3SN9A

Fic protein from neisseria meningitidis mutant s182a/e186a in complex with amppnp
Total Genus 58
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
58
sequence length
158
structure length
158
Chain Sequence
SIDEQSLHNARRLFESGDIDRIEVGTTAGLQQIHRYLFGGLYDFAGQIREDNISKGGFRFANAMYLKEALVKIEQMPERTFEEIIAKYVEMNIAHPFLEGNGRSTRIWLDLVLKKNLKKVVNWQNVSKTLYLQAMERSPVNDLELRFLLKDNLTDDVD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Adenylylation control by intra- or intermolecular active-site obstruction in Fic proteins.
pubmed doi rcsb
source organism Neisseria meningitidis
molecule tags Transferase
molecule keywords Cell filamentation protein Fic-related protein
total genus 58
structure length 158
sequence length 158
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L, M, N, O, P
ec nomenclature ec 2.7.7.n1: Protein adenylyltransferase.
pdb deposition date 2011-06-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02661 Fic Fic/DOC family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.3290.10 Mainly Alpha Orthogonal Bundle Fic-like fold Fido-like domain 3sn9A00
5JFZA 3ZCBA 2VZAA 4M16A 3ZLMA 2G03A 5EU0A 4NPSA 4U0UA 3S6AA 4U0ZA 4LU4A 4ITRA 3ZC7A 3CUCA 5JJ6A 5JJ7A 4U07A 4N67A 4X2DA 4WGJA 3SE5A 4X2CA 5CKLA 2VY3A 3N3UA 2F6SA 4X2EA 3SN9A 2JK8A 4XI8A 5JFFA 4U04A 4U0SA 5CGLA 4PY3A 3SHGA 5CMTA 3LETA
chains in the Genus database with same CATH superfamily
2NUDA 5JFZA 3ZCBA 2VZAA 4M16A 3ZLMA 2G03A 5EU0A 4NPSA 4U0UA 3S6AA 4U0ZA 4ITRA 4LU4A 3ZC7A 3CUCA 5JJ6A 5JJ7A 4U07A 4N67A 4X2DA 4WGJA 3SE5A 4X2CA 5CKLA 2VY3A 3N3UA 2F6SA 1NH1A 4X2EA 2NUNA 3SN9A 2JK8A 4XI8A 5JFFA 4U04A 4U0SA 5CGLA 4PY3A 3SHGA 5CMTA 3LETA
chains in the Genus database with same CATH topology
5JFZA 3ZCBA 2VZAA 4M16A 3ZLMA 2G03A 5EU0A 4NPSA 4U0UA 3S6AA 4U0ZA 4LU4A 4ITRA 3ZC7A 3CUCA 5JJ6A 5JJ7A 4U07A 4N67A 4X2DA 4WGJA 3SE5A 4X2CA 5CKLA 2VY3A 3N3UA 2F6SA 4X2EA 3SN9A 2JK8A 4XI8A 5JFFA 4U04A 4U0SA 5CGLA 4PY3A 3SHGA 5CMTA 3LETA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5JFZ A;  3ZCB A;  2VZA A;  4M16 A;  3ZLM A;  2G03 A;  5EU0 A;  4NPS A;  4U0U A;  3S6A A;  4U0Z A;  4LU4 A;  4ITR A;  3ZC7 A;  3CUC A;  5JJ6 A;  5JJ7 A;  4U07 A;  4N67 A;  4X2D A;  4WGJ A;  3SE5 A;  4X2C A;  5CKL A;  2VY3 A;  3N3U A;  2F6S A;  4X2E A;  3SN9 A;  2JK8 A;  4XI8 A;  5JFF A;  4U04 A;  4U0S A;  5CGL A;  4PY3 A;  3SHG A;  5CMT A;  3LET A; 
#chains in the Genus database with same CATH topology
 2NUD A;  5JFZ A;  3ZCB A;  2VZA A;  4M16 A;  3ZLM A;  2G03 A;  5EU0 A;  4NPS A;  4U0U A;  3S6A A;  4U0Z A;  4ITR A;  4LU4 A;  3ZC7 A;  3CUC A;  5JJ6 A;  5JJ7 A;  4U07 A;  4N67 A;  4X2D A;  4WGJ A;  3SE5 A;  4X2C A;  5CKL A;  2VY3 A;  3N3U A;  2F6S A;  1NH1 A;  4X2E A;  2NUN A;  3SN9 A;  2JK8 A;  4XI8 A;  5JFF A;  4U04 A;  4U0S A;  5CGL A;  4PY3 A;  3SHG A;  5CMT A;  3LET A; 
#chains in the Genus database with same CATH homology
 5JFZ A;  3ZCB A;  2VZA A;  4M16 A;  3ZLM A;  2G03 A;  5EU0 A;  4NPS A;  4U0U A;  3S6A A;  4U0Z A;  4LU4 A;  4ITR A;  3ZC7 A;  3CUC A;  5JJ6 A;  5JJ7 A;  4U07 A;  4N67 A;  4X2D A;  4WGJ A;  3SE5 A;  4X2C A;  5CKL A;  2VY3 A;  3N3U A;  2F6S A;  4X2E A;  3SN9 A;  2JK8 A;  4XI8 A;  5JFF A;  4U04 A;  4U0S A;  5CGL A;  4PY3 A;  3SHG A;  5CMT A;  3LET A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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