3SJ4X

Ppca mutant m58k
Total Genus 13
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
71
structure length
71
Chain Sequence
ADDIVLKAKNGDVKFPHKAHQKAVPDCKKCHEKGPGKIEGFGKEMAHGKGCKGCHEEKKKGPTKCGECHKK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Electron transport
molecule keywords CYTOCHROME C7
publication title Pitfalls in the interpretation of structural changes in mutant proteins from crystal structures.
pubmed doi rcsb
source organism Geobacter sulfurreducens
total genus 13
structure length 71
sequence length 71
ec nomenclature
pdb deposition date 2011-06-20
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.10.10 Alpha Beta Alpha-Beta Complex Cytochrome C3 Cytochrome C3 3sj4X00
2YYWA 3SJ4X 3OUEA 3SELX 1I77A 2CY3A 2E84A 2BQ4A 4HC3A 3CARA 1QN1A 2LZZA 3CAOA 2EWUA 1HH5A 19HCA 1QN0A 2EWIA 1WADA 1A2IA 1GM4A 1L3OA 1OFWA 3SJ0X 1EHJA 1OFYA 3SJ1X 1J0PA 2A3MA 1GYOA 1AQEA 3BXUA 1UP9A 1DUWA 1LM2A 1Z1NX 3OV0A 3OUQA 2Z47A 2MZ9A 2KMYA 2KSUA 1H29A 1GWSA 2CVCA 3H4NA 1F22A 1OS6A 1UPDA 1MDVA 2CDVA 1WR5A 1IT1A 2BPNA 1W7OA 2CTHA 1J0OA 4HBFA 1KWJA 2A3PA 2LDOA 1GMBA 4HDLA 1CZJA 2N91A 1NEWA 2YYXA 4HB6A 2CYMA 3CYRA 2FFNA 1RWJA 4HAJA 2YXCA 3H34A 2EWKA 3H33A 4HB8A
chains in the Genus database with same CATH superfamily
2YYWA 3SJ4X 3OUEA 3SELX 1I77A 2CY3A 2E84A 2BQ4A 4HC3A 3CARA 1QN1A 2LZZA 3CAOA 2EWUA 1HH5A 19HCA 1QN0A 2EWIA 1WADA 1A2IA 1GM4A 1L3OA 1OFWA 3SJ0X 1EHJA 1OFYA 3SJ1X 1J0PA 2A3MA 1GYOA 1AQEA 3BXUA 1UP9A 1DUWA 1LM2A 1Z1NX 3OV0A 3OUQA 2Z47A 2MZ9A 2KMYA 2KSUA 1H29A 1GWSA 2CVCA 3H4NA 1F22A 1OS6A 1UPDA 1MDVA 2CDVA 1WR5A 1IT1A 2BPNA 1W7OA 2CTHA 1J0OA 4HBFA 1KWJA 2A3PA 2LDOA 1GMBA 4HDLA 1CZJA 2N91A 1NEWA 2YYXA 4HB6A 2CYMA 3CYRA 2FFNA 1RWJA 4HAJA 2YXCA 3H34A 2EWKA 3H33A 4HB8A
chains in the Genus database with same CATH topology
2YYWA 3SJ4X 3OUEA 3SELX 1I77A 2CY3A 2E84A 2BQ4A 4HC3A 3CARA 1QN1A 2LZZA 3CAOA 2EWUA 1HH5A 19HCA 1QN0A 2EWIA 1WADA 1A2IA 1GM4A 1L3OA 1OFWA 3SJ0X 1EHJA 1OFYA 3SJ1X 1J0PA 2A3MA 1GYOA 1AQEA 3BXUA 1UP9A 1DUWA 1LM2A 1Z1NX 3OV0A 3OUQA 2Z47A 2MZ9A 2KMYA 2KSUA 1H29A 1GWSA 2CVCA 3H4NA 1F22A 1OS6A 1UPDA 1MDVA 2CDVA 1WR5A 1IT1A 2BPNA 1W7OA 2CTHA 1J0OA 4HBFA 1KWJA 2A3PA 2LDOA 1GMBA 4HDLA 1CZJA 2N91A 1NEWA 2YYXA 4HB6A 2CYMA 3CYRA 2FFNA 1RWJA 4HAJA 2YXCA 3H34A 2EWKA 3H33A 4HB8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2YYW A;  3SJ4 X;  3OUE A;  3SEL X;  1I77 A;  2CY3 A;  2E84 A;  2BQ4 A;  4HC3 A;  3CAR A;  1QN1 A;  2LZZ A;  3CAO A;  2EWU A;  1HH5 A;  19HC A;  1QN0 A;  2EWI A;  1WAD A;  1A2I A;  1GM4 A;  1L3O A;  1OFW A;  3SJ0 X;  1EHJ A;  1OFY A;  3SJ1 X;  1J0P A;  2A3M A;  1GYO A;  1AQE A;  3BXU A;  1UP9 A;  1DUW A;  1LM2 A;  1Z1N X;  3OV0 A;  3OUQ A;  2Z47 A;  2MZ9 A;  2KMY A;  2KSU A;  1H29 A;  1GWS A;  2CVC A;  3H4N A;  1F22 A;  1OS6 A;  1UPD A;  1MDV A;  2CDV A;  1WR5 A;  1IT1 A;  2BPN A;  1W7O A;  2CTH A;  1J0O A;  4HBF A;  1KWJ A;  2A3P A;  2LDO A;  1GMB A;  4HDL A;  1CZJ A;  2N91 A;  1NEW A;  2YYX A;  4HB6 A;  2CYM A;  3CYR A;  2FFN A;  1RWJ A;  4HAJ A;  2YXC A;  3H34 A;  2EWK A;  3H33 A;  4HB8 A; 
#chains in the Genus database with same CATH topology
 2YYW A;  3SJ4 X;  3OUE A;  3SEL X;  1I77 A;  2CY3 A;  2E84 A;  2BQ4 A;  4HC3 A;  3CAR A;  1QN1 A;  2LZZ A;  3CAO A;  2EWU A;  1HH5 A;  19HC A;  1QN0 A;  2EWI A;  1WAD A;  1A2I A;  1GM4 A;  1L3O A;  1OFW A;  3SJ0 X;  1EHJ A;  1OFY A;  3SJ1 X;  1J0P A;  2A3M A;  1GYO A;  1AQE A;  3BXU A;  1UP9 A;  1DUW A;  1LM2 A;  1Z1N X;  3OV0 A;  3OUQ A;  2Z47 A;  2MZ9 A;  2KMY A;  2KSU A;  1H29 A;  1GWS A;  2CVC A;  3H4N A;  1F22 A;  1OS6 A;  1UPD A;  1MDV A;  2CDV A;  1WR5 A;  1IT1 A;  2BPN A;  1W7O A;  2CTH A;  1J0O A;  4HBF A;  1KWJ A;  2A3P A;  2LDO A;  1GMB A;  4HDL A;  1CZJ A;  2N91 A;  1NEW A;  2YYX A;  4HB6 A;  2CYM A;  3CYR A;  2FFN A;  1RWJ A;  4HAJ A;  2YXC A;  3H34 A;  2EWK A;  3H33 A;  4HB8 A; 
#chains in the Genus database with same CATH homology
 2YYW A;  3SJ4 X;  3OUE A;  3SEL X;  1I77 A;  2CY3 A;  2E84 A;  2BQ4 A;  4HC3 A;  3CAR A;  1QN1 A;  2LZZ A;  3CAO A;  2EWU A;  1HH5 A;  19HC A;  1QN0 A;  2EWI A;  1WAD A;  1A2I A;  1GM4 A;  1L3O A;  1OFW A;  3SJ0 X;  1EHJ A;  1OFY A;  3SJ1 X;  1J0P A;  2A3M A;  1GYO A;  1AQE A;  3BXU A;  1UP9 A;  1DUW A;  1LM2 A;  1Z1N X;  3OV0 A;  3OUQ A;  2Z47 A;  2MZ9 A;  2KMY A;  2KSU A;  1H29 A;  1GWS A;  2CVC A;  3H4N A;  1F22 A;  1OS6 A;  1UPD A;  1MDV A;  2CDV A;  1WR5 A;  1IT1 A;  2BPN A;  1W7O A;  2CTH A;  1J0O A;  4HBF A;  1KWJ A;  2A3P A;  2LDO A;  1GMB A;  4HDL A;  1CZJ A;  2N91 A;  1NEW A;  2YYX A;  4HB6 A;  2CYM A;  3CYR A;  2FFN A;  1RWJ A;  4HAJ A;  2YXC A;  3H34 A;  2EWK A;  3H33 A;  4HB8 A; 
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similar chains in the Genus database (?% sequence similarity)
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#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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