3GTOC

Backtracked rna polymerase ii complex with 15mer rna
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription, transferase/dna-rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
total genus 41
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtoC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtoC01
1WCMK 2Y0SD 2WB1D 5TMCA 3K7AK 4C2MK 1R9TK 4A3MC 1SFOK 4A3GK 4XLPA 1YNNA 4BBRK 3GTLK 1XPPA 3S16K 3DXJA 2PPBA 4YFKA 2NVQC 5IYBC 1HQMA 3M3YC 2YU9C 3GTPC 3HOYC 4A3CK 1I6HK 1I50C 4YFNA 3HOZK 3I4NK 3HKZD 3S2HC 4C3IK 4OIRA 4A3FC 5M3FK 3HOXC 2PA8D 5IP7K 3HOWK 3H3VD 4MEYA 5IYCC 5D4DA 1I3QK 3M4OK 2WAQD 3WODA 5TMFA 2A68A 3CQZC 4A3JC 4LLGA 2E2JC 1TWGC 4OIQA 3GTOC 5C3EK 3RZDK 5M5YK 1BDFA 4GZYA 3S17K 3GTKK 4A3IC 4A3EC 3S2DK 3HOVC 3RZOC 4A3MK 5C44K 2PMZD 2E2IC 4A3BK 1TWHC 4YG2A 1TWCK 2R92C 5FLMC 3H0GC 3S1NK 4BXXC 4Q5SA 4QJVA 4BY7C 3S14K 4AYBD 4Y7NC 2YU9K 4BY1K 2B63K 3HOYK 5C4XC 4XSXA 4C3JC 4ZH4A 4KN4A 3GTMK 5IYDC 3S1QC 2NVXC 4A3FK 3EQLA 5M5WK 3HOXK 2JA6K 2A6EA 3I4MK 4A3DK 1K83C 2E2JK 4G7ZA 2JA5K 4Q4ZA 2Y0SL 2WB1L 1Y1WK 1IW7A 4X6AK 4OINA 3GTQC 2JA8K 2O5IA 4A3IK 4A3EK 5M3MK 3GTGK 3HOVK 3S1MC 4Y52C 3GTJC 4A3LK 3S15C 2R93K 2JA7K 3PO3C 4G7OA 1Y1VK 4LK1A 5C4JC 1WCMC 3FKIC 1I6VA 3K7AC 4QIWD 4C2MC 1R9TC 1TWFC 1SFOC 3PO2C 4A3GC 4BBRC 4NOIA 1ZYRA 2O5JA 3HOUC 3S16C 3HKZL 5C4XK 2NVQK 3S1RC 4C3JK 2PA8L 5IYBK 3S2DC 4YFXA 3GTPK 3H3VL 3M3YK 1I50K 2WAQL 4A3CC 2R7ZC 2NVYC 1TWAC 4OIOA 3S1QK 3HOZC 3I4NC 2CW0A 4A3KC 3S2HK 4QJVB 1K83K 4A93C 4C3IC 4KMUA 3HOWC 5IYCK 1YNJA 4OIPA 5IP7C 3M4OC 2VUMC 2PMZL 4BBSC 4A3JK 3CQZK 5IP9C 3GTQK 3GTOK 1TWGK 3RZDC 3S1MK 5C3EC 4C3HC 2E2HC 4Y52K 3S17C 3PO3K 4MQ9A 4XLNA 5C4JK 4AYBL 1SMYA 3FKIK 3RZOK 2E2IK 3PO2K 5C44C 1TWFK 2NVTC 4A3BC 1TWHK 2R92K 5FLMK 3H0GK 1TWCC 3HOUK 2A69A 4BXXK 3S1NC 4XSZA 3GTLC 5M5XK 3S1RK 4BY7K 4LK0A 3S14C 4G7HA 4Y7NK 2BE5A 2B63C 4BY1C 2R7ZK 2NVYK 1TWAK 4JK1A 4A3KK 5IYDK 3GTMC 4A93K 1I6HC 2NVXK 4KN7A 3I4MC 2JA6C 4A3DC 2VUMK 4BBSK 5IP9K 2JA5C 2A6HA 1Y1WC 4X6AC 4QIWL 1I3QC 4C3HK 2E2HK 2JA8C 4LJZA 3GTJK 3GTGC 3S15K 2R93C 4A3LC 3GTKC 2NVTK 4MEXA 5FJ8K 2JA7C 1Y1VC
chains in the Genus database with same CATH superfamily
3V4GA 5TMCA 1VLOA 3GEIA 4BLBA 1WSVA 2ZJRS 3GTLK 1FEUA 1BJTA 3FOEA 3AQOA 1WOSA 5L46A 3M3YC 1USMA 3TFJA 3HOYC 1C0AA 2PHCB 3HKZD 5HL7S 1KQ4A 4OIRA 5IP7K 3G4CA 4GTAA 3AD9C 4KARA 4LLGA 3RZDK 1AB4A 1F93A 1WQGA 5M5YK 1TWFA 3AH5A 1WSRA 3N3YA 2D6FC 2KWAA 3MMLB 3L4JA 3H0GA 3S2DK 3RZOC 1USOA 2PMZD 1XXAA 4YG2A 1L0WA 5JVGS 3H0GC 3S1NK 4Q5SA 2ZUFA 4Y7NC 5DM6S 1O26A 3SZYA 4XSXA 1O25A 4ZH4A 1VRQC 1F7VA 4A3FK 4PABA 3HOXK 5TJ3A 3TFHA 2RH6A 2E2JK 4G7ZA 1J6XA 1IW7A 1IBAA 3GTQC 4A3IK 4A3EK 1B4AA 3HOVK 2R93K 3HXAA 3S15C 2JA7K 4G7OA 2JH3A 5JVOA 5C4JC 1I6VA 3K7AC 1R9TC 3PO2C 1JVIA 1ZYRA 2GAHC 2O5JA 2NVQK 4C3JK 5IYBK 1VGXA 1I50K 2WAQL 4OIOA 3HOZC 3I4NC 3S2HK 4A93C 4C3IC 3TTGA 4KMUA 3IPJA 4KC6A 3HOWC 5IYCK 4OIPA 3GTKA 3M4OC 2VUMC 3GTOK 4BBSC 2FQOA 2ZUEA 3S1MK 5C3EC 4MQ9A 3TFIA 4AYBL 1SMYA 3FKIK 2E2IK 2NVTC 4A3BC 1TWHK 1O2FB 5FLMK 2YU9A 1F7UA 2B63A 4BXXK 2A69A 3A8KA 3ADAC 4LQYA 3GTMA 1ZQ1C 4LK0A 3S14C 4WFAS 2B63C 2R7ZK 4A3KK 4P5BA 3GTMC 1UV7A 1XXBA 1I6HC 2NVXK 4BLAA 4A3DC 1ZXOA 3GTGA 2KXYA 4X6AC 4QIWL 3SZZA 4C3HK 2JA8C 1TWHA 1BGWA 2Y3PA 3GTGC 4A3LC 3AQPA 5FJ8K 2Y0SD 3L4KA 1YNNA 1ZBSA 4BBRK 3VA7A 2PPBA 1K83A 4A3CK 1EFWA 4KMAA 1F9NA 1TWGA 5D4DA 1I3QK 4GTFA 4OIQA 5TMFA 4LOWA 1TWGC 1BDFA 4GZYA 3S17K 2FQTA 4DDQA 5EGHA 3FHZA 2NVYA 1TWAA 3GIRA 5IORA 3OPFA 3HOYK 4KN4A 5IYDC 5IOQA 2E2HA 2JA6K 3G4AA 2JA5K 1X31C 1Y1WK 1ISEA 2CFAA 3GTLA 4KAWX 4KB2A 5IOSA 1TWFC 4GTDA 3HKZL 2XCOA 1O29A 1XZPB 3S1RC 2JA6A 3PIOS 3GTPK 1RU0A 2L3UA 4QJVB 3A8JA 4GTEA 5CHPA 5IP7C 3GTQK 4BKWA 4IO9S 2PMZL 1ZVUA 3CQZK 4A3JK 3RZDC 2ZJPS 1V5VA 4KATA 4KM9A 5C4JK 4KASA 5HL8A 3N0BA 3PO2K 3BUEA 5CJ9A 3AD8C 1G51A 2R92K 4WFNS 4IOAS 3S1NC 5M5XK 4BY7K 3Q3QA 1PJ5A 3GSIA 1DCHA 4A93K 5IOTA 5E68A 1WIHA 2VUMK 4BBSK 2R93A 2V6UA 2JA7A 2P5MA 4LJZA 3GTJK 2R93C 3GTKC 2NVTK 4J3NA 2JA7C 1WCMK 2WB1D 4C2MK 4WJ4A 1SFOK 4A3MC 2GSUA 4XLPA 4A3GK 1XZQB 3S16K 1I50A 1YCLA 2NVQC 5IYBC 1HQMA 3LPXA 2YU9C 3OREA 4WILA 1I6HK 1I50C 1IQ0A 1JQWA 3GTOA 3S2HC 4KMDA 2PA8D 2KPUA 3H3VD 5IYCC 1WQFA 3T00A 3GTOC 2A68A 1WCMA 3FKIA 2GSOA 2E2IA 1SFOA 3FOFA 5C44K 2E2IC 4M1XA 1DCOA 1TWHC 1TWCK 3NUHA 2XCQA 5FLMC 2R7ZA 4BXXC 3OEPA 4G0WA 4LR2A 1O27A 2NVXA 4BY1K 5C4XC 1XXCA 1WOOA 2GAGC 1J98A 2V6SA 4G0VA 3S1QC 2NVXC 3I4MK 1O24A 3A8IA 5M5WK 2A6EA 1K83C 4Q4ZA 2Y0SL 4GTCA 1J6VA 4GT9A 4AH6A 5M3MK 4Y52C 3PO3C 1Y1VK 4LK1A 4U67S 4BBRC 4NOIA 4WFBS 3HOUC 1EQRA 1O2AA 3M3YK 4A3CC 4GFQA 2NVYC 1TWAC 1I3QA 4RMFA 1YNJA 5IP9C 4FM9A 5HQHA 3T01A 2E2HC 3AD7C 2P8TA 3S17C 3BP8C 3JSTA 4G0UA 3RZOK 1O28A 4WJ3M 1TWFK 3H0GK 1WOPA 4XSZA 3GTLC 3S1RK 4Y7NK 4G7HA 4GTBA 3LAPA 2L5NA 2JA5A 3LAJA 1Y1WA 4KN7A 2JA6C 2JA5C 1Y1WC 3GEHA 2ZFZA 4XCHA 1WQHA 5JFEA 3S15K 3CAGA 4MEXA 4ILDA 3S2DC 3K7AK 1R9TK 3T02A 1VH2A 3GTPA 1XPPA 2EBBA 3DXJA 2XCRB 4YFKA 3GTPC 4YFNA 1EK8A 3HOZK 3I4NK 3GTQA 4KM8A 3CQZA 4PAAA 4C3IK 2GSNA 4A3FC 5M3FK 3HOXC 3HOWK 3M4OK 4MEYA 2WAQD 3WODA 4A3JC 2E2JC 3CQZC 5EGEA 5C3EK 1R9TA 5DM7S 1WORA 3GTKK 4A3IC 2R92A 4A3EC 3LYWA 1XZPA 3HOVC 4A3MK 1JOEA 1YX2A 4A3BK 5JVHS 1VJEA 2R92C 1IS1A 4WCES 1EH1A 4FZBA 4QJVA 4GTLA 4WF9S 4BY7C 3S14K 4AYBD 2YU9K 2B63K 4C3JC 3GTMK 2VUMA 3EQLA 4A3DK 3GTJA 2WB1L 4X6AK 4OINA 2W7VA 2JA8K 2O5IA 1IE0A 3ERED 3QX3A 3GTGK 3S1MC 4A3LK 3GTJC 4P9SA 4C45A 1WCMC 3FKIC 4IOCS 4C2MC 4QIWD 1SFOC 4A3GC 1HI9A 3S16C 4KMHA 3CF5S 5C4XK 2PA8L 4YFXA 3H3VL 2KQ1A 3S1QK 2R7ZC 2CW0A 4A3KC 1DCPA 1K83K 3GEEA 1EI6A 1INNA 1TWGK 2V6TA 1PJ7A 4Y52K 4C3HC 3S0XA 1XZQA 3PO3K 1TWCA 4KB4A 4XLNA 1B4BA 5C44C 1O2BA 1TWCC 3HOUK 1PJ6A 2CFAB 4KDDA 2BE5A 1IL2A 4BY1C 1GE9A 2NVYK 1TWAK 4JK1A 2ZJQS 5IYDK 3N0CA 3GDZA 3PIPS 3BP3A 3I4MC 4P5AA 5IP9K 3DLLS 2A6HA 2E2HK 1DD5A 4O2DA 1I3QC 1Y1VA 1BS2A 1J6WA 2RGRA 1Y1VC
chains in the Genus database with same CATH topology
1WCMK 2Y0SD 2WB1D 5TMCA 3K7AK 4C2MK 1R9TK 4A3MC 1SFOK 4A3GK 4XLPA 1YNNA 4BBRK 3GTLK 1XPPA 3S16K 3DXJA 2PPBA 4YFKA 2NVQC 5IYBC 1HQMA 3M3YC 2YU9C 3GTPC 3HOYC 4A3CK 1I6HK 1I50C 4YFNA 3HOZK 3I4NK 3HKZD 3S2HC 4C3IK 4OIRA 4A3FC 5M3FK 3HOXC 2PA8D 5IP7K 3HOWK 3H3VD 4MEYA 5IYCC 5D4DA 1I3QK 3M4OK 2WAQD 3WODA 5TMFA 2A68A 3CQZC 4A3JC 4LLGA 2E2JC 1TWGC 4OIQA 3GTOC 5C3EK 3RZDK 5M5YK 1BDFA 4GZYA 3S17K 3GTKK 4A3IC 4A3EC 3S2DK 3HOVC 3RZOC 4A3MK 5C44K 2PMZD 2E2IC 4A3BK 1TWHC 4YG2A 1TWCK 2R92C 5FLMC 3H0GC 3S1NK 4BXXC 4Q5SA 4QJVA 4BY7C 3S14K 4AYBD 4Y7NC 2YU9K 4BY1K 2B63K 3HOYK 5C4XC 4XSXA 4C3JC 4ZH4A 4KN4A 3GTMK 5IYDC 3S1QC 2NVXC 4A3FK 3EQLA 5M5WK 3HOXK 2JA6K 2A6EA 3I4MK 4A3DK 1K83C 2E2JK 4G7ZA 2JA5K 4Q4ZA 2Y0SL 2WB1L 1Y1WK 1IW7A 4X6AK 4OINA 3GTQC 2JA8K 2O5IA 4A3IK 4A3EK 5M3MK 3GTGK 3HOVK 3S1MC 4Y52C 3GTJC 4A3LK 3S15C 2R93K 2JA7K 3PO3C 4G7OA 1Y1VK 4LK1A 5C4JC 1WCMC 3FKIC 1I6VA 3K7AC 4QIWD 4C2MC 1R9TC 1TWFC 1SFOC 3PO2C 4A3GC 4BBRC 4NOIA 1ZYRA 2O5JA 3HOUC 3S16C 3HKZL 5C4XK 2NVQK 3S1RC 4C3JK 2PA8L 5IYBK 3S2DC 4YFXA 3GTPK 3H3VL 3M3YK 1I50K 2WAQL 4A3CC 2R7ZC 2NVYC 1TWAC 4OIOA 3S1QK 3HOZC 3I4NC 2CW0A 4A3KC 3S2HK 4QJVB 1K83K 4A93C 4C3IC 4KMUA 3HOWC 5IYCK 1YNJA 4OIPA 5IP7C 3M4OC 2VUMC 2PMZL 4BBSC 4A3JK 3CQZK 5IP9C 3GTQK 3GTOK 1TWGK 3RZDC 3S1MK 5C3EC 4C3HC 2E2HC 4Y52K 3S17C 3PO3K 4MQ9A 4XLNA 5C4JK 4AYBL 1SMYA 3FKIK 3RZOK 2E2IK 3PO2K 5C44C 1TWFK 2NVTC 4A3BC 1TWHK 2R92K 5FLMK 3H0GK 1TWCC 3HOUK 2A69A 4BXXK 3S1NC 4XSZA 3GTLC 5M5XK 3S1RK 4BY7K 4LK0A 3S14C 4G7HA 4Y7NK 2BE5A 2B63C 4BY1C 2R7ZK 2NVYK 1TWAK 4JK1A 4A3KK 5IYDK 3GTMC 4A93K 1I6HC 2NVXK 4KN7A 3I4MC 2JA6C 4A3DC 2VUMK 4BBSK 5IP9K 2JA5C 2A6HA 1Y1WC 4X6AC 4QIWL 1I3QC 4C3HK 2E2HK 2JA8C 4LJZA 3GTJK 3GTGC 3S15K 2R93C 4A3LC 3GTKC 2NVTK 4MEXA 5FJ8K 2JA7C 1Y1VC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1WCM K;  2Y0S D;  2WB1 D;  5TMC A;  3K7A K;  4C2M K;  1R9T K;  4A3M C;  1SFO K;  4A3G K;  4XLP A;  1YNN A;  4BBR K;  3GTL K;  1XPP A;  3S16 K;  3DXJ A;  2PPB A;  4YFK A;  2NVQ C;  5IYB C;  1HQM A;  3M3Y C;  2YU9 C;  3GTP C;  3HOY C;  4A3C K;  1I6H K;  1I50 C;  4YFN A;  3HOZ K;  3I4N K;  3HKZ D;  3S2H C;  4C3I K;  4OIR A;  4A3F C;  5M3F K;  3HOX C;  2PA8 D;  5IP7 K;  3HOW K;  3H3V D;  4MEY A;  5IYC C;  5D4D A;  1I3Q K;  3M4O K;  2WAQ D;  3WOD A;  5TMF A;  2A68 A;  3CQZ C;  4A3J C;  4LLG A;  2E2J C;  1TWG C;  4OIQ A;  3GTO C;  5C3E K;  3RZD K;  5M5Y K;  1BDF A;  4GZY A;  3S17 K;  3GTK K;  4A3I C;  4A3E C;  3S2D K;  3HOV C;  3RZO C;  4A3M K;  5C44 K;  2PMZ D;  2E2I C;  4A3B K;  1TWH C;  4YG2 A;  1TWC K;  2R92 C;  5FLM C;  3H0G C;  3S1N K;  4BXX C;  4Q5S A;  4QJV A;  4BY7 C;  3S14 K;  4AYB D;  4Y7N C;  2YU9 K;  4BY1 K;  2B63 K;  3HOY K;  5C4X C;  4XSX A;  4C3J C;  4ZH4 A;  4KN4 A;  3GTM K;  5IYD C;  3S1Q C;  2NVX C;  4A3F K;  3EQL A;  5M5W K;  3HOX K;  2JA6 K;  2A6E A;  3I4M K;  4A3D K;  1K83 C;  2E2J K;  4G7Z A;  2JA5 K;  4Q4Z A;  2Y0S L;  2WB1 L;  1Y1W K;  1IW7 A;  4X6A K;  4OIN A;  3GTQ C;  2JA8 K;  2O5I A;  4A3I K;  4A3E K;  5M3M K;  3GTG K;  3HOV K;  3S1M C;  4Y52 C;  3GTJ C;  4A3L K;  3S15 C;  2R93 K;  2JA7 K;  3PO3 C;  4G7O A;  1Y1V K;  4LK1 A;  5C4J C;  1WCM C;  3FKI C;  1I6V A;  3K7A C;  4QIW D;  4C2M C;  1R9T C;  1TWF C;  1SFO C;  3PO2 C;  4A3G C;  4BBR C;  4NOI A;  1ZYR A;  2O5J A;  3HOU C;  3S16 C;  3HKZ L;  5C4X K;  2NVQ K;  3S1R C;  4C3J K;  2PA8 L;  5IYB K;  3S2D C;  4YFX A;  3GTP K;  3H3V L;  3M3Y K;  1I50 K;  2WAQ L;  4A3C C;  2R7Z C;  2NVY C;  1TWA C;  4OIO A;  3S1Q K;  3HOZ C;  3I4N C;  2CW0 A;  4A3K C;  3S2H K;  4QJV B;  1K83 K;  4A93 C;  4C3I C;  4KMU A;  3HOW C;  5IYC K;  1YNJ A;  4OIP A;  5IP7 C;  3M4O C;  2VUM C;  2PMZ L;  4BBS C;  4A3J K;  3CQZ K;  5IP9 C;  3GTQ K;  3GTO K;  1TWG K;  3RZD C;  3S1M K;  5C3E C;  4C3H C;  2E2H C;  4Y52 K;  3S17 C;  3PO3 K;  4MQ9 A;  4XLN A;  5C4J K;  4AYB L;  1SMY A;  3FKI K;  3RZO K;  2E2I K;  3PO2 K;  5C44 C;  1TWF K;  2NVT C;  4A3B C;  1TWH K;  2R92 K;  5FLM K;  3H0G K;  1TWC C;  3HOU K;  2A69 A;  4BXX K;  3S1N C;  4XSZ A;  3GTL C;  5M5X K;  3S1R K;  4BY7 K;  4LK0 A;  3S14 C;  4G7H A;  4Y7N K;  2BE5 A;  2B63 C;  4BY1 C;  2R7Z K;  2NVY K;  1TWA K;  4JK1 A;  4A3K K;  5IYD K;  3GTM C;  4A93 K;  1I6H C;  2NVX K;  4KN7 A;  3I4M C;  2JA6 C;  4A3D C;  2VUM K;  4BBS K;  5IP9 K;  2JA5 C;  2A6H A;  1Y1W C;  4X6A C;  4QIW L;  1I3Q C;  4C3H K;  2E2H K;  2JA8 C;  4LJZ A;  3GTJ K;  3GTG C;  3S15 K;  2R93 C;  4A3L C;  3GTK C;  2NVT K;  4MEX A;  5FJ8 K;  2JA7 C;  1Y1V C; 
#chains in the Genus database with same CATH topology
 3V4G A;  5TMC A;  1VLO A;  3GEI A;  4BLB A;  1WSV A;  2ZJR S;  3GTL K;  1FEU A;  1BJT A;  3FOE A;  3AQO A;  1WOS A;  5L46 A;  3M3Y C;  1USM A;  3TFJ A;  3HOY C;  1C0A A;  2PHC B;  3HKZ D;  5HL7 S;  1KQ4 A;  4OIR A;  5IP7 K;  3G4C A;  4GTA A;  3AD9 C;  4KAR A;  4LLG A;  3RZD K;  1AB4 A;  1F93 A;  1WQG A;  5M5Y K;  1TWF A;  3AH5 A;  1WSR A;  3N3Y A;  2D6F C;  2KWA A;  3MML B;  3L4J A;  3H0G A;  3S2D K;  3RZO C;  1USO A;  2PMZ D;  1XXA A;  4YG2 A;  1L0W A;  5JVG S;  3H0G C;  3S1N K;  4Q5S A;  2ZUF A;  4Y7N C;  5DM6 S;  1O26 A;  3SZY A;  4XSX A;  1O25 A;  4ZH4 A;  1VRQ C;  1F7V A;  4A3F K;  4PAB A;  3HOX K;  5TJ3 A;  3TFH A;  2RH6 A;  2E2J K;  4G7Z A;  1J6X A;  1IW7 A;  1IBA A;  3GTQ C;  4A3I K;  4A3E K;  1B4A A;  3HOV K;  2R93 K;  3HXA A;  3S15 C;  2JA7 K;  4G7O A;  2JH3 A;  5JVO A;  5C4J C;  1I6V A;  3K7A C;  1R9T C;  3PO2 C;  1JVI A;  1ZYR A;  2GAH C;  2O5J A;  2NVQ K;  4C3J K;  5IYB K;  1VGX A;  1I50 K;  2WAQ L;  4OIO A;  3HOZ C;  3I4N C;  3S2H K;  4A93 C;  4C3I C;  3TTG A;  4KMU A;  3IPJ A;  4KC6 A;  3HOW C;  5IYC K;  4OIP A;  3GTK A;  3M4O C;  2VUM C;  3GTO K;  4BBS C;  2FQO A;  2ZUE A;  3S1M K;  5C3E C;  4MQ9 A;  3TFI A;  4AYB L;  1SMY A;  3FKI K;  2E2I K;  2NVT C;  4A3B C;  1TWH K;  1O2F B;  5FLM K;  2YU9 A;  1F7U A;  2B63 A;  4BXX K;  2A69 A;  3A8K A;  3ADA C;  4LQY A;  3GTM A;  1ZQ1 C;  4LK0 A;  3S14 C;  4WFA S;  2B63 C;  2R7Z K;  4A3K K;  4P5B A;  3GTM C;  1UV7 A;  1XXB A;  1I6H C;  2NVX K;  4BLA A;  4A3D C;  1ZXO A;  3GTG A;  2KXY A;  4X6A C;  4QIW L;  3SZZ A;  4C3H K;  2JA8 C;  1TWH A;  1BGW A;  2Y3P A;  3GTG C;  4A3L C;  3AQP A;  5FJ8 K;  2Y0S D;  3L4K A;  1YNN A;  1ZBS A;  4BBR K;  3VA7 A;  2PPB A;  1K83 A;  4A3C K;  1EFW A;  4KMA A;  1F9N A;  1TWG A;  5D4D A;  1I3Q K;  4GTF A;  4OIQ A;  5TMF A;  4LOW A;  1TWG C;  1BDF A;  4GZY A;  3S17 K;  2FQT A;  4DDQ A;  5EGH A;  3FHZ A;  2NVY A;  1TWA A;  3GIR A;  5IOR A;  3OPF A;  3HOY K;  4KN4 A;  5IYD C;  5IOQ A;  2E2H A;  2JA6 K;  3G4A A;  2JA5 K;  1X31 C;  1Y1W K;  1ISE A;  2CFA A;  3GTL A;  4KAW X;  4KB2 A;  5IOS A;  1TWF C;  4GTD A;  3HKZ L;  2XCO A;  1O29 A;  1XZP B;  3S1R C;  2JA6 A;  3PIO S;  3GTP K;  1RU0 A;  2L3U A;  4QJV B;  3A8J A;  4GTE A;  5CHP A;  5IP7 C;  3GTQ K;  4BKW A;  4IO9 S;  2PMZ L;  1ZVU A;  3CQZ K;  4A3J K;  3RZD C;  2ZJP S;  1V5V A;  4KAT A;  4KM9 A;  5C4J K;  4KAS A;  5HL8 A;  3N0B A;  3PO2 K;  3BUE A;  5CJ9 A;  3AD8 C;  1G51 A;  2R92 K;  4WFN S;  4IOA S;  3S1N C;  5M5X K;  4BY7 K;  3Q3Q A;  1PJ5 A;  3GSI A;  1DCH A;  4A93 K;  5IOT A;  5E68 A;  1WIH A;  2VUM K;  4BBS K;  2R93 A;  2V6U A;  2JA7 A;  2P5M A;  4LJZ A;  3GTJ K;  2R93 C;  3GTK C;  2NVT K;  4J3N A;  2JA7 C;  1WCM K;  2WB1 D;  4C2M K;  4WJ4 A;  1SFO K;  4A3M C;  2GSU A;  4XLP A;  4A3G K;  1XZQ B;  3S16 K;  1I50 A;  1YCL A;  2NVQ C;  5IYB C;  1HQM A;  3LPX A;  2YU9 C;  3ORE A;  4WIL A;  1I6H K;  1I50 C;  1IQ0 A;  1JQW A;  3GTO A;  3S2H C;  4KMD A;  2PA8 D;  2KPU A;  3H3V D;  5IYC C;  1WQF A;  3T00 A;  3GTO C;  2A68 A;  1WCM A;  3FKI A;  2GSO A;  2E2I A;  1SFO A;  3FOF A;  5C44 K;  2E2I C;  4M1X A;  1DCO A;  1TWH C;  1TWC K;  3NUH A;  2XCQ A;  5FLM C;  2R7Z A;  4BXX C;  3OEP A;  4G0W A;  4LR2 A;  1O27 A;  2NVX A;  4BY1 K;  5C4X C;  1XXC A;  1WOO A;  2GAG C;  1J98 A;  2V6S A;  4G0V A;  3S1Q C;  2NVX C;  3I4M K;  1O24 A;  3A8I A;  5M5W K;  2A6E A;  1K83 C;  4Q4Z A;  2Y0S L;  4GTC A;  1J6V A;  4GT9 A;  4AH6 A;  5M3M K;  4Y52 C;  3PO3 C;  1Y1V K;  4LK1 A;  4U67 S;  4BBR C;  4NOI A;  4WFB S;  3HOU C;  1EQR A;  1O2A A;  3M3Y K;  4A3C C;  4GFQ A;  2NVY C;  1TWA C;  1I3Q A;  4RMF A;  1YNJ A;  5IP9 C;  4FM9 A;  5HQH A;  3T01 A;  2E2H C;  3AD7 C;  2P8T A;  3S17 C;  3BP8 C;  3JST A;  4G0U A;  3RZO K;  1O28 A;  4WJ3 M;  1TWF K;  3H0G K;  1WOP A;  4XSZ A;  3GTL C;  3S1R K;  4Y7N K;  4G7H A;  4GTB A;  3LAP A;  2L5N A;  2JA5 A;  3LAJ A;  1Y1W A;  4KN7 A;  2JA6 C;  2JA5 C;  1Y1W C;  3GEH A;  2ZFZ A;  4XCH A;  1WQH A;  5JFE A;  3S15 K;  3CAG A;  4MEX A;  4ILD A;  3S2D C;  3K7A K;  1R9T K;  3T02 A;  1VH2 A;  3GTP A;  1XPP A;  2EBB A;  3DXJ A;  2XCR B;  4YFK A;  3GTP C;  4YFN A;  1EK8 A;  3HOZ K;  3I4N K;  3GTQ A;  4KM8 A;  3CQZ A;  4PAA A;  4C3I K;  2GSN A;  4A3F C;  5M3F K;  3HOX C;  3HOW K;  3M4O K;  4MEY A;  2WAQ D;  3WOD A;  4A3J C;  2E2J C;  3CQZ C;  5EGE A;  5C3E K;  1R9T A;  5DM7 S;  1WOR A;  3GTK K;  4A3I C;  2R92 A;  4A3E C;  3LYW A;  1XZP A;  3HOV C;  4A3M K;  1JOE A;  1YX2 A;  4A3B K;  5JVH S;  1VJE A;  2R92 C;  1IS1 A;  4WCE S;  1EH1 A;  4FZB A;  4QJV A;  4GTL A;  4WF9 S;  4BY7 C;  3S14 K;  4AYB D;  2YU9 K;  2B63 K;  4C3J C;  3GTM K;  2VUM A;  3EQL A;  4A3D K;  3GTJ A;  2WB1 L;  4X6A K;  4OIN A;  2W7V A;  2JA8 K;  2O5I A;  1IE0 A;  3ERE D;  3QX3 A;  3GTG K;  3S1M C;  4A3L K;  3GTJ C;  4P9S A;  4C45 A;  1WCM C;  3FKI C;  4IOC S;  4C2M C;  4QIW D;  1SFO C;  4A3G C;  1HI9 A;  3S16 C;  4KMH A;  3CF5 S;  5C4X K;  2PA8 L;  4YFX A;  3H3V L;  2KQ1 A;  3S1Q K;  2R7Z C;  2CW0 A;  4A3K C;  1DCP A;  1K83 K;  3GEE A;  1EI6 A;  1INN A;  1TWG K;  2V6T A;  1PJ7 A;  4Y52 K;  4C3H C;  3S0X A;  1XZQ A;  3PO3 K;  1TWC A;  4KB4 A;  4XLN A;  1B4B A;  5C44 C;  1O2B A;  1TWC C;  3HOU K;  1PJ6 A;  2CFA B;  4KDD A;  2BE5 A;  1IL2 A;  4BY1 C;  1GE9 A;  2NVY K;  1TWA K;  4JK1 A;  2ZJQ S;  5IYD K;  3N0C A;  3GDZ A;  3PIP S;  3BP3 A;  3I4M C;  4P5A A;  5IP9 K;  3DLL S;  2A6H A;  2E2H K;  1DD5 A;  4O2D A;  1I3Q C;  1Y1V A;  1BS2 A;  1J6W A;  2RGR A;  1Y1V C; 
#chains in the Genus database with same CATH homology
 1WCM K;  2Y0S D;  2WB1 D;  5TMC A;  3K7A K;  4C2M K;  1R9T K;  4A3M C;  1SFO K;  4A3G K;  4XLP A;  1YNN A;  4BBR K;  3GTL K;  1XPP A;  3S16 K;  3DXJ A;  2PPB A;  4YFK A;  2NVQ C;  5IYB C;  1HQM A;  3M3Y C;  2YU9 C;  3GTP C;  3HOY C;  4A3C K;  1I6H K;  1I50 C;  4YFN A;  3HOZ K;  3I4N K;  3HKZ D;  3S2H C;  4C3I K;  4OIR A;  4A3F C;  5M3F K;  3HOX C;  2PA8 D;  5IP7 K;  3HOW K;  3H3V D;  4MEY A;  5IYC C;  5D4D A;  1I3Q K;  3M4O K;  2WAQ D;  3WOD A;  5TMF A;  2A68 A;  3CQZ C;  4A3J C;  4LLG A;  2E2J C;  1TWG C;  4OIQ A;  3GTO C;  5C3E K;  3RZD K;  5M5Y K;  1BDF A;  4GZY A;  3S17 K;  3GTK K;  4A3I C;  4A3E C;  3S2D K;  3HOV C;  3RZO C;  4A3M K;  5C44 K;  2PMZ D;  2E2I C;  4A3B K;  1TWH C;  4YG2 A;  1TWC K;  2R92 C;  5FLM C;  3H0G C;  3S1N K;  4BXX C;  4Q5S A;  4QJV A;  4BY7 C;  3S14 K;  4AYB D;  4Y7N C;  2YU9 K;  4BY1 K;  2B63 K;  3HOY K;  5C4X C;  4XSX A;  4C3J C;  4ZH4 A;  4KN4 A;  3GTM K;  5IYD C;  3S1Q C;  2NVX C;  4A3F K;  3EQL A;  5M5W K;  3HOX K;  2JA6 K;  2A6E A;  3I4M K;  4A3D K;  1K83 C;  2E2J K;  4G7Z A;  2JA5 K;  4Q4Z A;  2Y0S L;  2WB1 L;  1Y1W K;  1IW7 A;  4X6A K;  4OIN A;  3GTQ C;  2JA8 K;  2O5I A;  4A3I K;  4A3E K;  5M3M K;  3GTG K;  3HOV K;  3S1M C;  4Y52 C;  3GTJ C;  4A3L K;  3S15 C;  2R93 K;  2JA7 K;  3PO3 C;  4G7O A;  1Y1V K;  4LK1 A;  5C4J C;  1WCM C;  3FKI C;  1I6V A;  3K7A C;  4QIW D;  4C2M C;  1R9T C;  1TWF C;  1SFO C;  3PO2 C;  4A3G C;  4BBR C;  4NOI A;  1ZYR A;  2O5J A;  3HOU C;  3S16 C;  3HKZ L;  5C4X K;  2NVQ K;  3S1R C;  4C3J K;  2PA8 L;  5IYB K;  3S2D C;  4YFX A;  3GTP K;  3H3V L;  3M3Y K;  1I50 K;  2WAQ L;  4A3C C;  2R7Z C;  2NVY C;  1TWA C;  4OIO A;  3S1Q K;  3HOZ C;  3I4N C;  2CW0 A;  4A3K C;  3S2H K;  4QJV B;  1K83 K;  4A93 C;  4C3I C;  4KMU A;  3HOW C;  5IYC K;  1YNJ A;  4OIP A;  5IP7 C;  3M4O C;  2VUM C;  2PMZ L;  4BBS C;  4A3J K;  3CQZ K;  5IP9 C;  3GTQ K;  3GTO K;  1TWG K;  3RZD C;  3S1M K;  5C3E C;  4C3H C;  2E2H C;  4Y52 K;  3S17 C;  3PO3 K;  4MQ9 A;  4XLN A;  5C4J K;  4AYB L;  1SMY A;  3FKI K;  3RZO K;  2E2I K;  3PO2 K;  5C44 C;  1TWF K;  2NVT C;  4A3B C;  1TWH K;  2R92 K;  5FLM K;  3H0G K;  1TWC C;  3HOU K;  2A69 A;  4BXX K;  3S1N C;  4XSZ A;  3GTL C;  5M5X K;  3S1R K;  4BY7 K;  4LK0 A;  3S14 C;  4G7H A;  4Y7N K;  2BE5 A;  2B63 C;  4BY1 C;  2R7Z K;  2NVY K;  1TWA K;  4JK1 A;  4A3K K;  5IYD K;  3GTM C;  4A93 K;  1I6H C;  2NVX K;  4KN7 A;  3I4M C;  2JA6 C;  4A3D C;  2VUM K;  4BBS K;  5IP9 K;  2JA5 C;  2A6H A;  1Y1W C;  4X6A C;  4QIW L;  1I3Q C;  4C3H K;  2E2H K;  2JA8 C;  4LJZ A;  3GTJ K;  3GTG C;  3S15 K;  2R93 C;  4A3L C;  3GTK C;  2NVT K;  4MEX A;  5FJ8 K;  2JA7 C;  1Y1V C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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