3V08A

Crystal structure of equine serum albumin
Total Genus 235
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
235
sequence length
581
structure length
581
Chain Sequence
HKSEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAADESAENCDKSLHTLFGDKLCTVATLRATYGELADCCEKQEPERNECFLTHKDDHPNLPKLKPEPDAQCAAFQEDPDKFLGKYLYEVARRHPYFYGPELLFHAEEYKADFTECCPADDKLACLIPKLDALKERILLSSAKERLKCSSFQNFGERAVKAWSVARLSQKFPKADFAEVSKIVTDLTKVHKECCHGDLLECADDRADLAKYICEHQDSISGKLKACCDKPLLQKSHCIAEVKEDDLPSDLPALAADFAEDKEICKHYKDAKDVFLGTFLYEYSRRHPDYSVSLLLRIAKTYEATLEKCCAEADPPACYRTVFDQFTPLVEEPKSLVKKNCDLFEEVGEYDFQNALIVRYTKKAPQVSTPTLVEIGRTLGKVGSRCCKLPESERLPCSENHLALALNRLCVLHEKTPVSEKITKCCTDSLAERRPCFSALELDEGYVPKEFKAETFTFHADICTLPEDEKQIKKQSALAELVKHKPKATKEQLKTVLGNFSAFVAKCCGREDKEACFAEEGPKLVASSQLALA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Serum albumin
publication title Structural and immunologic characterization of bovine, horse, and rabbit serum albumins.
pubmed doi rcsb
molecule tags Transport protein
total genus 235
structure length 581
sequence length 581
ec nomenclature
pdb deposition date 2011-12-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A05
4K2CA 5IIHA 4F5UA 1GNJA 2XVUA 4OT2A 4LB2A 1BJ5A 2BXLA 2BXAA 3UIVA 4Z69A 5HOZA 4PO0A 1HK2A 5FUOA 4N0UD 2YDFA 1E78A 2BXCA 2BXOA 3B9LA 4G04A 2XSIA 3CX9A 2VDBA 2BXIA 4F5VA 1HK1A 2BXEA 1MA9A 2XVWA 4IW1A 3LU8A 1BM0A 4F5SA 1HK5A 4BKEA 4LUHA 4EMXA 1H9ZA 4S1YA 4JK4A 4E99A 1J78A 1E7IA 3TDLA 1E7AA 1KXPD 2BXMA 2BX8A 2BXDA 3LU7A 4LUFA 1HK3A 4HGMB 5DBYA 3SQJA 3V03A 5GHKA 1O9XA 2BXGA 2BXNA 4L9QA 2BXHA 3V08A 2BXBA 5ID9A 4IW2A 1HK4A 4J2VA 1E7HA 2I30A 3A73A 3LU6A 2XVVA 4L9KA 3B9MA 4ZBQA 2I2ZA 1GNIA 5IIXA 2XW0A 2BXKA 1E7BA 2BXQA 5DQFA 5IJEA 4LA0A 1E7GA 1TF0A 2XW1A 3JQZA 5IIUA 5IJFA 4L8UA 1E7FA 2VUFA 2XVQA 1LOTA 3V09A 3JRYA 4HGKA 1HA2A 1N5UA 5IFOA 4OR0A 5ID7A 4G03A 4ZBRA 1E7CA 1UORA 2BXFA 1E7EA 1J7EA 2BXPA 1KW2A 2VUEA 4LB9A 4F5TA 4K71A 1AO6A 4N0FD 5IJ5A 1BKEA
chains in the Genus database with same CATH superfamily
4I9OA 4BY9C 2OT3A 4K2CA 2EFDA 2LXTA 5BPKA 5IIHA 4F5UA 1MIWA 1GNJA 4TQ0A 3FNMA 2XVUA 3NVMA 2LQIA 4OT2A 4LB2A 4C31B 1BJ5A 4ZUXV 4FJCB 3NVKA 2BXLA 2BXAA 4NAWB 3UIVA 4Z69A 5GINA 5HOZA 4PO0A 1HK2A 5FUOA 4N0UD 2YDFA 1E78A 2BXCA 2BXOA 2LXSA 3B9LA 1LNSA 2QM6A 2XSIA 3CX9A 4G04A 1IJGA 4WA6B 1VZSA 2NQOA 2VDBA 4FK5B 1FOUA 2BXIA 3NMUA 2DBUA 4F5VA 1HK1A 2K0NA 4OTUA 2BXEA 2ROHA 1MA9A 4W4UB 2AJEA 2XVWA 3PLAA 3G9KD 5B5TA 4IW1A 1SB0A 3LU8A 2QMCA 4GDXA 1BM0A 2EFCA 1HK5A 1MIVA 4F5SA 4BKEA 4LUHA 1H5WA 2CKXA 2EFHA 4MBEC 3GQXA 4EMXA 1H9ZA 4N3ZA 3MHSB 1JNBA 4S1YA 4JK4A 5GIPA 4E99A 1J78A 1E7IA 2LQHA 3TDLA 1E7AA 4DHXB 2NNWA 1MUSA 1KXPD 4ZCGA 2BXMA 2BX8A 2BXDA 3LU7A 1MIYA 3H3AA 2Z8JA 4LUFA 4OTTA 3FWCC 3M99C 1HK3A 3W1SA 4HGMB 5DBYA 3SQJA 3V03A 5GHKA 3SIVB 1O9XA 2BXGA 2V36A 2BXNA 4L9QA 2BXHA 3FWBC 4TQ1A 3V08A 2OZBB 1KDXA 2BXBA 2QHBA 5ID9A 4IW2A 3KJLA 1MUHA 1HK4A 4J2VA 2DYOA 1E7HA 3GA9L 2E0YA 2I30A 3ICXA 2DG5A 3A73A 3LU6A 3VQIA 2XVVA 4L9KA 1VFIA 3SIUB 3ECPA 4ZBKA 3B9MA 3BPJA 3NVIA 4FIPB 4ZBQA 3KIKA 2I2ZA 2Z8IA 1GNIA 5IIXA 3WHSA 2DBWA 2XW0A 2BXKA 1E7BA 2BXQA 4GDLB 4GDKB 4LA0A 5DQFA 5IJEA 1E7GA 2Z8KA 5D7GA 1MM8A 1TF0A 3WHRA 2XW1A 3H37A 3JQZA 5IIUA 3A75A 4L8UA 2DYMA 3WHQA 5IJFA 1E7FA 2VUFA 2EFEA 2XVQA 2XMOA 1LOTA 1NT2B 3JRYA 3V09A 4HGKA 1HA2A 1N5UA 5IFOA 4OR0A 4G01A 3GQUA 5GIOA 4GG2A 2GUTA 4G03A 5ID7A 4ZBRA 1E7CA 1TXUA 2AGHB 4D7XA 1UORA 2BXFA 2KWFA 2KBZA 1E7EA 1J7EA 4DM0A 2BXPA 1KW2A 2E0XA 2LOQA 2VUEA 4LB9A 3MHHB 2DBXA 4F5TA 4K71A 1AO6A 4M70B 4N0FD 4Z9OA 4ZC6A 5IJ5A 1BKEA 2JUHA
chains in the Genus database with same CATH topology
4BY9C 2OT3A 4K2CA 2EFDA 5IIHA 5BPKA 4F5UA 1MIWA 1GNJA 4TQ0A 3FNMA 2XVUA 3NVMA 4OT2A 4C31B 4LB2A 4ZUXV 1BJ5A 4FJCB 3NVKA 2BXLA 2BXAA 4NAWB 3UIVA 4Z69A 5GINA 5HOZA 4PO0A 1HK2A 5FUOA 4N0UD 2YDFA 1E78A 2BXCA 2BXOA 3B9LA 1LNSA 2QM6A 2XSIA 3CX9A 4G04A 1IJGA 4WA6B 1VZSA 2NQOA 2VDBA 4FK5B 1FOUA 2BXIA 3NMUA 2DBUA 4F5VA 1HK1A 4OTUA 2BXEA 2ROHA 1MA9A 4W4UB 2AJEA 2XVWA 3PLAA 3G9KD 5B5TA 4IW1A 3LU8A 2QMCA 4GDXA 1BM0A 2EFCA 1HK5A 1MIVA 4F5SA 4BKEA 4LUHA 1H5WA 2CKXA 2EFHA 4MBEC 3GQXA 4EMXA 1H9ZA 4N3ZA 3MHSB 1JNBA 4S1YA 4JK4A 5GIPA 4E99A 1J78A 1E7IA 3TDLA 1E7AA 4DHXB 2NNWA 1KXPD 4ZCGA 2BXMA 2BX8A 2BXDA 3LU7A 1MIYA 3H3AA 2Z8JA 4LUFA 4OTTA 3FWCC 3M99C 1HK3A 3W1SA 4HGMB 5DBYA 3SQJA 3V03A 5GHKA 3SIVB 1O9XA 2BXGA 2V36A 2BXNA 4L9QA 2BXHA 3FWBC 4TQ1A 3V08A 2OZBB 2BXBA 2QHBA 5ID9A 4IW2A 3KJLA 1HK4A 4J2VA 2DYOA 1E7HA 3GA9L 2E0YA 2I30A 3ICXA 2DG5A 3A73A 3LU6A 3VQIA 2XVVA 4L9KA 1VFIA 3SIUB 4ZBKA 3B9MA 3NVIA 4FIPB 4ZBQA 3KIKA 2I2ZA 2Z8IA 1GNIA 5IIXA 3WHSA 2DBWA 2XW0A 2BXKA 1E7BA 2BXQA 4GDLB 4GDKB 4LA0A 5DQFA 5IJEA 1E7GA 2Z8KA 5D7GA 1TF0A 3WHRA 2XW1A 3H37A 3JQZA 5IIUA 3A75A 4L8UA 2DYMA 3WHQA 5IJFA 1E7FA 2VUFA 2EFEA 2XVQA 2XMOA 1LOTA 1NT2B 3JRYA 3V09A 4HGKA 1HA2A 1N5UA 5IFOA 4OR0A 4G01A 3GQUA 5GIOA 4GG2A 5ID7A 4G03A 4ZBRA 1E7CA 1TXUA 1UORA 2BXFA 2KBZA 1E7EA 1J7EA 2BXPA 1KW2A 2E0XA 2LOQA 2VUEA 4LB9A 3MHHB 2DBXA 4F5TA 4K71A 1AO6A 4M70B 4N0FD 4Z9OA 4ZC6A 5IJ5A 1BKEA 2JUHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4K2C A;  5IIH A;  4F5U A;  1GNJ A;  2XVU A;  4OT2 A;  4LB2 A;  1BJ5 A;  2BXL A;  2BXA A;  3UIV A;  4Z69 A;  5HOZ A;  4PO0 A;  1HK2 A;  5FUO A;  4N0U D;  2YDF A;  1E78 A;  2BXC A;  2BXO A;  3B9L A;  4G04 A;  2XSI A;  3CX9 A;  2VDB A;  2BXI A;  4F5V A;  1HK1 A;  2BXE A;  1MA9 A;  2XVW A;  4IW1 A;  3LU8 A;  1BM0 A;  4F5S A;  1HK5 A;  4BKE A;  4LUH A;  4EMX A;  1H9Z A;  4S1Y A;  4JK4 A;  4E99 A;  1J78 A;  1E7I A;  3TDL A;  1E7A A;  1KXP D;  2BXM A;  2BX8 A;  2BXD A;  3LU7 A;  4LUF A;  1HK3 A;  4HGM B;  5DBY A;  3SQJ A;  3V03 A;  5GHK A;  1O9X A;  2BXG A;  2BXN A;  4L9Q A;  2BXH A;  3V08 A;  2BXB A;  5ID9 A;  4IW2 A;  1HK4 A;  4J2V A;  1E7H A;  2I30 A;  3A73 A;  3LU6 A;  2XVV A;  4L9K A;  3B9M A;  4ZBQ A;  2I2Z A;  1GNI A;  5IIX A;  2XW0 A;  2BXK A;  1E7B A;  2BXQ A;  5DQF A;  5IJE A;  4LA0 A;  1E7G A;  1TF0 A;  2XW1 A;  3JQZ A;  5IIU A;  5IJF A;  4L8U A;  1E7F A;  2VUF A;  2XVQ A;  1LOT A;  3V09 A;  3JRY A;  4HGK A;  1HA2 A;  1N5U A;  5IFO A;  4OR0 A;  5ID7 A;  4G03 A;  4ZBR A;  1E7C A;  1UOR A;  2BXF A;  1E7E A;  1J7E A;  2BXP A;  1KW2 A;  2VUE A;  4LB9 A;  4F5T A;  4K71 A;  1AO6 A;  4N0F D;  5IJ5 A;  1BKE A; 
#chains in the Genus database with same CATH topology
 4I9O A;  4BY9 C;  2OT3 A;  4K2C A;  2EFD A;  2LXT A;  5BPK A;  5IIH A;  4F5U A;  1MIW A;  1GNJ A;  4TQ0 A;  3FNM A;  2XVU A;  3NVM A;  2LQI A;  4OT2 A;  4LB2 A;  4C31 B;  1BJ5 A;  4ZUX V;  4FJC B;  3NVK A;  2BXL A;  2BXA A;  4NAW B;  3UIV A;  4Z69 A;  5GIN A;  5HOZ A;  4PO0 A;  1HK2 A;  5FUO A;  4N0U D;  2YDF A;  1E78 A;  2BXC A;  2BXO A;  2LXS A;  3B9L A;  1LNS A;  2QM6 A;  2XSI A;  3CX9 A;  4G04 A;  1IJG A;  4WA6 B;  1VZS A;  2NQO A;  2VDB A;  4FK5 B;  1FOU A;  2BXI A;  3NMU A;  2DBU A;  4F5V A;  1HK1 A;  2K0N A;  4OTU A;  2BXE A;  2ROH A;  1MA9 A;  4W4U B;  2AJE A;  2XVW A;  3PLA A;  3G9K D;  5B5T A;  4IW1 A;  1SB0 A;  3LU8 A;  2QMC A;  4GDX A;  1BM0 A;  2EFC A;  1HK5 A;  1MIV A;  4F5S A;  4BKE A;  4LUH A;  1H5W A;  2CKX A;  2EFH A;  4MBE C;  3GQX A;  4EMX A;  1H9Z A;  4N3Z A;  3MHS B;  1JNB A;  4S1Y A;  4JK4 A;  5GIP A;  4E99 A;  1J78 A;  1E7I A;  2LQH A;  3TDL A;  1E7A A;  4DHX B;  2NNW A;  1MUS A;  1KXP D;  4ZCG A;  2BXM A;  2BX8 A;  2BXD A;  3LU7 A;  1MIY A;  3H3A A;  2Z8J A;  4LUF A;  4OTT A;  3FWC C;  3M99 C;  1HK3 A;  3W1S A;  4HGM B;  5DBY A;  3SQJ A;  3V03 A;  5GHK A;  3SIV B;  1O9X A;  2BXG A;  2V36 A;  2BXN A;  4L9Q A;  2BXH A;  3FWB C;  4TQ1 A;  3V08 A;  2OZB B;  1KDX A;  2BXB A;  2QHB A;  5ID9 A;  4IW2 A;  3KJL A;  1MUH A;  1HK4 A;  4J2V A;  2DYO A;  1E7H A;  3GA9 L;  2E0Y A;  2I30 A;  3ICX A;  2DG5 A;  3A73 A;  3LU6 A;  3VQI A;  2XVV A;  4L9K A;  1VFI A;  3SIU B;  3ECP A;  4ZBK A;  3B9M A;  3BPJ A;  3NVI A;  4FIP B;  4ZBQ A;  3KIK A;  2I2Z A;  2Z8I A;  1GNI A;  5IIX A;  3WHS A;  2DBW A;  2XW0 A;  2BXK A;  1E7B A;  2BXQ A;  4GDL B;  4GDK B;  4LA0 A;  5DQF A;  5IJE A;  1E7G A;  2Z8K A;  5D7G A;  1MM8 A;  1TF0 A;  3WHR A;  2XW1 A;  3H37 A;  3JQZ A;  5IIU A;  3A75 A;  4L8U A;  2DYM A;  3WHQ A;  5IJF A;  1E7F A;  2VUF A;  2EFE A;  2XVQ A;  2XMO A;  1LOT A;  1NT2 B;  3JRY A;  3V09 A;  4HGK A;  1HA2 A;  1N5U A;  5IFO A;  4OR0 A;  4G01 A;  3GQU A;  5GIO A;  4GG2 A;  2GUT A;  4G03 A;  5ID7 A;  4ZBR A;  1E7C A;  1TXU A;  2AGH B;  4D7X A;  1UOR A;  2BXF A;  2KWF A;  2KBZ A;  1E7E A;  1J7E A;  4DM0 A;  2BXP A;  1KW2 A;  2E0X A;  2LOQ A;  2VUE A;  4LB9 A;  3MHH B;  2DBX A;  4F5T A;  4K71 A;  1AO6 A;  4M70 B;  4N0F D;  4Z9O A;  4ZC6 A;  5IJ5 A;  1BKE A;  2JUH A; 
#chains in the Genus database with same CATH homology
 4BY9 C;  2OT3 A;  4K2C A;  2EFD A;  5IIH A;  5BPK A;  4F5U A;  1MIW A;  1GNJ A;  4TQ0 A;  3FNM A;  2XVU A;  3NVM A;  4OT2 A;  4C31 B;  4LB2 A;  4ZUX V;  1BJ5 A;  4FJC B;  3NVK A;  2BXL A;  2BXA A;  4NAW B;  3UIV A;  4Z69 A;  5GIN A;  5HOZ A;  4PO0 A;  1HK2 A;  5FUO A;  4N0U D;  2YDF A;  1E78 A;  2BXC A;  2BXO A;  3B9L A;  1LNS A;  2QM6 A;  2XSI A;  3CX9 A;  4G04 A;  1IJG A;  4WA6 B;  1VZS A;  2NQO A;  2VDB A;  4FK5 B;  1FOU A;  2BXI A;  3NMU A;  2DBU A;  4F5V A;  1HK1 A;  4OTU A;  2BXE A;  2ROH A;  1MA9 A;  4W4U B;  2AJE A;  2XVW A;  3PLA A;  3G9K D;  5B5T A;  4IW1 A;  3LU8 A;  2QMC A;  4GDX A;  1BM0 A;  2EFC A;  1HK5 A;  1MIV A;  4F5S A;  4BKE A;  4LUH A;  1H5W A;  2CKX A;  2EFH A;  4MBE C;  3GQX A;  4EMX A;  1H9Z A;  4N3Z A;  3MHS B;  1JNB A;  4S1Y A;  4JK4 A;  5GIP A;  4E99 A;  1J78 A;  1E7I A;  3TDL A;  1E7A A;  4DHX B;  2NNW A;  1KXP D;  4ZCG A;  2BXM A;  2BX8 A;  2BXD A;  3LU7 A;  1MIY A;  3H3A A;  2Z8J A;  4LUF A;  4OTT A;  3FWC C;  3M99 C;  1HK3 A;  3W1S A;  4HGM B;  5DBY A;  3SQJ A;  3V03 A;  5GHK A;  3SIV B;  1O9X A;  2BXG A;  2V36 A;  2BXN A;  4L9Q A;  2BXH A;  3FWB C;  4TQ1 A;  3V08 A;  2OZB B;  2BXB A;  2QHB A;  5ID9 A;  4IW2 A;  3KJL A;  1HK4 A;  4J2V A;  2DYO A;  1E7H A;  3GA9 L;  2E0Y A;  2I30 A;  3ICX A;  2DG5 A;  3A73 A;  3LU6 A;  3VQI A;  2XVV A;  4L9K A;  1VFI A;  3SIU B;  4ZBK A;  3B9M A;  3NVI A;  4FIP B;  4ZBQ A;  3KIK A;  2I2Z A;  2Z8I A;  1GNI A;  5IIX A;  3WHS A;  2DBW A;  2XW0 A;  2BXK A;  1E7B A;  2BXQ A;  4GDL B;  4GDK B;  4LA0 A;  5DQF A;  5IJE A;  1E7G A;  2Z8K A;  5D7G A;  1TF0 A;  3WHR A;  2XW1 A;  3H37 A;  3JQZ A;  5IIU A;  3A75 A;  4L8U A;  2DYM A;  3WHQ A;  5IJF A;  1E7F A;  2VUF A;  2EFE A;  2XVQ A;  2XMO A;  1LOT A;  1NT2 B;  3JRY A;  3V09 A;  4HGK A;  1HA2 A;  1N5U A;  5IFO A;  4OR0 A;  4G01 A;  3GQU A;  5GIO A;  4GG2 A;  5ID7 A;  4G03 A;  4ZBR A;  1E7C A;  1TXU A;  1UOR A;  2BXF A;  2KBZ A;  1E7E A;  1J7E A;  2BXP A;  1KW2 A;  2E0X A;  2LOQ A;  2VUE A;  4LB9 A;  3MHH B;  2DBX A;  4F5T A;  4K71 A;  1AO6 A;  4M70 B;  4N0F D;  4Z9O A;  4ZC6 A;  5IJ5 A;  1BKE A;  2JUH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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