3ZXNA

Moorella thermoacetica rsbs s58e
Total Genus 36
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
36
sequence length
118
structure length
117
Chain Sequence
SRVPILKVDDYWVVAIEETLDQSVIQFKEELLHNITGVAGKGLVIDISALEVVDEFVTRVLIEISRLAELLGLPFVLTGIKPAVAITLTEMGLDLRGMATALNLQKGLDKLKNLARM
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
molecule keywords ANTI-SIGMA-FACTOR ANTAGONIST (STAS) DOMAIN PROTEIN
publication title The Bacterial Stressosome: A Modular System that Has Been Adapted to Control Secondary Messenger Signaling.
pubmed doi rcsb
source organism Moorella thermoacetica
total genus 36
structure length 117
sequence length 118
chains with identical sequence B
ec nomenclature
pdb deposition date 2011-08-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01740 STAS STAS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.24 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA STAS domain 3zxnA00
3T6OA 3F43A 3AGDA 5EUZA 5EUWA 5EUSA 3IF5A 1TILB 1BUZA 4QTPA 2VY9A 1SBOA 1TH8B 1VC1A 3IHAA 1H4XA 3OIZA 1AUZA 3ZXNA 4XS5A 5EZBA 3LLOA 4HYLA 3NY7A 3LKLA 3IHBA 2KA5A 1T6RA 3IH8A 1H4YA 4DGFA 5EUUA 1THNB 3OIRA 3MGLA 1TIDB 1H4ZA 2KLNA 5EUXA 4DGHA 3IH9A 3AGEA 3ZTBA
chains in the Genus database with same CATH superfamily
3T6OA 3GHFA 1BUZA 1SBOA 1FC7A 3GVLA 3JU4A 2CWWA 4HYLA 3D03A 2KA5A 4DMGA 1T6RA 3DORA 4L8KA 1H4YA 4JC0A 3D3UA 2AS0A 1TIDB 3K50A 1WXWA 3ZTBA 3V97A 3F43A 1WXXA 5EUZA 5EUWA 2B78A 1V0FA 3MOGA 2DXNA 1AUZA 3OIZA 4XS5A 3NY7A 3IHBA 2ZO9B 4DGFA 3GVKA 5EUUA 4GHNA 3MGLA 3GVJA 3GK7A 4L1CA 2KLNA 3DJAA 1HF2A 2DXLA 3AGDA 5EUSA 3IF5A 3LDFA 4QTPA 2VY9A 3DUPA 1FCFA 2ZOAA 3IHAA 3QDQA 1BPLA 5EZBA 1K32A 2OASA 1FC9A 1FC6A 1THNB 4DGHA 3IH9A 3VSEA 1TILB 1J7XA 3EH7A 1TH8B 4AE2A 1VC1A 1H4XA 3ZXNA 4HIZA 3LLOA 1N6FA 3LKLA 1V0EA 3V8VA 3IH8A 3GMFA 1N6EA 3OIRA 1N6DA 2RRLA 4AEJA 1H4ZA 5EUXA 3C0KA 3AGEA
chains in the Genus database with same CATH topology
3T6OA 3F43A 3AGDA 5EUZA 5EUWA 5EUSA 3IF5A 1TILB 1BUZA 4QTPA 2VY9A 1SBOA 1TH8B 1VC1A 3IHAA 1H4XA 3OIZA 1AUZA 3ZXNA 4XS5A 5EZBA 3LLOA 4HYLA 3NY7A 3LKLA 3IHBA 2KA5A 1T6RA 3IH8A 1H4YA 4DGFA 5EUUA 1THNB 3OIRA 3MGLA 1TIDB 1H4ZA 2KLNA 5EUXA 4DGHA 3IH9A 3AGEA 3ZTBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3T6O A;  3F43 A;  3AGD A;  5EUZ A;  5EUW A;  5EUS A;  3IF5 A;  1TIL B;  1BUZ A;  4QTP A;  2VY9 A;  1SBO A;  1TH8 B;  1VC1 A;  3IHA A;  1H4X A;  3OIZ A;  1AUZ A;  3ZXN A;  4XS5 A;  5EZB A;  3LLO A;  4HYL A;  3NY7 A;  3LKL A;  3IHB A;  2KA5 A;  1T6R A;  3IH8 A;  1H4Y A;  4DGF A;  5EUU A;  1THN B;  3OIR A;  3MGL A;  1TID B;  1H4Z A;  2KLN A;  5EUX A;  4DGH A;  3IH9 A;  3AGE A;  3ZTB A; 
#chains in the Genus database with same CATH topology
 3T6O A;  3GHF A;  1BUZ A;  1SBO A;  1FC7 A;  3GVL A;  3JU4 A;  2CWW A;  4HYL A;  3D03 A;  2KA5 A;  4DMG A;  1T6R A;  3DOR A;  4L8K A;  1H4Y A;  4JC0 A;  3D3U A;  2AS0 A;  1TID B;  3K50 A;  1WXW A;  3ZTB A;  3V97 A;  3F43 A;  1WXX A;  5EUZ A;  5EUW A;  2B78 A;  1V0F A;  3MOG A;  2DXN A;  1AUZ A;  3OIZ A;  4XS5 A;  3NY7 A;  3IHB A;  2ZO9 B;  4DGF A;  3GVK A;  5EUU A;  4GHN A;  3MGL A;  3GVJ A;  3GK7 A;  4L1C A;  2KLN A;  3DJA A;  1HF2 A;  2DXL A;  3AGD A;  5EUS A;  3IF5 A;  3LDF A;  4QTP A;  2VY9 A;  3DUP A;  1FCF A;  2ZOA A;  3IHA A;  3QDQ A;  1BPL A;  5EZB A;  1K32 A;  2OAS A;  1FC9 A;  1FC6 A;  1THN B;  4DGH A;  3IH9 A;  3VSE A;  1TIL B;  1J7X A;  3EH7 A;  1TH8 B;  4AE2 A;  1VC1 A;  1H4X A;  3ZXN A;  4HIZ A;  3LLO A;  1N6F A;  3LKL A;  1V0E A;  3V8V A;  3IH8 A;  3GMF A;  1N6E A;  3OIR A;  1N6D A;  2RRL A;  4AEJ A;  1H4Z A;  5EUX A;  3C0K A;  3AGE A; 
#chains in the Genus database with same CATH homology
 3T6O A;  3F43 A;  3AGD A;  5EUZ A;  5EUW A;  5EUS A;  3IF5 A;  1TIL B;  1BUZ A;  4QTP A;  2VY9 A;  1SBO A;  1TH8 B;  1VC1 A;  3IHA A;  1H4X A;  3OIZ A;  1AUZ A;  3ZXN A;  4XS5 A;  5EZB A;  3LLO A;  4HYL A;  3NY7 A;  3LKL A;  3IHB A;  2KA5 A;  1T6R A;  3IH8 A;  1H4Y A;  4DGF A;  5EUU A;  1THN B;  3OIR A;  3MGL A;  1TID B;  1H4Z A;  2KLN A;  5EUX A;  4DGH A;  3IH9 A;  3AGE A;  3ZTB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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