3ZLMA

Fic protein from neisseria meningitidis mutant e186g in complex with amppnp
Total Genus 69
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
177
structure length
177
Chain Sequence
SIDEQSLHNARRLFESGDIDRIEVGTTAGLQQIHRYLFGGLYDFAGQIREDNISKGGFRFANAMYLKEALVKIEQMPERTFEEIIAKYVEMNIAHPFLEGNGRSTRIWLDLVLKKNLKKVVNWQNVSKTLYLQAMERSPVNDLELRFLLKDNLTDDVDNREIIFKGIEQSYYYGGYE
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Conserved Inhibitory Mechanism and Competent ATP Binding Mode for Adenylyltransferases with Fic Fold.
pubmed doi rcsb
source organism Neisseria meningitidis
molecule tags Transferase
molecule keywords ADENOSINE MONOPHOSPHATE-PROTEIN TRANSFERASE NMFIC
total genus 69
structure length 177
sequence length 177
ec nomenclature ec 2.7.7.n1: Protein adenylyltransferase.
pdb deposition date 2013-02-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02661 Fic Fic/DOC family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.3290.10 Mainly Alpha Orthogonal Bundle Fic-like fold Fido-like domain 3zlmA00
5JJ6A 4PY3A 5JFZA 4WGJA 4X2EA 3SN9A 2VY3A 4U04A 3ZCBA 3N3UA 3SHGA 5EU0A 3ZLMA 3CUCA 5JFFA 3SE5A 5CKLA 2G03A 4M16A 4X2CA 4XI8A 4N67A 4LU4A 4U0SA 4NPSA 4U07A 2VZAA 4ITRA 4U0ZA 4X2DA 5CGLA 3LETA 3ZC7A 3S6AA 5JJ7A 4U0UA 2JK8A 2F6SA 5CMTA
chains in the Genus database with same CATH superfamily
5JJ6A 4PY3A 5JFZA 4WGJA 1NH1A 4X2EA 3SN9A 2VY3A 4U04A 3ZCBA 3N3UA 3SHGA 5EU0A 3ZLMA 3CUCA 5JFFA 3SE5A 5CKLA 2G03A 4M16A 2NUNA 4X2CA 4XI8A 4N67A 4LU4A 4U0SA 4NPSA 2NUDA 2VZAA 4U07A 4ITRA 4U0ZA 4X2DA 5CGLA 3LETA 3ZC7A 3S6AA 5JJ7A 4U0UA 2JK8A 2F6SA 5CMTA
chains in the Genus database with same CATH topology
5JJ6A 4PY3A 5JFZA 4WGJA 4X2EA 3SN9A 2VY3A 4U04A 3ZCBA 3N3UA 3SHGA 5EU0A 3ZLMA 3CUCA 5JFFA 3SE5A 5CKLA 2G03A 4M16A 4X2CA 4XI8A 4N67A 4LU4A 4U0SA 4NPSA 4U07A 2VZAA 4ITRA 4U0ZA 4X2DA 5CGLA 3LETA 3ZC7A 3S6AA 5JJ7A 4U0UA 2JK8A 2F6SA 5CMTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5JJ6 A;  4PY3 A;  5JFZ A;  4WGJ A;  4X2E A;  3SN9 A;  2VY3 A;  4U04 A;  3ZCB A;  3N3U A;  3SHG A;  5EU0 A;  3ZLM A;  3CUC A;  5JFF A;  3SE5 A;  5CKL A;  2G03 A;  4M16 A;  4X2C A;  4XI8 A;  4N67 A;  4LU4 A;  4U0S A;  4NPS A;  4U07 A;  2VZA A;  4ITR A;  4U0Z A;  4X2D A;  5CGL A;  3LET A;  3ZC7 A;  3S6A A;  5JJ7 A;  4U0U A;  2JK8 A;  2F6S A;  5CMT A; 
#chains in the Genus database with same CATH topology
 5JJ6 A;  4PY3 A;  5JFZ A;  4WGJ A;  1NH1 A;  4X2E A;  3SN9 A;  2VY3 A;  4U04 A;  3ZCB A;  3N3U A;  3SHG A;  5EU0 A;  3ZLM A;  3CUC A;  5JFF A;  3SE5 A;  5CKL A;  2G03 A;  4M16 A;  2NUN A;  4X2C A;  4XI8 A;  4N67 A;  4LU4 A;  4U0S A;  4NPS A;  2NUD A;  2VZA A;  4U07 A;  4ITR A;  4U0Z A;  4X2D A;  5CGL A;  3LET A;  3ZC7 A;  3S6A A;  5JJ7 A;  4U0U A;  2JK8 A;  2F6S A;  5CMT A; 
#chains in the Genus database with same CATH homology
 5JJ6 A;  4PY3 A;  5JFZ A;  4WGJ A;  4X2E A;  3SN9 A;  2VY3 A;  4U04 A;  3ZCB A;  3N3U A;  3SHG A;  5EU0 A;  3ZLM A;  3CUC A;  5JFF A;  3SE5 A;  5CKL A;  2G03 A;  4M16 A;  4X2C A;  4XI8 A;  4N67 A;  4LU4 A;  4U0S A;  4NPS A;  4U07 A;  2VZA A;  4ITR A;  4U0Z A;  4X2D A;  5CGL A;  3LET A;  3ZC7 A;  3S6A A;  5JJ7 A;  4U0U A;  2JK8 A;  2F6S A;  5CMT A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...