DS3 I;  3SGQ I;  2N71 A;  2KMP A;  1OVO A;  1IY6 A;  5DAE A;  1LR9 A;  2F3C I;  1SGP I;  2GKV A;  1HPT A;  1TBR R;  1SGQ I;  1Y1B A;  1IY5 A;  1Z7K B;  1CGJ I;  2KMR A;  1CSO I;  2NU0 I;  1SGR I;  1CGI I;  2B0U C;  2QQC A;  1OYV I;  1UVF A;  1BMO A;  1HDL A;  2SGF I;  2GKR I;  2KMQ A;  2GKT I;  1TBQ R;  1HJA I;  2NU1 I;  1OMT A;  1N13 A;  1FYB A;  2SGE I;  2WCY A;  1SGE I;  2NU2 I;  2LEO A;  1AN1 I;  1YTP A;  2V53 A;  1OMU A;  1CE3 A;  1MT1 A;  1LR7 A;  4GI3 C;  3OVO A;  1PPF I; 
#chains in the Genus database with same CATH topology
 3OXF A;  2CJS C;  2NU3 I;  1W3S A;  3B4V C;  5CCM A;  1M8C A;  4OVO A;  1TUR A;  2QPO A;  3PDN A;  3QTL D;  1DS2 I;  2N1A B;  4WP4 A;  1YU6 C;  2YUU A;  2QQD A;  2A20 A;  3R5D A;  1X74 A;  5JHW C;  2JXD A;  2UVO A;  2DKV A;  1X4S A;  3SEK C;  4E1R A;  3VDP A;  2OZU A;  3TJQ A;  2OD1 A;  2JZM A;  5FUV A;  3VDU A;  4HGU A;  2M5X A;  3E2I A;  1M8B A;  1BUS A;  4L9M A;  2L8E A;  1LR8 A;  1TBN A;  1CT2 I;  1CT4 I;  3QWP A;  2ODD A;  3UGL A;  3FSY A;  4FKD A;  5FUW A;  1TGS I;  1SGD I;  4SGB I;  2NU4 I;  2YQP A;  2JW6 A;  2P6A C;  2GIV A;  2SGD I;  3E59 A;  3TO7 A;  3UEY A;  1U5K A;  1WKX A;  1XA6 A;  1K7T A;  2ARP F;  2K9H A;  3SGB I;  3UOE A;  1KMA A;  1SGY I;  3R5A A;  1MJA A;  2OVO A;  3UFF A;  1TUS A;  2E73 A;  3CXL A;  2KMO A;  3OL0 A;  2B8T A;  1MJ9 A;  1K7V A;  1Y1C A;  5EX0 A;  1PTQ A;  1FY7 A;  2Y0M A;  1HEV A;  1UVG A;  2XRC A;  2RIJ A;  4UXJ A;  1R79 A;  4E1P A;  3UGI A;  1V1I A;  3MEK A;  2N52 A;  1MJB A;  7WGA A;  2BUS A;  3OXL A;  5E3Q A;  1P9G A;  1SGN I;  2ORW A;  1CT0 I;  2SGQ I;  3UGD A;  2J87 A;  1IW4 A;  2X3T A;  3FSX A;  1TBO A;  1UUC A;  2ROW A;  2ERW A;  1CHO I;  5J8F A;  3HH2 C;  1FAQ A;  1Q9B A;  3UEJ A;  2E5R A;  2OU2 A;  5EX3 A;  1H0Z A;  5CCL A;  1TIH A;  3GOX A;  3RU0 A;  2V1C A;  5FUY A;  1PCE A;  2VRW B;  1R0R I;  5HQ8 A;  2ENZ A;  2N17 A;  5HI7 A;  1NUB A;  2JYY A;  1PJU A;  2DB6 A;  2CWF A;  1WGT A;  1KBE A;  2KCX A;  3D00 A;  2SGP I;  3KY9 A;  2DIP A;  1Y8F A;  2ELI A;  1DS3 I;  3SGQ I;  2CWG A;  2WGC A;  2N71 A;  1K7U A;  1UHA A;  2ORV A;  3QAH A;  1XX6 A;  3R5C A;  2KMP A;  1OVO A;  2UZ3 A;  1IY6 A;  5DAE A;  1NXU A;  2LUY A;  1LR9 A;  2F3C I;  1P9Z A;  2LB7 A;  1SGP I;  2GKV A;  9WGA A;  2QQE A;  5E3R A;  4UXI A;  2CWH A;  1HPT A;  2FNF X;  2X52 A;  5FUX A;  1TBR R;  1SGQ I;  1Y1B A;  4UXH A;  1W4R A;  1S20 A;  4AML A;  1Z7K B;  3TOB A;  1CGJ I;  2KMR A;  1IY5 A;  1Z2I A;  1TOT A;  1ULK A;  1CSO I;  4A24 A;  2V1C C;  2NU0 I;  1SGR I;  2GVI A;  2RC4 A;  1CGI I;  3TOA A;  3R5B A;  2B0U C;  2ENN A;  2J9R A;  2QQC A;  1OYV I;  1UVF A;  1BMO A;  1V1H A;  1HDL A;  2SGF I;  1VDD A;  2GKR I;  1KBF A;  3TO9 A;  1XBT A;  1RFH A;  1ULM A;  2KMQ A;  2GKT I;  5J8C A;  3OXG A;  1TBQ R;  4JCV E;  1HJA I;  2NU1 I;  2QQ0 A;  1OMT A;  1N13 A;  3BJI A;  2SGE I;  3FC3 A;  1ULN A;  1FYB A;  2WCY A;  1SGE I;  2NU2 I;  2LEO A;  2W0T A;  4DNC A;  3TO6 A;  4MPI A;  1AN1 I;  2WVJ A;  1YTP A;  2V53 A;  4B6D A;  1PTR A;  1OMU A;  1WGC A;  3VE5 A;  1CE3 A;  1FAR A;  1MT1 A;  2L7X A;  2JA1 A;  1LR7 A;  1WTJ A;  3OVO A;  4GI3 C;  2PQ8 A;  1PPF I;  5E3P A; 
#chains in the Genus database with same CATH homology
 3OXF A;  2CJS C;  2NU3 I;  1W3S A;  3B4V C;  5CCM A;  1M8C A;  4OVO A;  1TUR A;  2QPO A;  3PDN A;  3QTL D;  1DS2 I;  2N1A B;  1YU6 C;  2YUU A;  2QQD A;  2A20 A;  1X74 A;  5JHW C;  2JXD A;  1X4S A;  3SEK C;  4E1R A;  3VDP A;  3TJQ A;  2OD1 A;  2JZM A;  5FUV A;  3VDU A;  4HGU A;  2M5X A;  3E2I A;  1M8B A;  1BUS A;  4L9M A;  2L8E A;  1LR8 A;  1TBN A;  1CT2 I;  1CT4 I;  3QWP A;  2ODD A;  3UGL A;  4FKD A;  5FUW A;  1TGS I;  1SGD I;  4SGB I;  2NU4 I;  2YQP A;  2JW6 A;  2P6A C;  2SGD I;  3E59 A;  3UEY A;  1U5K A;  1XA6 A;  2ARP F;  2K9H A;  3SGB I;  1KMA A;  1SGY I;  3UFF A;  2OVO A;  1TUS A;  2E73 A;  3CXL A;  2KMO A;  3OL0 A;  2B8T A;  1Y1C A;  5EX0 A;  1PTQ A;  1UVG A;  2XRC A;  4UXJ A;  4E1P A;  1R79 A;  3UGI A;  1V1I A;  3MEK A;  2N52 A;  2BUS A;  3OXL A;  1SGN I;  2ORW A;  2SGQ I;  1CT0 I;  3UGD A;  2J87 A;  1IW4 A;  1TBO A;  1UUC A;  2ROW A;  2ERW A;  1CHO I;  3HH2 C;  1FAQ A;  3UEJ A;  2E5R A;  5EX3 A;  1H0Z A;  5CCL A;  1TIH A;  3GOX A;  3RU0 A;  2V1C A;  5FUY A;  1PCE A;  2VRW B;  1R0R I;  5HQ8 A;  2ENZ A;  2N17 A;  5HI7 A;  1NUB A;  2JYY A;  1PJU A;  2DB6 A;  1KBE A;  2KCX A;  3D00 A;  2SGP I;  3KY9 A;  2DIP A;  1Y8F A;  2ELI A;  1DS3 I;  3SGQ I;  2N71 A;  2ORV A;  1XX6 A;  2KMP A;  1OVO A;  2UZ3 A;  1IY6 A;  5DAE A;  2LUY A;  1LR9 A;  2F3C I;  1SGP I;  2GKV A;  2QQE A;  4UXI A;  1HPT A;  2FNF X;  5FUX A;  1TBR R;  1SGQ I;  1Y1B A;  4UXH A;  1W4R A;  1IY5 A;  1Z7K B;  1CGJ I;  2KMR A;  1TOT A;  1CSO I;  4A24 A;  2V1C C;  2NU0 I;  1SGR I;  2GVI A;  1CGI I;  2B0U C;  2ENN A;  2J9R A;  2QQC A;  1OYV I;  1UVF A;  1BMO A;  1V1H A;  1HDL A;  2SGF I;  1VDD A;  2GKR I;  1KBF A;  1XBT A;  1RFH A;  2KMQ A;  2GKT I;  3OXG A;  1TBQ R;  4JCV E;  1HJA I;  2NU1 I;  2QQ0 A;  1OMT A;  1N13 A;  3BJI A;  2SGE I;  3FC3 A;  1FYB A;  2WCY A;  1SGE I;  2NU2 I;  2LEO A;  2W0T A;  1AN1 I;  2WVJ A;  1YTP A;  2V53 A;  4B6D A;  1PTR A;  1OMU A;  3VE5 A;  1CE3 A;  1FAR A;  1MT1 A;  2L7X A;  2JA1 A;  1LR7 A;  4GI3 C;  3OVO A;  1PPF I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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