3V4TA

E. cloacae c115d mura liganded with unag
Total Genus 138
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
138
sequence length
419
structure length
418
Chain Sequence
MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERGSVWIDASNVNNFSAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGDAIGARPVDLHIFGLEKLGAEIKLEEGYVKASVNGRLKGAHIVMDKVSVGATVTIMSAATLAEGTTIIENAAREPEIVDTANFLVALGAKISGQGTDRITIEGVERLGGGVYRVLPDRIETGTFLVAAAISGGKIVCRNAQPDTLDAVLAKLREAGADIETGEDWISLDMHGKRPKAVTVRTAPHPAFPTDMQAQFTLLNLVAEGTGVITETIFENRFMHVPELIRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIERVKGE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords UDP-N-acetylglucosamine 1-carboxyvinyltransferase
publication title Functional Consequence of Covalent Reaction of Phosphoenolpyruvate with UDP-N-acetylglucosamine 1-Carboxyvinyltransferase (MurA).
pubmed doi rcsb
source organism Enterobacter cloacae
total genus 138
structure length 418
sequence length 419
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature ec 2.5.1.7: UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
pdb deposition date 2011-12-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3v4tA02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3v4tA01
2O0EA 3SU9A 3FK1A 3NVSA 1EJCA 1RF6A 3SWDA 2QFSA 1P88A 1Q36A 2QFUA 3UPKA 2Z2CA 3R38A 1RF4A 1G6TA 2PQCA 2AAYA 1NAWA 2O0DA 2PQDA 3FJXA 4FQDA 3RMTA 4EIIA 3TR1A 1A2NA 3KQAA 4EGRA 4N3PA 1G6SA 1MI4A 2QFQA 1DLGA 3ZH3A 1Q3GA 2RL1A 3KR6A 3LTHA 2O15A 3ISSA 2BJBA 2PQBA 4E7EA 3FJZA 4E7BA 1RYWA 1X8TA 3SPBA 1EYNA 3V5VA 2O0XA 3SWAA 3SLHA 4R7UA 1UAEA 2O0BA 1EJDA 3FK0A 5BQ2A 4E7DA 3SWQA 2GG4A 4ZNDA 5U4HA 3ROIA 3SWEA 2YVWA 3VCYA 3KQJA 3SWGA 2QFTA 2O0ZA 4GFPA 2GG6A 1P89A 2GGDA 1X8RA 3V4TA 1RF5A 2AA9A 2PQ9A 2RL2A 5BS5A 4E7GA 3ZH4A 4E7CA 3SG1A 5BUFA 3TI2A 3SWIA 4E7FA 1YBGA 2GGAA
chains in the Genus database with same CATH superfamily
3TV1A 2O0EA 3SU9A 3FK1A 3NVSA 1EJCA 1RF6A 3SWDA 2QFSA 1P88A 1Q36A 2QFUA 3UPKA 1QMHA 2Z2CA 3R38A 1RF4A 1G6TA 2PQCA 2AAYA 1NAWA 3KGDA 2O0DA 2PQDA 1QMIA 3FJXA 4FQDA 3RMTA 4EIIA 3TR1A 1A2NA 3KQAA 4EGRA 4N3PA 1G6SA 1MI4A 2QFQA 1DLGA 3ZH3A 1Q3GA 2RL1A 3KR6A 3TUXA 3LTHA 3PQVA 2O15A 3ISSA 2BJBA 2PQBA 4E7EA 3FJZA 4E7BA 1RYWA 1X8TA 3SPBA 1EYNA 3V5VA 2O0XA 3SWAA 3SLHA 4R7UA 1UAEA 4O8JA 2O0BA 1EJDA 3FK0A 5BQ2A 4E7DA 3SWQA 2GG4A 3TW3A 4ZNDA 5U4HA 3ROIA 4CLQA 3SWEA 2YVWA 3VCYA 4O89A 3KQJA 3SWGA 2QFTA 2O0ZA 4GFPA 2GG6A 1P89A 2GGDA 1X8RA 1RF5A 3V4TA 2AA9A 2PQ9A 2RL2A 5BS5A 4E7GA 3ZH4A 4E7CA 3SG1A 5BUFA 3TI2A 3SWIA 4E7FA 1YBGA 2GGAA 3TUTA
chains in the Genus database with same CATH topology
2O0EA 3SU9A 3FK1A 3NVSA 1EJCA 1RF6A 3SWDA 2QFSA 1P88A 1Q36A 2QFUA 3UPKA 2Z2CA 3R38A 1RF4A 1G6TA 2PQCA 2AAYA 1NAWA 2O0DA 2PQDA 3FJXA 4FQDA 3RMTA 4EIIA 3TR1A 1A2NA 3KQAA 4EGRA 4N3PA 1G6SA 1MI4A 2QFQA 1DLGA 3ZH3A 1Q3GA 2RL1A 3KR6A 3LTHA 2O15A 3ISSA 2BJBA 2PQBA 4E7EA 3FJZA 4E7BA 1RYWA 1X8TA 3SPBA 1EYNA 3V5VA 2O0XA 3SWAA 3SLHA 4R7UA 1UAEA 2O0BA 1EJDA 3FK0A 5BQ2A 4E7DA 3SWQA 2GG4A 4ZNDA 5U4HA 3ROIA 3SWEA 2YVWA 3VCYA 3KQJA 3SWGA 2QFTA 2O0ZA 4GFPA 2GG6A 1P89A 2GGDA 1X8RA 3V4TA 1RF5A 2AA9A 2PQ9A 2RL2A 5BS5A 4E7GA 3ZH4A 4E7CA 3SG1A 5BUFA 3TI2A 3SWIA 4E7FA 1YBGA 2GGAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2O0E A;  3SU9 A;  3FK1 A;  3NVS A;  1EJC A;  1RF6 A;  3SWD A;  2QFS A;  1P88 A;  1Q36 A;  2QFU A;  3UPK A;  2Z2C A;  3R38 A;  1RF4 A;  1G6T A;  2PQC A;  2AAY A;  1NAW A;  2O0D A;  2PQD A;  3FJX A;  4FQD A;  3RMT A;  4EII A;  3TR1 A;  1A2N A;  3KQA A;  4EGR A;  4N3P A;  1G6S A;  1MI4 A;  2QFQ A;  1DLG A;  3ZH3 A;  1Q3G A;  2RL1 A;  3KR6 A;  3LTH A;  2O15 A;  3ISS A;  2BJB A;  2PQB A;  4E7E A;  3FJZ A;  4E7B A;  1RYW A;  1X8T A;  3SPB A;  1EYN A;  3V5V A;  2O0X A;  3SWA A;  3SLH A;  4R7U A;  1UAE A;  2O0B A;  1EJD A;  3FK0 A;  5BQ2 A;  4E7D A;  3SWQ A;  2GG4 A;  4ZND A;  5U4H A;  3ROI A;  3SWE A;  2YVW A;  3VCY A;  3KQJ A;  3SWG A;  2QFT A;  2O0Z A;  4GFP A;  2GG6 A;  1P89 A;  2GGD A;  1X8R A;  3V4T A;  1RF5 A;  2AA9 A;  2PQ9 A;  2RL2 A;  5BS5 A;  4E7G A;  3ZH4 A;  4E7C A;  3SG1 A;  5BUF A;  3TI2 A;  3SWI A;  4E7F A;  1YBG A;  2GGA A; 
#chains in the Genus database with same CATH topology
 3TV1 A;  2O0E A;  3SU9 A;  3FK1 A;  3NVS A;  1EJC A;  1RF6 A;  3SWD A;  2QFS A;  1P88 A;  1Q36 A;  2QFU A;  3UPK A;  1QMH A;  2Z2C A;  3R38 A;  1RF4 A;  1G6T A;  2PQC A;  2AAY A;  1NAW A;  3KGD A;  2O0D A;  2PQD A;  1QMI A;  3FJX A;  4FQD A;  3RMT A;  4EII A;  3TR1 A;  1A2N A;  3KQA A;  4EGR A;  4N3P A;  1G6S A;  1MI4 A;  2QFQ A;  1DLG A;  3ZH3 A;  1Q3G A;  2RL1 A;  3KR6 A;  3TUX A;  3LTH A;  3PQV A;  2O15 A;  3ISS A;  2BJB A;  2PQB A;  4E7E A;  3FJZ A;  4E7B A;  1RYW A;  1X8T A;  3SPB A;  1EYN A;  3V5V A;  2O0X A;  3SWA A;  3SLH A;  4R7U A;  1UAE A;  4O8J A;  2O0B A;  1EJD A;  3FK0 A;  5BQ2 A;  4E7D A;  3SWQ A;  2GG4 A;  3TW3 A;  4ZND A;  5U4H A;  3ROI A;  4CLQ A;  3SWE A;  2YVW A;  3VCY A;  4O89 A;  3KQJ A;  3SWG A;  2QFT A;  2O0Z A;  4GFP A;  2GG6 A;  1P89 A;  2GGD A;  1X8R A;  1RF5 A;  3V4T A;  2AA9 A;  2PQ9 A;  2RL2 A;  5BS5 A;  4E7G A;  3ZH4 A;  4E7C A;  3SG1 A;  5BUF A;  3TI2 A;  3SWI A;  4E7F A;  1YBG A;  2GGA A;  3TUT A; 
#chains in the Genus database with same CATH homology
 2O0E A;  3SU9 A;  3FK1 A;  3NVS A;  1EJC A;  1RF6 A;  3SWD A;  2QFS A;  1P88 A;  1Q36 A;  2QFU A;  3UPK A;  2Z2C A;  3R38 A;  1RF4 A;  1G6T A;  2PQC A;  2AAY A;  1NAW A;  2O0D A;  2PQD A;  3FJX A;  4FQD A;  3RMT A;  4EII A;  3TR1 A;  1A2N A;  3KQA A;  4EGR A;  4N3P A;  1G6S A;  1MI4 A;  2QFQ A;  1DLG A;  3ZH3 A;  1Q3G A;  2RL1 A;  3KR6 A;  3LTH A;  2O15 A;  3ISS A;  2BJB A;  2PQB A;  4E7E A;  3FJZ A;  4E7B A;  1RYW A;  1X8T A;  3SPB A;  1EYN A;  3V5V A;  2O0X A;  3SWA A;  3SLH A;  4R7U A;  1UAE A;  2O0B A;  1EJD A;  3FK0 A;  5BQ2 A;  4E7D A;  3SWQ A;  2GG4 A;  4ZND A;  5U4H A;  3ROI A;  3SWE A;  2YVW A;  3VCY A;  3KQJ A;  3SWG A;  2QFT A;  2O0Z A;  4GFP A;  2GG6 A;  1P89 A;  2GGD A;  1X8R A;  3V4T A;  1RF5 A;  2AA9 A;  2PQ9 A;  2RL2 A;  5BS5 A;  4E7G A;  3ZH4 A;  4E7C A;  3SG1 A;  5BUF A;  3TI2 A;  3SWI A;  4E7F A;  1YBG A;  2GGA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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