3GTQC

Backtracked rna polymerase ii complex induced by damage
Total Genus 45
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
45
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription, transferase/dna-rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
total genus 45
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtqC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtqC01
4QJVA 3HKZL 5FLMC 3GTJK 4A3GK 1YNJA 2NVQC 4A3IC 4Y7NK 1TWGC 3GTMC 5IP7C 3GTLC 3GTGK 3K7AK 4A93K 4OIOA 1SMYA 4C3JK 1K83K 3H0GC 3S15K 1I6HK 3FKIK 5IYCC 4A3LC 3HOXC 2PA8D 4A3FC 3PO3C 2E2JK 2YU9K 2NVTK 5M5WK 4A3MC 2JA5C 5IP9K 4BY7C 1SFOC 2E2HC 2JA7C 3GTJC 4A3GC 4Y52K 1IW7A 2B63K 4Y7NC 3H3VL 4C3HK 4YFXA 3GTGC 3HKZD 5M5YK 3K7AC 4A93C 4G7OA 1TWHK 2E2IK 4C3JC 1K83C 3PO3K 2R92K 3S16K 3S2HK 3M4OK 3S15C 1I6HC 3S17K 1R9TK 2JA7K 4A3DK 4BBSK 3GTKK 2YU9C 2E2JC 2NVTC 3S1RK 4A3JK 5IP9C 5TMFA 1WCMK 2BE5A 3DXJA 5M5XK 5IYBK 3GTOK 4Y52C 3S2DK 2B63C 4C3HC 3RZOK 3HOYK 2E2IC 5C44K 5M3MK 1TWHC 3EQLA 2PMZL 4A3BK 2A69A 2R92C 3S16C 3S2HC 4YFKA 3M4OC 3H3VD 4QIWL 3S17C 4BY1K 2A6HA 1R9TC 4BBSC 4KN7A 4A3DC 3GTQK 4LJZA 3GTKC 4BBRK 4A3CK 3S1RC 4A3JC 4G7HA 1HQMA 5TMCA 4LK1A 1WCMC 4OIQA 1Y1WK 5IYBC 3GTOC 3S2DC 2WAQL 3RZOC 1ZYRA 1Y1VK 5C3EK 3HOYC 1TWAK 5FJ8K 5C44C 2VUMK 3S1QK 4KMUA 4A3BC 3I4MK 2WB1L 1TWFK 5IYDK 3CQZK 4YFNA 4BY1C 2E2HK 3GTQC 4C3IK 2NVXK 2R93K 2PMZD 4BBRC 2Y0SL 4QIWD 3RZDK 5D4DA 3S1MC 3S14K 2A68A 4A3EK 2O5JA 3PO2K 1Y1WC 4XLNA 4A3KK 4MEYA 4YG2A 4GZYA 3HOUK 4Q4ZA 2NVYK 1Y1VC 5C3EC 2JA8K 1TWAC 4MQ9A 4AYBL 3GTPK 3I4NK 2VUMC 2R7ZK 3S1QC 3M3YK 4LLGA 3I4MC 5IYDC 1TWFC 4OIRA 3S1MK 2WAQD 4LK0A 4JK1A 4KN4A 4XSXA 3CQZC 2NVXC 4C3IC 2R93C 1I3QK 1TWCK 3RZDC 2WB1D 2PPBA 1I50K 4X6AK 3S14C 2JA6K 4A3EC 3HOVK 3PO2C 3S1NK 4OINA 2Y0SD 3HOWK 3HOZK 4A3KC 1YNNA 4BXXK 4OIPA 4XSZA 5C4XK 3HOUC 5C4JC 4XLPA 2NVYC 4G7ZA 2JA8C 2R7ZC 3GTPC 4QJVB 4C2MK 3M3YC 3I4NC 4A3CC 5FLMK 1XPPA 3WODA 4Q5SA 4A3IK 2NVQK 1TWGK 3GTMK 4AYBD 5IP7K 3GTLK 1I3QC 1TWCC 1I50C 4X6AC 2PA8L 3H0GK 4NOIA 2JA6C 3HOVC 5C4JK 2O5IA 5IYCK 1I6VA 2CW0A 3HOXK 3S1NC 4A3LK 1BDFA 3HOWC 3HOZC 4BXXC 4A3FK 2A6EA 5C4XC 4A3MK 4ZH4A 4MEXA 5M3FK 2JA5K 4BY7K 3FKIC 1SFOK 4C2MC
chains in the Genus database with same CATH superfamily
2XCQA 2FQTA 4GTCA 4PAAA 2XCRB 4C3JK 3H0GC 3S15K 4XCHA 1XZPB 2GSOA 5IYCC 4A3LC 1XZQA 1IS1A 1WQGA 3GEEA 2JA5C 4BY7C 2JA6A 1XXCA 4Y52K 1IW7A 2B63K 3L4KA 4C3HK 3H3VL 5EGHA 3G4CA 4C3JC 2R92K 3S15C 2RGRA 3S17K 4A3DK 2GSUA 4BBSK 4KATA 5HL7S 4A3JK 5JFEA 3DXJA 1USMA 2JH3A 3GTOK 4Y52C 4G0VA 2B63C 4C3HC 2ZFZA 3EQLA 2PMZL 2R92C 4QIWL 3GTJA 5IORA 4BLAA 3S17C 1VLOA 3OPFA 4BY1K 4BBSC 4KN7A 4A3DC 4GTBA 3GTQK 4A3JC 4KAWX 4LK1A 1PJ6A 3GTOC 2WAQL 3N0BA 4KMUA 1ZVUA 4BY1C 3GTQC 1XXAA 2Y0SL 3S1MC 3S14K 2ZJQS 1VH2A 3PO2K 3A8IA 3GTKA 5JVOA 3LPXA 1HI9A 3M3YK 3GEHA 1DCHA 4JK1A 4KN4A 4XSXA 4X6AK 4P5BA 4WILA 1IBAA 3S14C 1EK8A 2JA6K 3PO2C 5HL8A 3S1NK 3HOZK 4WJ4A 5EGEA 3GEIA 3S0XA 4C2MK 2B63A 3M3YC 5FLMK 1ZQ1C 3CF5S 2D6FC 1J98A 1DD5A 3GTLK 4KM9A 4WFBS 4X6AC 1TWAA 4KB2A 4BKWA 2JA6C 5C4JK 1TWFA 1XZQB 3LAJA 3S1NC 3HOXK 1BDFA 3BP3A 3HOZC 4A3FK 1O28A 4ILDA 4KMHA 1WOPA 3FKIC 4C2MC 5FLMC 3GIRA 3GTJK 3IPJA 3GTLC 4OIOA 2NVYA 1J6VA 1K83K 1ZBSA 1IL2A 1AB4A 4LQYA 4GTDA 1I6HK 3HOXC 2EBBA 2PA8D 4A3FC 3PO3C 2YU9K 5IP9K 1I3QA 1VGXA 4LOWA 4GT9A 3GTJC 2PHCB 4PABA 3HKZD 1YX2A 4G7OA 1K83C 3S16K 3S2HK 5JVGS 1I6HC 1B4AA 1TWGA 5IOSA 3GTKK 2YU9C 5IP9C 4BLBA 5IYBK 4WCES 3OEPA 4G0UA 3BP8C 4WFNS 3HOYK 3AQPA 1SFOA 2A69A 3S16C 3S2HC 4YFKA 1JQWA 3GTKC 3GTGA 1J6XA 2CFAB 4OIQA 1Y1WK 3FKIA 4KM8A 5IYBC 2KXYA 4KB4A 4WFAS 1ZYRA 3OREA 3HOYC 1TWAK 5FJ8K 3GTLA 1TWFK 3FOEA 4RMFA 1WOOA 4C3IK 3FHZA 1DCOA 1TWHA 2A68A 4A3EK 2O5JA 1Y1WC 3MMLB 4A3KK 4O2DA 1R9TA 4KC6A 4YG2A 1PJ5A 3N0CA 3A8KA 2NVYK 2JA8K 3GTPK 1TWAC 4MQ9A 1WCMA 4LLGA 3FOFA 1TWFC 3S1MK 2P5MA 1K83A 1RU0A 4LR2A 3QX3A 4C3IC 1I3QK 1TWCK 2WB1D 1BJTA 4A3EC 2YU9A 1EFWA 4A3KC 3SZYA 5C4XK 4XSZA 1O25A 1VRQC 4G0WA 2NVYC 3LAPA 2JA8C 3GTPC 2P8TA 2NVQK 4Q5SA 4A3IK 1TWGK 4AYBD 5IP7K 2CFAA 3V4GA 1I3QC 1TWCC 2PA8L 4M1XA 4J3NA 1O2FB 3NUHA 2NVXA 5C4XC 2R93A 4A3MK 4ZH4A 1B4BA 5JVHS 1SFOK 1IQ0A 3HKZL 4U67S 4KMAA 4A3GK 5IOTA 2NVQC 1O2BA 4A3IC 4AH6A 4Y7NK 1TWGC 5IP7C 3GTGK 1O29A 4A93K 1SMYA 2R7ZA 2GAGC 3AD9C 3FKIK 2ZUFA 1WQFA 1Y1WA 3SZZA 4A3MC 5M5WK 1I50A 2Y3PA 1SFOC 2JA7C 3LYWA 4A3GC 3A8JA 4Y7NC 3GTGC 1F9NA 4A93C 1TWHK 3PO3K 4GTAA 1WSVA 3M4OK 4GTEA 1R9TK 1O2AA 3GTMA 2KPUA 3DLLS 3ADAC 4C45A 3S1RK 4FM9A 4FZBA 5TMFA 4GTFA 1WCMK 2KWAA 5M5XK 4KARA 4DDQA 3GTPA 1IE0A 4KASA 3RZOK 3JSTA 2V6SA 5M3MK 1TWHC 2E2HA 4A3BK 3M4OC 1TWCA 4P9SA 1R9TC 1JVIA 3S1RC 5TMCA 3T02A 1WCMC 1USOA 3RZOC 5C3EK 4A3BC 3I4MK 2WB1L 5IYDK 4WJ3M 4YFNA 3AD7C 2NVXK 2R93K 3RZDK 2E2IA 1C0AA 5CHPA 1FEUA 4IOAS 2JA7A 4GZYA 3HOUK 5HQHA 5C3EC 2R7ZK 4AYBL 1BGWA 3VA7A 4A3CK 5DM7S 3I4MC 5IYDC 4OIRA 2GAHC 1INNA 4LK0A 1BS2A 2NVXC 2R93C 2L3UA 3RZDC 1I50K 2PPBA 1XXBA 3HOVK 5E68A 1EI6A 4OINA 3HOWK 4BXXK 1YNNA 3GDZA 3HOUC 4XLPA 3T00A 3PIOS 2R7ZC 4A3CC 3ERED 3GTMK 1Y1VA 1I50C 3GSIA 2VUMA 4NOIA 3HOVC 2O5IA 1L0WA 1I6VA 2W7VA 3HOWC 4BXXC 3CQZA 5CJ9A 2E2HK 4QJVA 1YNJA 4KDDA 3AD8C 3CAGA 1WSRA 3GTMC 1X31C 3K7AK 3TTGA 1J6WA 1WORA 3TFIA 2E2JK 2NVTK 1ISEA 2E2HC 1PJ7A 2GSNA 1V5VA 2V6TA 4YFXA 2V6UA 5M5YK 3K7AC 2E2IK 3AQOA 3AH5A 3N3YA 1ZXOA 1XZPA 2RH6A 2JA7K 1F93A 1YCLA 2E2JC 2NVTC 3H0GA 2BE5A 4IO9S 1KQ4A 3L4JA 3S2DK 2KQ1A 5TJ3A 3BUEA 1F7UA 2JA5A 2E2IC 4GFQA 5C44K 1GE9A 1WQHA 3PIPS 3H3VD 2A6HA 1O27A 4LJZA 4BBRK 5IOQA 4G7HA 1HQMA 3TFHA 4P5AA 3S2DC 4GTLA 1Y1VK 4WF9S 5C44C 1UV7A 2VUMK 3S1QK 2ZJPS 3CQZK 3T01A 2PMZD 4BBRC 1WIHA 4QIWD 1EH1A 5D4DA 2R92A 1JOEA 4XLNA 4MEYA 4Q4ZA 1EQRA 1Y1VC 1DCPA 3I4NK 2VUMC 3S1QC 2WAQD 3GTOA 3CQZC 2Y0SD 2L5NA 5DM6S 4OIPA 3GTQA 2ZJRS 3Q3QA 5C4JC 1O26A 4G7ZA 1VJEA 4QJVB 5L46A 3I4NC 4IOCS 3G4AA 1XPPA 4KMDA 3WODA 3TFJA 1G51A 1WOSA 3H0GK 1F7VA 3HXAA 2ZUEA 2XCOA 2CW0A 5IYCK 4A3LK 2A6EA 1O24A 2FQOA 2JA5K 4MEXA 5M3FK 4BY7K
chains in the Genus database with same CATH topology
4QJVA 3HKZL 5FLMC 3GTJK 4A3GK 1YNJA 2NVQC 4A3IC 4Y7NK 1TWGC 3GTMC 5IP7C 3GTLC 3GTGK 3K7AK 4A93K 4OIOA 1SMYA 4C3JK 1K83K 3H0GC 3S15K 1I6HK 3FKIK 5IYCC 4A3LC 3HOXC 2PA8D 4A3FC 3PO3C 2E2JK 2YU9K 2NVTK 5M5WK 4A3MC 2JA5C 5IP9K 4BY7C 1SFOC 2E2HC 2JA7C 3GTJC 4A3GC 4Y52K 1IW7A 2B63K 4Y7NC 3H3VL 4C3HK 4YFXA 3GTGC 3HKZD 5M5YK 3K7AC 4A93C 4G7OA 1TWHK 2E2IK 4C3JC 1K83C 3PO3K 2R92K 3S16K 3S2HK 3M4OK 3S15C 1I6HC 3S17K 1R9TK 2JA7K 4A3DK 4BBSK 3GTKK 2YU9C 2E2JC 2NVTC 3S1RK 4A3JK 5IP9C 5TMFA 1WCMK 2BE5A 3DXJA 5M5XK 5IYBK 3GTOK 4Y52C 3S2DK 2B63C 4C3HC 3RZOK 3HOYK 2E2IC 5C44K 5M3MK 1TWHC 3EQLA 2PMZL 4A3BK 2A69A 2R92C 3S16C 3S2HC 4YFKA 3M4OC 3H3VD 4QIWL 3S17C 4BY1K 2A6HA 1R9TC 4BBSC 4KN7A 4A3DC 3GTQK 4LJZA 3GTKC 4BBRK 4A3CK 3S1RC 4A3JC 4G7HA 1HQMA 5TMCA 4LK1A 1WCMC 4OIQA 1Y1WK 5IYBC 3GTOC 3S2DC 2WAQL 3RZOC 1ZYRA 1Y1VK 5C3EK 3HOYC 1TWAK 5FJ8K 5C44C 2VUMK 3S1QK 4KMUA 4A3BC 3I4MK 2WB1L 1TWFK 5IYDK 3CQZK 4YFNA 4BY1C 2E2HK 3GTQC 4C3IK 2NVXK 2R93K 2PMZD 4BBRC 2Y0SL 4QIWD 3RZDK 5D4DA 3S1MC 3S14K 2A68A 4A3EK 2O5JA 3PO2K 1Y1WC 4XLNA 4A3KK 4MEYA 4YG2A 4GZYA 3HOUK 4Q4ZA 2NVYK 1Y1VC 5C3EC 2JA8K 1TWAC 4MQ9A 4AYBL 3GTPK 3I4NK 2VUMC 2R7ZK 3S1QC 3M3YK 4LLGA 3I4MC 5IYDC 1TWFC 4OIRA 3S1MK 2WAQD 4LK0A 4JK1A 4KN4A 4XSXA 3CQZC 2NVXC 4C3IC 2R93C 1I3QK 1TWCK 3RZDC 2WB1D 2PPBA 1I50K 4X6AK 3S14C 2JA6K 4A3EC 3HOVK 3PO2C 3S1NK 4OINA 2Y0SD 3HOWK 3HOZK 4A3KC 1YNNA 4BXXK 4OIPA 4XSZA 5C4XK 3HOUC 5C4JC 4XLPA 2NVYC 4G7ZA 2JA8C 2R7ZC 3GTPC 4QJVB 4C2MK 3M3YC 3I4NC 4A3CC 5FLMK 1XPPA 3WODA 4Q5SA 4A3IK 2NVQK 1TWGK 3GTMK 4AYBD 5IP7K 3GTLK 1I3QC 1TWCC 1I50C 4X6AC 2PA8L 3H0GK 4NOIA 2JA6C 3HOVC 5C4JK 2O5IA 5IYCK 1I6VA 2CW0A 3HOXK 3S1NC 4A3LK 1BDFA 3HOWC 3HOZC 4BXXC 4A3FK 2A6EA 5C4XC 4A3MK 4ZH4A 4MEXA 5M3FK 2JA5K 4BY7K 3FKIC 1SFOK 4C2MC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4QJV A;  3HKZ L;  5FLM C;  3GTJ K;  4A3G K;  1YNJ A;  2NVQ C;  4A3I C;  4Y7N K;  1TWG C;  3GTM C;  5IP7 C;  3GTL C;  3GTG K;  3K7A K;  4A93 K;  4OIO A;  1SMY A;  4C3J K;  1K83 K;  3H0G C;  3S15 K;  1I6H K;  3FKI K;  5IYC C;  4A3L C;  3HOX C;  2PA8 D;  4A3F C;  3PO3 C;  2E2J K;  2YU9 K;  2NVT K;  5M5W K;  4A3M C;  2JA5 C;  5IP9 K;  4BY7 C;  1SFO C;  2E2H C;  2JA7 C;  3GTJ C;  4A3G C;  4Y52 K;  1IW7 A;  2B63 K;  4Y7N C;  3H3V L;  4C3H K;  4YFX A;  3GTG C;  3HKZ D;  5M5Y K;  3K7A C;  4A93 C;  4G7O A;  1TWH K;  2E2I K;  4C3J C;  1K83 C;  3PO3 K;  2R92 K;  3S16 K;  3S2H K;  3M4O K;  3S15 C;  1I6H C;  3S17 K;  1R9T K;  2JA7 K;  4A3D K;  4BBS K;  3GTK K;  2YU9 C;  2E2J C;  2NVT C;  3S1R K;  4A3J K;  5IP9 C;  5TMF A;  1WCM K;  2BE5 A;  3DXJ A;  5M5X K;  5IYB K;  3GTO K;  4Y52 C;  3S2D K;  2B63 C;  4C3H C;  3RZO K;  3HOY K;  2E2I C;  5C44 K;  5M3M K;  1TWH C;  3EQL A;  2PMZ L;  4A3B K;  2A69 A;  2R92 C;  3S16 C;  3S2H C;  4YFK A;  3M4O C;  3H3V D;  4QIW L;  3S17 C;  4BY1 K;  2A6H A;  1R9T C;  4BBS C;  4KN7 A;  4A3D C;  3GTQ K;  4LJZ A;  3GTK C;  4BBR K;  4A3C K;  3S1R C;  4A3J C;  4G7H A;  1HQM A;  5TMC A;  4LK1 A;  1WCM C;  4OIQ A;  1Y1W K;  5IYB C;  3GTO C;  3S2D C;  2WAQ L;  3RZO C;  1ZYR A;  1Y1V K;  5C3E K;  3HOY C;  1TWA K;  5FJ8 K;  5C44 C;  2VUM K;  3S1Q K;  4KMU A;  4A3B C;  3I4M K;  2WB1 L;  1TWF K;  5IYD K;  3CQZ K;  4YFN A;  4BY1 C;  2E2H K;  3GTQ C;  4C3I K;  2NVX K;  2R93 K;  2PMZ D;  4BBR C;  2Y0S L;  4QIW D;  3RZD K;  5D4D A;  3S1M C;  3S14 K;  2A68 A;  4A3E K;  2O5J A;  3PO2 K;  1Y1W C;  4XLN A;  4A3K K;  4MEY A;  4YG2 A;  4GZY A;  3HOU K;  4Q4Z A;  2NVY K;  1Y1V C;  5C3E C;  2JA8 K;  1TWA C;  4MQ9 A;  4AYB L;  3GTP K;  3I4N K;  2VUM C;  2R7Z K;  3S1Q C;  3M3Y K;  4LLG A;  3I4M C;  5IYD C;  1TWF C;  4OIR A;  3S1M K;  2WAQ D;  4LK0 A;  4JK1 A;  4KN4 A;  4XSX A;  3CQZ C;  2NVX C;  4C3I C;  2R93 C;  1I3Q K;  1TWC K;  3RZD C;  2WB1 D;  2PPB A;  1I50 K;  4X6A K;  3S14 C;  2JA6 K;  4A3E C;  3HOV K;  3PO2 C;  3S1N K;  4OIN A;  2Y0S D;  3HOW K;  3HOZ K;  4A3K C;  1YNN A;  4BXX K;  4OIP A;  4XSZ A;  5C4X K;  3HOU C;  5C4J C;  4XLP A;  2NVY C;  4G7Z A;  2JA8 C;  2R7Z C;  3GTP C;  4QJV B;  4C2M K;  3M3Y C;  3I4N C;  4A3C C;  5FLM K;  1XPP A;  3WOD A;  4Q5S A;  4A3I K;  2NVQ K;  1TWG K;  3GTM K;  4AYB D;  5IP7 K;  3GTL K;  1I3Q C;  1TWC C;  1I50 C;  4X6A C;  2PA8 L;  3H0G K;  4NOI A;  2JA6 C;  3HOV C;  5C4J K;  2O5I A;  5IYC K;  1I6V A;  2CW0 A;  3HOX K;  3S1N C;  4A3L K;  1BDF A;  3HOW C;  3HOZ C;  4BXX C;  4A3F K;  2A6E A;  5C4X C;  4A3M K;  4ZH4 A;  4MEX A;  5M3F K;  2JA5 K;  4BY7 K;  3FKI C;  1SFO K;  4C2M C; 
#chains in the Genus database with same CATH topology
 2XCQ A;  2FQT A;  4GTC A;  4PAA A;  2XCR B;  4C3J K;  3H0G C;  3S15 K;  4XCH A;  1XZP B;  2GSO A;  5IYC C;  4A3L C;  1XZQ A;  1IS1 A;  1WQG A;  3GEE A;  2JA5 C;  4BY7 C;  2JA6 A;  1XXC A;  4Y52 K;  1IW7 A;  2B63 K;  3L4K A;  4C3H K;  3H3V L;  5EGH A;  3G4C A;  4C3J C;  2R92 K;  3S15 C;  2RGR A;  3S17 K;  4A3D K;  2GSU A;  4BBS K;  4KAT A;  5HL7 S;  4A3J K;  5JFE A;  3DXJ A;  1USM A;  2JH3 A;  3GTO K;  4Y52 C;  4G0V A;  2B63 C;  4C3H C;  2ZFZ A;  3EQL A;  2PMZ L;  2R92 C;  4QIW L;  3GTJ A;  5IOR A;  4BLA A;  3S17 C;  1VLO A;  3OPF A;  4BY1 K;  4BBS C;  4KN7 A;  4A3D C;  4GTB A;  3GTQ K;  4A3J C;  4KAW X;  4LK1 A;  1PJ6 A;  3GTO C;  2WAQ L;  3N0B A;  4KMU A;  1ZVU A;  4BY1 C;  3GTQ C;  1XXA A;  2Y0S L;  3S1M C;  3S14 K;  2ZJQ S;  1VH2 A;  3PO2 K;  3A8I A;  3GTK A;  5JVO A;  3LPX A;  1HI9 A;  3M3Y K;  3GEH A;  1DCH A;  4JK1 A;  4KN4 A;  4XSX A;  4X6A K;  4P5B A;  4WIL A;  1IBA A;  3S14 C;  1EK8 A;  2JA6 K;  3PO2 C;  5HL8 A;  3S1N K;  3HOZ K;  4WJ4 A;  5EGE A;  3GEI A;  3S0X A;  4C2M K;  2B63 A;  3M3Y C;  5FLM K;  1ZQ1 C;  3CF5 S;  2D6F C;  1J98 A;  1DD5 A;  3GTL K;  4KM9 A;  4WFB S;  4X6A C;  1TWA A;  4KB2 A;  4BKW A;  2JA6 C;  5C4J K;  1TWF A;  1XZQ B;  3LAJ A;  3S1N C;  3HOX K;  1BDF A;  3BP3 A;  3HOZ C;  4A3F K;  1O28 A;  4ILD A;  4KMH A;  1WOP A;  3FKI C;  4C2M C;  5FLM C;  3GIR A;  3GTJ K;  3IPJ A;  3GTL C;  4OIO A;  2NVY A;  1J6V A;  1K83 K;  1ZBS A;  1IL2 A;  1AB4 A;  4LQY A;  4GTD A;  1I6H K;  3HOX C;  2EBB A;  2PA8 D;  4A3F C;  3PO3 C;  2YU9 K;  5IP9 K;  1I3Q A;  1VGX A;  4LOW A;  4GT9 A;  3GTJ C;  2PHC B;  4PAB A;  3HKZ D;  1YX2 A;  4G7O A;  1K83 C;  3S16 K;  3S2H K;  5JVG S;  1I6H C;  1B4A A;  1TWG A;  5IOS A;  3GTK K;  2YU9 C;  5IP9 C;  4BLB A;  5IYB K;  4WCE S;  3OEP A;  4G0U A;  3BP8 C;  4WFN S;  3HOY K;  3AQP A;  1SFO A;  2A69 A;  3S16 C;  3S2H C;  4YFK A;  1JQW A;  3GTK C;  3GTG A;  1J6X A;  2CFA B;  4OIQ A;  1Y1W K;  3FKI A;  4KM8 A;  5IYB C;  2KXY A;  4KB4 A;  4WFA S;  1ZYR A;  3ORE A;  3HOY C;  1TWA K;  5FJ8 K;  3GTL A;  1TWF K;  3FOE A;  4RMF A;  1WOO A;  4C3I K;  3FHZ A;  1DCO A;  1TWH A;  2A68 A;  4A3E K;  2O5J A;  1Y1W C;  3MML B;  4A3K K;  4O2D A;  1R9T A;  4KC6 A;  4YG2 A;  1PJ5 A;  3N0C A;  3A8K A;  2NVY K;  2JA8 K;  3GTP K;  1TWA C;  4MQ9 A;  1WCM A;  4LLG A;  3FOF A;  1TWF C;  3S1M K;  2P5M A;  1K83 A;  1RU0 A;  4LR2 A;  3QX3 A;  4C3I C;  1I3Q K;  1TWC K;  2WB1 D;  1BJT A;  4A3E C;  2YU9 A;  1EFW A;  4A3K C;  3SZY A;  5C4X K;  4XSZ A;  1O25 A;  1VRQ C;  4G0W A;  2NVY C;  3LAP A;  2JA8 C;  3GTP C;  2P8T A;  2NVQ K;  4Q5S A;  4A3I K;  1TWG K;  4AYB D;  5IP7 K;  2CFA A;  3V4G A;  1I3Q C;  1TWC C;  2PA8 L;  4M1X A;  4J3N A;  1O2F B;  3NUH A;  2NVX A;  5C4X C;  2R93 A;  4A3M K;  4ZH4 A;  1B4B A;  5JVH S;  1SFO K;  1IQ0 A;  3HKZ L;  4U67 S;  4KMA A;  4A3G K;  5IOT A;  2NVQ C;  1O2B A;  4A3I C;  4AH6 A;  4Y7N K;  1TWG C;  5IP7 C;  3GTG K;  1O29 A;  4A93 K;  1SMY A;  2R7Z A;  2GAG C;  3AD9 C;  3FKI K;  2ZUF A;  1WQF A;  1Y1W A;  3SZZ A;  4A3M C;  5M5W K;  1I50 A;  2Y3P A;  1SFO C;  2JA7 C;  3LYW A;  4A3G C;  3A8J A;  4Y7N C;  3GTG C;  1F9N A;  4A93 C;  1TWH K;  3PO3 K;  4GTA A;  1WSV A;  3M4O K;  4GTE A;  1R9T K;  1O2A A;  3GTM A;  2KPU A;  3DLL S;  3ADA C;  4C45 A;  3S1R K;  4FM9 A;  4FZB A;  5TMF A;  4GTF A;  1WCM K;  2KWA A;  5M5X K;  4KAR A;  4DDQ A;  3GTP A;  1IE0 A;  4KAS A;  3RZO K;  3JST A;  2V6S A;  5M3M K;  1TWH C;  2E2H A;  4A3B K;  3M4O C;  1TWC A;  4P9S A;  1R9T C;  1JVI A;  3S1R C;  5TMC A;  3T02 A;  1WCM C;  1USO A;  3RZO C;  5C3E K;  4A3B C;  3I4M K;  2WB1 L;  5IYD K;  4WJ3 M;  4YFN A;  3AD7 C;  2NVX K;  2R93 K;  3RZD K;  2E2I A;  1C0A A;  5CHP A;  1FEU A;  4IOA S;  2JA7 A;  4GZY A;  3HOU K;  5HQH A;  5C3E C;  2R7Z K;  4AYB L;  1BGW A;  3VA7 A;  4A3C K;  5DM7 S;  3I4M C;  5IYD C;  4OIR A;  2GAH C;  1INN A;  4LK0 A;  1BS2 A;  2NVX C;  2R93 C;  2L3U A;  3RZD C;  1I50 K;  2PPB A;  1XXB A;  3HOV K;  5E68 A;  1EI6 A;  4OIN A;  3HOW K;  4BXX K;  1YNN A;  3GDZ A;  3HOU C;  4XLP A;  3T00 A;  3PIO S;  2R7Z C;  4A3C C;  3ERE D;  3GTM K;  1Y1V A;  1I50 C;  3GSI A;  2VUM A;  4NOI A;  3HOV C;  2O5I A;  1L0W A;  1I6V A;  2W7V A;  3HOW C;  4BXX C;  3CQZ A;  5CJ9 A;  2E2H K;  4QJV A;  1YNJ A;  4KDD A;  3AD8 C;  3CAG A;  1WSR A;  3GTM C;  1X31 C;  3K7A K;  3TTG A;  1J6W A;  1WOR A;  3TFI A;  2E2J K;  2NVT K;  1ISE A;  2E2H C;  1PJ7 A;  2GSN A;  1V5V A;  2V6T A;  4YFX A;  2V6U A;  5M5Y K;  3K7A C;  2E2I K;  3AQO A;  3AH5 A;  3N3Y A;  1ZXO A;  1XZP A;  2RH6 A;  2JA7 K;  1F93 A;  1YCL A;  2E2J C;  2NVT C;  3H0G A;  2BE5 A;  4IO9 S;  1KQ4 A;  3L4J A;  3S2D K;  2KQ1 A;  5TJ3 A;  3BUE A;  1F7U A;  2JA5 A;  2E2I C;  4GFQ A;  5C44 K;  1GE9 A;  1WQH A;  3PIP S;  3H3V D;  2A6H A;  1O27 A;  4LJZ A;  4BBR K;  5IOQ A;  4G7H A;  1HQM A;  3TFH A;  4P5A A;  3S2D C;  4GTL A;  1Y1V K;  4WF9 S;  5C44 C;  1UV7 A;  2VUM K;  3S1Q K;  2ZJP S;  3CQZ K;  3T01 A;  2PMZ D;  4BBR C;  1WIH A;  4QIW D;  1EH1 A;  5D4D A;  2R92 A;  1JOE A;  4XLN A;  4MEY A;  4Q4Z A;  1EQR A;  1Y1V C;  1DCP A;  3I4N K;  2VUM C;  3S1Q C;  2WAQ D;  3GTO A;  3CQZ C;  2Y0S D;  2L5N A;  5DM6 S;  4OIP A;  3GTQ A;  2ZJR S;  3Q3Q A;  5C4J C;  1O26 A;  4G7Z A;  1VJE A;  4QJV B;  5L46 A;  3I4N C;  4IOC S;  3G4A A;  1XPP A;  4KMD A;  3WOD A;  3TFJ A;  1G51 A;  1WOS A;  3H0G K;  1F7V A;  3HXA A;  2ZUE A;  2XCO A;  2CW0 A;  5IYC K;  4A3L K;  2A6E A;  1O24 A;  2FQO A;  2JA5 K;  4MEX A;  5M3F K;  4BY7 K; 
#chains in the Genus database with same CATH homology
 4QJV A;  3HKZ L;  5FLM C;  3GTJ K;  4A3G K;  1YNJ A;  2NVQ C;  4A3I C;  4Y7N K;  1TWG C;  3GTM C;  5IP7 C;  3GTL C;  3GTG K;  3K7A K;  4A93 K;  4OIO A;  1SMY A;  4C3J K;  1K83 K;  3H0G C;  3S15 K;  1I6H K;  3FKI K;  5IYC C;  4A3L C;  3HOX C;  2PA8 D;  4A3F C;  3PO3 C;  2E2J K;  2YU9 K;  2NVT K;  5M5W K;  4A3M C;  2JA5 C;  5IP9 K;  4BY7 C;  1SFO C;  2E2H C;  2JA7 C;  3GTJ C;  4A3G C;  4Y52 K;  1IW7 A;  2B63 K;  4Y7N C;  3H3V L;  4C3H K;  4YFX A;  3GTG C;  3HKZ D;  5M5Y K;  3K7A C;  4A93 C;  4G7O A;  1TWH K;  2E2I K;  4C3J C;  1K83 C;  3PO3 K;  2R92 K;  3S16 K;  3S2H K;  3M4O K;  3S15 C;  1I6H C;  3S17 K;  1R9T K;  2JA7 K;  4A3D K;  4BBS K;  3GTK K;  2YU9 C;  2E2J C;  2NVT C;  3S1R K;  4A3J K;  5IP9 C;  5TMF A;  1WCM K;  2BE5 A;  3DXJ A;  5M5X K;  5IYB K;  3GTO K;  4Y52 C;  3S2D K;  2B63 C;  4C3H C;  3RZO K;  3HOY K;  2E2I C;  5C44 K;  5M3M K;  1TWH C;  3EQL A;  2PMZ L;  4A3B K;  2A69 A;  2R92 C;  3S16 C;  3S2H C;  4YFK A;  3M4O C;  3H3V D;  4QIW L;  3S17 C;  4BY1 K;  2A6H A;  1R9T C;  4BBS C;  4KN7 A;  4A3D C;  3GTQ K;  4LJZ A;  3GTK C;  4BBR K;  4A3C K;  3S1R C;  4A3J C;  4G7H A;  1HQM A;  5TMC A;  4LK1 A;  1WCM C;  4OIQ A;  1Y1W K;  5IYB C;  3GTO C;  3S2D C;  2WAQ L;  3RZO C;  1ZYR A;  1Y1V K;  5C3E K;  3HOY C;  1TWA K;  5FJ8 K;  5C44 C;  2VUM K;  3S1Q K;  4KMU A;  4A3B C;  3I4M K;  2WB1 L;  1TWF K;  5IYD K;  3CQZ K;  4YFN A;  4BY1 C;  2E2H K;  3GTQ C;  4C3I K;  2NVX K;  2R93 K;  2PMZ D;  4BBR C;  2Y0S L;  4QIW D;  3RZD K;  5D4D A;  3S1M C;  3S14 K;  2A68 A;  4A3E K;  2O5J A;  3PO2 K;  1Y1W C;  4XLN A;  4A3K K;  4MEY A;  4YG2 A;  4GZY A;  3HOU K;  4Q4Z A;  2NVY K;  1Y1V C;  5C3E C;  2JA8 K;  1TWA C;  4MQ9 A;  4AYB L;  3GTP K;  3I4N K;  2VUM C;  2R7Z K;  3S1Q C;  3M3Y K;  4LLG A;  3I4M C;  5IYD C;  1TWF C;  4OIR A;  3S1M K;  2WAQ D;  4LK0 A;  4JK1 A;  4KN4 A;  4XSX A;  3CQZ C;  2NVX C;  4C3I C;  2R93 C;  1I3Q K;  1TWC K;  3RZD C;  2WB1 D;  2PPB A;  1I50 K;  4X6A K;  3S14 C;  2JA6 K;  4A3E C;  3HOV K;  3PO2 C;  3S1N K;  4OIN A;  2Y0S D;  3HOW K;  3HOZ K;  4A3K C;  1YNN A;  4BXX K;  4OIP A;  4XSZ A;  5C4X K;  3HOU C;  5C4J C;  4XLP A;  2NVY C;  4G7Z A;  2JA8 C;  2R7Z C;  3GTP C;  4QJV B;  4C2M K;  3M3Y C;  3I4N C;  4A3C C;  5FLM K;  1XPP A;  3WOD A;  4Q5S A;  4A3I K;  2NVQ K;  1TWG K;  3GTM K;  4AYB D;  5IP7 K;  3GTL K;  1I3Q C;  1TWC C;  1I50 C;  4X6A C;  2PA8 L;  3H0G K;  4NOI A;  2JA6 C;  3HOV C;  5C4J K;  2O5I A;  5IYC K;  1I6V A;  2CW0 A;  3HOX K;  3S1N C;  4A3L K;  1BDF A;  3HOW C;  3HOZ C;  4BXX C;  4A3F K;  2A6E A;  5C4X C;  4A3M K;  4ZH4 A;  4MEX A;  5M3F K;  2JA5 K;  4BY7 K;  3FKI C;  1SFO K;  4C2M C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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