3U35A

Crystal structure of the general stress fmn/fad binding protein from the phytopathogen xanthomonas citri
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
142
structure length
142
Chain Sequence
TKELQEKFWKALKSDRTVMLGLDGVEDGHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAMVDRLWNPYVAAWYEGGKTDPNLALLRLDADHAQIWLNESSLLAGIKVLLG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The structure of a Xanthomonas general stress protein involved in citrus canker reveals its flavin-binding property.
pubmed doi rcsb
molecule tags Protein binding
source organism Xanthomonas axonopodis pv. citri
molecule keywords General stress protein
total genus 35
structure length 142
sequence length 142
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2011-10-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF16242 Pyrid_ox_like Pyridoxamine 5'-phosphate oxidase like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 3u35A00
3AWHA 1NRGA 4Z85A 2HQ9A 2I51A 3DMBA 1W9AA 3KYFA 3ZOCA 3DNHA 2E83A 1G79A 1RFEA 3A6RA 1W3QA 2HQ7A 1FLMA 1Y30A 4XHYA 3AMFA 2QEAA 2FHQA 3GASA 1RZ1A 2R6VA 4F07A 4QVBA 2IG6A 1I0SA 4HMUA 3SWJA 2FG9A 4XJ2A 4HMXA 1G77A 4IRAA 2R0XA 2X1JA 1YLNA 2RDEA 1YOAA 3NFWA 1USCA 3BA3A 5CHOA 3A20A 1XHNA 4Y9IA 3VY5A 3FKHA 1USFA 1T9MA 3FGEA 3CP3A 2PTFA 4HMVA 4HMWA 1JNWA 4HMTA 3ZOEA 3CB0A 2ECUA 1EJEA 3ZOFA 3R5PA 3IN6A 3R5YA 3U5WA 2D38A 3A6QA 4R82A 3R5ZA 3VY2A 5JABA 5ESCA 1W3OA 5BNCA 1WGBA 4ZKYA 3BNKA 3EC6A 3VYAA 1W3RA 2HHZA 2OL5A 3U34A 3HMZA 2X1KA 1G78A 3U0IA 3ZODA 2QCKA 3K88A 2Q9KA 3BPKA 2ECRA 1G76A 3K87A 2HTDA 2VPAA 3R5WA 3HY8A 4YBNA 2D5MA 2A2JA 2ED4A 1VL7A 3KYGA 1CI0A 2IMLA 1WLIA 4N7RC 3F7EA 3PFTA 1W3PA 2HTIA 2I02A 2RE7A 1RZ0A 4YWNA 3DB0A 3R5LA 1AXJA 4HX6A 2D37A 2IABA 1I0RA 2OU5A 2ARZA 1DNLA 3U35A 1TY9A 3TGVA 3ZOHA 3K86A 3H96A 2FURA 1WV4A 1XXOA 1WLKA 2ASFA 2D36A 3RH7A 3B5MA 3ZOGA 2AQ6A 3E4VA 2GJGA 4HMSA 2NR4A 4L82A 3R5RA 5CHEC
chains in the Genus database with same CATH superfamily
3AWHA 1NRGA 4Z85A 2HQ9A 2I51A 3DMBA 2P5ZX 1W9AA 3KYFA 3ZOCA 3DNHA 4UHVA 2E83A 1G79A 1RFEA 3A6RA 1W3QA 2HQ7A 1FLMA 1Y30A 4XHYA 3AMFA 2QEAA 4MTKA 2FHQA 3GASA 1RZ1A 2R6VA 4F07A 4QVBA 2IG6A 4HKHA 2K4QA 4W64A 1I0SA 4HMUA 3SWJA 2FG9A 4XJ2A 4HMXA 1G77A 3HE1A 3V4HA 4IRAA 2R0XA 2X1JA 1YLNA 2RDEA 1YOAA 3NFWA 1USCA 3BA3A 5CHOA 3A20A 1XHNA 4Y9IA 3VY5A 3FKHA 1USFA 1T9MA 3FGEA 3CP3A 2PTFA 4HMVA 4HMWA 1JNWA 4HMTA 3ZOEA 3CB0A 2ECUA 1EJEA 3ZOFA 3R5PA 3IN6A 3R5YA 3U5WA 2D38A 3A6QA 4R82A 3R5ZA 3VY2A 5JABA 5ESCA 1W3OA 5BNCA 1WGBA 2L1TA 4ZKYA 3BNKA 3EC6A 3VYAA 1W3RA 2HHZA 2OL5A 3U34A 3HMZA 2X1KA 1G78A 3U0IA 3ZODA 2QCKA 3K88A 3EAAA 2Q9KA 3BPKA 2ECRA 1G76A 3K87A 2HTDA 1Y12A 2VPAA 3R5WA 4TV4A 3HY8A 4YBNA 2D5MA 2A2JA 2ED4A 1VL7A 3KYGA 1CI0A 2IMLA 1WLIA 4N7RC 3F7EA 3PFTA 1W3PA 2HTIA 2I02A 2RE7A 1RZ0A 4YWNA 3DB0A 3R5LA 1AXJA 4HX6A 2D37A 2IABA 1I0RA 2OU5A 2ARZA 1DNLA 3U35A 1TY9A 3TGVA 3ZOHA 3K86A 3H96A 2FURA 1WV4A 1XXOA 1WLKA 2ASFA 2D36A 3RH7A 3B5MA 3ZOGA 2GUJA 2AQ6A 3E4VA 2GJGA 4HMSA 2NR4A 4L82A 3R5RA 5CHEC
chains in the Genus database with same CATH topology
3AWHA 1NRGA 4Z85A 2HQ9A 2I51A 3DMBA 1W9AA 3KYFA 3ZOCA 3DNHA 2E83A 1G79A 1RFEA 3A6RA 1W3QA 2HQ7A 1FLMA 1Y30A 4XHYA 3AMFA 2QEAA 2FHQA 3GASA 1RZ1A 2R6VA 4F07A 4QVBA 2IG6A 1I0SA 4HMUA 3SWJA 2FG9A 4XJ2A 4HMXA 1G77A 4IRAA 2R0XA 2X1JA 1YLNA 2RDEA 1YOAA 3NFWA 1USCA 3BA3A 5CHOA 3A20A 1XHNA 4Y9IA 3VY5A 3FKHA 1USFA 1T9MA 3FGEA 3CP3A 2PTFA 4HMVA 4HMWA 1JNWA 4HMTA 3ZOEA 3CB0A 2ECUA 1EJEA 3ZOFA 3R5PA 3IN6A 3R5YA 3U5WA 2D38A 3A6QA 4R82A 3R5ZA 3VY2A 5JABA 5ESCA 1W3OA 5BNCA 1WGBA 4ZKYA 3BNKA 3EC6A 3VYAA 1W3RA 2HHZA 2OL5A 3U34A 3HMZA 2X1KA 1G78A 3U0IA 3ZODA 2QCKA 3K88A 2Q9KA 3BPKA 2ECRA 1G76A 3K87A 2HTDA 2VPAA 3R5WA 3HY8A 4YBNA 2D5MA 2A2JA 2ED4A 1VL7A 3KYGA 1CI0A 2IMLA 1WLIA 4N7RC 3F7EA 3PFTA 1W3PA 2HTIA 2I02A 2RE7A 1RZ0A 4YWNA 3DB0A 3R5LA 1AXJA 4HX6A 2D37A 2IABA 1I0RA 2OU5A 2ARZA 1DNLA 3U35A 1TY9A 3TGVA 3ZOHA 3K86A 3H96A 2FURA 1WV4A 1XXOA 1WLKA 2ASFA 2D36A 3RH7A 3B5MA 3ZOGA 2AQ6A 3E4VA 2GJGA 4HMSA 2NR4A 4L82A 3R5RA 5CHEC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3AWH A;  1NRG A;  4Z85 A;  2HQ9 A;  2I51 A;  3DMB A;  1W9A A;  3KYF A;  3ZOC A;  3DNH A;  2E83 A;  1G79 A;  1RFE A;  3A6R A;  1W3Q A;  2HQ7 A;  1FLM A;  1Y30 A;  4XHY A;  3AMF A;  2QEA A;  2FHQ A;  3GAS A;  1RZ1 A;  2R6V A;  4F07 A;  4QVB A;  2IG6 A;  1I0S A;  4HMU A;  3SWJ A;  2FG9 A;  4XJ2 A;  4HMX A;  1G77 A;  4IRA A;  2R0X A;  2X1J A;  1YLN A;  2RDE A;  1YOA A;  3NFW A;  1USC A;  3BA3 A;  5CHO A;  3A20 A;  1XHN A;  4Y9I A;  3VY5 A;  3FKH A;  1USF A;  1T9M A;  3FGE A;  3CP3 A;  2PTF A;  4HMV A;  4HMW A;  1JNW A;  4HMT A;  3ZOE A;  3CB0 A;  2ECU A;  1EJE A;  3ZOF A;  3R5P A;  3IN6 A;  3R5Y A;  3U5W A;  2D38 A;  3A6Q A;  4R82 A;  3R5Z A;  3VY2 A;  5JAB A;  5ESC A;  1W3O A;  5BNC A;  1WGB A;  4ZKY A;  3BNK A;  3EC6 A;  3VYA A;  1W3R A;  2HHZ A;  2OL5 A;  3U34 A;  3HMZ A;  2X1K A;  1G78 A;  3U0I A;  3ZOD A;  2QCK A;  3K88 A;  2Q9K A;  3BPK A;  2ECR A;  1G76 A;  3K87 A;  2HTD A;  2VPA A;  3R5W A;  3HY8 A;  4YBN A;  2D5M A;  2A2J A;  2ED4 A;  1VL7 A;  3KYG A;  1CI0 A;  2IML A;  1WLI A;  4N7R C;  3F7E A;  3PFT A;  1W3P A;  2HTI A;  2I02 A;  2RE7 A;  1RZ0 A;  4YWN A;  3DB0 A;  3R5L A;  1AXJ A;  4HX6 A;  2D37 A;  2IAB A;  1I0R A;  2OU5 A;  2ARZ A;  1DNL A;  3U35 A;  1TY9 A;  3TGV A;  3ZOH A;  3K86 A;  3H96 A;  2FUR A;  1WV4 A;  1XXO A;  1WLK A;  2ASF A;  2D36 A;  3RH7 A;  3B5M A;  3ZOG A;  2AQ6 A;  3E4V A;  2GJG A;  4HMS A;  2NR4 A;  4L82 A;  3R5R A;  5CHE C; 
#chains in the Genus database with same CATH topology
 3AWH A;  1NRG A;  4Z85 A;  2HQ9 A;  2I51 A;  3DMB A;  2P5Z X;  1W9A A;  3KYF A;  3ZOC A;  3DNH A;  4UHV A;  2E83 A;  1G79 A;  1RFE A;  3A6R A;  1W3Q A;  2HQ7 A;  1FLM A;  1Y30 A;  4XHY A;  3AMF A;  2QEA A;  4MTK A;  2FHQ A;  3GAS A;  1RZ1 A;  2R6V A;  4F07 A;  4QVB A;  2IG6 A;  4HKH A;  2K4Q A;  4W64 A;  1I0S A;  4HMU A;  3SWJ A;  2FG9 A;  4XJ2 A;  4HMX A;  1G77 A;  3HE1 A;  3V4H A;  4IRA A;  2R0X A;  2X1J A;  1YLN A;  2RDE A;  1YOA A;  3NFW A;  1USC A;  3BA3 A;  5CHO A;  3A20 A;  1XHN A;  4Y9I A;  3VY5 A;  3FKH A;  1USF A;  1T9M A;  3FGE A;  3CP3 A;  2PTF A;  4HMV A;  4HMW A;  1JNW A;  4HMT A;  3ZOE A;  3CB0 A;  2ECU A;  1EJE A;  3ZOF A;  3R5P A;  3IN6 A;  3R5Y A;  3U5W A;  2D38 A;  3A6Q A;  4R82 A;  3R5Z A;  3VY2 A;  5JAB A;  5ESC A;  1W3O A;  5BNC A;  1WGB A;  2L1T A;  4ZKY A;  3BNK A;  3EC6 A;  3VYA A;  1W3R A;  2HHZ A;  2OL5 A;  3U34 A;  3HMZ A;  2X1K A;  1G78 A;  3U0I A;  3ZOD A;  2QCK A;  3K88 A;  3EAA A;  2Q9K A;  3BPK A;  2ECR A;  1G76 A;  3K87 A;  2HTD A;  1Y12 A;  2VPA A;  3R5W A;  4TV4 A;  3HY8 A;  4YBN A;  2D5M A;  2A2J A;  2ED4 A;  1VL7 A;  3KYG A;  1CI0 A;  2IML A;  1WLI A;  4N7R C;  3F7E A;  3PFT A;  1W3P A;  2HTI A;  2I02 A;  2RE7 A;  1RZ0 A;  4YWN A;  3DB0 A;  3R5L A;  1AXJ A;  4HX6 A;  2D37 A;  2IAB A;  1I0R A;  2OU5 A;  2ARZ A;  1DNL A;  3U35 A;  1TY9 A;  3TGV A;  3ZOH A;  3K86 A;  3H96 A;  2FUR A;  1WV4 A;  1XXO A;  1WLK A;  2ASF A;  2D36 A;  3RH7 A;  3B5M A;  3ZOG A;  2GUJ A;  2AQ6 A;  3E4V A;  2GJG A;  4HMS A;  2NR4 A;  4L82 A;  3R5R A;  5CHE C; 
#chains in the Genus database with same CATH homology
 3AWH A;  1NRG A;  4Z85 A;  2HQ9 A;  2I51 A;  3DMB A;  1W9A A;  3KYF A;  3ZOC A;  3DNH A;  2E83 A;  1G79 A;  1RFE A;  3A6R A;  1W3Q A;  2HQ7 A;  1FLM A;  1Y30 A;  4XHY A;  3AMF A;  2QEA A;  2FHQ A;  3GAS A;  1RZ1 A;  2R6V A;  4F07 A;  4QVB A;  2IG6 A;  1I0S A;  4HMU A;  3SWJ A;  2FG9 A;  4XJ2 A;  4HMX A;  1G77 A;  4IRA A;  2R0X A;  2X1J A;  1YLN A;  2RDE A;  1YOA A;  3NFW A;  1USC A;  3BA3 A;  5CHO A;  3A20 A;  1XHN A;  4Y9I A;  3VY5 A;  3FKH A;  1USF A;  1T9M A;  3FGE A;  3CP3 A;  2PTF A;  4HMV A;  4HMW A;  1JNW A;  4HMT A;  3ZOE A;  3CB0 A;  2ECU A;  1EJE A;  3ZOF A;  3R5P A;  3IN6 A;  3R5Y A;  3U5W A;  2D38 A;  3A6Q A;  4R82 A;  3R5Z A;  3VY2 A;  5JAB A;  5ESC A;  1W3O A;  5BNC A;  1WGB A;  4ZKY A;  3BNK A;  3EC6 A;  3VYA A;  1W3R A;  2HHZ A;  2OL5 A;  3U34 A;  3HMZ A;  2X1K A;  1G78 A;  3U0I A;  3ZOD A;  2QCK A;  3K88 A;  2Q9K A;  3BPK A;  2ECR A;  1G76 A;  3K87 A;  2HTD A;  2VPA A;  3R5W A;  3HY8 A;  4YBN A;  2D5M A;  2A2J A;  2ED4 A;  1VL7 A;  3KYG A;  1CI0 A;  2IML A;  1WLI A;  4N7R C;  3F7E A;  3PFT A;  1W3P A;  2HTI A;  2I02 A;  2RE7 A;  1RZ0 A;  4YWN A;  3DB0 A;  3R5L A;  1AXJ A;  4HX6 A;  2D37 A;  2IAB A;  1I0R A;  2OU5 A;  2ARZ A;  1DNL A;  3U35 A;  1TY9 A;  3TGV A;  3ZOH A;  3K86 A;  3H96 A;  2FUR A;  1WV4 A;  1XXO A;  1WLK A;  2ASF A;  2D36 A;  3RH7 A;  3B5M A;  3ZOG A;  2AQ6 A;  3E4V A;  2GJG A;  4HMS A;  2NR4 A;  4L82 A;  3R5R A;  5CHE C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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