The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
15
|
sequence length |
65
|
structure length |
64
|
Chain Sequence |
SDFVVIKALEDGVNVIGTRGADTRFHHSEKLDKGEVLIAQFTEHTSAIKVRGKAYIQTRHGVIE
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
How to Change the Oligomeric State of a Circular Protein Assembly: Switch from 11-Subunit to 12-Subunit Trap Suggests a General Mechanism
pubmed doi rcsb |
| molecule keywords |
TRANSCRIPTION ATTENUATION PROTEIN MTRB
|
| molecule tags |
Transcription
|
| source organism |
Geobacillus stearothermophilus
|
| total genus |
15
|
| structure length |
64
|
| sequence length |
65
|
| chains with identical sequence |
B, C, D, E, F, G, H, I
|
| ec nomenclature | |
| pdb deposition date | 2011-09-02 |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Beta | Sandwich | Immunoglobulin-like | TRAP-like |
