3SWEA

Haemophilus influenzae mura in complex with udp-n-acetylmuramic acid and covalent adduct of pep with cys117
Total Genus 142
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
142
sequence length
420
structure length
419
Chain Sequence
MDKFRVYGQSRLSGSVNISGAKNAALPILFAAILATEPVKLTNVPELKDIETTLKILRQLGVVVDRDATGAVLLDASNINHFTAPYELVKTMRASIWALAPLVARFHQGQVSLPGGSIGARPVDLHISGLEKLGADIVLEEGYVKAQVSDRLVGTRIVIEKVSVGATLSIMMAATLAKGTTVIENAAREPEIVDTADFLNKMGAKITGAGSAHITIEGVERLTGCEHSVVPDRIETGTFLIAAAISGGCVVCQNTKADTLDAVIDKLREAGAQVDVTENSITLDMLGNRPKAVNIRTAPHPGFPTDMQAQFTLLNMVAEGTSIITETIFENRFMHIPELIRMGGKAEIEGNTAVCHGVEQLSGTEVIATDLRASISLVLAGCIATGETIVDRIYHIDRGYEHIEDKLRGLGAKIERFSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Functional Consequence of Covalent Reaction of Phosphoenolpyruvate with UDP-N-acetylglucosamine 1-Carboxyvinyltransferase (MurA).
pubmed doi rcsb
molecule tags Transferase
source organism Haemophilus influenzae
molecule keywords UDP-N-acetylglucosamine 1-carboxyvinyltransferase
total genus 142
structure length 419
sequence length 420
ec nomenclature ec 2.5.1.7: UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
pdb deposition date 2011-07-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3sweA02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3sweA01
4E7FA 2PQBA 3ISSA 3UPKA 3SLHA 2GG4A 1P89A 2RL1A 1G6SA 3FJZA 3V5VA 2RL2A 1EJCA 3FJXA 3ROIA 2PQ9A 3SWAA 5BQ2A 3SWQA 2GGDA 4ZNDA 3ZH4A 2PQCA 2O15A 1Q3GA 3SU9A 1G6TA 1RYWA 5BS5A 2O0DA 2Z2CA 3TI2A 4N3PA 1UAEA 3KQAA 3FK1A 3R38A 1X8RA 2AA9A 1DLGA 3KR6A 1P88A 1YBGA 4E7DA 5BUFA 2O0XA 2GGAA 3SWDA 2QFUA 2BJBA 2QFTA 2QFQA 1RF4A 3TR1A 1X8TA 3SG1A 1RF5A 3ZH3A 4EIIA 4R7UA 3SPBA 4E7CA 1A2NA 2QFSA 4E7EA 3SWEA 3SWGA 4E7GA 5U4HA 3NVSA 3VCYA 2AAYA 2O0ZA 3RMTA 4E7BA 2O0BA 1RF6A 1NAWA 2PQDA 3LTHA 1EYNA 3SWIA 3KQJA 2GG6A 4FQDA 1EJDA 2YVWA 3FK0A 4GFPA 3V4TA 1Q36A 1MI4A 2O0EA 4EGRA
chains in the Genus database with same CATH superfamily
4E7FA 2PQBA 3ISSA 3UPKA 3SLHA 2GG4A 1P89A 2RL1A 1G6SA 3FJZA 3V5VA 2RL2A 1EJCA 3FJXA 3ROIA 2PQ9A 3SWAA 5BQ2A 3SWQA 2GGDA 4ZNDA 3ZH4A 2PQCA 2O15A 1Q3GA 1QMIA 3SU9A 1G6TA 1RYWA 5BS5A 2O0DA 2Z2CA 3TI2A 4CLQA 4N3PA 1UAEA 3TV1A 3KQAA 3FK1A 3R38A 1X8RA 2AA9A 1DLGA 3KR6A 1P88A 1YBGA 4E7DA 5BUFA 2O0XA 3PQVA 2GGAA 3SWDA 2QFUA 2BJBA 2QFTA 2QFQA 1RF4A 3TR1A 1X8TA 3SG1A 1RF5A 3ZH3A 4EIIA 4R7UA 3SPBA 4E7CA 1A2NA 2QFSA 4E7EA 3SWEA 3SWGA 1QMHA 4O89A 4E7GA 4O8JA 5U4HA 3NVSA 3VCYA 2AAYA 2O0ZA 3RMTA 4E7BA 2O0BA 1RF6A 1NAWA 2PQDA 3LTHA 1EYNA 3SWIA 3TW3A 3KQJA 2GG6A 4FQDA 1EJDA 3TUTA 3TUXA 2YVWA 3FK0A 4GFPA 3V4TA 3KGDA 1Q36A 1MI4A 2O0EA 4EGRA
chains in the Genus database with same CATH topology
4E7FA 2PQBA 3ISSA 3UPKA 3SLHA 2GG4A 1P89A 2RL1A 1G6SA 3FJZA 3V5VA 2RL2A 1EJCA 3FJXA 3ROIA 2PQ9A 3SWAA 5BQ2A 3SWQA 2GGDA 4ZNDA 3ZH4A 2PQCA 2O15A 1Q3GA 3SU9A 1G6TA 1RYWA 5BS5A 2O0DA 2Z2CA 3TI2A 4N3PA 1UAEA 3KQAA 3FK1A 3R38A 1X8RA 2AA9A 1DLGA 3KR6A 1P88A 1YBGA 4E7DA 5BUFA 2O0XA 2GGAA 3SWDA 2QFUA 2BJBA 2QFTA 2QFQA 1RF4A 3TR1A 1X8TA 3SG1A 1RF5A 3ZH3A 4EIIA 4R7UA 3SPBA 4E7CA 1A2NA 2QFSA 4E7EA 3SWEA 3SWGA 4E7GA 5U4HA 3NVSA 3VCYA 2AAYA 2O0ZA 3RMTA 4E7BA 2O0BA 1RF6A 1NAWA 2PQDA 3LTHA 1EYNA 3SWIA 3KQJA 2GG6A 4FQDA 1EJDA 2YVWA 3FK0A 4GFPA 3V4TA 1Q36A 1MI4A 2O0EA 4EGRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4E7F A;  2PQB A;  3ISS A;  3UPK A;  3SLH A;  2GG4 A;  1P89 A;  2RL1 A;  1G6S A;  3FJZ A;  3V5V A;  2RL2 A;  1EJC A;  3FJX A;  3ROI A;  2PQ9 A;  3SWA A;  5BQ2 A;  3SWQ A;  2GGD A;  4ZND A;  3ZH4 A;  2PQC A;  2O15 A;  1Q3G A;  3SU9 A;  1G6T A;  1RYW A;  5BS5 A;  2O0D A;  2Z2C A;  3TI2 A;  4N3P A;  1UAE A;  3KQA A;  3FK1 A;  3R38 A;  1X8R A;  2AA9 A;  1DLG A;  3KR6 A;  1P88 A;  1YBG A;  4E7D A;  5BUF A;  2O0X A;  2GGA A;  3SWD A;  2QFU A;  2BJB A;  2QFT A;  2QFQ A;  1RF4 A;  3TR1 A;  1X8T A;  3SG1 A;  1RF5 A;  3ZH3 A;  4EII A;  4R7U A;  3SPB A;  4E7C A;  1A2N A;  2QFS A;  4E7E A;  3SWE A;  3SWG A;  4E7G A;  5U4H A;  3NVS A;  3VCY A;  2AAY A;  2O0Z A;  3RMT A;  4E7B A;  2O0B A;  1RF6 A;  1NAW A;  2PQD A;  3LTH A;  1EYN A;  3SWI A;  3KQJ A;  2GG6 A;  4FQD A;  1EJD A;  2YVW A;  3FK0 A;  4GFP A;  3V4T A;  1Q36 A;  1MI4 A;  2O0E A;  4EGR A; 
#chains in the Genus database with same CATH topology
 4E7F A;  2PQB A;  3ISS A;  3UPK A;  3SLH A;  2GG4 A;  1P89 A;  2RL1 A;  1G6S A;  3FJZ A;  3V5V A;  2RL2 A;  1EJC A;  3FJX A;  3ROI A;  2PQ9 A;  3SWA A;  5BQ2 A;  3SWQ A;  2GGD A;  4ZND A;  3ZH4 A;  2PQC A;  2O15 A;  1Q3G A;  1QMI A;  3SU9 A;  1G6T A;  1RYW A;  5BS5 A;  2O0D A;  2Z2C A;  3TI2 A;  4CLQ A;  4N3P A;  1UAE A;  3TV1 A;  3KQA A;  3FK1 A;  3R38 A;  1X8R A;  2AA9 A;  1DLG A;  3KR6 A;  1P88 A;  1YBG A;  4E7D A;  5BUF A;  2O0X A;  3PQV A;  2GGA A;  3SWD A;  2QFU A;  2BJB A;  2QFT A;  2QFQ A;  1RF4 A;  3TR1 A;  1X8T A;  3SG1 A;  1RF5 A;  3ZH3 A;  4EII A;  4R7U A;  3SPB A;  4E7C A;  1A2N A;  2QFS A;  4E7E A;  3SWE A;  3SWG A;  1QMH A;  4O89 A;  4E7G A;  4O8J A;  5U4H A;  3NVS A;  3VCY A;  2AAY A;  2O0Z A;  3RMT A;  4E7B A;  2O0B A;  1RF6 A;  1NAW A;  2PQD A;  3LTH A;  1EYN A;  3SWI A;  3TW3 A;  3KQJ A;  2GG6 A;  4FQD A;  1EJD A;  3TUT A;  3TUX A;  2YVW A;  3FK0 A;  4GFP A;  3V4T A;  3KGD A;  1Q36 A;  1MI4 A;  2O0E A;  4EGR A; 
#chains in the Genus database with same CATH homology
 4E7F A;  2PQB A;  3ISS A;  3UPK A;  3SLH A;  2GG4 A;  1P89 A;  2RL1 A;  1G6S A;  3FJZ A;  3V5V A;  2RL2 A;  1EJC A;  3FJX A;  3ROI A;  2PQ9 A;  3SWA A;  5BQ2 A;  3SWQ A;  2GGD A;  4ZND A;  3ZH4 A;  2PQC A;  2O15 A;  1Q3G A;  3SU9 A;  1G6T A;  1RYW A;  5BS5 A;  2O0D A;  2Z2C A;  3TI2 A;  4N3P A;  1UAE A;  3KQA A;  3FK1 A;  3R38 A;  1X8R A;  2AA9 A;  1DLG A;  3KR6 A;  1P88 A;  1YBG A;  4E7D A;  5BUF A;  2O0X A;  2GGA A;  3SWD A;  2QFU A;  2BJB A;  2QFT A;  2QFQ A;  1RF4 A;  3TR1 A;  1X8T A;  3SG1 A;  1RF5 A;  3ZH3 A;  4EII A;  4R7U A;  3SPB A;  4E7C A;  1A2N A;  2QFS A;  4E7E A;  3SWE A;  3SWG A;  4E7G A;  5U4H A;  3NVS A;  3VCY A;  2AAY A;  2O0Z A;  3RMT A;  4E7B A;  2O0B A;  1RF6 A;  1NAW A;  2PQD A;  3LTH A;  1EYN A;  3SWI A;  3KQJ A;  2GG6 A;  4FQD A;  1EJD A;  2YVW A;  3FK0 A;  4GFP A;  3V4T A;  1Q36 A;  1MI4 A;  2O0E A;  4EGR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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