3UEFA

Crystal structure of human survivin bound to histone h3 (c2 space group).
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
136
structure length
136
Chain Sequence
TLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Cell cycle
molecule keywords Baculoviral IAP repeat-containing protein 5
publication title Molecular basis for phosphospecific recognition of histone H3 tails by Survivin paralogues at inner centromeres.
pubmed doi rcsb
source organism Homo sapiens
total genus 48
structure length 136
sequence length 136
chains with identical sequence C
ec nomenclature
pdb deposition date 2011-10-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00653 BIR Inhibitor of Apoptosis domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1170.10 Mainly Alpha Orthogonal Bundle Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A 3uefA00
5C83A 1JD4A 5C7DA 3CLXA 3UEDA 5C0LA 2VM5A 1E31A 5C7AA 4J48A 3F7GA 3CM7A 4A0JA 4J3YA 3SIPE 3UEFA 5C7CA 1XB1A 2UVLA 3UEGA 3UIIA 3GTAA 1JD6A 4WVUA 3MUPA 3G76A 4EC4A 3UEIA 5C0KA 2JK7A 1SE0A 1C9QA 2OPZA 2OPYA 2I3IA 1F9XA 1OXQA 4J46A 3UEEA 4EB9A 3UW4A 4KJVA 2RAXA 3F7IA 2RAWA 4HY0A 1SDZA 4LGEA 3GT9A 1TFTA 4A0IA 3UIKA 1XOXA 1JD5A 1TW6A 3F7HA 1G73C 1NW9A 3UW5A 3OZ1A 4KMPA 4J44A 3EYLA 2I3HA 2QRAA 5C3KA 4A0NA 3UIJA 1M4MA 1TFQA 1Q4QA 4KJUA 1F3HA 4KMNA 1XB0A 5C3HA 4J47A 2POPB 3UIHA 3T6PA 1QBHA 4J45A 3HL5A 3M0AD 1G3FA 3UEHA 3D9TA 4HY5A 5C7BA 4MTZA 5C84A 3M1DA 3D9UA 3SIQA 2QFAA 4MU7A 3UECA 3CM2A 4WVTA 4HY4A 4OXCA 4LGUA 4WVSA 1OXNA 3M0DD 3UIGA 1OY7A 2POIA 2VSLA 1I3OE 4MTIA
chains in the Genus database with same CATH superfamily
5C83A 1JD4A 5C7DA 3CLXA 3UEDA 5C0LA 2VM5A 1E31A 5C7AA 4J48A 3F7GA 3CM7A 4A0JA 4J3YA 3SIPE 3UEFA 5C7CA 1XB1A 2UVLA 3UEGA 3UIIA 3GTAA 1JD6A 4WVUA 3MUPA 3G76A 4EC4A 3UEIA 5C0KA 2JK7A 1SE0A 1C9QA 2OPZA 2OPYA 2I3IA 1F9XA 1OXQA 4J46A 3UEEA 4EB9A 3UW4A 4KJVA 2RAXA 3F7IA 2RAWA 4HY0A 1SDZA 4LGEA 3GT9A 1TFTA 4A0IA 3UIKA 1XOXA 1JD5A 1TW6A 3F7HA 1G73C 1NW9A 3UW5A 3OZ1A 4KMPA 4J44A 3EYLA 2I3HA 2QRAA 5C3KA 4A0NA 3UIJA 1M4MA 1TFQA 1Q4QA 4KJUA 1F3HA 4KMNA 1XB0A 5C3HA 4J47A 2POPB 3UIHA 3T6PA 1QBHA 4J45A 3HL5A 3M0AD 1G3FA 3UEHA 3D9TA 4HY5A 5C7BA 4MTZA 5C84A 3M1DA 3D9UA 3SIQA 2QFAA 4MU7A 3UECA 3CM2A 4WVTA 4HY4A 4OXCA 4LGUA 4WVSA 1OXNA 3M0DD 3UIGA 1OY7A 2POIA 2VSLA 1I3OE 4MTIA
chains in the Genus database with same CATH topology
5C83A 1JD4A 5C7DA 3CLXA 3UEDA 5C0LA 2VM5A 1E31A 5C7AA 4J48A 3F7GA 3CM7A 4A0JA 4J3YA 3SIPE 3UEFA 5C7CA 1XB1A 2UVLA 3UEGA 3UIIA 3GTAA 1JD6A 4WVUA 3MUPA 3G76A 4EC4A 3UEIA 5C0KA 2JK7A 1SE0A 1C9QA 2OPZA 2OPYA 2I3IA 1F9XA 1OXQA 4J46A 3UEEA 4EB9A 3UW4A 4KJVA 2RAXA 3F7IA 2RAWA 4HY0A 1SDZA 4LGEA 3GT9A 1TFTA 4A0IA 3UIKA 1XOXA 1JD5A 1TW6A 3F7HA 1G73C 1NW9A 3UW5A 3OZ1A 4KMPA 4J44A 3EYLA 2I3HA 2QRAA 5C3KA 4A0NA 3UIJA 1M4MA 1TFQA 1Q4QA 4KJUA 1F3HA 4KMNA 1XB0A 5C3HA 4J47A 2POPB 3UIHA 3T6PA 1QBHA 4J45A 3HL5A 3M0AD 1G3FA 3UEHA 3D9TA 4HY5A 5C7BA 4MTZA 5C84A 3M1DA 3D9UA 3SIQA 2QFAA 4MU7A 3UECA 3CM2A 4WVTA 4HY4A 4OXCA 4LGUA 4WVSA 1OXNA 3M0DD 3UIGA 1OY7A 2POIA 2VSLA 1I3OE 4MTIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5C83 A;  1JD4 A;  5C7D A;  3CLX A;  3UED A;  5C0L A;  2VM5 A;  1E31 A;  5C7A A;  4J48 A;  3F7G A;  3CM7 A;  4A0J A;  4J3Y A;  3SIP E;  3UEF A;  5C7C A;  1XB1 A;  2UVL A;  3UEG A;  3UII A;  3GTA A;  1JD6 A;  4WVU A;  3MUP A;  3G76 A;  4EC4 A;  3UEI A;  5C0K A;  2JK7 A;  1SE0 A;  1C9Q A;  2OPZ A;  2OPY A;  2I3I A;  1F9X A;  1OXQ A;  4J46 A;  3UEE A;  4EB9 A;  3UW4 A;  4KJV A;  2RAX A;  3F7I A;  2RAW A;  4HY0 A;  1SDZ A;  4LGE A;  3GT9 A;  1TFT A;  4A0I A;  3UIK A;  1XOX A;  1JD5 A;  1TW6 A;  3F7H A;  1G73 C;  1NW9 A;  3UW5 A;  3OZ1 A;  4KMP A;  4J44 A;  3EYL A;  2I3H A;  2QRA A;  5C3K A;  4A0N A;  3UIJ A;  1M4M A;  1TFQ A;  1Q4Q A;  4KJU A;  1F3H A;  4KMN A;  1XB0 A;  5C3H A;  4J47 A;  2POP B;  3UIH A;  3T6P A;  1QBH A;  4J45 A;  3HL5 A;  3M0A D;  1G3F A;  3UEH A;  3D9T A;  4HY5 A;  5C7B A;  4MTZ A;  5C84 A;  3M1D A;  3D9U A;  3SIQ A;  2QFA A;  4MU7 A;  3UEC A;  3CM2 A;  4WVT A;  4HY4 A;  4OXC A;  4LGU A;  4WVS A;  1OXN A;  3M0D D;  3UIG A;  1OY7 A;  2POI A;  2VSL A;  1I3O E;  4MTI A; 
#chains in the Genus database with same CATH topology
 5C83 A;  1JD4 A;  5C7D A;  3CLX A;  3UED A;  5C0L A;  2VM5 A;  1E31 A;  5C7A A;  4J48 A;  3F7G A;  3CM7 A;  4A0J A;  4J3Y A;  3SIP E;  3UEF A;  5C7C A;  1XB1 A;  2UVL A;  3UEG A;  3UII A;  3GTA A;  1JD6 A;  4WVU A;  3MUP A;  3G76 A;  4EC4 A;  3UEI A;  5C0K A;  2JK7 A;  1SE0 A;  1C9Q A;  2OPZ A;  2OPY A;  2I3I A;  1F9X A;  1OXQ A;  4J46 A;  3UEE A;  4EB9 A;  3UW4 A;  4KJV A;  2RAX A;  3F7I A;  2RAW A;  4HY0 A;  1SDZ A;  4LGE A;  3GT9 A;  1TFT A;  4A0I A;  3UIK A;  1XOX A;  1JD5 A;  1TW6 A;  3F7H A;  1G73 C;  1NW9 A;  3UW5 A;  3OZ1 A;  4KMP A;  4J44 A;  3EYL A;  2I3H A;  2QRA A;  5C3K A;  4A0N A;  3UIJ A;  1M4M A;  1TFQ A;  1Q4Q A;  4KJU A;  1F3H A;  4KMN A;  1XB0 A;  5C3H A;  4J47 A;  2POP B;  3UIH A;  3T6P A;  1QBH A;  4J45 A;  3HL5 A;  3M0A D;  1G3F A;  3UEH A;  3D9T A;  4HY5 A;  5C7B A;  4MTZ A;  5C84 A;  3M1D A;  3D9U A;  3SIQ A;  2QFA A;  4MU7 A;  3UEC A;  3CM2 A;  4WVT A;  4HY4 A;  4OXC A;  4LGU A;  4WVS A;  1OXN A;  3M0D D;  3UIG A;  1OY7 A;  2POI A;  2VSL A;  1I3O E;  4MTI A; 
#chains in the Genus database with same CATH homology
 5C83 A;  1JD4 A;  5C7D A;  3CLX A;  3UED A;  5C0L A;  2VM5 A;  1E31 A;  5C7A A;  4J48 A;  3F7G A;  3CM7 A;  4A0J A;  4J3Y A;  3SIP E;  3UEF A;  5C7C A;  1XB1 A;  2UVL A;  3UEG A;  3UII A;  3GTA A;  1JD6 A;  4WVU A;  3MUP A;  3G76 A;  4EC4 A;  3UEI A;  5C0K A;  2JK7 A;  1SE0 A;  1C9Q A;  2OPZ A;  2OPY A;  2I3I A;  1F9X A;  1OXQ A;  4J46 A;  3UEE A;  4EB9 A;  3UW4 A;  4KJV A;  2RAX A;  3F7I A;  2RAW A;  4HY0 A;  1SDZ A;  4LGE A;  3GT9 A;  1TFT A;  4A0I A;  3UIK A;  1XOX A;  1JD5 A;  1TW6 A;  3F7H A;  1G73 C;  1NW9 A;  3UW5 A;  3OZ1 A;  4KMP A;  4J44 A;  3EYL A;  2I3H A;  2QRA A;  5C3K A;  4A0N A;  3UIJ A;  1M4M A;  1TFQ A;  1Q4Q A;  4KJU A;  1F3H A;  4KMN A;  1XB0 A;  5C3H A;  4J47 A;  2POP B;  3UIH A;  3T6P A;  1QBH A;  4J45 A;  3HL5 A;  3M0A D;  1G3F A;  3UEH A;  3D9T A;  4HY5 A;  5C7B A;  4MTZ A;  5C84 A;  3M1D A;  3D9U A;  3SIQ A;  2QFA A;  4MU7 A;  3UEC A;  3CM2 A;  4WVT A;  4HY4 A;  4OXC A;  4LGU A;  4WVS A;  1OXN A;  3M0D D;  3UIG A;  1OY7 A;  2POI A;  2VSL A;  1I3O E;  4MTI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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