3X22A

Crystal structure of escherichia coli nitroreductase nfsb mutant n71s/f123a/f124w
Total Genus 73
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
73
sequence length
217
structure length
217
Chain Sequence
MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARVAKSAAGNYVFSERKMLDASHVVVFCAKTAMDDVWLKLVVDQEDADGRFATPEAKAANDKGRKAWADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDAVPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords Oxygen-insensitive NAD(P)H nitroreductase
publication title Structural basis of Escherichia coli nitroreductase NfsB triple mutants engineered for improved activity and regioselectivity toward the prodrug CB1954
doi rcsb
source organism Escherichia coli k-12
total genus 73
structure length 217
sequence length 217
chains with identical sequence B
ec nomenclature ec 1.5.1.34: 6,7-dihydropteridine reductase.
pdb deposition date 2014-12-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00881 Nitroreductase Nitroreductase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.109.10 Alpha Beta 3-Layer(aba) Sandwich NADH Oxidase NADH Oxidase 3x22A00
1YLRA 3EO8A 1VFRA 3GB5A 3PXVA 1OONA 4XOQA 2YMVA 1ICUA 1KQCA 1ICRA 3N2SA 4QLXA 3GR3A 1KQBA 3QDLA 4XOMA 3K6HA 1NECA 3BEMA 3GH8A 4URPA 4QLYA 2I7HA 3GBHA 1OOQA 1ZCHA 3G14A 4BN9A 2R01A 3X21A 4G8SA 4EO3A 4BNBA 3GE6A 1YLUA 2ISJA 3E39A 3KWKA 3GAGA 3EOFA 5KRDA 2ISLA 3M5KA 5KO7A 1OO5A 2WQFA 1VKWA 1KQDA 3GFDA 3GFAA 1DS7A 4BN8A 4XOOA 5KO8A 3EO7A 2WZWA 3TNZA 4TTBA 3BM1A 1NOXA 3HJ9A 4DN2A 2FREA 4BN6A 1V5ZA 3BM2A 3E10A 5J6CA 1YWQA 5HDJA 2BKJA 3HOIA 2ISKA 5HEIA 3EK3A 2H0UA 2B67A 3KOQA 1YKIA 4TTCA 1OO6A 1ICVA 4BN7A 3HZNA 3H4OA 3OF4A 1IDTA 3X22A 3TO0A 1BKJA 3GE5A 2HAYA 2WZVA 1V5YA 1F5VA 2IFAA
chains in the Genus database with same CATH superfamily
1YLRA 3EO8A 1VFRA 3GB5A 3PXVA 1OONA 4XOQA 2YMVA 1ICUA 1KQCA 1ICRA 3N2SA 4QLXA 3GR3A 1KQBA 3QDLA 4XOMA 3K6HA 1NECA 3BEMA 3GH8A 4URPA 4QLYA 2I7HA 3GBHA 1OOQA 1ZCHA 3G14A 4BN9A 2R01A 3X21A 4G8SA 4EO3A 4BNBA 3GE6A 1YLUA 2ISJA 3E39A 3KWKA 3GAGA 3EOFA 5KRDA 2ISLA 3M5KA 5KO7A 1OO5A 2WQFA 1VKWA 1KQDA 3GFDA 3GFAA 1DS7A 4BN8A 4XOOA 5KO8A 3EO7A 2WZWA 3TNZA 4TTBA 3BM1A 1NOXA 3HJ9A 4DN2A 2FREA 4BN6A 1V5ZA 3BM2A 3E10A 5J6CA 1YWQA 1J6RA 5HDJA 2BKJA 3HOIA 2ISKA 5HEIA 3EK3A 2H0UA 2B67A 3KOQA 1YKIA 4TTCA 1OO6A 1ICVA 4BN7A 3HZNA 3H4OA 3OF4A 1IDTA 3X22A 3TO0A 1BKJA 3GE5A 2HAYA 2WZVA 1V5YA 1F5VA 2IFAA
chains in the Genus database with same CATH topology
1YLRA 3EO8A 1VFRA 3GB5A 3PXVA 1OONA 4XOQA 2YMVA 1ICUA 1KQCA 1ICRA 3N2SA 4QLXA 3GR3A 1KQBA 3QDLA 4XOMA 3K6HA 1NECA 3BEMA 3GH8A 4URPA 4QLYA 2I7HA 3GBHA 1OOQA 1ZCHA 3G14A 4BN9A 2R01A 3X21A 4G8SA 4EO3A 4BNBA 3GE6A 1YLUA 2ISJA 3E39A 3KWKA 3GAGA 3EOFA 5KRDA 2ISLA 3M5KA 5KO7A 1OO5A 2WQFA 1VKWA 1KQDA 3GFDA 3GFAA 1DS7A 4BN8A 4XOOA 5KO8A 3EO7A 2WZWA 3TNZA 4TTBA 3BM1A 1NOXA 3HJ9A 4DN2A 2FREA 4BN6A 1V5ZA 3BM2A 3E10A 5J6CA 1YWQA 1J6RA 5HDJA 2BKJA 3HOIA 2ISKA 5HEIA 3EK3A 2H0UA 2B67A 3KOQA 1YKIA 4TTCA 1OO6A 1ICVA 4BN7A 3HZNA 3H4OA 3OF4A 1IDTA 3X22A 3TO0A 1BKJA 3GE5A 2HAYA 2WZVA 1V5YA 1F5VA 2IFAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1YLR A;  3EO8 A;  1VFR A;  3GB5 A;  3PXV A;  1OON A;  4XOQ A;  2YMV A;  1ICU A;  1KQC A;  1ICR A;  3N2S A;  4QLX A;  3GR3 A;  1KQB A;  3QDL A;  4XOM A;  3K6H A;  1NEC A;  3BEM A;  3GH8 A;  4URP A;  4QLY A;  2I7H A;  3GBH A;  1OOQ A;  1ZCH A;  3G14 A;  4BN9 A;  2R01 A;  3X21 A;  4G8S A;  4EO3 A;  4BNB A;  3GE6 A;  1YLU A;  2ISJ A;  3E39 A;  3KWK A;  3GAG A;  3EOF A;  5KRD A;  2ISL A;  3M5K A;  5KO7 A;  1OO5 A;  2WQF A;  1VKW A;  1KQD A;  3GFD A;  3GFA A;  1DS7 A;  4BN8 A;  4XOO A;  5KO8 A;  3EO7 A;  2WZW A;  3TNZ A;  4TTB A;  3BM1 A;  1NOX A;  3HJ9 A;  4DN2 A;  2FRE A;  4BN6 A;  1V5Z A;  3BM2 A;  3E10 A;  5J6C A;  1YWQ A;  5HDJ A;  2BKJ A;  3HOI A;  2ISK A;  5HEI A;  3EK3 A;  2H0U A;  2B67 A;  3KOQ A;  1YKI A;  4TTC A;  1OO6 A;  1ICV A;  4BN7 A;  3HZN A;  3H4O A;  3OF4 A;  1IDT A;  3X22 A;  3TO0 A;  1BKJ A;  3GE5 A;  2HAY A;  2WZV A;  1V5Y A;  1F5V A;  2IFA A; 
#chains in the Genus database with same CATH topology
 1YLR A;  3EO8 A;  1VFR A;  3GB5 A;  3PXV A;  1OON A;  4XOQ A;  2YMV A;  1ICU A;  1KQC A;  1ICR A;  3N2S A;  4QLX A;  3GR3 A;  1KQB A;  3QDL A;  4XOM A;  3K6H A;  1NEC A;  3BEM A;  3GH8 A;  4URP A;  4QLY A;  2I7H A;  3GBH A;  1OOQ A;  1ZCH A;  3G14 A;  4BN9 A;  2R01 A;  3X21 A;  4G8S A;  4EO3 A;  4BNB A;  3GE6 A;  1YLU A;  2ISJ A;  3E39 A;  3KWK A;  3GAG A;  3EOF A;  5KRD A;  2ISL A;  3M5K A;  5KO7 A;  1OO5 A;  2WQF A;  1VKW A;  1KQD A;  3GFD A;  3GFA A;  1DS7 A;  4BN8 A;  4XOO A;  5KO8 A;  3EO7 A;  2WZW A;  3TNZ A;  4TTB A;  3BM1 A;  1NOX A;  3HJ9 A;  4DN2 A;  2FRE A;  4BN6 A;  1V5Z A;  3BM2 A;  3E10 A;  5J6C A;  1YWQ A;  1J6R A;  5HDJ A;  2BKJ A;  3HOI A;  2ISK A;  5HEI A;  3EK3 A;  2H0U A;  2B67 A;  3KOQ A;  1YKI A;  4TTC A;  1OO6 A;  1ICV A;  4BN7 A;  3HZN A;  3H4O A;  3OF4 A;  1IDT A;  3X22 A;  3TO0 A;  1BKJ A;  3GE5 A;  2HAY A;  2WZV A;  1V5Y A;  1F5V A;  2IFA A; 
#chains in the Genus database with same CATH homology
 1YLR A;  3EO8 A;  1VFR A;  3GB5 A;  3PXV A;  1OON A;  4XOQ A;  2YMV A;  1ICU A;  1KQC A;  1ICR A;  3N2S A;  4QLX A;  3GR3 A;  1KQB A;  3QDL A;  4XOM A;  3K6H A;  1NEC A;  3BEM A;  3GH8 A;  4URP A;  4QLY A;  2I7H A;  3GBH A;  1OOQ A;  1ZCH A;  3G14 A;  4BN9 A;  2R01 A;  3X21 A;  4G8S A;  4EO3 A;  4BNB A;  3GE6 A;  1YLU A;  2ISJ A;  3E39 A;  3KWK A;  3GAG A;  3EOF A;  5KRD A;  2ISL A;  3M5K A;  5KO7 A;  1OO5 A;  2WQF A;  1VKW A;  1KQD A;  3GFD A;  3GFA A;  1DS7 A;  4BN8 A;  4XOO A;  5KO8 A;  3EO7 A;  2WZW A;  3TNZ A;  4TTB A;  3BM1 A;  1NOX A;  3HJ9 A;  4DN2 A;  2FRE A;  4BN6 A;  1V5Z A;  3BM2 A;  3E10 A;  5J6C A;  1YWQ A;  1J6R A;  5HDJ A;  2BKJ A;  3HOI A;  2ISK A;  5HEI A;  3EK3 A;  2H0U A;  2B67 A;  3KOQ A;  1YKI A;  4TTC A;  1OO6 A;  1ICV A;  4BN7 A;  3HZN A;  3H4O A;  3OF4 A;  1IDT A;  3X22 A;  3TO0 A;  1BKJ A;  3GE5 A;  2HAY A;  2WZV A;  1V5Y A;  1F5V A;  2IFA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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