3ZC7A

Vbht fic protein from bartonella schoenbuchensis in complex with vbha antitoxin and atp
Total Genus 73
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
73
sequence length
199
structure length
199
Chain Sequence
NDPYTDPETGVMYNLLGIKDQARLERVESAFAYIRSFELGRTSISGKFDLDHMKKIHKKLFGDVYEWAGKTRLVDIVKDNSKFAHYTQIESYAPQITQQLAREQHLRGLDANEFSQRAGYYMGELNALHPFREGNGRTLREFIWQLAREAGYHIDWDRVERQEMTRASIESYYGNSDLMSALIRRNLTEFTVNRRVDVS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Conserved Inhibitory Mechanism and Competent ATP Binding Mode for Adenylyltransferases with Fic Fold.
pubmed doi rcsb
source organism Bartonella schoenbuchensis
molecule tags Transferase/antitoxin
molecule keywords ADENOSINE MONOPHOSPHATE-PROTEIN TRANSFERASE VBHT
total genus 73
structure length 199
sequence length 199
ec nomenclature ec 2.7.7.n1: Protein adenylyltransferase.
pdb deposition date 2012-11-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02661 Fic Fic/DOC family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.3290.10 Mainly Alpha Orthogonal Bundle Fic-like fold Fido-like domain 3zc7A00
3SE5A 4X2EA 3ZLMA 2VY3A 5JJ6A 3SHGA 2VZAA 3LETA 3S6AA 4X2CA 4PY3A 4U07A 3N3UA 4U04A 5CMTA 5JFZA 2G03A 5EU0A 4ITRA 4U0UA 5JFFA 4XI8A 2JK8A 4M16A 3CUCA 4U0SA 4NPSA 5CKLA 5JJ7A 4N67A 3ZCBA 5CGLA 4U0ZA 4WGJA 3ZC7A 4LU4A 3SN9A 4X2DA 2F6SA
chains in the Genus database with same CATH superfamily
3SE5A 4X2EA 3ZLMA 2VY3A 5JJ6A 3SHGA 2VZAA 3LETA 3S6AA 4X2CA 4PY3A 4U07A 3N3UA 4U04A 5CMTA 5JFZA 2G03A 5EU0A 4ITRA 4U0UA 1NH1A 5JFFA 2NUNA 4XI8A 2JK8A 4M16A 3CUCA 4NPSA 4U0SA 5CKLA 5JJ7A 4N67A 3ZCBA 5CGLA 2NUDA 4U0ZA 4WGJA 3ZC7A 4LU4A 3SN9A 4X2DA 2F6SA
chains in the Genus database with same CATH topology
3SE5A 4X2EA 3ZLMA 2VY3A 5JJ6A 3SHGA 2VZAA 3LETA 3S6AA 4X2CA 4PY3A 4U07A 3N3UA 4U04A 5CMTA 5JFZA 2G03A 5EU0A 4ITRA 4U0UA 5JFFA 4XI8A 2JK8A 4M16A 3CUCA 4U0SA 4NPSA 5CKLA 5JJ7A 4N67A 3ZCBA 5CGLA 4U0ZA 4WGJA 3ZC7A 4LU4A 3SN9A 4X2DA 2F6SA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3SE5 A;  4X2E A;  3ZLM A;  2VY3 A;  5JJ6 A;  3SHG A;  2VZA A;  3LET A;  3S6A A;  4X2C A;  4PY3 A;  4U07 A;  3N3U A;  4U04 A;  5CMT A;  5JFZ A;  2G03 A;  5EU0 A;  4ITR A;  4U0U A;  5JFF A;  4XI8 A;  2JK8 A;  4M16 A;  3CUC A;  4U0S A;  4NPS A;  5CKL A;  5JJ7 A;  4N67 A;  3ZCB A;  5CGL A;  4U0Z A;  4WGJ A;  3ZC7 A;  4LU4 A;  3SN9 A;  4X2D A;  2F6S A; 
#chains in the Genus database with same CATH topology
 3SE5 A;  4X2E A;  3ZLM A;  2VY3 A;  5JJ6 A;  3SHG A;  2VZA A;  3LET A;  3S6A A;  4X2C A;  4PY3 A;  4U07 A;  3N3U A;  4U04 A;  5CMT A;  5JFZ A;  2G03 A;  5EU0 A;  4ITR A;  4U0U A;  1NH1 A;  5JFF A;  2NUN A;  4XI8 A;  2JK8 A;  4M16 A;  3CUC A;  4NPS A;  4U0S A;  5CKL A;  5JJ7 A;  4N67 A;  3ZCB A;  5CGL A;  2NUD A;  4U0Z A;  4WGJ A;  3ZC7 A;  4LU4 A;  3SN9 A;  4X2D A;  2F6S A; 
#chains in the Genus database with same CATH homology
 3SE5 A;  4X2E A;  3ZLM A;  2VY3 A;  5JJ6 A;  3SHG A;  2VZA A;  3LET A;  3S6A A;  4X2C A;  4PY3 A;  4U07 A;  3N3U A;  4U04 A;  5CMT A;  5JFZ A;  2G03 A;  5EU0 A;  4ITR A;  4U0U A;  5JFF A;  4XI8 A;  2JK8 A;  4M16 A;  3CUC A;  4U0S A;  4NPS A;  5CKL A;  5JJ7 A;  4N67 A;  3ZCB A;  5CGL A;  4U0Z A;  4WGJ A;  3ZC7 A;  4LU4 A;  3SN9 A;  4X2D A;  2F6S A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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