3TL8B

The avrptob-bak1 complex reveals two structurally similar kinaseinteracting domains in a single type iii effector
Total Genus 24
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
24
sequence length
87
structure length
87
Chain Sequence
b'IRVDRAAMRNRGNDEADAALRGLVQQGVNLEHLRTALERHVMQRLPIPLDIGSALQNVGINPSIDLGESLVQHPLLNLNVALNRMLG'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
publication title Structural Analysis of Pseudomonas syringae AvrPtoB Bound to Host BAK1 Reveals Two Similar Kinase-Interacting Domains in a Type III Effector.
pubmed doi rcsb
source organism Arabidopsis thaliana
molecule tags Transferase/ligase
total genus 24
structure length 87
sequence length 87
chains with identical sequence F, K, L
ec nomenclature
pdb deposition date 2011-08-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF16847 AvrPtoB_bdg Avirulence AvrPtoB, BAK1-binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.220 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 3tl8B00
2LF6A 2LF3A 3TL8B
chains in the Genus database with same CATH superfamily
1XVCE 2DEBA 3C6NB 4FJ9A 1FZ2E 4DTXA 3LD8A 4JRQA 2FYOA 4GAMC 3KD5E 4FJKA 4HCBA 1JW2A 2B1EA 4I9LA 1P22A 3SVIA 4FJ5A 4DTNA 3QESA 2P5GA 2FW3A 2MZWB 4IT5A 4RG8A 5H37A 1MHYG 3E4YA 1IH7A 5IREA 3L1NA 3S9HA 3RWUA 1XVEE 4FK0A 4M3UA 3HGLA 4ADNA 1MHZG 3SI6A 4AI6A 4QNCA 4FJHA 2OVPB 3QEXA 2JH8A 3C94A 1MTYG 3LZJA 2RKHA 3SUOA 1FS1A 3OGKB 3TAFA 3QNOA 2E32A 3SUNA 2MMBA 3N1BA 3SUQA 3SJJA 3K2OA 4M42A 4J2BA 5IZ7A 3NCIA 1XVDE 3TABA 1MMOG 1FZ1E 1XMHE 4DU4A 4DTRA 3QNNA 3CFPA 4M3WA 1FZ4E 4JS4A 2DY4A 2OZSA 2P1OB 3L2OB 3SPYA 2OYQA 3QEVA 2HD0A 4FJJA 4KHNA 1XMGE 1XMFE 4DTOA 1XU3E 3C95A 4EP9A 4X5NA 4DTUA 2P1QB 4M3TA 3CFOA 1FZHE 3UO3A 3L8BA 2OVRB 1Q9YA 4KHUA 3LDBA 3HL8A 1FZIE 3CFRA 1XVFE 2PFVA 4E3SA 3SUPA 3CQ8A 4KHWA 2B8IA 2JH9A 4M41A 4B08A 1FZ5E 4DTSA 2LF6A 2OVQB 2P1PB 4JRPA 3QEWA 4I6JB 4DU3A 3SQ0A 2MW2A 3L0MA 4DTJA 2YB5A 3RMBA 4HCCA 4FJXA 3QEPA 4DU1A 4I9QA 4AKGA 3WSOA 2JQTA 4DTMA 3TAGA 4FK2A 4FJIA 1N1CA 1XU5E 4ICGC 2P5OA 2OZMA 4AKIA 4AKHA 1CLQA 2P1MB 4J2AA 4RL5A 2LF3A 4FJNA 1FZ8E 2VJ5A 1IG9A 3MKSB 3TL8B 4FJMA 3BVOA 1WAFA 4FK4A 3SPZA 5IBKB 2ATQA 3HGKE 2JHAA 3OGMB 4EYWA 3V7DB 3NDKA 2JHCA 3QETA 2B7MA 3J27A 4M45A 2DTUA 1FYZE 3NAEA 4RNGA 3RMAA 1XL3C 4QNDA 1FZ6E 1WAJA 3C6OB 4ADOA 4J2EA 4KI6A 1NEXB 1FZ7E 3LDSA 3SNNA 1LDKE 2K5SA 3TJYA 4M3XA 4E4BA 4KHYA 1FPOA 2JHPA 3SQ4A 3OGLB 3NGIA 4FJLA 3HP9A 3NE6A 2PFTA 2P1NB 3SQ1A 4JS5A 3SCXA 4FJ7A 3N1EA 3NHGA 1FZ9E 3UIQA 2H4TA 2E31A 2RCUA 4FJ8A 3E4WA 3SQ2A 4M3ZA 3RMDA 4J2DA 1XVBE 3J2PA 3LZIA 2JPNA 2QXFA 4M3YA 4M3RA 3QEIA 4EPHA 1FXXA 4KI4A 1FZ3E 4DTPA 3TAEA 4X5MA 3KD1E 3QERA 3UO2A 1Q9XA 4KHQA 1XVGE 2VJ4A 4FVMA 4FJGA 3RMCA 4KHSA 2VIXA 1FZ0E 3C6PB
chains in the Genus database with same CATH topology
1XVCE 2DEBA 3C6NB 4FJ9A 1FZ2E 4DTXA 3LD8A 4JRQA 2FYOA 4GAMC 3KD5E 4FJKA 4HCBA 2B1EA 4I9LA 1P22A 3SVIA 4FJ5A 4DTNA 3QESA 2P5GA 2FW3A 2MZWB 4RG8A 5IREA 5H37A 1MHYG 3E4YA 1IH7A 3S9HA 3L1NA 3RWUA 1XVEE 4FK0A 4M3UA 3HGLA 4ADNA 1MHZG 3SI6A 4AI6A 4QNCA 4FJHA 2OVPB 3QEXA 2JH8A 3C94A 1MTYG 3LZJA 3SUOA 1FS1A 3OGKB 3TAFA 3QNOA 2E32A 3SUNA 2MMBA 3N1BA 3SUQA 3SJJA 3K2OA 4M42A 4J2BA 5IZ7A 3NCIA 1XVDE 3TABA 1MMOG 1FZ1E 1XMHE 4DU4A 4DTRA 3QNNA 3CFPA 4M3WA 1FZ4E 4JS4A 2DY4A 2OZSA 2P1OB 3L2OB 3SPYA 2OYQA 3QEVA 2HD0A 4FJJA 4KHNA 1XMGE 1XMFE 4DTOA 1XU3E 3C95A 4EP9A 4X5NA 4DTUA 2P1QB 4M3TA 3CFOA 1FZHE 3L8BA 2OVRB 1Q9YA 4KHUA 3LDBA 3HL8A 1FZIE 3CFRA 1XVFE 2PFVA 4E3SA 3SUPA 3CQ8A 4KHWA 2B8IA 2JH9A 4M41A 4B08A 1FZ5E 4DTSA 2LF6A 2OVQB 2P1PB 4JRPA 3QEWA 4I6JB 4DU3A 3SQ0A 3L0MA 4DTJA 4FJXA 2YB5A 3RMBA 4HCCA 4AKGA 3QEPA 4DU1A 4I9QA 3WSOA 4DTMA 3TAGA 4FK2A 4FJIA 1XU5E 4AKIA 2P5OA 2OZMA 4AKHA 1CLQA 2P1MB 4J2AA 4RL5A 2LF3A 4FJNA 1FZ8E 2VJ5A 1IG9A 3MKSB 3TL8B 4FJMA 1WAFA 4FK4A 3SPZA 5IBKB 2ATQA 3HGKE 2JHAA 3OGMB 4EYWA 3V7DB 3NDKA 2JHCA 3QETA 2B7MA 3J27A 4M45A 2DTUA 1FYZE 3NAEA 4RNGA 3RMAA 1XL3C 4QNDA 1FZ6E 1WAJA 3C6OB 4ADOA 4J2EA 4KI6A 1NEXB 1FZ7E 3LDSA 3SNNA 1LDKE 3TJYA 4M3XA 4KHYA 4E4BA 2JHPA 3SQ4A 3OGLB 3NGIA 4FJLA 3HP9A 3NE6A 2PFTA 2P1NB 3SQ1A 4JS5A 3SCXA 4FJ7A 3N1EA 3NHGA 1FZ9E 3UIQA 2H4TA 2E31A 2RCUA 4FJ8A 3E4WA 3SQ2A 4M3ZA 3RMDA 4J2DA 1XVBE 3J2PA 3LZIA 2JPNA 2QXFA 4M3YA 4M3RA 3QEIA 4EPHA 1FXXA 4KI4A 1FZ3E 4DTPA 3TAEA 4X5MA 3KD1E 3QERA 1Q9XA 4KHQA 1XVGE 2VJ4A 4FVMA 4FJGA 3RMCA 4KHSA 2VIXA 1FZ0E 3C6PB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2LF6 A;  2LF3 A;  3TL8 B; 
#chains in the Genus database with same CATH topology
 1XVC E;  2DEB A;  3C6N B;  4FJ9 A;  1FZ2 E;  4DTX A;  3LD8 A;  4JRQ A;  2FYO A;  4GAM C;  3KD5 E;  4FJK A;  4HCB A;  1JW2 A;  2B1E A;  4I9L A;  1P22 A;  3SVI A;  4FJ5 A;  4DTN A;  3QES A;  2P5G A;  2FW3 A;  2MZW B;  4IT5 A;  4RG8 A;  5H37 A;  1MHY G;  3E4Y A;  1IH7 A;  5IRE A;  3L1N A;  3S9H A;  3RWU A;  1XVE E;  4FK0 A;  4M3U A;  3HGL A;  4ADN A;  1MHZ G;  3SI6 A;  4AI6 A;  4QNC A;  4FJH A;  2OVP B;  3QEX A;  2JH8 A;  3C94 A;  1MTY G;  3LZJ A;  2RKH A;  3SUO A;  1FS1 A;  3OGK B;  3TAF A;  3QNO A;  2E32 A;  3SUN A;  2MMB A;  3N1B A;  3SUQ A;  3SJJ A;  3K2O A;  4M42 A;  4J2B A;  5IZ7 A;  3NCI A;  1XVD E;  3TAB A;  1MMO G;  1FZ1 E;  1XMH E;  4DU4 A;  4DTR A;  3QNN A;  3CFP A;  4M3W A;  1FZ4 E;  4JS4 A;  2DY4 A;  2OZS A;  2P1O B;  3L2O B;  3SPY A;  2OYQ A;  3QEV A;  2HD0 A;  4FJJ A;  4KHN A;  1XMG E;  1XMF E;  4DTO A;  1XU3 E;  3C95 A;  4EP9 A;  4X5N A;  4DTU A;  2P1Q B;  4M3T A;  3CFO A;  1FZH E;  3UO3 A;  3L8B A;  2OVR B;  1Q9Y A;  4KHU A;  3LDB A;  3HL8 A;  1FZI E;  3CFR A;  1XVF E;  2PFV A;  4E3S A;  3SUP A;  3CQ8 A;  4KHW A;  2B8I A;  2JH9 A;  4M41 A;  4B08 A;  1FZ5 E;  4DTS A;  2LF6 A;  2OVQ B;  2P1P B;  4JRP A;  3QEW A;  4I6J B;  4DU3 A;  3SQ0 A;  2MW2 A;  3L0M A;  4DTJ A;  2YB5 A;  3RMB A;  4HCC A;  4FJX A;  3QEP A;  4DU1 A;  4I9Q A;  4AKG A;  3WSO A;  2JQT A;  4DTM A;  3TAG A;  4FK2 A;  4FJI A;  1N1C A;  1XU5 E;  4ICG C;  2P5O A;  2OZM A;  4AKI A;  4AKH A;  1CLQ A;  2P1M B;  4J2A A;  4RL5 A;  2LF3 A;  4FJN A;  1FZ8 E;  2VJ5 A;  1IG9 A;  3MKS B;  3TL8 B;  4FJM A;  3BVO A;  1WAF A;  4FK4 A;  3SPZ A;  5IBK B;  2ATQ A;  3HGK E;  2JHA A;  3OGM B;  4EYW A;  3V7D B;  3NDK A;  2JHC A;  3QET A;  2B7M A;  3J27 A;  4M45 A;  2DTU A;  1FYZ E;  3NAE A;  4RNG A;  3RMA A;  1XL3 C;  4QND A;  1FZ6 E;  1WAJ A;  3C6O B;  4ADO A;  4J2E A;  4KI6 A;  1NEX B;  1FZ7 E;  3LDS A;  3SNN A;  1LDK E;  2K5S A;  3TJY A;  4M3X A;  4E4B A;  4KHY A;  1FPO A;  2JHP A;  3SQ4 A;  3OGL B;  3NGI A;  4FJL A;  3HP9 A;  3NE6 A;  2PFT A;  2P1N B;  3SQ1 A;  4JS5 A;  3SCX A;  4FJ7 A;  3N1E A;  3NHG A;  1FZ9 E;  3UIQ A;  2H4T A;  2E31 A;  2RCU A;  4FJ8 A;  3E4W A;  3SQ2 A;  4M3Z A;  3RMD A;  4J2D A;  1XVB E;  3J2P A;  3LZI A;  2JPN A;  2QXF A;  4M3Y A;  4M3R A;  3QEI A;  4EPH A;  1FXX A;  4KI4 A;  1FZ3 E;  4DTP A;  3TAE A;  4X5M A;  3KD1 E;  3QER A;  3UO2 A;  1Q9X A;  4KHQ A;  1XVG E;  2VJ4 A;  4FVM A;  4FJG A;  3RMC A;  4KHS A;  2VIX A;  1FZ0 E;  3C6P B; 
#chains in the Genus database with same CATH homology
 1XVC E;  2DEB A;  3C6N B;  4FJ9 A;  1FZ2 E;  4DTX A;  3LD8 A;  4JRQ A;  2FYO A;  4GAM C;  3KD5 E;  4FJK A;  4HCB A;  2B1E A;  4I9L A;  1P22 A;  3SVI A;  4FJ5 A;  4DTN A;  3QES A;  2P5G A;  2FW3 A;  2MZW B;  4RG8 A;  5IRE A;  5H37 A;  1MHY G;  3E4Y A;  1IH7 A;  3S9H A;  3L1N A;  3RWU A;  1XVE E;  4FK0 A;  4M3U A;  3HGL A;  4ADN A;  1MHZ G;  3SI6 A;  4AI6 A;  4QNC A;  4FJH A;  2OVP B;  3QEX A;  2JH8 A;  3C94 A;  1MTY G;  3LZJ A;  3SUO A;  1FS1 A;  3OGK B;  3TAF A;  3QNO A;  2E32 A;  3SUN A;  2MMB A;  3N1B A;  3SUQ A;  3SJJ A;  3K2O A;  4M42 A;  4J2B A;  5IZ7 A;  3NCI A;  1XVD E;  3TAB A;  1MMO G;  1FZ1 E;  1XMH E;  4DU4 A;  4DTR A;  3QNN A;  3CFP A;  4M3W A;  1FZ4 E;  4JS4 A;  2DY4 A;  2OZS A;  2P1O B;  3L2O B;  3SPY A;  2OYQ A;  3QEV A;  2HD0 A;  4FJJ A;  4KHN A;  1XMG E;  1XMF E;  4DTO A;  1XU3 E;  3C95 A;  4EP9 A;  4X5N A;  4DTU A;  2P1Q B;  4M3T A;  3CFO A;  1FZH E;  3L8B A;  2OVR B;  1Q9Y A;  4KHU A;  3LDB A;  3HL8 A;  1FZI E;  3CFR A;  1XVF E;  2PFV A;  4E3S A;  3SUP A;  3CQ8 A;  4KHW A;  2B8I A;  2JH9 A;  4M41 A;  4B08 A;  1FZ5 E;  4DTS A;  2LF6 A;  2OVQ B;  2P1P B;  4JRP A;  3QEW A;  4I6J B;  4DU3 A;  3SQ0 A;  3L0M A;  4DTJ A;  4FJX A;  2YB5 A;  3RMB A;  4HCC A;  4AKG A;  3QEP A;  4DU1 A;  4I9Q A;  3WSO A;  4DTM A;  3TAG A;  4FK2 A;  4FJI A;  1XU5 E;  4AKI A;  2P5O A;  2OZM A;  4AKH A;  1CLQ A;  2P1M B;  4J2A A;  4RL5 A;  2LF3 A;  4FJN A;  1FZ8 E;  2VJ5 A;  1IG9 A;  3MKS B;  3TL8 B;  4FJM A;  1WAF A;  4FK4 A;  3SPZ A;  5IBK B;  2ATQ A;  3HGK E;  2JHA A;  3OGM B;  4EYW A;  3V7D B;  3NDK A;  2JHC A;  3QET A;  2B7M A;  3J27 A;  4M45 A;  2DTU A;  1FYZ E;  3NAE A;  4RNG A;  3RMA A;  1XL3 C;  4QND A;  1FZ6 E;  1WAJ A;  3C6O B;  4ADO A;  4J2E A;  4KI6 A;  1NEX B;  1FZ7 E;  3LDS A;  3SNN A;  1LDK E;  3TJY A;  4M3X A;  4KHY A;  4E4B A;  2JHP A;  3SQ4 A;  3OGL B;  3NGI A;  4FJL A;  3HP9 A;  3NE6 A;  2PFT A;  2P1N B;  3SQ1 A;  4JS5 A;  3SCX A;  4FJ7 A;  3N1E A;  3NHG A;  1FZ9 E;  3UIQ A;  2H4T A;  2E31 A;  2RCU A;  4FJ8 A;  3E4W A;  3SQ2 A;  4M3Z A;  3RMD A;  4J2D A;  1XVB E;  3J2P A;  3LZI A;  2JPN A;  2QXF A;  4M3Y A;  4M3R A;  3QEI A;  4EPH A;  1FXX A;  4KI4 A;  1FZ3 E;  4DTP A;  3TAE A;  4X5M A;  3KD1 E;  3QER A;  1Q9X A;  4KHQ A;  1XVG E;  2VJ4 A;  4FVM A;  4FJG A;  3RMC A;  4KHS A;  2VIX A;  1FZ0 E;  3C6P B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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