3U74U

Crystal structure of stabilized human upar mutant
Total Genus 69
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
283
structure length
263
Chain Sequence
b'LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTCSEKTNRTLSYRTGLKITSLTEVVCGLDLCNQGNRYLECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGPILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFSMCHIDVSCCTKSGCNHPDLDVQYRSG'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Crystal structure of the urokinase receptor in a ligand-free form.
pubmed doi rcsb
molecule keywords Urokinase plasminogen activator surface receptor
source organism Homo sapiens
molecule tags Hydrolase receptor
total genus 69
structure length 263
sequence length 283
ec nomenclature
pdb deposition date 2011-10-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
U PF00021 UPAR_LY6 u-PAR/Ly-6 domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 3u74U01
2.10.60.10 Mainly Beta Ribbon CD59 CD59 3u74U03
2.10.60.10 Mainly Beta Ribbon CD59 CD59 3u74U02
1FF4A 1ERAA 1CXNA 2MUPA 4AEAA 4RUDA 1BXPA 1QM7A 1IDIA 1VB0A 1RL5A 4BIKB 2CDXA 1FASA 2ERAA 2LCRA 1CRFA 2HLRA 1I02A 1ERGA 2GOOB 2QJBC 5DO6A 1TXAA 1JGKA 1DRSA 4XJJA 2ABXA 1KBSA 4ZQYA 1V6PA 2H64B 2VLWA 1RGJA 1JBDA 2FD6U 2BHIA 3EBXA 1CXOA 2H8UA 1UG4A 1HC9A 4HQPF 1IDHA 3FEVA 5DZ5A 1MAHF 5EBXA 1TGXA 1L4WA 1LJZA 1JE9A 1CREA 6EBXA 2QC1A 1CB9A 2CCXA 1IK8A 1CDSA 1COEA 1KTZB 3BT2U 3PLCA 2CRTA 1ONJA 1YWHA 2CTXA 1F94A 2I9BE 2N99A 3NEQA 1QKEA 3BT1U 2MJYA 2UX2A 3U74U 1IDGA 2JVEA 2MHYA 2BTXA 1NYUA 2MFAA 5DU1A 1BTEA 2NBTA 2PJYB 4FAOE 4OM5A 1LXGA 3NDSA 1KL8A 1CDRA 4LFTA 1FSSB 1CDQA 1NYSA 2UWRA 1FSCA 1H0JA 2H5FA 3LAQU 1G6MA 2OFSA 1LSIA 1IJCA 1PLOA 3VTSA 1LXHA 1ABTA 1IKCA 4IYEA 1CHVS 2CRSA 1CTXA 2GOOC 2H7ZB 1HOYA 5IMYC 2L5SA 1S4YA 1B41B 1FFJA 1KBAA 2JQPA 1IDLA 1HAJA 1CCQA 2J8BA 1M9ZA 1KBTA 1NEAA 1LX5B 2QJAC 1F8UB 1QKDA 2MUOA 2X8BB 1ZADA 2HLQA 1TXBA 2MJ0A 2QJ9C 1CVOA 1KC4A 2LA1A 1IQ9A 1REWC 2H7ZA 1HAAA 1W6BA 2H62D 1CDTA 3HH7A 4FAOC 1ES7B 3NH7A 4DO8A 1KFHA 2L03A 3U73U 4UY2C 3KFDE 1NTNA 2MJ4A 1HC9B 4QTIU 1TFSA 5IMTD 3QB4B 1NORA 1CODA 1MR6A 3EVSC 1KS6A 4P7UA 2K3GA 3ERAA 1KU6B 1XT3A 1NXBA 4OM4A 1KXIA 1NTXA 4BDTB 1FRAA 2H64C 2PJYC 4EY8B 2H62C 3KFDI
chains in the Genus database with same CATH superfamily
1FF4A 1ERAA 1CXNA 2MUPA 4AEAA 4RUDA 1BXPA 1QM7A 1IDIA 1VB0A 1RL5A 4BIKB 2CDXA 1FASA 2ERAA 2LCRA 1CRFA 2HLRA 1I02A 1ERGA 2GOOB 2QJBC 5DO6A 1TXAA 1JGKA 1DRSA 4XJJA 2ABXA 1KBSA 4ZQYA 1V6PA 2H64B 2VLWA 1RGJA 1JBDA 2FD6U 2BHIA 3EBXA 1CXOA 2H8UA 1UG4A 1HC9A 4HQPF 1IDHA 3FEVA 5DZ5A 1MAHF 5EBXA 1TGXA 1L4WA 1LJZA 1JE9A 1CREA 6EBXA 2QC1A 1CB9A 2CCXA 1IK8A 1CDSA 1COEA 1KTZB 3BT2U 3PLCA 2CRTA 1ONJA 1YWHA 2CTXA 1F94A 2I9BE 2N99A 3NEQA 1QKEA 3BT1U 2MJYA 2UX2A 3U74U 1IDGA 2JVEA 2MHYA 2BTXA 1NYUA 2MFAA 5DU1A 1BTEA 2NBTA 2PJYB 4FAOE 4OM5A 1LXGA 3NDSA 1KL8A 1CDRA 4LFTA 1FSSB 1CDQA 1NYSA 2UWRA 1FSCA 1H0JA 2H5FA 3LAQU 1G6MA 2OFSA 1LSIA 1IJCA 1PLOA 3VTSA 1LXHA 1ABTA 1IKCA 4IYEA 1CHVS 2CRSA 1CTXA 2GOOC 2H7ZB 1HOYA 5IMYC 2L5SA 1S4YA 1B41B 1FFJA 1KBAA 2JQPA 1IDLA 1HAJA 1CCQA 2J8BA 4KSNA 1M9ZA 1KBTA 1NEAA 1LX5B 2QJAC 1F8UB 1QKDA 2MUOA 2X8BB 1ZADA 2HLQA 1TXBA 2MJ0A 2QJ9C 1CVOA 1KC4A 2LA1A 1IQ9A 1REWC 2H7ZA 1HAAA 1W6BA 2H62D 1CDTA 3HH7A 4FAOC 1ES7B 3NH7A 4DO8A 1KFHA 2L03A 3U73U 4UY2C 3KFDE 1NTNA 2MJ4A 1HC9B 4QTIU 1TFSA 5IMTD 3QB4B 1NORA 1CODA 1MR6A 3EVSC 1KS6A 4P7UA 2K3GA 3ERAA 1KU6B 1XT3A 1NXBA 4OM4A 1KXIA 1NTXA 4BDTB 1FRAA 2H64C 2PJYC 4EY8B 2H62C 3KFDI
chains in the Genus database with same CATH topology
1FF4A 1ERAA 1CXNA 2MUPA 4AEAA 4RUDA 1BXPA 1QM7A 1IDIA 1VB0A 1RL5A 4BIKB 2CDXA 1FASA 2ERAA 2LCRA 1CRFA 2HLRA 1I02A 1ERGA 2GOOB 2QJBC 5DO6A 1TXAA 1JGKA 1DRSA 4XJJA 2ABXA 1KBSA 4ZQYA 1V6PA 2H64B 2VLWA 1RGJA 1JBDA 2FD6U 2BHIA 3EBXA 1CXOA 2H8UA 1UG4A 1HC9A 4HQPF 1IDHA 3FEVA 5DZ5A 1MAHF 5EBXA 1TGXA 1L4WA 1LJZA 1JE9A 1CREA 6EBXA 2QC1A 1CB9A 2CCXA 1IK8A 1CDSA 1COEA 1KTZB 3BT2U 3PLCA 2CRTA 1ONJA 1YWHA 2CTXA 1F94A 2I9BE 2N99A 3NEQA 1QKEA 3BT1U 2MJYA 2UX2A 3U74U 1IDGA 2JVEA 2MHYA 2BTXA 1NYUA 2MFAA 5DU1A 1BTEA 2NBTA 2PJYB 4FAOE 4OM5A 1LXGA 3NDSA 1KL8A 1CDRA 4LFTA 1FSSB 1CDQA 1NYSA 2UWRA 1FSCA 1H0JA 2H5FA 3LAQU 1G6MA 2OFSA 1LSIA 1IJCA 1PLOA 3VTSA 1LXHA 1ABTA 1IKCA 4IYEA 1CHVS 2CRSA 1CTXA 2GOOC 2H7ZB 1HOYA 5IMYC 2L5SA 1S4YA 1B41B 1FFJA 1KBAA 2JQPA 1IDLA 1HAJA 1CCQA 2J8BA 4KSNA 1M9ZA 1KBTA 1NEAA 1LX5B 2QJAC 1F8UB 1QKDA 2MUOA 2X8BB 1ZADA 2HLQA 1TXBA 2MJ0A 2QJ9C 1CVOA 1KC4A 2LA1A 1IQ9A 1REWC 2H7ZA 1HAAA 1W6BA 2H62D 1CDTA 3HH7A 4FAOC 1ES7B 3NH7A 4DO8A 1KFHA 2L03A 3U73U 4UY2C 3KFDE 1NTNA 2MJ4A 1HC9B 4QTIU 1TFSA 5IMTD 3QB4B 1NORA 1CODA 1MR6A 3EVSC 1KS6A 4P7UA 2K3GA 3ERAA 1KU6B 1XT3A 1NXBA 4OM4A 1KXIA 1NTXA 4BDTB 1FRAA 2H64C 2PJYC 4EY8B 2H62C 3KFDI
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1FF4 A;  1ERA A;  1CXN A;  2MUP A;  4AEA A;  4RUD A;  1BXP A;  1QM7 A;  1IDI A;  1VB0 A;  1RL5 A;  4BIK B;  2CDX A;  1FAS A;  2ERA A;  2LCR A;  1CRF A;  2HLR A;  1I02 A;  1ERG A;  2GOO B;  2QJB C;  5DO6 A;  1TXA A;  1JGK A;  1DRS A;  4XJJ A;  2ABX A;  1KBS A;  4ZQY A;  1V6P A;  2H64 B;  2VLW A;  1RGJ A;  1JBD A;  2FD6 U;  2BHI A;  3EBX A;  1CXO A;  2H8U A;  1UG4 A;  1HC9 A;  4HQP F;  1IDH A;  3FEV A;  5DZ5 A;  1MAH F;  5EBX A;  1TGX A;  1L4W A;  1LJZ A;  1JE9 A;  1CRE A;  6EBX A;  2QC1 A;  1CB9 A;  2CCX A;  1IK8 A;  1CDS A;  1COE A;  1KTZ B;  3BT2 U;  3PLC A;  2CRT A;  1ONJ A;  1YWH A;  2CTX A;  1F94 A;  2I9B E;  2N99 A;  3NEQ A;  1QKE A;  3BT1 U;  2MJY A;  2UX2 A;  3U74 U;  1IDG A;  2JVE A;  2MHY A;  2BTX A;  1NYU A;  2MFA A;  5DU1 A;  1BTE A;  2NBT A;  2PJY B;  4FAO E;  4OM5 A;  1LXG A;  3NDS A;  1KL8 A;  1CDR A;  4LFT A;  1FSS B;  1CDQ A;  1NYS A;  2UWR A;  1FSC A;  1H0J A;  2H5F A;  3LAQ U;  1G6M A;  2OFS A;  1LSI A;  1IJC A;  1PLO A;  3VTS A;  1LXH A;  1ABT A;  1IKC A;  4IYE A;  1CHV S;  2CRS A;  1CTX A;  2GOO C;  2H7Z B;  1HOY A;  5IMY C;  2L5S A;  1S4Y A;  1B41 B;  1FFJ A;  1KBA A;  2JQP A;  1IDL A;  1HAJ A;  1CCQ A;  2J8B A;  1M9Z A;  1KBT A;  1NEA A;  1LX5 B;  2QJA C;  1F8U B;  1QKD A;  2MUO A;  2X8B B;  1ZAD A;  2HLQ A;  1TXB A;  2MJ0 A;  2QJ9 C;  1CVO A;  1KC4 A;  2LA1 A;  1IQ9 A;  1REW C;  2H7Z A;  1HAA A;  1W6B A;  2H62 D;  1CDT A;  3HH7 A;  4FAO C;  1ES7 B;  3NH7 A;  4DO8 A;  1KFH A;  2L03 A;  3U73 U;  4UY2 C;  3KFD E;  1NTN A;  2MJ4 A;  1HC9 B;  4QTI U;  1TFS A;  5IMT D;  3QB4 B;  1NOR A;  1COD A;  1MR6 A;  3EVS C;  1KS6 A;  4P7U A;  2K3G A;  3ERA A;  1KU6 B;  1XT3 A;  1NXB A;  4OM4 A;  1KXI A;  1NTX A;  4BDT B;  1FRA A;  2H64 C;  2PJY C;  4EY8 B;  2H62 C;  3KFD I; 
#chains in the Genus database with same CATH topology
 1FF4 A;  1ERA A;  1CXN A;  2MUP A;  4AEA A;  4RUD A;  1BXP A;  1QM7 A;  1IDI A;  1VB0 A;  1RL5 A;  4BIK B;  2CDX A;  1FAS A;  2ERA A;  2LCR A;  1CRF A;  2HLR A;  1I02 A;  1ERG A;  2GOO B;  2QJB C;  5DO6 A;  1TXA A;  1JGK A;  1DRS A;  4XJJ A;  2ABX A;  1KBS A;  4ZQY A;  1V6P A;  2H64 B;  2VLW A;  1RGJ A;  1JBD A;  2FD6 U;  2BHI A;  3EBX A;  1CXO A;  2H8U A;  1UG4 A;  1HC9 A;  4HQP F;  1IDH A;  3FEV A;  5DZ5 A;  1MAH F;  5EBX A;  1TGX A;  1L4W A;  1LJZ A;  1JE9 A;  1CRE A;  6EBX A;  2QC1 A;  1CB9 A;  2CCX A;  1IK8 A;  1CDS A;  1COE A;  1KTZ B;  3BT2 U;  3PLC A;  2CRT A;  1ONJ A;  1YWH A;  2CTX A;  1F94 A;  2I9B E;  2N99 A;  3NEQ A;  1QKE A;  3BT1 U;  2MJY A;  2UX2 A;  3U74 U;  1IDG A;  2JVE A;  2MHY A;  2BTX A;  1NYU A;  2MFA A;  5DU1 A;  1BTE A;  2NBT A;  2PJY B;  4FAO E;  4OM5 A;  1LXG A;  3NDS A;  1KL8 A;  1CDR A;  4LFT A;  1FSS B;  1CDQ A;  1NYS A;  2UWR A;  1FSC A;  1H0J A;  2H5F A;  3LAQ U;  1G6M A;  2OFS A;  1LSI A;  1IJC A;  1PLO A;  3VTS A;  1LXH A;  1ABT A;  1IKC A;  4IYE A;  1CHV S;  2CRS A;  1CTX A;  2GOO C;  2H7Z B;  1HOY A;  5IMY C;  2L5S A;  1S4Y A;  1B41 B;  1FFJ A;  1KBA A;  2JQP A;  1IDL A;  1HAJ A;  1CCQ A;  2J8B A;  4KSN A;  1M9Z A;  1KBT A;  1NEA A;  1LX5 B;  2QJA C;  1F8U B;  1QKD A;  2MUO A;  2X8B B;  1ZAD A;  2HLQ A;  1TXB A;  2MJ0 A;  2QJ9 C;  1CVO A;  1KC4 A;  2LA1 A;  1IQ9 A;  1REW C;  2H7Z A;  1HAA A;  1W6B A;  2H62 D;  1CDT A;  3HH7 A;  4FAO C;  1ES7 B;  3NH7 A;  4DO8 A;  1KFH A;  2L03 A;  3U73 U;  4UY2 C;  3KFD E;  1NTN A;  2MJ4 A;  1HC9 B;  4QTI U;  1TFS A;  5IMT D;  3QB4 B;  1NOR A;  1COD A;  1MR6 A;  3EVS C;  1KS6 A;  4P7U A;  2K3G A;  3ERA A;  1KU6 B;  1XT3 A;  1NXB A;  4OM4 A;  1KXI A;  1NTX A;  4BDT B;  1FRA A;  2H64 C;  2PJY C;  4EY8 B;  2H62 C;  3KFD I; 
#chains in the Genus database with same CATH homology
 1FF4 A;  1ERA A;  1CXN A;  2MUP A;  4AEA A;  4RUD A;  1BXP A;  1QM7 A;  1IDI A;  1VB0 A;  1RL5 A;  4BIK B;  2CDX A;  1FAS A;  2ERA A;  2LCR A;  1CRF A;  2HLR A;  1I02 A;  1ERG A;  2GOO B;  2QJB C;  5DO6 A;  1TXA A;  1JGK A;  1DRS A;  4XJJ A;  2ABX A;  1KBS A;  4ZQY A;  1V6P A;  2H64 B;  2VLW A;  1RGJ A;  1JBD A;  2FD6 U;  2BHI A;  3EBX A;  1CXO A;  2H8U A;  1UG4 A;  1HC9 A;  4HQP F;  1IDH A;  3FEV A;  5DZ5 A;  1MAH F;  5EBX A;  1TGX A;  1L4W A;  1LJZ A;  1JE9 A;  1CRE A;  6EBX A;  2QC1 A;  1CB9 A;  2CCX A;  1IK8 A;  1CDS A;  1COE A;  1KTZ B;  3BT2 U;  3PLC A;  2CRT A;  1ONJ A;  1YWH A;  2CTX A;  1F94 A;  2I9B E;  2N99 A;  3NEQ A;  1QKE A;  3BT1 U;  2MJY A;  2UX2 A;  3U74 U;  1IDG A;  2JVE A;  2MHY A;  2BTX A;  1NYU A;  2MFA A;  5DU1 A;  1BTE A;  2NBT A;  2PJY B;  4FAO E;  4OM5 A;  1LXG A;  3NDS A;  1KL8 A;  1CDR A;  4LFT A;  1FSS B;  1CDQ A;  1NYS A;  2UWR A;  1FSC A;  1H0J A;  2H5F A;  3LAQ U;  1G6M A;  2OFS A;  1LSI A;  1IJC A;  1PLO A;  3VTS A;  1LXH A;  1ABT A;  1IKC A;  4IYE A;  1CHV S;  2CRS A;  1CTX A;  2GOO C;  2H7Z B;  1HOY A;  5IMY C;  2L5S A;  1S4Y A;  1B41 B;  1FFJ A;  1KBA A;  2JQP A;  1IDL A;  1HAJ A;  1CCQ A;  2J8B A;  4KSN A;  1M9Z A;  1KBT A;  1NEA A;  1LX5 B;  2QJA C;  1F8U B;  1QKD A;  2MUO A;  2X8B B;  1ZAD A;  2HLQ A;  1TXB A;  2MJ0 A;  2QJ9 C;  1CVO A;  1KC4 A;  2LA1 A;  1IQ9 A;  1REW C;  2H7Z A;  1HAA A;  1W6B A;  2H62 D;  1CDT A;  3HH7 A;  4FAO C;  1ES7 B;  3NH7 A;  4DO8 A;  1KFH A;  2L03 A;  3U73 U;  4UY2 C;  3KFD E;  1NTN A;  2MJ4 A;  1HC9 B;  4QTI U;  1TFS A;  5IMT D;  3QB4 B;  1NOR A;  1COD A;  1MR6 A;  3EVS C;  1KS6 A;  4P7U A;  2K3G A;  3ERA A;  1KU6 B;  1XT3 A;  1NXB A;  4OM4 A;  1KXI A;  1NTX A;  4BDT B;  1FRA A;  2H64 C;  2PJY C;  4EY8 B;  2H62 C;  3KFD I; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...