3SWGA

Aquifex aeolicus mura in complex with udp-n-acetylmuramic acid and covalent adduct of pep with cys124
Total Genus 148
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
148
sequence length
417
structure length
416
Chain Sequence
YRDYFVIRGGKPLTGKVKISGAKNAALPIMFATILTEEPCTITNVPDLLDVRNTLLLLRELGAELEFLNNTVFINPSINSFITNQEIIRRMRASVLSLGPLLGRFGRAVVGLPGGSIGARPIDQHLKFFKEAGADVEVREGYVYVNLKEKRRVHFKFDLVTVTGTENALLYLASVPEESILENIALEPEVMDLIEVLKKMGAHVKVEGRSAYVKGSENLKGFTHSVIPDRIEAGTFMVGAVLTDGEILLENARINHLRAVVEKLKLIGGEVVEENGNLRVFRKESLRACDIETQVYPGFPTDMQAQFMALLSVAKGKSRIKENIFEHRFHHAQELNRLGANITVRGNTAYVEGVERLYGSEVYSTDLRASASLVLAGLVAQGETVVRDVYHLDRGYEKLEEKLKKLGADIERVSEL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords UDP-N-acetylglucosamine 1-carboxyvinyltransferase
publication title Functional Consequence of Covalent Reaction of Phosphoenolpyruvate with UDP-N-acetylglucosamine 1-Carboxyvinyltransferase (MurA).
pubmed doi rcsb
source organism Aquifex aeolicus
total genus 148
structure length 416
sequence length 417
ec nomenclature ec 2.5.1.7: UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
pdb deposition date 2011-07-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3swgA01
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3swgA02
3ZH3A 3ISSA 3VCYA 3RMTA 1DLGA 2QFUA 2GGAA 1X8RA 1RF6A 2Z2CA 1RF4A 1UAEA 1YBGA 4N3PA 2O0EA 1P88A 3FK1A 1EJCA 2PQBA 3KQJA 3KR6A 3SWQA 2QFSA 3FJZA 3TR1A 3SWEA 4EIIA 1NAWA 3SWDA 1MI4A 1Q36A 3SLHA 1RYWA 1P89A 5U4HA 3SWGA 1X8TA 4EGRA 2O15A 1RF5A 3KQAA 3V4TA 4ZNDA 2AAYA 2O0DA 5BUFA 2O0XA 2O0BA 3SU9A 4E7BA 1EJDA 3ROIA 3FJXA 2PQCA 3SWIA 1G6SA 4E7CA 2BJBA 2QFTA 5BS5A 2YVWA 4E7FA 3UPKA 2GG6A 2AA9A 4E7GA 3NVSA 1G6TA 4FQDA 2RL1A 3ZH4A 3SPBA 2RL2A 1A2NA 3SG1A 2PQ9A 5BQ2A 4E7EA 3SWAA 3TI2A 1EYNA 1Q3GA 3V5VA 3LTHA 3FK0A 4E7DA 2GGDA 2QFQA 3R38A 4GFPA 2O0ZA 4R7UA 2PQDA 2GG4A
chains in the Genus database with same CATH superfamily
3ZH3A 3ISSA 3VCYA 3RMTA 1DLGA 4O89A 2QFUA 2GGAA 1X8RA 3PQVA 1RF6A 2Z2CA 1RF4A 1QMHA 1UAEA 1YBGA 4N3PA 3TV1A 2O0EA 4CLQA 1P88A 3FK1A 1EJCA 2PQBA 3KQJA 3KR6A 3SWQA 2QFSA 3FJZA 3TR1A 3SWEA 4EIIA 1NAWA 3SWDA 1MI4A 1Q36A 3SLHA 3TW3A 1RYWA 1P89A 4O8JA 5U4HA 3SWGA 1X8TA 4EGRA 2O15A 1RF5A 3KQAA 3V4TA 3TUTA 4ZNDA 2AAYA 2O0DA 5BUFA 2O0XA 2O0BA 3SU9A 4E7BA 1EJDA 3ROIA 3FJXA 2PQCA 3SWIA 1G6SA 3KGDA 4E7CA 2BJBA 2QFTA 5BS5A 2YVWA 4E7FA 3UPKA 2GG6A 2AA9A 4E7GA 3NVSA 1G6TA 4FQDA 2RL1A 3ZH4A 3SPBA 2RL2A 1A2NA 3SG1A 2PQ9A 5BQ2A 4E7EA 3SWAA 3TI2A 1EYNA 3TUXA 1Q3GA 3V5VA 3LTHA 3FK0A 4E7DA 2GGDA 2QFQA 3R38A 4GFPA 2O0ZA 4R7UA 1QMIA 2PQDA 2GG4A
chains in the Genus database with same CATH topology
3ZH3A 3ISSA 3VCYA 3RMTA 1DLGA 2QFUA 2GGAA 1X8RA 1RF6A 2Z2CA 1RF4A 1UAEA 1YBGA 4N3PA 2O0EA 1P88A 3FK1A 1EJCA 2PQBA 3KQJA 3KR6A 3SWQA 2QFSA 3FJZA 3TR1A 3SWEA 4EIIA 1NAWA 3SWDA 1MI4A 1Q36A 3SLHA 1RYWA 1P89A 5U4HA 3SWGA 1X8TA 4EGRA 2O15A 1RF5A 3KQAA 3V4TA 4ZNDA 2AAYA 2O0DA 5BUFA 2O0XA 2O0BA 3SU9A 4E7BA 1EJDA 3ROIA 3FJXA 2PQCA 3SWIA 1G6SA 4E7CA 2BJBA 2QFTA 5BS5A 2YVWA 4E7FA 3UPKA 2GG6A 2AA9A 4E7GA 3NVSA 1G6TA 4FQDA 2RL1A 3ZH4A 3SPBA 2RL2A 1A2NA 3SG1A 2PQ9A 5BQ2A 4E7EA 3SWAA 3TI2A 1EYNA 1Q3GA 3V5VA 3LTHA 3FK0A 4E7DA 2GGDA 2QFQA 3R38A 4GFPA 2O0ZA 4R7UA 2PQDA 2GG4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3ZH3 A;  3ISS A;  3VCY A;  3RMT A;  1DLG A;  2QFU A;  2GGA A;  1X8R A;  1RF6 A;  2Z2C A;  1RF4 A;  1UAE A;  1YBG A;  4N3P A;  2O0E A;  1P88 A;  3FK1 A;  1EJC A;  2PQB A;  3KQJ A;  3KR6 A;  3SWQ A;  2QFS A;  3FJZ A;  3TR1 A;  3SWE A;  4EII A;  1NAW A;  3SWD A;  1MI4 A;  1Q36 A;  3SLH A;  1RYW A;  1P89 A;  5U4H A;  3SWG A;  1X8T A;  4EGR A;  2O15 A;  1RF5 A;  3KQA A;  3V4T A;  4ZND A;  2AAY A;  2O0D A;  5BUF A;  2O0X A;  2O0B A;  3SU9 A;  4E7B A;  1EJD A;  3ROI A;  3FJX A;  2PQC A;  3SWI A;  1G6S A;  4E7C A;  2BJB A;  2QFT A;  5BS5 A;  2YVW A;  4E7F A;  3UPK A;  2GG6 A;  2AA9 A;  4E7G A;  3NVS A;  1G6T A;  4FQD A;  2RL1 A;  3ZH4 A;  3SPB A;  2RL2 A;  1A2N A;  3SG1 A;  2PQ9 A;  5BQ2 A;  4E7E A;  3SWA A;  3TI2 A;  1EYN A;  1Q3G A;  3V5V A;  3LTH A;  3FK0 A;  4E7D A;  2GGD A;  2QFQ A;  3R38 A;  4GFP A;  2O0Z A;  4R7U A;  2PQD A;  2GG4 A; 
#chains in the Genus database with same CATH topology
 3ZH3 A;  3ISS A;  3VCY A;  3RMT A;  1DLG A;  4O89 A;  2QFU A;  2GGA A;  1X8R A;  3PQV A;  1RF6 A;  2Z2C A;  1RF4 A;  1QMH A;  1UAE A;  1YBG A;  4N3P A;  3TV1 A;  2O0E A;  4CLQ A;  1P88 A;  3FK1 A;  1EJC A;  2PQB A;  3KQJ A;  3KR6 A;  3SWQ A;  2QFS A;  3FJZ A;  3TR1 A;  3SWE A;  4EII A;  1NAW A;  3SWD A;  1MI4 A;  1Q36 A;  3SLH A;  3TW3 A;  1RYW A;  1P89 A;  4O8J A;  5U4H A;  3SWG A;  1X8T A;  4EGR A;  2O15 A;  1RF5 A;  3KQA A;  3V4T A;  3TUT A;  4ZND A;  2AAY A;  2O0D A;  5BUF A;  2O0X A;  2O0B A;  3SU9 A;  4E7B A;  1EJD A;  3ROI A;  3FJX A;  2PQC A;  3SWI A;  1G6S A;  3KGD A;  4E7C A;  2BJB A;  2QFT A;  5BS5 A;  2YVW A;  4E7F A;  3UPK A;  2GG6 A;  2AA9 A;  4E7G A;  3NVS A;  1G6T A;  4FQD A;  2RL1 A;  3ZH4 A;  3SPB A;  2RL2 A;  1A2N A;  3SG1 A;  2PQ9 A;  5BQ2 A;  4E7E A;  3SWA A;  3TI2 A;  1EYN A;  3TUX A;  1Q3G A;  3V5V A;  3LTH A;  3FK0 A;  4E7D A;  2GGD A;  2QFQ A;  3R38 A;  4GFP A;  2O0Z A;  4R7U A;  1QMI A;  2PQD A;  2GG4 A; 
#chains in the Genus database with same CATH homology
 3ZH3 A;  3ISS A;  3VCY A;  3RMT A;  1DLG A;  2QFU A;  2GGA A;  1X8R A;  1RF6 A;  2Z2C A;  1RF4 A;  1UAE A;  1YBG A;  4N3P A;  2O0E A;  1P88 A;  3FK1 A;  1EJC A;  2PQB A;  3KQJ A;  3KR6 A;  3SWQ A;  2QFS A;  3FJZ A;  3TR1 A;  3SWE A;  4EII A;  1NAW A;  3SWD A;  1MI4 A;  1Q36 A;  3SLH A;  1RYW A;  1P89 A;  5U4H A;  3SWG A;  1X8T A;  4EGR A;  2O15 A;  1RF5 A;  3KQA A;  3V4T A;  4ZND A;  2AAY A;  2O0D A;  5BUF A;  2O0X A;  2O0B A;  3SU9 A;  4E7B A;  1EJD A;  3ROI A;  3FJX A;  2PQC A;  3SWI A;  1G6S A;  4E7C A;  2BJB A;  2QFT A;  5BS5 A;  2YVW A;  4E7F A;  3UPK A;  2GG6 A;  2AA9 A;  4E7G A;  3NVS A;  1G6T A;  4FQD A;  2RL1 A;  3ZH4 A;  3SPB A;  2RL2 A;  1A2N A;  3SG1 A;  2PQ9 A;  5BQ2 A;  4E7E A;  3SWA A;  3TI2 A;  1EYN A;  1Q3G A;  3V5V A;  3LTH A;  3FK0 A;  4E7D A;  2GGD A;  2QFQ A;  3R38 A;  4GFP A;  2O0Z A;  4R7U A;  2PQD A;  2GG4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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