3V08A

Crystal structure of equine serum albumin
Total Genus 235
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
235
sequence length
581
structure length
581
Chain Sequence
HKSEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAADESAENCDKSLHTLFGDKLCTVATLRATYGELADCCEKQEPERNECFLTHKDDHPNLPKLKPEPDAQCAAFQEDPDKFLGKYLYEVARRHPYFYGPELLFHAEEYKADFTECCPADDKLACLIPKLDALKERILLSSAKERLKCSSFQNFGERAVKAWSVARLSQKFPKADFAEVSKIVTDLTKVHKECCHGDLLECADDRADLAKYICEHQDSISGKLKACCDKPLLQKSHCIAEVKEDDLPSDLPALAADFAEDKEICKHYKDAKDVFLGTFLYEYSRRHPDYSVSLLLRIAKTYEATLEKCCAEADPPACYRTVFDQFTPLVEEPKSLVKKNCDLFEEVGEYDFQNALIVRYTKKAPQVSTPTLVEIGRTLGKVGSRCCKLPESERLPCSENHLALALNRLCVLHEKTPVSEKITKCCTDSLAERRPCFSALELDEGYVPKEFKAETFTFHADICTLPEDEKQIKKQSALAELVKHKPKATKEQLKTVLGNFSAFVAKCCGREDKEACFAEEGPKLVASSQLALA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transport protein
molecule keywords Serum albumin
publication title Structural and immunologic characterization of bovine, horse, and rabbit serum albumins.
pubmed doi rcsb
total genus 235
structure length 581
sequence length 581
ec nomenclature
pdb deposition date 2011-12-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A05
4F5VA 2BXFA 2BXBA 1J7EA 5IJFA 1GNJA 1HK3A 4L8UA 3V03A 1GNIA 2XW1A 1HK1A 1E78A 1E7BA 4JK4A 1HK5A 4ZBQA 1BM0A 4N0FD 4IW2A 2BXCA 4ZBRA 1O9XA 4OT2A 3SQJA 5ID7A 1J78A 1N5UA 2VUFA 2BXQA 3LU7A 4LB2A 3TDLA 2BXPA 4OR0A 4E99A 1E7HA 1MA9A 5FUOA 1AO6A 2XSIA 4LB9A 2BXAA 5IIUA 2XVUA 1E7GA 4PO0A 4LA0A 2BXIA 3A73A 3V09A 2XVWA 3LU6A 4G04A 2BXKA 2BXNA 1E7FA 4L9KA 5GHKA 5ID9A 2BXGA 4S1YA 5DBYA 4F5TA 3LU8A 4LUFA 4HGKA 1E7CA 3B9LA 4G03A 5DQFA 4L9QA 2I30A 4K2CA 4J2VA 3JRYA 1KXPD 4EMXA 2BXEA 1E7IA 1UORA 1H9ZA 1TF0A 1BKEA 4HGMB 5IIXA 2XVVA 3CX9A 2BXLA 4F5SA 3JQZA 3UIVA 4Z69A 5IIHA 3B9MA 5IJ5A 1KW2A 1HK4A 4BKEA 1BJ5A 2YDFA 2I2ZA 2VUEA 2BXMA 1E7AA 3V08A 2BXDA 1HK2A 4LUHA 4N0UD 2BXHA 2BXOA 2BX8A 2XW0A 2VDBA 4IW1A 1E7EA 5HOZA 1LOTA 4K71A 5IFOA 1HA2A 2XVQA 4F5UA 5IJEA
chains in the Genus database with same CATH superfamily
4F5VA 3SIUB 2BXFA 3FNMA 2LQIA 1SB0A 2BXBA 4ZBKA 5BPKA 1J7EA 2LXTA 3KIKA 2JUHA 2NQOA 3FWCC 5IJFA 2DG5A 1GNJA 1HK3A 4L8UA 2K0NA 3V03A 4F5UA 1GNIA 2XW1A 3BPJA 3ECPA 3GQUA 2DYOA 1LNSA 1HK1A 4TQ0A 4Z9OA 4OTTA 1E78A 3G9KD 1E7BA 4JK4A 1HK5A 4MBEC 2QHBA 3KJLA 4ZBQA 1BM0A 1FOUA 4N0FD 4IW2A 1VZSA 2BXCA 3H3AA 4ZBRA 1O9XA 4OT2A 3SQJA 4G01A 5ID7A 1MIVA 1NT2B 4BY9C 1J78A 1N5UA 2VUFA 2BXQA 3LU7A 2AGHB 3NVIA 4I9OA 4LB2A 3TDLA 2BXPA 4OR0A 4E99A 1E7HA 1MA9A 5FUOA 1AO6A 2XSIA 4LB9A 2BXAA 2EFHA 5IIUA 3NVMA 2XVUA 1MUHA 3H37A 3SIVB 1E7GA 4GDLB 4PO0A 1IJGA 2E0YA 4LA0A 2QM6A 1JNBA 2BXIA 2DBWA 2LXSA 3A73A 3M99C 4FIPB 4N3ZA 2XVWA 3V09A 3LU6A 1VFIA 4G04A 5GIPA 2BXKA 2EFDA 3WHRA 2BXNA 1E7FA 4L9KA 3GA9L 5GHKA 2NNWA 4GDKB 5ID9A 2BXGA 2V36A 4S1YA 3NMUA 3MHHB 4GG2A 4ZCGA 5IJEA 5DBYA 4D7XA 4DHXB 2DYMA 2E0XA 4F5TA 3W1SA 3LU8A 4LUFA 4HGKA 1MM8A 1E7CA 3B9LA 4G03A 2KBZA 2EFCA 5DQFA 4L9QA 2I30A 2KWFA 4K2CA 4J2VA 3JRYA 1KXPD 4W4UB 3WHQA 4EMXA 5GINA 2OT3A 4GDXA 2BXEA 1E7IA 2DBUA 1H5WA 1UORA 1H9ZA 1TF0A 1BKEA 3VQIA 2Z8IA 4HGMB 4FK5B 4M70B 1KDXA 1MIWA 4WA6B 3FWBC 2Z8KA 5IIXA 1TXUA 2XVVA 1MIYA 3ICXA 4NAWB 3CX9A 2BXLA 4ZC6A 4F5SA 4DM0A 3JQZA 1MUSA 2QMCA 3UIVA 4Z69A 5IIHA 3B9MA 5IJ5A 2CKXA 1KW2A 3WHSA 1HK4A 4BKEA 1BJ5A 2YDFA 2I2ZA 4OTUA 5B5TA 2OZBB 2DBXA 2VUEA 2BXMA 1E7AA 4FJCB 3V08A 2XMOA 2BXDA 2LOQA 1HK2A 4ZUXV 4LUHA 5GIOA 3MHSB 3PLAA 4N0UD 2LQHA 5D7GA 2BXHA 2BXOA 2BX8A 2XW0A 4C31B 2AJEA 2EFEA 2VDBA 3NVKA 4IW1A 1E7EA 5HOZA 1LOTA 4TQ1A 4K71A 2GUTA 5IFOA 1HA2A 2XVQA 2Z8JA 3GQXA 3A75A 2ROHA
chains in the Genus database with same CATH topology
4F5VA 3SIUB 2BXFA 3FNMA 2BXBA 4ZBKA 5BPKA 1J7EA 3KIKA 2JUHA 2NQOA 3FWCC 5IJFA 2DG5A 1GNJA 1HK3A 4L8UA 3V03A 4F5UA 1GNIA 2XW1A 3GQUA 2DYOA 1LNSA 1HK1A 4Z9OA 4OTTA 1E78A 3G9KD 1E7BA 4JK4A 1HK5A 4MBEC 2QHBA 3KJLA 4ZBQA 1BM0A 1FOUA 4N0FD 4IW2A 1VZSA 2BXCA 3H3AA 4ZBRA 1O9XA 4OT2A 3SQJA 4G01A 5ID7A 1MIVA 1NT2B 4BY9C 1J78A 1N5UA 2VUFA 2BXQA 3LU7A 3NVIA 4LB2A 3TDLA 2BXPA 4OR0A 4E99A 1E7HA 1MA9A 5FUOA 1AO6A 2XSIA 4LB9A 2BXAA 2EFHA 5IIUA 3NVMA 2XVUA 3H37A 3SIVB 1E7GA 4GDLB 4PO0A 1IJGA 2E0YA 4LA0A 2QM6A 1JNBA 2BXIA 2DBWA 3A73A 3M99C 4FIPB 4N3ZA 3V09A 2XVWA 4TQ0A 3LU6A 1VFIA 4G04A 5GIPA 2BXKA 2EFDA 3WHRA 2BXNA 1E7FA 4L9KA 3GA9L 5GHKA 2NNWA 4GDKB 5ID9A 2BXGA 2V36A 4S1YA 3NMUA 3MHHB 4GG2A 4ZCGA 5IJEA 5DBYA 4DHXB 2DYMA 2E0XA 4F5TA 3W1SA 3LU8A 4LUFA 4HGKA 1E7CA 3B9LA 4G03A 2KBZA 2EFCA 5DQFA 4L9QA 2I30A 4K2CA 4J2VA 3JRYA 1KXPD 4W4UB 3WHQA 4EMXA 5GINA 2OT3A 4GDXA 2BXEA 1E7IA 2DBUA 1H5WA 1UORA 1H9ZA 1TF0A 1BKEA 3VQIA 2Z8IA 4HGMB 4FK5B 4M70B 1MIWA 4WA6B 3FWBC 2Z8KA 5IIXA 1TXUA 2XVVA 1MIYA 3ICXA 4NAWB 3CX9A 2BXLA 4ZC6A 4F5SA 3JQZA 2QMCA 3UIVA 4Z69A 5IIHA 3B9MA 5IJ5A 2CKXA 1KW2A 3WHSA 1HK4A 4BKEA 1BJ5A 2YDFA 2I2ZA 4OTUA 5B5TA 2OZBB 2DBXA 2VUEA 2BXMA 1E7AA 4FJCB 3V08A 2XMOA 2BXDA 2LOQA 1HK2A 4ZUXV 4LUHA 5GIOA 3MHSB 3PLAA 4N0UD 5D7GA 2BXHA 2BXOA 2BX8A 2XW0A 4C31B 2AJEA 2EFEA 2VDBA 3NVKA 4IW1A 1E7EA 5HOZA 1LOTA 4TQ1A 4K71A 5IFOA 1HA2A 2XVQA 2Z8JA 3GQXA 3A75A 2ROHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4F5V A;  2BXF A;  2BXB A;  1J7E A;  5IJF A;  1GNJ A;  1HK3 A;  4L8U A;  3V03 A;  1GNI A;  2XW1 A;  1HK1 A;  1E78 A;  1E7B A;  4JK4 A;  1HK5 A;  4ZBQ A;  1BM0 A;  4N0F D;  4IW2 A;  2BXC A;  4ZBR A;  1O9X A;  4OT2 A;  3SQJ A;  5ID7 A;  1J78 A;  1N5U A;  2VUF A;  2BXQ A;  3LU7 A;  4LB2 A;  3TDL A;  2BXP A;  4OR0 A;  4E99 A;  1E7H A;  1MA9 A;  5FUO A;  1AO6 A;  2XSI A;  4LB9 A;  2BXA A;  5IIU A;  2XVU A;  1E7G A;  4PO0 A;  4LA0 A;  2BXI A;  3A73 A;  3V09 A;  2XVW A;  3LU6 A;  4G04 A;  2BXK A;  2BXN A;  1E7F A;  4L9K A;  5GHK A;  5ID9 A;  2BXG A;  4S1Y A;  5DBY A;  4F5T A;  3LU8 A;  4LUF A;  4HGK A;  1E7C A;  3B9L A;  4G03 A;  5DQF A;  4L9Q A;  2I30 A;  4K2C A;  4J2V A;  3JRY A;  1KXP D;  4EMX A;  2BXE A;  1E7I A;  1UOR A;  1H9Z A;  1TF0 A;  1BKE A;  4HGM B;  5IIX A;  2XVV A;  3CX9 A;  2BXL A;  4F5S A;  3JQZ A;  3UIV A;  4Z69 A;  5IIH A;  3B9M A;  5IJ5 A;  1KW2 A;  1HK4 A;  4BKE A;  1BJ5 A;  2YDF A;  2I2Z A;  2VUE A;  2BXM A;  1E7A A;  3V08 A;  2BXD A;  1HK2 A;  4LUH A;  4N0U D;  2BXH A;  2BXO A;  2BX8 A;  2XW0 A;  2VDB A;  4IW1 A;  1E7E A;  5HOZ A;  1LOT A;  4K71 A;  5IFO A;  1HA2 A;  2XVQ A;  4F5U A;  5IJE A; 
#chains in the Genus database with same CATH topology
 4F5V A;  3SIU B;  2BXF A;  3FNM A;  2LQI A;  1SB0 A;  2BXB A;  4ZBK A;  5BPK A;  1J7E A;  2LXT A;  3KIK A;  2JUH A;  2NQO A;  3FWC C;  5IJF A;  2DG5 A;  1GNJ A;  1HK3 A;  4L8U A;  2K0N A;  3V03 A;  4F5U A;  1GNI A;  2XW1 A;  3BPJ A;  3ECP A;  3GQU A;  2DYO A;  1LNS A;  1HK1 A;  4TQ0 A;  4Z9O A;  4OTT A;  1E78 A;  3G9K D;  1E7B A;  4JK4 A;  1HK5 A;  4MBE C;  2QHB A;  3KJL A;  4ZBQ A;  1BM0 A;  1FOU A;  4N0F D;  4IW2 A;  1VZS A;  2BXC A;  3H3A A;  4ZBR A;  1O9X A;  4OT2 A;  3SQJ A;  4G01 A;  5ID7 A;  1MIV A;  1NT2 B;  4BY9 C;  1J78 A;  1N5U A;  2VUF A;  2BXQ A;  3LU7 A;  2AGH B;  3NVI A;  4I9O A;  4LB2 A;  3TDL A;  2BXP A;  4OR0 A;  4E99 A;  1E7H A;  1MA9 A;  5FUO A;  1AO6 A;  2XSI A;  4LB9 A;  2BXA A;  2EFH A;  5IIU A;  3NVM A;  2XVU A;  1MUH A;  3H37 A;  3SIV B;  1E7G A;  4GDL B;  4PO0 A;  1IJG A;  2E0Y A;  4LA0 A;  2QM6 A;  1JNB A;  2BXI A;  2DBW A;  2LXS A;  3A73 A;  3M99 C;  4FIP B;  4N3Z A;  2XVW A;  3V09 A;  3LU6 A;  1VFI A;  4G04 A;  5GIP A;  2BXK A;  2EFD A;  3WHR A;  2BXN A;  1E7F A;  4L9K A;  3GA9 L;  5GHK A;  2NNW A;  4GDK B;  5ID9 A;  2BXG A;  2V36 A;  4S1Y A;  3NMU A;  3MHH B;  4GG2 A;  4ZCG A;  5IJE A;  5DBY A;  4D7X A;  4DHX B;  2DYM A;  2E0X A;  4F5T A;  3W1S A;  3LU8 A;  4LUF A;  4HGK A;  1MM8 A;  1E7C A;  3B9L A;  4G03 A;  2KBZ A;  2EFC A;  5DQF A;  4L9Q A;  2I30 A;  2KWF A;  4K2C A;  4J2V A;  3JRY A;  1KXP D;  4W4U B;  3WHQ A;  4EMX A;  5GIN A;  2OT3 A;  4GDX A;  2BXE A;  1E7I A;  2DBU A;  1H5W A;  1UOR A;  1H9Z A;  1TF0 A;  1BKE A;  3VQI A;  2Z8I A;  4HGM B;  4FK5 B;  4M70 B;  1KDX A;  1MIW A;  4WA6 B;  3FWB C;  2Z8K A;  5IIX A;  1TXU A;  2XVV A;  1MIY A;  3ICX A;  4NAW B;  3CX9 A;  2BXL A;  4ZC6 A;  4F5S A;  4DM0 A;  3JQZ A;  1MUS A;  2QMC A;  3UIV A;  4Z69 A;  5IIH A;  3B9M A;  5IJ5 A;  2CKX A;  1KW2 A;  3WHS A;  1HK4 A;  4BKE A;  1BJ5 A;  2YDF A;  2I2Z A;  4OTU A;  5B5T A;  2OZB B;  2DBX A;  2VUE A;  2BXM A;  1E7A A;  4FJC B;  3V08 A;  2XMO A;  2BXD A;  2LOQ A;  1HK2 A;  4ZUX V;  4LUH A;  5GIO A;  3MHS B;  3PLA A;  4N0U D;  2LQH A;  5D7G A;  2BXH A;  2BXO A;  2BX8 A;  2XW0 A;  4C31 B;  2AJE A;  2EFE A;  2VDB A;  3NVK A;  4IW1 A;  1E7E A;  5HOZ A;  1LOT A;  4TQ1 A;  4K71 A;  2GUT A;  5IFO A;  1HA2 A;  2XVQ A;  2Z8J A;  3GQX A;  3A75 A;  2ROH A; 
#chains in the Genus database with same CATH homology
 4F5V A;  3SIU B;  2BXF A;  3FNM A;  2BXB A;  4ZBK A;  5BPK A;  1J7E A;  3KIK A;  2JUH A;  2NQO A;  3FWC C;  5IJF A;  2DG5 A;  1GNJ A;  1HK3 A;  4L8U A;  3V03 A;  4F5U A;  1GNI A;  2XW1 A;  3GQU A;  2DYO A;  1LNS A;  1HK1 A;  4Z9O A;  4OTT A;  1E78 A;  3G9K D;  1E7B A;  4JK4 A;  1HK5 A;  4MBE C;  2QHB A;  3KJL A;  4ZBQ A;  1BM0 A;  1FOU A;  4N0F D;  4IW2 A;  1VZS A;  2BXC A;  3H3A A;  4ZBR A;  1O9X A;  4OT2 A;  3SQJ A;  4G01 A;  5ID7 A;  1MIV A;  1NT2 B;  4BY9 C;  1J78 A;  1N5U A;  2VUF A;  2BXQ A;  3LU7 A;  3NVI A;  4LB2 A;  3TDL A;  2BXP A;  4OR0 A;  4E99 A;  1E7H A;  1MA9 A;  5FUO A;  1AO6 A;  2XSI A;  4LB9 A;  2BXA A;  2EFH A;  5IIU A;  3NVM A;  2XVU A;  3H37 A;  3SIV B;  1E7G A;  4GDL B;  4PO0 A;  1IJG A;  2E0Y A;  4LA0 A;  2QM6 A;  1JNB A;  2BXI A;  2DBW A;  3A73 A;  3M99 C;  4FIP B;  4N3Z A;  3V09 A;  2XVW A;  4TQ0 A;  3LU6 A;  1VFI A;  4G04 A;  5GIP A;  2BXK A;  2EFD A;  3WHR A;  2BXN A;  1E7F A;  4L9K A;  3GA9 L;  5GHK A;  2NNW A;  4GDK B;  5ID9 A;  2BXG A;  2V36 A;  4S1Y A;  3NMU A;  3MHH B;  4GG2 A;  4ZCG A;  5IJE A;  5DBY A;  4DHX B;  2DYM A;  2E0X A;  4F5T A;  3W1S A;  3LU8 A;  4LUF A;  4HGK A;  1E7C A;  3B9L A;  4G03 A;  2KBZ A;  2EFC A;  5DQF A;  4L9Q A;  2I30 A;  4K2C A;  4J2V A;  3JRY A;  1KXP D;  4W4U B;  3WHQ A;  4EMX A;  5GIN A;  2OT3 A;  4GDX A;  2BXE A;  1E7I A;  2DBU A;  1H5W A;  1UOR A;  1H9Z A;  1TF0 A;  1BKE A;  3VQI A;  2Z8I A;  4HGM B;  4FK5 B;  4M70 B;  1MIW A;  4WA6 B;  3FWB C;  2Z8K A;  5IIX A;  1TXU A;  2XVV A;  1MIY A;  3ICX A;  4NAW B;  3CX9 A;  2BXL A;  4ZC6 A;  4F5S A;  3JQZ A;  2QMC A;  3UIV A;  4Z69 A;  5IIH A;  3B9M A;  5IJ5 A;  2CKX A;  1KW2 A;  3WHS A;  1HK4 A;  4BKE A;  1BJ5 A;  2YDF A;  2I2Z A;  4OTU A;  5B5T A;  2OZB B;  2DBX A;  2VUE A;  2BXM A;  1E7A A;  4FJC B;  3V08 A;  2XMO A;  2BXD A;  2LOQ A;  1HK2 A;  4ZUX V;  4LUH A;  5GIO A;  3MHS B;  3PLA A;  4N0U D;  5D7G A;  2BXH A;  2BXO A;  2BX8 A;  2XW0 A;  4C31 B;  2AJE A;  2EFE A;  2VDB A;  3NVK A;  4IW1 A;  1E7E A;  5HOZ A;  1LOT A;  4TQ1 A;  4K71 A;  5IFO A;  1HA2 A;  2XVQ A;  2Z8J A;  3GQX A;  3A75 A;  2ROH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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