3UEDA

Crystal structure of human survivin bound to histone h3 phosphorylated on threonine-3 (c2 space group).
Total Genus 47
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
47
sequence length
137
structure length
137
Chain Sequence
TLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAAM
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Cell cycle
molecule keywords Baculoviral IAP repeat-containing protein 5
publication title Molecular basis for phosphospecific recognition of histone H3 tails by Survivin paralogues at inner centromeres.
pubmed doi rcsb
source organism Homo sapiens
total genus 47
structure length 137
sequence length 137
chains with identical sequence C
ec nomenclature
pdb deposition date 2011-10-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00653 BIR Inhibitor of Apoptosis domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1170.10 Mainly Alpha Orthogonal Bundle Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A 3uedA00
3UIJA 1XOXA 5C7CA 3UIHA 3D9TA 2OPYA 3UEFA 4A0JA 3GT9A 1JD6A 1OXNA 3UW4A 2VSLA 3F7IA 3UIIA 4A0NA 3F7HA 4KMNA 1TW6A 2RAXA 4MTZA 3G76A 4HY4A 2I3IA 3T6PA 1F3HA 4EC4A 1QBHA 2UVLA 3OZ1A 3UIGA 4HY5A 3UW5A 3D9UA 4WVUA 2QFAA 3CM2A 1G73C 1JD5A 1NW9A 3GTAA 3M0DD 3MUPA 4J48A 1SE0A 5C0LA 1M4MA 4J3YA 4J46A 4LGEA 5C3HA 4WVTA 1I3OE 2POIA 1SDZA 4LGUA 4KJUA 1C9QA 3UEGA 1Q4QA 3CLXA 3EYLA 1TFQA 1XB0A 3M0AD 3M1DA 1XB1A 2QRAA 3F7GA 3UEIA 4KJVA 5C7DA 5C7AA 3CM7A 4KMPA 3UIKA 4J47A 2I3HA 2OPZA 1E31A 5C3KA 2VM5A 1JD4A 3UEHA 3HL5A 1OY7A 2JK7A 2POPB 4J44A 1G3FA 1OXQA 1TFTA 3SIPE 5C84A 4HY0A 3UECA 4A0IA 3SIQA 5C83A 4EB9A 4OXCA 5C7BA 3UEEA 4J45A 5C0KA 4MU7A 4MTIA 4WVSA 3UEDA 2RAWA 1F9XA
chains in the Genus database with same CATH superfamily
3UIJA 1XOXA 5C7CA 3UIHA 3D9TA 2OPYA 3UEFA 4A0JA 3GT9A 1JD6A 1OXNA 3UW4A 2VSLA 3F7IA 3UIIA 4A0NA 3F7HA 4KMNA 1TW6A 2RAXA 4MTZA 3G76A 4HY4A 2I3IA 3T6PA 1F3HA 4EC4A 1QBHA 2UVLA 3OZ1A 3UIGA 4HY5A 3UW5A 3D9UA 4WVUA 2QFAA 3CM2A 1G73C 1JD5A 1NW9A 3GTAA 3M0DD 3MUPA 4J48A 1SE0A 5C0LA 1M4MA 4J3YA 4J46A 4LGEA 5C3HA 4WVTA 1I3OE 2POIA 1SDZA 4LGUA 4KJUA 1C9QA 3UEGA 1Q4QA 3CLXA 3EYLA 1TFQA 1XB0A 3M0AD 3M1DA 1XB1A 2QRAA 3F7GA 3UEIA 4KJVA 5C7DA 5C7AA 3CM7A 4KMPA 3UIKA 4J47A 2I3HA 2OPZA 1E31A 5C3KA 2VM5A 1JD4A 3UEHA 3HL5A 1OY7A 2JK7A 2POPB 4J44A 1G3FA 1OXQA 1TFTA 3SIPE 5C84A 4HY0A 3UECA 4A0IA 3SIQA 5C83A 4EB9A 4OXCA 5C7BA 3UEEA 4J45A 5C0KA 4MU7A 4MTIA 4WVSA 3UEDA 2RAWA 1F9XA
chains in the Genus database with same CATH topology
3UIJA 1XOXA 5C7CA 3UIHA 3D9TA 2OPYA 3UEFA 4A0JA 3GT9A 1JD6A 1OXNA 3UW4A 2VSLA 3F7IA 3UIIA 4A0NA 3F7HA 4KMNA 1TW6A 2RAXA 4MTZA 3G76A 4HY4A 2I3IA 3T6PA 1F3HA 4EC4A 1QBHA 2UVLA 3OZ1A 3UIGA 4HY5A 3UW5A 3D9UA 4WVUA 2QFAA 3CM2A 1G73C 1JD5A 1NW9A 3GTAA 3M0DD 3MUPA 4J48A 1SE0A 5C0LA 1M4MA 4J3YA 4J46A 4LGEA 5C3HA 4WVTA 1I3OE 2POIA 1SDZA 4LGUA 4KJUA 1C9QA 3UEGA 1Q4QA 3CLXA 3EYLA 1TFQA 1XB0A 3M0AD 3M1DA 1XB1A 2QRAA 3F7GA 3UEIA 4KJVA 5C7DA 5C7AA 3CM7A 4KMPA 3UIKA 4J47A 2I3HA 2OPZA 1E31A 5C3KA 2VM5A 1JD4A 3UEHA 3HL5A 1OY7A 2JK7A 2POPB 4J44A 1G3FA 1OXQA 1TFTA 3SIPE 5C84A 4HY0A 3UECA 4A0IA 3SIQA 5C83A 4EB9A 4OXCA 5C7BA 3UEEA 4J45A 5C0KA 4MU7A 4MTIA 4WVSA 3UEDA 2RAWA 1F9XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3UIJ A;  1XOX A;  5C7C A;  3UIH A;  3D9T A;  2OPY A;  3UEF A;  4A0J A;  3GT9 A;  1JD6 A;  1OXN A;  3UW4 A;  2VSL A;  3F7I A;  3UII A;  4A0N A;  3F7H A;  4KMN A;  1TW6 A;  2RAX A;  4MTZ A;  3G76 A;  4HY4 A;  2I3I A;  3T6P A;  1F3H A;  4EC4 A;  1QBH A;  2UVL A;  3OZ1 A;  3UIG A;  4HY5 A;  3UW5 A;  3D9U A;  4WVU A;  2QFA A;  3CM2 A;  1G73 C;  1JD5 A;  1NW9 A;  3GTA A;  3M0D D;  3MUP A;  4J48 A;  1SE0 A;  5C0L A;  1M4M A;  4J3Y A;  4J46 A;  4LGE A;  5C3H A;  4WVT A;  1I3O E;  2POI A;  1SDZ A;  4LGU A;  4KJU A;  1C9Q A;  3UEG A;  1Q4Q A;  3CLX A;  3EYL A;  1TFQ A;  1XB0 A;  3M0A D;  3M1D A;  1XB1 A;  2QRA A;  3F7G A;  3UEI A;  4KJV A;  5C7D A;  5C7A A;  3CM7 A;  4KMP A;  3UIK A;  4J47 A;  2I3H A;  2OPZ A;  1E31 A;  5C3K A;  2VM5 A;  1JD4 A;  3UEH A;  3HL5 A;  1OY7 A;  2JK7 A;  2POP B;  4J44 A;  1G3F A;  1OXQ A;  1TFT A;  3SIP E;  5C84 A;  4HY0 A;  3UEC A;  4A0I A;  3SIQ A;  5C83 A;  4EB9 A;  4OXC A;  5C7B A;  3UEE A;  4J45 A;  5C0K A;  4MU7 A;  4MTI A;  4WVS A;  3UED A;  2RAW A;  1F9X A; 
#chains in the Genus database with same CATH topology
 3UIJ A;  1XOX A;  5C7C A;  3UIH A;  3D9T A;  2OPY A;  3UEF A;  4A0J A;  3GT9 A;  1JD6 A;  1OXN A;  3UW4 A;  2VSL A;  3F7I A;  3UII A;  4A0N A;  3F7H A;  4KMN A;  1TW6 A;  2RAX A;  4MTZ A;  3G76 A;  4HY4 A;  2I3I A;  3T6P A;  1F3H A;  4EC4 A;  1QBH A;  2UVL A;  3OZ1 A;  3UIG A;  4HY5 A;  3UW5 A;  3D9U A;  4WVU A;  2QFA A;  3CM2 A;  1G73 C;  1JD5 A;  1NW9 A;  3GTA A;  3M0D D;  3MUP A;  4J48 A;  1SE0 A;  5C0L A;  1M4M A;  4J3Y A;  4J46 A;  4LGE A;  5C3H A;  4WVT A;  1I3O E;  2POI A;  1SDZ A;  4LGU A;  4KJU A;  1C9Q A;  3UEG A;  1Q4Q A;  3CLX A;  3EYL A;  1TFQ A;  1XB0 A;  3M0A D;  3M1D A;  1XB1 A;  2QRA A;  3F7G A;  3UEI A;  4KJV A;  5C7D A;  5C7A A;  3CM7 A;  4KMP A;  3UIK A;  4J47 A;  2I3H A;  2OPZ A;  1E31 A;  5C3K A;  2VM5 A;  1JD4 A;  3UEH A;  3HL5 A;  1OY7 A;  2JK7 A;  2POP B;  4J44 A;  1G3F A;  1OXQ A;  1TFT A;  3SIP E;  5C84 A;  4HY0 A;  3UEC A;  4A0I A;  3SIQ A;  5C83 A;  4EB9 A;  4OXC A;  5C7B A;  3UEE A;  4J45 A;  5C0K A;  4MU7 A;  4MTI A;  4WVS A;  3UED A;  2RAW A;  1F9X A; 
#chains in the Genus database with same CATH homology
 3UIJ A;  1XOX A;  5C7C A;  3UIH A;  3D9T A;  2OPY A;  3UEF A;  4A0J A;  3GT9 A;  1JD6 A;  1OXN A;  3UW4 A;  2VSL A;  3F7I A;  3UII A;  4A0N A;  3F7H A;  4KMN A;  1TW6 A;  2RAX A;  4MTZ A;  3G76 A;  4HY4 A;  2I3I A;  3T6P A;  1F3H A;  4EC4 A;  1QBH A;  2UVL A;  3OZ1 A;  3UIG A;  4HY5 A;  3UW5 A;  3D9U A;  4WVU A;  2QFA A;  3CM2 A;  1G73 C;  1JD5 A;  1NW9 A;  3GTA A;  3M0D D;  3MUP A;  4J48 A;  1SE0 A;  5C0L A;  1M4M A;  4J3Y A;  4J46 A;  4LGE A;  5C3H A;  4WVT A;  1I3O E;  2POI A;  1SDZ A;  4LGU A;  4KJU A;  1C9Q A;  3UEG A;  1Q4Q A;  3CLX A;  3EYL A;  1TFQ A;  1XB0 A;  3M0A D;  3M1D A;  1XB1 A;  2QRA A;  3F7G A;  3UEI A;  4KJV A;  5C7D A;  5C7A A;  3CM7 A;  4KMP A;  3UIK A;  4J47 A;  2I3H A;  2OPZ A;  1E31 A;  5C3K A;  2VM5 A;  1JD4 A;  3UEH A;  3HL5 A;  1OY7 A;  2JK7 A;  2POP B;  4J44 A;  1G3F A;  1OXQ A;  1TFT A;  3SIP E;  5C84 A;  4HY0 A;  3UEC A;  4A0I A;  3SIQ A;  5C83 A;  4EB9 A;  4OXC A;  5C7B A;  3UEE A;  4J45 A;  5C0K A;  4MU7 A;  4MTI A;  4WVS A;  3UED A;  2RAW A;  1F9X A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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