3MR1A

Crystal structure of methionine aminopeptidase from rickettsia prowazekii
Total Genus 79
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
79
sequence length
249
structure length
249
Chain Sequence
SMIKIHTEKDFIKMRAAGKLAAETLDFITDHVKPNVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSICTSINHVVCHGIPNDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNYSVVRDYTGHGIGRVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMINAGNYDTILSKLDGWTVTTRDKSLSAQFEHTIGVTKDGFEIFTL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Methionine aminopeptidase
publication title Rickettsia prowazekii methionine aminopeptidase as a promising target for the development of antibacterial agents.
pubmed doi rcsb
source organism Rickettsia prowazekii
total genus 79
structure length 249
sequence length 249
chains with identical sequence B, C, D
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2010-04-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3mr1A00
4FLJA 2P99A 1YJ3A 1C24A 2GZ5A 1PV9A 5JHUA 3IG4A 1YW7A 2NQ7A 2EA2A 3L7GA 4RZYA 3MATA 4S01A 2B3HA 4U76A 4U6CA 4U75A 3TB5A 4EGEA 4IPAA 5CDEA 2BWWA 1WBQA 4Z7MA 1XNZA 2Q94A 2BH3A 3IU9A 4U73A 5D6FA 5FCFA 3IU8A 4IKTA 2G6PA 1BOAA 3FM3A 3PKCA 3BITA 2P98A 3FMRA 3RORA 2P9AA 2ADUA 2EVCA 1YW8A 2GG0A 3D27A 2GG9A 4U1BA 4U71A 1BN5A 2MATA 3FMQA 5JI6A 2DFIA 2Q95A 1W7VA 3CB6A 2GA2A 1QXZA 2EVOA 2HOWA 4IKSA 3TAVA 2EA4A 2V3YA 4MATA 2OKNA 4OOKA 4S2TP 2BWVA 2EVMA 1KP0A 4IDYA 4A6VA 3CTZA 1QXYA 4FKCA 4U70A 4RGZ1 5JFRA 4IKRA 1JAWA 4PNCA 2Q93A 3PKEA 1CHMA 1WL6A 2ZSGA 5CDVA 2BWYA 2GG5A 2GG7A 3PKAA 2Q96A 4FLIA 1WY2A 4R60A 2GG3A 1YW9A 3MX6A 2BHAA 1A16A 4U6EA 5CNXA 2V3ZA 1N51A 5CE6A 2GU4A 1MATA 4JUQA 4B28A 2NQ6A 4ZWPA 3S6BA 1O0XA 1R58A 4FLKA 4U6JA 1R5GA 2GGBA 5D6EA 2BB7A 1Y1NA 4IF7A 4U6WA 2GTXA 4IU6A 4IKUA 2Q92A 2BHDA 4ZNGA 5CDLA 1B6AA 1B59A 1C23A 1WL9A 3CB5A 1XGSA 1M35A 2BWXA 4FUKA 3MR1A 4S00A 4RZZA 1QZYA 1WN1A 2BWTA 1YVMA 1R5HA 1WLRA 1C22A 4ZWUA 2BWSA 1C21A 2OAZA 4HXXA 4FO8A 2Q8KA 2BN7A 1WKMA 2GG2A 3BIQA 2IW2A 3Q6DA 2BHCA 4U6ZA 3RVAA 3BIPA 4QR8A 2B3KA 2GU5A 5CLSA 4U69A 1W2MA 2GGCA 2GU6A 4IECA 1XGNA 4A6WA 1C27A 1QXWA 3IU7A 3PKDA 1KQ9A 4ZWOA 2GU7A 3L24A 4S2RP 4FO7A 5FCHA 1XGOA 4FLLA 1KQ0A 2BWUA 2V3XA 1XGMA 2GG8A 3PKBA 5CIKA 4KM3A 5E5BA 2B3LA 2BHBA 2V6CA 4PV4A
chains in the Genus database with same CATH superfamily
4FLJA 2P99A 1YJ3A 1C24A 2GZ5A 1PV9A 5JHUA 3IG4A 1YW7A 2NQ7A 2EA2A 3L7GA 4RZYA 3MATA 4S01A 2B3HA 4U76A 4U6CA 4U75A 3TB5A 4EGEA 4IPAA 5CDEA 2BWWA 1WBQA 4Z7MA 1XNZA 2Q94A 2BH3A 3IU9A 4U73A 5D6FA 5FCFA 3IU8A 4IKTA 2G6PA 1BOAA 3FM3A 3PKCA 3BITA 2P98A 3FMRA 3RORA 2P9AA 2ADUA 2EVCA 1YW8A 2GG0A 3D27A 2GG9A 4U1BA 4U71A 1BN5A 2MATA 3FMQA 5JI6A 2DFIA 2Q95A 1W7VA 3CB6A 2GA2A 1QXZA 2EVOA 2HOWA 4IKSA 3TAVA 2EA4A 2V3YA 4MATA 2OKNA 4OOKA 4S2TP 2BWVA 2EVMA 1KP0A 4IDYA 4A6VA 3CTZA 1QXYA 4FKCA 4U70A 4RGZ1 5JFRA 4IKRA 1JAWA 4PNCA 2Q93A 3PKEA 1CHMA 1WL6A 2ZSGA 5CDVA 2BWYA 2GG5A 2GG7A 3PKAA 2Q96A 4FLIA 1WY2A 4R60A 2GG3A 1YW9A 3MX6A 2BHAA 1A16A 4U6EA 5CNXA 2V3ZA 1N51A 5CE6A 2GU4A 1MATA 4JUQA 4B28A 2NQ6A 4ZWPA 3S6BA 1O0XA 1R58A 4FLKA 4U6JA 1R5GA 2GGBA 5D6EA 2BB7A 1Y1NA 4IF7A 4U6WA 2GTXA 4IU6A 4IKUA 2Q92A 2BHDA 4ZNGA 5CDLA 1B6AA 1B59A 1C23A 1WL9A 3CB5A 1XGSA 1M35A 2BWXA 4FUKA 3MR1A 4S00A 4RZZA 1QZYA 1WN1A 2BWTA 1YVMA 1R5HA 1WLRA 1C22A 4ZWUA 2BWSA 1C21A 2OAZA 4HXXA 4FO8A 2Q8KA 2BN7A 1WKMA 2GG2A 3BIQA 2IW2A 3Q6DA 2BHCA 4U6ZA 3RVAA 3BIPA 4QR8A 2B3KA 2GU5A 5CLSA 4U69A 1W2MA 2GGCA 2GU6A 4IECA 1XGNA 4A6WA 1C27A 1QXWA 3IU7A 3PKDA 1KQ9A 4ZWOA 2GU7A 3L24A 4S2RP 4FO7A 5FCHA 1XGOA 4FLLA 1KQ0A 2BWUA 2V3XA 1XGMA 2GG8A 3PKBA 5CIKA 4KM3A 5E5BA 2B3LA 2BHBA 2V6CA 4PV4A
chains in the Genus database with same CATH topology
4FLJA 2P99A 1YJ3A 1C24A 2GZ5A 1PV9A 5JHUA 3IG4A 1YW7A 2NQ7A 2EA2A 3L7GA 4RZYA 3MATA 4S01A 2B3HA 4U76A 4U6CA 4U75A 3TB5A 4EGEA 4IPAA 5CDEA 2BWWA 1WBQA 4Z7MA 1XNZA 2Q94A 2BH3A 3IU9A 4U73A 5D6FA 5FCFA 3IU8A 4IKTA 2G6PA 1BOAA 3FM3A 3PKCA 3BITA 2P98A 3FMRA 3RORA 2P9AA 2ADUA 2EVCA 1YW8A 2GG0A 3D27A 2GG9A 4U1BA 4U71A 1BN5A 2MATA 3FMQA 5JI6A 2DFIA 2Q95A 1W7VA 3CB6A 2GA2A 1QXZA 2EVOA 2HOWA 4IKSA 3TAVA 2EA4A 2V3YA 4MATA 2OKNA 4OOKA 4S2TP 2BWVA 2EVMA 1KP0A 4IDYA 4A6VA 3CTZA 1QXYA 4FKCA 4U70A 4RGZ1 5JFRA 4IKRA 1JAWA 4PNCA 2Q93A 3PKEA 1CHMA 1WL6A 2ZSGA 5CDVA 2BWYA 2GG5A 2GG7A 3PKAA 2Q96A 4FLIA 1WY2A 4R60A 2GG3A 1YW9A 3MX6A 2BHAA 1A16A 4U6EA 5CNXA 2V3ZA 1N51A 5CE6A 2GU4A 1MATA 4JUQA 4B28A 2NQ6A 4ZWPA 3S6BA 1O0XA 1R58A 4FLKA 4U6JA 1R5GA 2GGBA 5D6EA 2BB7A 1Y1NA 4IF7A 4U6WA 2GTXA 4IU6A 4IKUA 2Q92A 2BHDA 4ZNGA 5CDLA 1B6AA 1B59A 1C23A 1WL9A 3CB5A 1XGSA 1M35A 2BWXA 4FUKA 3MR1A 4S00A 4RZZA 1QZYA 1WN1A 2BWTA 1YVMA 1R5HA 1WLRA 1C22A 4ZWUA 2BWSA 1C21A 2OAZA 4HXXA 4FO8A 2Q8KA 2BN7A 1WKMA 2GG2A 3BIQA 2IW2A 3Q6DA 2BHCA 4U6ZA 3RVAA 3BIPA 4QR8A 2B3KA 2GU5A 5CLSA 4U69A 1W2MA 2GGCA 2GU6A 4IECA 1XGNA 4A6WA 1C27A 1QXWA 3IU7A 3PKDA 1KQ9A 4ZWOA 2GU7A 3L24A 4S2RP 4FO7A 5FCHA 1XGOA 4FLLA 1KQ0A 2BWUA 2V3XA 1XGMA 2GG8A 3PKBA 5CIKA 4KM3A 5E5BA 2B3LA 2BHBA 2V6CA 4PV4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FLJ A;  2P99 A;  1YJ3 A;  1C24 A;  2GZ5 A;  1PV9 A;  5JHU A;  3IG4 A;  1YW7 A;  2NQ7 A;  2EA2 A;  3L7G A;  4RZY A;  3MAT A;  4S01 A;  2B3H A;  4U76 A;  4U6C A;  4U75 A;  3TB5 A;  4EGE A;  4IPA A;  5CDE A;  2BWW A;  1WBQ A;  4Z7M A;  1XNZ A;  2Q94 A;  2BH3 A;  3IU9 A;  4U73 A;  5D6F A;  5FCF A;  3IU8 A;  4IKT A;  2G6P A;  1BOA A;  3FM3 A;  3PKC A;  3BIT A;  2P98 A;  3FMR A;  3ROR A;  2P9A A;  2ADU A;  2EVC A;  1YW8 A;  2GG0 A;  3D27 A;  2GG9 A;  4U1B A;  4U71 A;  1BN5 A;  2MAT A;  3FMQ A;  5JI6 A;  2DFI A;  2Q95 A;  1W7V A;  3CB6 A;  2GA2 A;  1QXZ A;  2EVO A;  2HOW A;  4IKS A;  3TAV A;  2EA4 A;  2V3Y A;  4MAT A;  2OKN A;  4OOK A;  4S2T P;  2BWV A;  2EVM A;  1KP0 A;  4IDY A;  4A6V A;  3CTZ A;  1QXY A;  4FKC A;  4U70 A;  4RGZ 1;  5JFR A;  4IKR A;  1JAW A;  4PNC A;  2Q93 A;  3PKE A;  1CHM A;  1WL6 A;  2ZSG A;  5CDV A;  2BWY A;  2GG5 A;  2GG7 A;  3PKA A;  2Q96 A;  4FLI A;  1WY2 A;  4R60 A;  2GG3 A;  1YW9 A;  3MX6 A;  2BHA A;  1A16 A;  4U6E A;  5CNX A;  2V3Z A;  1N51 A;  5CE6 A;  2GU4 A;  1MAT A;  4JUQ A;  4B28 A;  2NQ6 A;  4ZWP A;  3S6B A;  1O0X A;  1R58 A;  4FLK A;  4U6J A;  1R5G A;  2GGB A;  5D6E A;  2BB7 A;  1Y1N A;  4IF7 A;  4U6W A;  2GTX A;  4IU6 A;  4IKU A;  2Q92 A;  2BHD A;  4ZNG A;  5CDL A;  1B6A A;  1B59 A;  1C23 A;  1WL9 A;  3CB5 A;  1XGS A;  1M35 A;  2BWX A;  4FUK A;  3MR1 A;  4S00 A;  4RZZ A;  1QZY A;  1WN1 A;  2BWT A;  1YVM A;  1R5H A;  1WLR A;  1C22 A;  4ZWU A;  2BWS A;  1C21 A;  2OAZ A;  4HXX A;  4FO8 A;  2Q8K A;  2BN7 A;  1WKM A;  2GG2 A;  3BIQ A;  2IW2 A;  3Q6D A;  2BHC A;  4U6Z A;  3RVA A;  3BIP A;  4QR8 A;  2B3K A;  2GU5 A;  5CLS A;  4U69 A;  1W2M A;  2GGC A;  2GU6 A;  4IEC A;  1XGN A;  4A6W A;  1C27 A;  1QXW A;  3IU7 A;  3PKD A;  1KQ9 A;  4ZWO A;  2GU7 A;  3L24 A;  4S2R P;  4FO7 A;  5FCH A;  1XGO A;  4FLL A;  1KQ0 A;  2BWU A;  2V3X A;  1XGM A;  2GG8 A;  3PKB A;  5CIK A;  4KM3 A;  5E5B A;  2B3L A;  2BHB A;  2V6C A;  4PV4 A; 
#chains in the Genus database with same CATH topology
 4FLJ A;  2P99 A;  1YJ3 A;  1C24 A;  2GZ5 A;  1PV9 A;  5JHU A;  3IG4 A;  1YW7 A;  2NQ7 A;  2EA2 A;  3L7G A;  4RZY A;  3MAT A;  4S01 A;  2B3H A;  4U76 A;  4U6C A;  4U75 A;  3TB5 A;  4EGE A;  4IPA A;  5CDE A;  2BWW A;  1WBQ A;  4Z7M A;  1XNZ A;  2Q94 A;  2BH3 A;  3IU9 A;  4U73 A;  5D6F A;  5FCF A;  3IU8 A;  4IKT A;  2G6P A;  1BOA A;  3FM3 A;  3PKC A;  3BIT A;  2P98 A;  3FMR A;  3ROR A;  2P9A A;  2ADU A;  2EVC A;  1YW8 A;  2GG0 A;  3D27 A;  2GG9 A;  4U1B A;  4U71 A;  1BN5 A;  2MAT A;  3FMQ A;  5JI6 A;  2DFI A;  2Q95 A;  1W7V A;  3CB6 A;  2GA2 A;  1QXZ A;  2EVO A;  2HOW A;  4IKS A;  3TAV A;  2EA4 A;  2V3Y A;  4MAT A;  2OKN A;  4OOK A;  4S2T P;  2BWV A;  2EVM A;  1KP0 A;  4IDY A;  4A6V A;  3CTZ A;  1QXY A;  4FKC A;  4U70 A;  4RGZ 1;  5JFR A;  4IKR A;  1JAW A;  4PNC A;  2Q93 A;  3PKE A;  1CHM A;  1WL6 A;  2ZSG A;  5CDV A;  2BWY A;  2GG5 A;  2GG7 A;  3PKA A;  2Q96 A;  4FLI A;  1WY2 A;  4R60 A;  2GG3 A;  1YW9 A;  3MX6 A;  2BHA A;  1A16 A;  4U6E A;  5CNX A;  2V3Z A;  1N51 A;  5CE6 A;  2GU4 A;  1MAT A;  4JUQ A;  4B28 A;  2NQ6 A;  4ZWP A;  3S6B A;  1O0X A;  1R58 A;  4FLK A;  4U6J A;  1R5G A;  2GGB A;  5D6E A;  2BB7 A;  1Y1N A;  4IF7 A;  4U6W A;  2GTX A;  4IU6 A;  4IKU A;  2Q92 A;  2BHD A;  4ZNG A;  5CDL A;  1B6A A;  1B59 A;  1C23 A;  1WL9 A;  3CB5 A;  1XGS A;  1M35 A;  2BWX A;  4FUK A;  3MR1 A;  4S00 A;  4RZZ A;  1QZY A;  1WN1 A;  2BWT A;  1YVM A;  1R5H A;  1WLR A;  1C22 A;  4ZWU A;  2BWS A;  1C21 A;  2OAZ A;  4HXX A;  4FO8 A;  2Q8K A;  2BN7 A;  1WKM A;  2GG2 A;  3BIQ A;  2IW2 A;  3Q6D A;  2BHC A;  4U6Z A;  3RVA A;  3BIP A;  4QR8 A;  2B3K A;  2GU5 A;  5CLS A;  4U69 A;  1W2M A;  2GGC A;  2GU6 A;  4IEC A;  1XGN A;  4A6W A;  1C27 A;  1QXW A;  3IU7 A;  3PKD A;  1KQ9 A;  4ZWO A;  2GU7 A;  3L24 A;  4S2R P;  4FO7 A;  5FCH A;  1XGO A;  4FLL A;  1KQ0 A;  2BWU A;  2V3X A;  1XGM A;  2GG8 A;  3PKB A;  5CIK A;  4KM3 A;  5E5B A;  2B3L A;  2BHB A;  2V6C A;  4PV4 A; 
#chains in the Genus database with same CATH homology
 4FLJ A;  2P99 A;  1YJ3 A;  1C24 A;  2GZ5 A;  1PV9 A;  5JHU A;  3IG4 A;  1YW7 A;  2NQ7 A;  2EA2 A;  3L7G A;  4RZY A;  3MAT A;  4S01 A;  2B3H A;  4U76 A;  4U6C A;  4U75 A;  3TB5 A;  4EGE A;  4IPA A;  5CDE A;  2BWW A;  1WBQ A;  4Z7M A;  1XNZ A;  2Q94 A;  2BH3 A;  3IU9 A;  4U73 A;  5D6F A;  5FCF A;  3IU8 A;  4IKT A;  2G6P A;  1BOA A;  3FM3 A;  3PKC A;  3BIT A;  2P98 A;  3FMR A;  3ROR A;  2P9A A;  2ADU A;  2EVC A;  1YW8 A;  2GG0 A;  3D27 A;  2GG9 A;  4U1B A;  4U71 A;  1BN5 A;  2MAT A;  3FMQ A;  5JI6 A;  2DFI A;  2Q95 A;  1W7V A;  3CB6 A;  2GA2 A;  1QXZ A;  2EVO A;  2HOW A;  4IKS A;  3TAV A;  2EA4 A;  2V3Y A;  4MAT A;  2OKN A;  4OOK A;  4S2T P;  2BWV A;  2EVM A;  1KP0 A;  4IDY A;  4A6V A;  3CTZ A;  1QXY A;  4FKC A;  4U70 A;  4RGZ 1;  5JFR A;  4IKR A;  1JAW A;  4PNC A;  2Q93 A;  3PKE A;  1CHM A;  1WL6 A;  2ZSG A;  5CDV A;  2BWY A;  2GG5 A;  2GG7 A;  3PKA A;  2Q96 A;  4FLI A;  1WY2 A;  4R60 A;  2GG3 A;  1YW9 A;  3MX6 A;  2BHA A;  1A16 A;  4U6E A;  5CNX A;  2V3Z A;  1N51 A;  5CE6 A;  2GU4 A;  1MAT A;  4JUQ A;  4B28 A;  2NQ6 A;  4ZWP A;  3S6B A;  1O0X A;  1R58 A;  4FLK A;  4U6J A;  1R5G A;  2GGB A;  5D6E A;  2BB7 A;  1Y1N A;  4IF7 A;  4U6W A;  2GTX A;  4IU6 A;  4IKU A;  2Q92 A;  2BHD A;  4ZNG A;  5CDL A;  1B6A A;  1B59 A;  1C23 A;  1WL9 A;  3CB5 A;  1XGS A;  1M35 A;  2BWX A;  4FUK A;  3MR1 A;  4S00 A;  4RZZ A;  1QZY A;  1WN1 A;  2BWT A;  1YVM A;  1R5H A;  1WLR A;  1C22 A;  4ZWU A;  2BWS A;  1C21 A;  2OAZ A;  4HXX A;  4FO8 A;  2Q8K A;  2BN7 A;  1WKM A;  2GG2 A;  3BIQ A;  2IW2 A;  3Q6D A;  2BHC A;  4U6Z A;  3RVA A;  3BIP A;  4QR8 A;  2B3K A;  2GU5 A;  5CLS A;  4U69 A;  1W2M A;  2GGC A;  2GU6 A;  4IEC A;  1XGN A;  4A6W A;  1C27 A;  1QXW A;  3IU7 A;  3PKD A;  1KQ9 A;  4ZWO A;  2GU7 A;  3L24 A;  4S2R P;  4FO7 A;  5FCH A;  1XGO A;  4FLL A;  1KQ0 A;  2BWU A;  2V3X A;  1XGM A;  2GG8 A;  3PKB A;  5CIK A;  4KM3 A;  5E5B A;  2B3L A;  2BHB A;  2V6C A;  4PV4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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