3SJTA

Crystal structure of human arginase i in complex with the inhibitor me-abh, resolution 1.60 a, twinned structure
Total Genus 114
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
114
sequence length
313
structure length
313
Chain Sequence
RTIGIIGAPFSKGQPRGGVEEGPTVLRKAGLLEKLKEQECDVKDYGDLPFADIPNDSPFQIVKNPRSVGKASEQLAGKVAEVKKNGRISLVLGGDHSLAIGSISGHARVHPDLGVIWVDAHTDINTPLTTTSGNLHGQPVSFLLKELKGKIPDVPGFSWVTPCISAKDIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLLGRKKRPIHLSFDVDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVNPSLGKTPEEVTRTVNTAVAITLACFGLAREGNHKPIDYL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Arginase-1
publication title Binding of alpha,alpha-Disubstituted Amino Acids to Arginase Suggests New Avenues for Inhibitor Design
pubmed doi rcsb
source organism Homo sapiens
total genus 114
structure length 313
sequence length 313
chains with identical sequence B
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 2011-06-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 3sjtA00
1WOHA 4GSMA 1R1OA 4FCKA 1HQGA 1TBHA 4G3HA 4IXVA 1P8PA 3GMZA 1RLAA 4RHMA 4FCIA 3TF3A 3MFWA 4MYKA 4IE3A 5RLAA 3F80A 3LHLA 2A0MA 4Q41A 3NIOA 2EF4A 3SJTA 3E8ZA 3THEA 4GSZA 2ZAVA 5HJ9A 2RLAA 4CEVA 4RHQA 1HQFA 3THHA 1T4RA 3SL0A 3NIQA 4GSVA 4Q3QA 4Q3TA 1P8QA 2PLLA 3NIPA 4Q3RA 5CEVA 3DJ8A 4RHIA 4DZ4A 1WOGA 4IE2A 4Q3UA 4RHJA 1XFKA 2AEBA 1PQ3A 3RLAA 4HWWA 4IE1A 4IXUA 4HZEA 4IU1A 3M1RA 4GWCA 4IU4A 4Q3SA 3MJLA 1T5GA 1P8MA 2EF5A 2CEVA 1GQ7A 3GN0A 3SKKA 1ZPGA 1T4SA 1WOIA 4MYNA 1P8SA 3MMRA 4MYLA 3CEVA 3KV2A 4GWDA 4Q3RC 1TA1A 4MYFA 3E9BA 4Q3PA 1ZPEA 1P8NA 1P8RA 1T4TA 4Q42A 4RHKA 3MFVA 1GQ6A 4I06A 4IU5A 1TBLA 2PHOA 1CEVA 1WVBA 1TBJA 4ITYA 4MXRA 4Q40A 4HXQA 1HQHA 3E8QA 3THJA 3PZLA 1T4PA 3LP7A 4IU0A 3E6KA 1WVAA 4Q3VA 1T5FA 4RHLA 5HJAA 1D3VA 1HQXA 2PHAA 1HQ5A 4RLAA 3E6VA 3TH7A 1P8OA 2EIVA 3LP4A 3SL1A
chains in the Genus database with same CATH superfamily
5EEMA 3SFFA 5EEKA 1WOHA 4GSMA 1R1OA 2VQJA 1ZZ1A 4FCKA 2VQWG 1HQGA 1TBHA 3C0YA 4G3HA 5ICNB 5G0HA 4ZUPA 4IXVA 1P8PA 3GMZA 1RLAA 3EWFA 4RHMA 4FCIA 5G3WA 4RN2A 3TF3A 3MFWA 4MYKA 4IE3A 4QA2A 5RLAA 4ZUOA 5G17A 1ZZ3A 3F80A 3EW8A 3LHLA 3MZ4A 4ZURA 3MAXA 2A0MA 3SFHA 1W22A 3ZNSA 4CBTA 4Q41A 3NIOA 5EF8A 2EF4A 2V5WA 5G11A 3E8ZA 1T67A 5G0JA 4GSZA 3SJTA 2ZAVA 4LY1A 5HJ9A 2RLAA 4ZUNA 3THEA 4RHQA 4CEVA 5JI5A 1HQFA 5DC5A 3THHA 1T4RA 3SL0A 3NIQA 4GSVA 4Q3QA 2VQVA 5DC7A 4ZUQA 4BZ5A 4QA4A 5G1CA 4BKXB 4Q3TA 5THSA 1P8QA 2PLLA 3ZNRA 3NIPA 3F07A 4RN1A 5G0GA 5EEFA 5EFHA 4Q3RA 5CEVA 5IX0A 5G0YA 3DJ8A 4RHIA 4DZ4A 4BZ6A 1WOGA 4IE2A 3MENA 4ZUMA 1C3SA 2VQMA 4Q3UA 4RHJA 5EEIA 1XFKA 2AEBA 1PQ3A 5D1DA 3RLAA 5EFGA 5G13A 4HWWA 4IE1A 4IXUA 3F06A 5EF7A 4HZEA 4LXZA 3Q9EA 5IWGA 3EZPA 4BZ9A 4IU1A 3M1RA 5THTA 2V5XA 4GWCA 4IU4A 5D1CA 2VCGA 4Q3SA 5EFKB 1VKGA 2GH6A 3MJLA 1T5GA 4QA6A 1P8MA 2EF5A 2CEVA 5EFJD 2VQQA 5EFNA 1C3PA 1GQ7A 3EZTA 3GN0A 1ZPGA 1T4SA 5G0IA 1WOIA 3RQDA 3SKKA 4MYNA 3MZ6A 4A69A 1P8SA 3MMRA 5THUA 4MYLA 2VQOA 3Q9CA 1ZZ0A 3CEVA 4CBYA 3KV2A 4GWDA 4Q3RC 1TA1A 4MYFA 5LI3A 3E9BA 4Q3PA 1T64A 1ZPEA 1P8NA 1P8RA 1T4TA 4Q42A 4RHKA 5EFBD 3MFVA 5FUEA 5D1BA 1GQ6A 5BWZA 4I06A 3C10A 4QA5A 3F0RA 4IU5A 4QA3A 3Q9FA 5EENA 1TBLA 2PHOA 1CEVA 1WVBA 1TBJA 4ITYA 5DC6A 4MXRA 5G12A 4Q40A 4HXQA 1HQHA 3E8QA 3THJA 3PZLA 5DC8A 5THVA 1T4PA 1T69A 3LP7A 4RN0A 4IU0A 3E6KA 1WVAA 3MZ7A 3Q9BA 4Q3VA 1T5FA 4RHLA 4BZ7A 5FCWA 5HJAA 1D3VA 1C3RA 1HQXA 2PHAA 3C0ZA 1HQ5A 5G1BA 4RLAA 3E6VA 5G0XA 5G1AA 5G10A 5A2SA 4BZ8A 4CQFA 3TH7A 4QA1A 3MZ3A 1P8OA 4QA0A 4QA7A 2EIVA 3LP4A 3SL1A
chains in the Genus database with same CATH topology
1WOHA 4GSMA 1R1OA 4FCKA 1HQGA 1TBHA 4G3HA 4IXVA 1P8PA 3GMZA 1RLAA 4RHMA 4FCIA 3TF3A 3MFWA 4MYKA 4IE3A 5RLAA 3F80A 3LHLA 2A0MA 4Q41A 3NIOA 2EF4A 3SJTA 3E8ZA 3THEA 4GSZA 2ZAVA 5HJ9A 2RLAA 4CEVA 4RHQA 1HQFA 3THHA 1T4RA 3SL0A 3NIQA 4GSVA 4Q3QA 4Q3TA 1P8QA 2PLLA 3NIPA 4Q3RA 5CEVA 3DJ8A 4RHIA 4DZ4A 1WOGA 4IE2A 4Q3UA 4RHJA 1XFKA 2AEBA 1PQ3A 3RLAA 4HWWA 4IE1A 4IXUA 4HZEA 4IU1A 3M1RA 4GWCA 4IU4A 4Q3SA 3MJLA 1T5GA 1P8MA 2EF5A 2CEVA 1GQ7A 3GN0A 3SKKA 1ZPGA 1T4SA 1WOIA 4MYNA 1P8SA 3MMRA 4MYLA 3CEVA 3KV2A 4GWDA 4Q3RC 1TA1A 4MYFA 3E9BA 4Q3PA 1ZPEA 1P8NA 1P8RA 1T4TA 4Q42A 4RHKA 3MFVA 1GQ6A 4I06A 4IU5A 1TBLA 2PHOA 1CEVA 1WVBA 1TBJA 4ITYA 4MXRA 4Q40A 4HXQA 1HQHA 3E8QA 3THJA 3PZLA 1T4PA 3LP7A 4IU0A 3E6KA 1WVAA 4Q3VA 1T5FA 4RHLA 5HJAA 1D3VA 1HQXA 2PHAA 1HQ5A 4RLAA 3E6VA 3TH7A 1P8OA 2EIVA 3LP4A 3SL1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1WOH A;  4GSM A;  1R1O A;  4FCK A;  1HQG A;  1TBH A;  4G3H A;  4IXV A;  1P8P A;  3GMZ A;  1RLA A;  4RHM A;  4FCI A;  3TF3 A;  3MFW A;  4MYK A;  4IE3 A;  5RLA A;  3F80 A;  3LHL A;  2A0M A;  4Q41 A;  3NIO A;  2EF4 A;  3SJT A;  3E8Z A;  3THE A;  4GSZ A;  2ZAV A;  5HJ9 A;  2RLA A;  4CEV A;  4RHQ A;  1HQF A;  3THH A;  1T4R A;  3SL0 A;  3NIQ A;  4GSV A;  4Q3Q A;  4Q3T A;  1P8Q A;  2PLL A;  3NIP A;  4Q3R A;  5CEV A;  3DJ8 A;  4RHI A;  4DZ4 A;  1WOG A;  4IE2 A;  4Q3U A;  4RHJ A;  1XFK A;  2AEB A;  1PQ3 A;  3RLA A;  4HWW A;  4IE1 A;  4IXU A;  4HZE A;  4IU1 A;  3M1R A;  4GWC A;  4IU4 A;  4Q3S A;  3MJL A;  1T5G A;  1P8M A;  2EF5 A;  2CEV A;  1GQ7 A;  3GN0 A;  3SKK A;  1ZPG A;  1T4S A;  1WOI A;  4MYN A;  1P8S A;  3MMR A;  4MYL A;  3CEV A;  3KV2 A;  4GWD A;  4Q3R C;  1TA1 A;  4MYF A;  3E9B A;  4Q3P A;  1ZPE A;  1P8N A;  1P8R A;  1T4T A;  4Q42 A;  4RHK A;  3MFV A;  1GQ6 A;  4I06 A;  4IU5 A;  1TBL A;  2PHO A;  1CEV A;  1WVB A;  1TBJ A;  4ITY A;  4MXR A;  4Q40 A;  4HXQ A;  1HQH A;  3E8Q A;  3THJ A;  3PZL A;  1T4P A;  3LP7 A;  4IU0 A;  3E6K A;  1WVA A;  4Q3V A;  1T5F A;  4RHL A;  5HJA A;  1D3V A;  1HQX A;  2PHA A;  1HQ5 A;  4RLA A;  3E6V A;  3TH7 A;  1P8O A;  2EIV A;  3LP4 A;  3SL1 A; 
#chains in the Genus database with same CATH topology
 5EEM A;  3SFF A;  5EEK A;  1WOH A;  4GSM A;  1R1O A;  2VQJ A;  1ZZ1 A;  4FCK A;  2VQW G;  1HQG A;  1TBH A;  3C0Y A;  4G3H A;  5ICN B;  5G0H A;  4ZUP A;  4IXV A;  1P8P A;  3GMZ A;  1RLA A;  3EWF A;  4RHM A;  4FCI A;  5G3W A;  4RN2 A;  3TF3 A;  3MFW A;  4MYK A;  4IE3 A;  4QA2 A;  5RLA A;  4ZUO A;  5G17 A;  1ZZ3 A;  3F80 A;  3EW8 A;  3LHL A;  3MZ4 A;  4ZUR A;  3MAX A;  2A0M A;  3SFH A;  1W22 A;  3ZNS A;  4CBT A;  4Q41 A;  3NIO A;  5EF8 A;  2EF4 A;  2V5W A;  5G11 A;  3E8Z A;  1T67 A;  5G0J A;  4GSZ A;  3SJT A;  2ZAV A;  4LY1 A;  5HJ9 A;  2RLA A;  4ZUN A;  3THE A;  4RHQ A;  4CEV A;  5JI5 A;  1HQF A;  5DC5 A;  3THH A;  1T4R A;  3SL0 A;  3NIQ A;  4GSV A;  4Q3Q A;  2VQV A;  5DC7 A;  4ZUQ A;  4BZ5 A;  4QA4 A;  5G1C A;  4BKX B;  4Q3T A;  5THS A;  1P8Q A;  2PLL A;  3ZNR A;  3NIP A;  3F07 A;  4RN1 A;  5G0G A;  5EEF A;  5EFH A;  4Q3R A;  5CEV A;  5IX0 A;  5G0Y A;  3DJ8 A;  4RHI A;  4DZ4 A;  4BZ6 A;  1WOG A;  4IE2 A;  3MEN A;  4ZUM A;  1C3S A;  2VQM A;  4Q3U A;  4RHJ A;  5EEI A;  1XFK A;  2AEB A;  1PQ3 A;  5D1D A;  3RLA A;  5EFG A;  5G13 A;  4HWW A;  4IE1 A;  4IXU A;  3F06 A;  5EF7 A;  4HZE A;  4LXZ A;  3Q9E A;  5IWG A;  3EZP A;  4BZ9 A;  4IU1 A;  3M1R A;  5THT A;  2V5X A;  4GWC A;  4IU4 A;  5D1C A;  2VCG A;  4Q3S A;  5EFK B;  1VKG A;  2GH6 A;  3MJL A;  1T5G A;  4QA6 A;  1P8M A;  2EF5 A;  2CEV A;  5EFJ D;  2VQQ A;  5EFN A;  1C3P A;  1GQ7 A;  3EZT A;  3GN0 A;  1ZPG A;  1T4S A;  5G0I A;  1WOI A;  3RQD A;  3SKK A;  4MYN A;  3MZ6 A;  4A69 A;  1P8S A;  3MMR A;  5THU A;  4MYL A;  2VQO A;  3Q9C A;  1ZZ0 A;  3CEV A;  4CBY A;  3KV2 A;  4GWD A;  4Q3R C;  1TA1 A;  4MYF A;  5LI3 A;  3E9B A;  4Q3P A;  1T64 A;  1ZPE A;  1P8N A;  1P8R A;  1T4T A;  4Q42 A;  4RHK A;  5EFB D;  3MFV A;  5FUE A;  5D1B A;  1GQ6 A;  5BWZ A;  4I06 A;  3C10 A;  4QA5 A;  3F0R A;  4IU5 A;  4QA3 A;  3Q9F A;  5EEN A;  1TBL A;  2PHO A;  1CEV A;  1WVB A;  1TBJ A;  4ITY A;  5DC6 A;  4MXR A;  5G12 A;  4Q40 A;  4HXQ A;  1HQH A;  3E8Q A;  3THJ A;  3PZL A;  5DC8 A;  5THV A;  1T4P A;  1T69 A;  3LP7 A;  4RN0 A;  4IU0 A;  3E6K A;  1WVA A;  3MZ7 A;  3Q9B A;  4Q3V A;  1T5F A;  4RHL A;  4BZ7 A;  5FCW A;  5HJA A;  1D3V A;  1C3R A;  1HQX A;  2PHA A;  3C0Z A;  1HQ5 A;  5G1B A;  4RLA A;  3E6V A;  5G0X A;  5G1A A;  5G10 A;  5A2S A;  4BZ8 A;  4CQF A;  3TH7 A;  4QA1 A;  3MZ3 A;  1P8O A;  4QA0 A;  4QA7 A;  2EIV A;  3LP4 A;  3SL1 A; 
#chains in the Genus database with same CATH homology
 1WOH A;  4GSM A;  1R1O A;  4FCK A;  1HQG A;  1TBH A;  4G3H A;  4IXV A;  1P8P A;  3GMZ A;  1RLA A;  4RHM A;  4FCI A;  3TF3 A;  3MFW A;  4MYK A;  4IE3 A;  5RLA A;  3F80 A;  3LHL A;  2A0M A;  4Q41 A;  3NIO A;  2EF4 A;  3SJT A;  3E8Z A;  3THE A;  4GSZ A;  2ZAV A;  5HJ9 A;  2RLA A;  4CEV A;  4RHQ A;  1HQF A;  3THH A;  1T4R A;  3SL0 A;  3NIQ A;  4GSV A;  4Q3Q A;  4Q3T A;  1P8Q A;  2PLL A;  3NIP A;  4Q3R A;  5CEV A;  3DJ8 A;  4RHI A;  4DZ4 A;  1WOG A;  4IE2 A;  4Q3U A;  4RHJ A;  1XFK A;  2AEB A;  1PQ3 A;  3RLA A;  4HWW A;  4IE1 A;  4IXU A;  4HZE A;  4IU1 A;  3M1R A;  4GWC A;  4IU4 A;  4Q3S A;  3MJL A;  1T5G A;  1P8M A;  2EF5 A;  2CEV A;  1GQ7 A;  3GN0 A;  3SKK A;  1ZPG A;  1T4S A;  1WOI A;  4MYN A;  1P8S A;  3MMR A;  4MYL A;  3CEV A;  3KV2 A;  4GWD A;  4Q3R C;  1TA1 A;  4MYF A;  3E9B A;  4Q3P A;  1ZPE A;  1P8N A;  1P8R A;  1T4T A;  4Q42 A;  4RHK A;  3MFV A;  1GQ6 A;  4I06 A;  4IU5 A;  1TBL A;  2PHO A;  1CEV A;  1WVB A;  1TBJ A;  4ITY A;  4MXR A;  4Q40 A;  4HXQ A;  1HQH A;  3E8Q A;  3THJ A;  3PZL A;  1T4P A;  3LP7 A;  4IU0 A;  3E6K A;  1WVA A;  4Q3V A;  1T5F A;  4RHL A;  5HJA A;  1D3V A;  1HQX A;  2PHA A;  1HQ5 A;  4RLA A;  3E6V A;  3TH7 A;  1P8O A;  2EIV A;  3LP4 A;  3SL1 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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