3SXVA

Crystal structure of the complex of goat lactoperoxidase with amitrole at 2.1 a resolution
Total Genus 186
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
186
sequence length
595
structure length
594
Chain Sequence
SWEVGCGAPVPLVTCDEQSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLAVPFGWTQRKTRNGFRVPLAREVSNKIVGYLDEEGVLDQNRSLLFMQWGQIVDHDLDFAPETELGSSEHSKVQCEEYCVQGDECFPIMFPKNDPKLKTQGKCMPFFRAGFVCPTPPYQSLARDQINAVTSFLDASLVYGSEPLASRLRNLSSPLGLMAVNQEAWDHGLAYPPFNNVKPSPCEFINTTAHVPCFQAGDSRASEQILLATVHTLLLREHNRLARELKRLNPHWDGEMLYQEARKILGAFIQIITFRDYLPIVLGSEMQKWIPPYQGYNNSVDPRISNVFTFAFRFGHMEVPSTVSRLDENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLVRGLLAKNSKLMNQNKMVTSELRNKLFQPTHKVHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQAVLKNKVLAKKLLDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENPGVFTEKQRDSLQKVSFSRLICDNTHITKVPLHAFQANNYPHDFVDCSAVDKLDLSPWASREN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase/oxidoreductase inhibitor
molecule keywords Lactoperoxidase
publication title Crystal structure of the complex of goat lactoperoxidase with amitrole at 2.1 A resolution
rcsb
total genus 186
structure length 594
sequence length 595
ec nomenclature ec 1.11.1.7: Peroxidase.
pdb deposition date 2011-07-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03098 An_peroxidase Animal haem peroxidase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.640.10 Mainly Alpha Orthogonal Bundle Myeloperoxidase, subunit C Haem peroxidase domain superfamily, animal type 3sxvA00
3HS7A 1PXXA 1DNWC 1CQEA 3S4FA 1DDXA 3PGHA 1DIYA 2NQXA 4KVJA 5FF1A 2IPSA 1PRHA 3N8WB 4IG5A 1CXPC 3FNLA 3N8YB 1IGZA 3ZS1C 3Q9KA 6COXA 3GCKA 5COXA 1CVUA 3FAQA 5FIWC 1EQGA 4Y55A 1PGEA 2R5LA 3MQEA 1EBVA 3I6NA 4MSFA 3N8VA 3ERHA 4COXA 1EQHA 2QQTA 4QYQA 3SXVA 3TZIA 3R5OA 3NIUA 3GC1A 3ZS0C 1FE2A 1MHLC 4NJBA 3QMOA 4FM5A 2EFBA 4NT3A 1D7WC 3N8ZA 5F1AA 5B72A 4O1ZA 4KVKA 4E1GA 1Q4GA 5FDQA 4C1MC 1HT5A 3KRQA 4M10A 2IKCA 3OLTA 2EHAA 3NT1A 3N8WA 3R4XA 3GCJA 3N8YA 3ERIA 5GLSA 4PH9A 3N8XA 2E9EA 5JVYA 4RS0A 4GM7A 3OGWA 4RRWA 3KRKA 3KK6A 2AYLA 3V6QA 1IGXA 3HS6A 1MYPC 3MDLA 2QPKA 3NTBA 3UBAA 3N8FA 5IKQA 1DNUC 3NTGA 5IKTA 3RR3A 5JW1A 5JVZA 3HS5A 4RRZA 4DL1C 2GJMA 1PTHA 2PUMA 4RRYA 3RKEA 4M11A 4Z0LA 5IKVA 3R5QA 3BXIA 3PY4A 4HHSA 3GCLA 3TGYA 4RUTA 3LN0A 1CX2A 3OLUA 4GN6A 3QH0A 2OYUP 2QRBA 1HT8A 3QL6A 4HHRA 2Z5ZA 3F9PC 1U67A 4KSZA 3LN1A 4OTYA 5KIRA 2OJVA 4RRXA 4LJJA 4KVLA 3NAKA 4OEKA 3NYHA 4QJQA 5IKRA 3Q7DA 2OYEP 5GH0A 5F19A 2O86A 4N7AA 4OTJA 4PNXA 5HPWA 1D5LC 2PT3A 3QF1A 1D2VC 3R55A
chains in the Genus database with same CATH superfamily
3HS7A 1PXXA 1DNWC 1CQEA 3S4FA 1DDXA 3PGHA 1DIYA 2NQXA 4KVJA 5FF1A 2IPSA 1PRHA 3N8WB 4IG5A 1CXPC 3FNLA 3N8YB 1IGZA 3ZS1C 3Q9KA 6COXA 3GCKA 5COXA 1CVUA 3FAQA 5FIWC 1EQGA 4Y55A 1PGEA 2R5LA 3MQEA 1EBVA 3I6NA 4MSFA 3N8VA 3ERHA 4COXA 1EQHA 2QQTA 4QYQA 3SXVA 3TZIA 3R5OA 3NIUA 3GC1A 3ZS0C 1FE2A 1MHLC 4NJBA 3QMOA 4FM5A 2EFBA 4NT3A 1D7WC 3N8ZA 5F1AA 5B72A 4O1ZA 4KVKA 4E1GA 1Q4GA 5FDQA 4C1MC 1HT5A 3KRQA 4M10A 2IKCA 3OLTA 2EHAA 3NT1A 3N8WA 3R4XA 3GCJA 3N8YA 3ERIA 5GLSA 4PH9A 3N8XA 2E9EA 5JVYA 4RS0A 4GM7A 3OGWA 4RRWA 3KRKA 3KK6A 2AYLA 3V6QA 1IGXA 3HS6A 1MYPC 3MDLA 2QPKA 3NTBA 3UBAA 3N8FA 5IKQA 1DNUC 3NTGA 5IKTA 3RR3A 5JW1A 5JVZA 3HS5A 4RRZA 4DL1C 2GJMA 1PTHA 2PUMA 4RRYA 3RKEA 4M11A 4Z0LA 5IKVA 3R5QA 3BXIA 3PY4A 4HHSA 3GCLA 3TGYA 4RUTA 3LN0A 1CX2A 3OLUA 4GN6A 3QH0A 2OYUP 2QRBA 1HT8A 3QL6A 4HHRA 2Z5ZA 3F9PC 1U67A 4KSZA 3LN1A 4OTYA 5KIRA 2OJVA 4RRXA 4LJJA 4KVLA 3NAKA 4OEKA 3NYHA 4QJQA 5IKRA 3Q7DA 2OYEP 5GH0A 5F19A 2O86A 4N7AA 4OTJA 4PNXA 5HPWA 1D5LC 2PT3A 3QF1A 1D2VC 3R55A
chains in the Genus database with same CATH topology
3HS7A 1PXXA 1DNWC 1CQEA 3S4FA 1DDXA 3PGHA 1DIYA 2NQXA 4KVJA 5FF1A 2IPSA 1PRHA 3N8WB 4IG5A 1CXPC 3FNLA 3N8YB 1IGZA 3ZS1C 3Q9KA 6COXA 3GCKA 5COXA 1CVUA 3FAQA 5FIWC 1EQGA 4Y55A 1PGEA 2R5LA 3MQEA 1EBVA 3I6NA 4MSFA 3N8VA 3ERHA 4COXA 1EQHA 2QQTA 4QYQA 3SXVA 3TZIA 3R5OA 3NIUA 3GC1A 3ZS0C 1FE2A 1MHLC 4NJBA 3QMOA 4FM5A 2EFBA 4NT3A 1D7WC 3N8ZA 5F1AA 5B72A 4O1ZA 4KVKA 4E1GA 1Q4GA 5FDQA 4C1MC 1HT5A 3KRQA 4M10A 2IKCA 3OLTA 2EHAA 3NT1A 3N8WA 3R4XA 3GCJA 3N8YA 3ERIA 5GLSA 4PH9A 3N8XA 2E9EA 5JVYA 4RS0A 4GM7A 3OGWA 4RRWA 3KRKA 3KK6A 2AYLA 3V6QA 1IGXA 3HS6A 1MYPC 3MDLA 2QPKA 3NTBA 3UBAA 3N8FA 5IKQA 1DNUC 3NTGA 5IKTA 3RR3A 5JW1A 5JVZA 3HS5A 4RRZA 4DL1C 2GJMA 1PTHA 2PUMA 4RRYA 3RKEA 4M11A 4Z0LA 5IKVA 3R5QA 3BXIA 3PY4A 4HHSA 3GCLA 3TGYA 4RUTA 3LN0A 1CX2A 3OLUA 4GN6A 3QH0A 2OYUP 2QRBA 1HT8A 3QL6A 4HHRA 2Z5ZA 3F9PC 1U67A 4KSZA 3LN1A 4OTYA 5KIRA 2OJVA 4RRXA 4LJJA 4KVLA 3NAKA 4OEKA 3NYHA 4QJQA 5IKRA 3Q7DA 2OYEP 5GH0A 5F19A 2O86A 4N7AA 4OTJA 4PNXA 5HPWA 1D5LC 2PT3A 3QF1A 1D2VC 3R55A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HS7 A;  1PXX A;  1DNW C;  1CQE A;  3S4F A;  1DDX A;  3PGH A;  1DIY A;  2NQX A;  4KVJ A;  5FF1 A;  2IPS A;  1PRH A;  3N8W B;  4IG5 A;  1CXP C;  3FNL A;  3N8Y B;  1IGZ A;  3ZS1 C;  3Q9K A;  6COX A;  3GCK A;  5COX A;  1CVU A;  3FAQ A;  5FIW C;  1EQG A;  4Y55 A;  1PGE A;  2R5L A;  3MQE A;  1EBV A;  3I6N A;  4MSF A;  3N8V A;  3ERH A;  4COX A;  1EQH A;  2QQT A;  4QYQ A;  3SXV A;  3TZI A;  3R5O A;  3NIU A;  3GC1 A;  3ZS0 C;  1FE2 A;  1MHL C;  4NJB A;  3QMO A;  4FM5 A;  2EFB A;  4NT3 A;  1D7W C;  3N8Z A;  5F1A A;  5B72 A;  4O1Z A;  4KVK A;  4E1G A;  1Q4G A;  5FDQ A;  4C1M C;  1HT5 A;  3KRQ A;  4M10 A;  2IKC A;  3OLT A;  2EHA A;  3NT1 A;  3N8W A;  3R4X A;  3GCJ A;  3N8Y A;  3ERI A;  5GLS A;  4PH9 A;  3N8X A;  2E9E A;  5JVY A;  4RS0 A;  4GM7 A;  3OGW A;  4RRW A;  3KRK A;  3KK6 A;  2AYL A;  3V6Q A;  1IGX A;  3HS6 A;  1MYP C;  3MDL A;  2QPK A;  3NTB A;  3UBA A;  3N8F A;  5IKQ A;  1DNU C;  3NTG A;  5IKT A;  3RR3 A;  5JW1 A;  5JVZ A;  3HS5 A;  4RRZ A;  4DL1 C;  2GJM A;  1PTH A;  2PUM A;  4RRY A;  3RKE A;  4M11 A;  4Z0L A;  5IKV A;  3R5Q A;  3BXI A;  3PY4 A;  4HHS A;  3GCL A;  3TGY A;  4RUT A;  3LN0 A;  1CX2 A;  3OLU A;  4GN6 A;  3QH0 A;  2OYU P;  2QRB A;  1HT8 A;  3QL6 A;  4HHR A;  2Z5Z A;  3F9P C;  1U67 A;  4KSZ A;  3LN1 A;  4OTY A;  5KIR A;  2OJV A;  4RRX A;  4LJJ A;  4KVL A;  3NAK A;  4OEK A;  3NYH A;  4QJQ A;  5IKR A;  3Q7D A;  2OYE P;  5GH0 A;  5F19 A;  2O86 A;  4N7A A;  4OTJ A;  4PNX A;  5HPW A;  1D5L C;  2PT3 A;  3QF1 A;  1D2V C;  3R55 A; 
#chains in the Genus database with same CATH topology
 3HS7 A;  1PXX A;  1DNW C;  1CQE A;  3S4F A;  1DDX A;  3PGH A;  1DIY A;  2NQX A;  4KVJ A;  5FF1 A;  2IPS A;  1PRH A;  3N8W B;  4IG5 A;  1CXP C;  3FNL A;  3N8Y B;  1IGZ A;  3ZS1 C;  3Q9K A;  6COX A;  3GCK A;  5COX A;  1CVU A;  3FAQ A;  5FIW C;  1EQG A;  4Y55 A;  1PGE A;  2R5L A;  3MQE A;  1EBV A;  3I6N A;  4MSF A;  3N8V A;  3ERH A;  4COX A;  1EQH A;  2QQT A;  4QYQ A;  3SXV A;  3TZI A;  3R5O A;  3NIU A;  3GC1 A;  3ZS0 C;  1FE2 A;  1MHL C;  4NJB A;  3QMO A;  4FM5 A;  2EFB A;  4NT3 A;  1D7W C;  3N8Z A;  5F1A A;  5B72 A;  4O1Z A;  4KVK A;  4E1G A;  1Q4G A;  5FDQ A;  4C1M C;  1HT5 A;  3KRQ A;  4M10 A;  2IKC A;  3OLT A;  2EHA A;  3NT1 A;  3N8W A;  3R4X A;  3GCJ A;  3N8Y A;  3ERI A;  5GLS A;  4PH9 A;  3N8X A;  2E9E A;  5JVY A;  4RS0 A;  4GM7 A;  3OGW A;  4RRW A;  3KRK A;  3KK6 A;  2AYL A;  3V6Q A;  1IGX A;  3HS6 A;  1MYP C;  3MDL A;  2QPK A;  3NTB A;  3UBA A;  3N8F A;  5IKQ A;  1DNU C;  3NTG A;  5IKT A;  3RR3 A;  5JW1 A;  5JVZ A;  3HS5 A;  4RRZ A;  4DL1 C;  2GJM A;  1PTH A;  2PUM A;  4RRY A;  3RKE A;  4M11 A;  4Z0L A;  5IKV A;  3R5Q A;  3BXI A;  3PY4 A;  4HHS A;  3GCL A;  3TGY A;  4RUT A;  3LN0 A;  1CX2 A;  3OLU A;  4GN6 A;  3QH0 A;  2OYU P;  2QRB A;  1HT8 A;  3QL6 A;  4HHR A;  2Z5Z A;  3F9P C;  1U67 A;  4KSZ A;  3LN1 A;  4OTY A;  5KIR A;  2OJV A;  4RRX A;  4LJJ A;  4KVL A;  3NAK A;  4OEK A;  3NYH A;  4QJQ A;  5IKR A;  3Q7D A;  2OYE P;  5GH0 A;  5F19 A;  2O86 A;  4N7A A;  4OTJ A;  4PNX A;  5HPW A;  1D5L C;  2PT3 A;  3QF1 A;  1D2V C;  3R55 A; 
#chains in the Genus database with same CATH homology
 3HS7 A;  1PXX A;  1DNW C;  1CQE A;  3S4F A;  1DDX A;  3PGH A;  1DIY A;  2NQX A;  4KVJ A;  5FF1 A;  2IPS A;  1PRH A;  3N8W B;  4IG5 A;  1CXP C;  3FNL A;  3N8Y B;  1IGZ A;  3ZS1 C;  3Q9K A;  6COX A;  3GCK A;  5COX A;  1CVU A;  3FAQ A;  5FIW C;  1EQG A;  4Y55 A;  1PGE A;  2R5L A;  3MQE A;  1EBV A;  3I6N A;  4MSF A;  3N8V A;  3ERH A;  4COX A;  1EQH A;  2QQT A;  4QYQ A;  3SXV A;  3TZI A;  3R5O A;  3NIU A;  3GC1 A;  3ZS0 C;  1FE2 A;  1MHL C;  4NJB A;  3QMO A;  4FM5 A;  2EFB A;  4NT3 A;  1D7W C;  3N8Z A;  5F1A A;  5B72 A;  4O1Z A;  4KVK A;  4E1G A;  1Q4G A;  5FDQ A;  4C1M C;  1HT5 A;  3KRQ A;  4M10 A;  2IKC A;  3OLT A;  2EHA A;  3NT1 A;  3N8W A;  3R4X A;  3GCJ A;  3N8Y A;  3ERI A;  5GLS A;  4PH9 A;  3N8X A;  2E9E A;  5JVY A;  4RS0 A;  4GM7 A;  3OGW A;  4RRW A;  3KRK A;  3KK6 A;  2AYL A;  3V6Q A;  1IGX A;  3HS6 A;  1MYP C;  3MDL A;  2QPK A;  3NTB A;  3UBA A;  3N8F A;  5IKQ A;  1DNU C;  3NTG A;  5IKT A;  3RR3 A;  5JW1 A;  5JVZ A;  3HS5 A;  4RRZ A;  4DL1 C;  2GJM A;  1PTH A;  2PUM A;  4RRY A;  3RKE A;  4M11 A;  4Z0L A;  5IKV A;  3R5Q A;  3BXI A;  3PY4 A;  4HHS A;  3GCL A;  3TGY A;  4RUT A;  3LN0 A;  1CX2 A;  3OLU A;  4GN6 A;  3QH0 A;  2OYU P;  2QRB A;  1HT8 A;  3QL6 A;  4HHR A;  2Z5Z A;  3F9P C;  1U67 A;  4KSZ A;  3LN1 A;  4OTY A;  5KIR A;  2OJV A;  4RRX A;  4LJJ A;  4KVL A;  3NAK A;  4OEK A;  3NYH A;  4QJQ A;  5IKR A;  3Q7D A;  2OYE P;  5GH0 A;  5F19 A;  2O86 A;  4N7A A;  4OTJ A;  4PNX A;  5HPW A;  1D5L C;  2PT3 A;  3QF1 A;  1D2V C;  3R55 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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