3Q6DA

Xaa-pro dipeptidase from bacillus anthracis.
Total Genus 126
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
126
sequence length
355
structure length
355
Chain Sequence
NAMEKIERLRSAFDEAGIDGILLTNEHSRRYMANFTGTAGVVLISKKRAQFITDFRYVEQASKQAVGYEIVQHAGLIIDEVAKQVKELGIQKLGFEQDTLTYSSYSAHKEAIDAEFIPTSGLVEKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMRKQGATSSSFDIIVASGLRSALPHGVASEKVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYITEKGYGEYFGHSTGHGIGLEIHEAPGLAFRSDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVTSEGNEVITKSPKELIIL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Xaa-Pro dipeptidase from Bacillus anthracis.
rcsb
source organism Bacillus anthracis
molecule tags Viral protein
molecule keywords Proline dipeptidase
total genus 126
structure length 355
sequence length 355
chains with identical sequence B, C, D
ec nomenclature ec 3.4.13.9: Xaa-Pro dipeptidase.
pdb deposition date 2010-12-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF01321 Creatinase_N Creatinase/Prolidase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 3q6dA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3q6dA02
5D6FA 2GG9A 4FO7A 1B59A 1A16A 2EVOA 4U76A 4PNCA 5CDEA 1CHMA 1C27A 1YW7A 2GTXA 5D6EA 3BITA 3PN9A 2GG8A 3I7MA 1YW9A 2OAZA 2BWUA 3IU9A 2V3YA 3IL0A 2P98A 4IKRA 4IKSA 3O5VA 2V3XA 4FUKA 3PKBA 2NQ6A 3MX6A 5JFRA 3FM3A 2BN7A 4ZWOA 4U6EA 3FMRA 1YJ3A 4U6CA 2BHDA 2GG3A 1WKMA 3CTZA 4FLIA 4S00A 4IDYA 5JI6A 1N51A 2BHCA 2EVMA 2NQ7A 4U6ZA 3TAVA 1Y1NA 4EGEA 2Q92A 2BWTA 1WBQA 4FLLA 2GU7A 4RGZ1 2GU5A 3RVAA 2Q94A 3BIQA 4HXXA 1W2MA 4U1BA 4U69A 3TB5A 1C24A 2GA2A 3PKEA 1KP0A 1BOAA 2GG2A 2BWWA 2EA4A 3L7GA 1KQ9A 5FCHA 1QXYA 3FMQA 1C23A 2EVCA 2ADUA 1WLRA 4KM3A 2MATA 2V3ZA 1JAWA 5CIKA 3RORA 1QZYA 2BWYA 2IW2A 4IKUA 4QR8A 2GG0A 4B28A 1R5GA 1YW8A 1YVMA 4RZZA 1R5HA 5CE6A 4ZNGA 2Q8KA 4S2TP 5CNXA 4S01A 3Q6DA 1MATA 2EA2A 2GGCA 3CB5A 3IG4A 3OVKA 1XGOA 4FKCA 5E5BA 4U71A 5JHUA 1WN1A 3L24A 2DFIA 3CB6A 2P9AA 2GG7A 2Q93A 2ZSGA 3PEBA 2BB7A 4FO8A 2Q96A 3BIPA 1WY2A 1M35A 1WL9A 4ZWPA 2B3HA 3QOCA 4U6JA 4U75A 4R60A 1KQ0A 4IU6A 4U73A 5CLSA 2BWVA 2G6PA 3PKAA 4IPAA 3IU8A 4OOKA 4IECA 2GGBA 3D27A 4Z7MA 2HOWA 4U6WA 3PKCA 4RZYA 5CDLA 1XGMA 1W7VA 2BHAA 4MATA 2GU6A 1C21A 1QXZA 2B3LA 4A6VA 3OOOA 2V6CA 4U70A 1BN5A 5CDVA 2GU4A 5FCFA 4FLKA 3PKDA 3S6BA 1C22A 1XNZA 4IF7A 2BH3A 1WL6A 3IU7A 4A6WA 4FLJA 4PV4A 2BWSA 2GG5A 2GZ5A 4JUQA 2B3KA 1R58A 2BHBA 1QXWA 3MATA 4ZWUA 2OKNA 4IKTA 1XGNA 5E2CA 2BWXA 1PV9A 1XGSA 2Q95A 4S2RP 2P99A 1O0XA 1B6AA 3MR1A
chains in the Genus database with same CATH superfamily
5D6FA 2GG9A 4FO7A 1B59A 1A16A 2EVOA 4U76A 4PNCA 5CDEA 1CHMA 1C27A 1YW7A 2GTXA 5D6EA 3BITA 3PN9A 2GG8A 3I7MA 1YW9A 2OAZA 2BWUA 3IU9A 2V3YA 3IL0A 2P98A 4IKRA 4IKSA 3O5VA 2V3XA 4FUKA 3PKBA 2NQ6A 3MX6A 5JFRA 3FM3A 2BN7A 4ZWOA 4U6EA 3FMRA 1YJ3A 4U6CA 2BHDA 2GG3A 1WKMA 3CTZA 4FLIA 4S00A 4IDYA 5JI6A 1N51A 2BHCA 2EVMA 2NQ7A 4U6ZA 3TAVA 1Y1NA 4EGEA 2Q92A 2BWTA 1WBQA 4FLLA 2GU7A 4RGZ1 2GU5A 3RVAA 2Q94A 3BIQA 4HXXA 1W2MA 4U1BA 4U69A 3TB5A 1C24A 2GA2A 3PKEA 1KP0A 1BOAA 2GG2A 2BWWA 2EA4A 3L7GA 1KQ9A 5FCHA 1QXYA 3FMQA 1C23A 2EVCA 2ADUA 1WLRA 4KM3A 2MATA 2V3ZA 1JAWA 5CIKA 3RORA 1QZYA 2BWYA 2IW2A 4IKUA 4QR8A 2GG0A 4B28A 1R5GA 1YW8A 1YVMA 4RZZA 1R5HA 5CE6A 4ZNGA 2Q8KA 4S2TP 5CNXA 4S01A 3Q6DA 1MATA 2EA2A 2GGCA 3CB5A 3IG4A 3OVKA 1XGOA 4FKCA 5E5BA 4U71A 5JHUA 1WN1A 3L24A 2DFIA 3CB6A 2P9AA 2GG7A 2Q93A 2ZSGA 3PEBA 2BB7A 4FO8A 2Q96A 3BIPA 1WY2A 1M35A 1WL9A 4ZWPA 2B3HA 3QOCA 4U6JA 4U75A 4R60A 1KQ0A 4IU6A 4U73A 5CLSA 2BWVA 2G6PA 3PKAA 4IPAA 3IU8A 4OOKA 4IECA 2GGBA 3D27A 4Z7MA 2HOWA 4U6WA 3PKCA 4RZYA 5CDLA 1XGMA 1W7VA 2BHAA 4MATA 2GU6A 1C21A 1QXZA 2B3LA 4A6VA 3OOOA 2V6CA 4U70A 1BN5A 5CDVA 2GU4A 5FCFA 4FLKA 3PKDA 3S6BA 1C22A 1XNZA 4IF7A 2BH3A 1WL6A 3IU7A 4A6WA 4FLJA 4PV4A 2BWSA 2GG5A 2GZ5A 4JUQA 2B3KA 1R58A 2BHBA 1QXWA 3MATA 4ZWUA 2OKNA 4IKTA 1XGNA 5E2CA 2BWXA 1PV9A 1XGSA 2Q95A 4S2RP 2P99A 1O0XA 1B6AA 3MR1A
chains in the Genus database with same CATH topology
5D6FA 2GG9A 4FO7A 1B59A 1A16A 2EVOA 4U76A 4PNCA 5CDEA 1CHMA 1C27A 1YW7A 2GTXA 5D6EA 3BITA 3PN9A 2GG8A 3I7MA 1YW9A 2OAZA 2BWUA 3IU9A 2V3YA 3IL0A 2P98A 4IKRA 4IKSA 3O5VA 2V3XA 4FUKA 3PKBA 2NQ6A 3MX6A 5JFRA 3FM3A 2BN7A 4ZWOA 4U6EA 3FMRA 1YJ3A 4U6CA 2BHDA 2GG3A 1WKMA 3CTZA 4FLIA 4S00A 4IDYA 5JI6A 1N51A 2BHCA 2EVMA 2NQ7A 4U6ZA 3TAVA 1Y1NA 4EGEA 2Q92A 2BWTA 1WBQA 4FLLA 2GU7A 4RGZ1 2GU5A 3RVAA 2Q94A 3BIQA 4HXXA 1W2MA 4U1BA 4U69A 3TB5A 1C24A 2GA2A 3PKEA 1KP0A 1BOAA 2GG2A 2BWWA 2EA4A 3L7GA 1KQ9A 5FCHA 1QXYA 3FMQA 1C23A 2EVCA 2ADUA 1WLRA 4KM3A 2MATA 2V3ZA 1JAWA 5CIKA 3RORA 1QZYA 2BWYA 2IW2A 4IKUA 4QR8A 2GG0A 4B28A 1R5GA 1YW8A 1YVMA 4RZZA 1R5HA 5CE6A 4ZNGA 2Q8KA 4S2TP 5CNXA 4S01A 3Q6DA 1MATA 2EA2A 2GGCA 3CB5A 3IG4A 3OVKA 1XGOA 4FKCA 5E5BA 4U71A 5JHUA 1WN1A 3L24A 2DFIA 3CB6A 2P9AA 2GG7A 2Q93A 2ZSGA 3PEBA 2BB7A 4FO8A 2Q96A 3BIPA 1WY2A 1M35A 1WL9A 4ZWPA 2B3HA 3QOCA 4U6JA 4U75A 4R60A 1KQ0A 4IU6A 4U73A 5CLSA 2BWVA 2G6PA 3PKAA 4IPAA 3IU8A 4OOKA 4IECA 2GGBA 3D27A 4Z7MA 2HOWA 4U6WA 3PKCA 4RZYA 5CDLA 1XGMA 1W7VA 2BHAA 4MATA 2GU6A 1C21A 1QXZA 2B3LA 4A6VA 3OOOA 2V6CA 4U70A 1BN5A 5CDVA 2GU4A 5FCFA 4FLKA 3PKDA 3S6BA 1C22A 1XNZA 4IF7A 2BH3A 1WL6A 3IU7A 4A6WA 4FLJA 4PV4A 2BWSA 2GG5A 2GZ5A 4JUQA 2B3KA 1R58A 2BHBA 1QXWA 3MATA 4ZWUA 2OKNA 4IKTA 1XGNA 5E2CA 2BWXA 1PV9A 1XGSA 2Q95A 4S2RP 2P99A 1O0XA 1B6AA 3MR1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5D6F A;  2GG9 A;  4FO7 A;  1B59 A;  1A16 A;  2EVO A;  4U76 A;  4PNC A;  5CDE A;  1CHM A;  1C27 A;  1YW7 A;  2GTX A;  5D6E A;  3BIT A;  3PN9 A;  2GG8 A;  3I7M A;  1YW9 A;  2OAZ A;  2BWU A;  3IU9 A;  2V3Y A;  3IL0 A;  2P98 A;  4IKR A;  4IKS A;  3O5V A;  2V3X A;  4FUK A;  3PKB A;  2NQ6 A;  3MX6 A;  5JFR A;  3FM3 A;  2BN7 A;  4ZWO A;  4U6E A;  3FMR A;  1YJ3 A;  4U6C A;  2BHD A;  2GG3 A;  1WKM A;  3CTZ A;  4FLI A;  4S00 A;  4IDY A;  5JI6 A;  1N51 A;  2BHC A;  2EVM A;  2NQ7 A;  4U6Z A;  3TAV A;  1Y1N A;  4EGE A;  2Q92 A;  2BWT A;  1WBQ A;  4FLL A;  2GU7 A;  4RGZ 1;  2GU5 A;  3RVA A;  2Q94 A;  3BIQ A;  4HXX A;  1W2M A;  4U1B A;  4U69 A;  3TB5 A;  1C24 A;  2GA2 A;  3PKE A;  1KP0 A;  1BOA A;  2GG2 A;  2BWW A;  2EA4 A;  3L7G A;  1KQ9 A;  5FCH A;  1QXY A;  3FMQ A;  1C23 A;  2EVC A;  2ADU A;  1WLR A;  4KM3 A;  2MAT A;  2V3Z A;  1JAW A;  5CIK A;  3ROR A;  1QZY A;  2BWY A;  2IW2 A;  4IKU A;  4QR8 A;  2GG0 A;  4B28 A;  1R5G A;  1YW8 A;  1YVM A;  4RZZ A;  1R5H A;  5CE6 A;  4ZNG A;  2Q8K A;  4S2T P;  5CNX A;  4S01 A;  3Q6D A;  1MAT A;  2EA2 A;  2GGC A;  3CB5 A;  3IG4 A;  3OVK A;  1XGO A;  4FKC A;  5E5B A;  4U71 A;  5JHU A;  1WN1 A;  3L24 A;  2DFI A;  3CB6 A;  2P9A A;  2GG7 A;  2Q93 A;  2ZSG A;  3PEB A;  2BB7 A;  4FO8 A;  2Q96 A;  3BIP A;  1WY2 A;  1M35 A;  1WL9 A;  4ZWP A;  2B3H A;  3QOC A;  4U6J A;  4U75 A;  4R60 A;  1KQ0 A;  4IU6 A;  4U73 A;  5CLS A;  2BWV A;  2G6P A;  3PKA A;  4IPA A;  3IU8 A;  4OOK A;  4IEC A;  2GGB A;  3D27 A;  4Z7M A;  2HOW A;  4U6W A;  3PKC A;  4RZY A;  5CDL A;  1XGM A;  1W7V A;  2BHA A;  4MAT A;  2GU6 A;  1C21 A;  1QXZ A;  2B3L A;  4A6V A;  3OOO A;  2V6C A;  4U70 A;  1BN5 A;  5CDV A;  2GU4 A;  5FCF A;  4FLK A;  3PKD A;  3S6B A;  1C22 A;  1XNZ A;  4IF7 A;  2BH3 A;  1WL6 A;  3IU7 A;  4A6W A;  4FLJ A;  4PV4 A;  2BWS A;  2GG5 A;  2GZ5 A;  4JUQ A;  2B3K A;  1R58 A;  2BHB A;  1QXW A;  3MAT A;  4ZWU A;  2OKN A;  4IKT A;  1XGN A;  5E2C A;  2BWX A;  1PV9 A;  1XGS A;  2Q95 A;  4S2R P;  2P99 A;  1O0X A;  1B6A A;  3MR1 A; 
#chains in the Genus database with same CATH topology
 5D6F A;  2GG9 A;  4FO7 A;  1B59 A;  1A16 A;  2EVO A;  4U76 A;  4PNC A;  5CDE A;  1CHM A;  1C27 A;  1YW7 A;  2GTX A;  5D6E A;  3BIT A;  3PN9 A;  2GG8 A;  3I7M A;  1YW9 A;  2OAZ A;  2BWU A;  3IU9 A;  2V3Y A;  3IL0 A;  2P98 A;  4IKR A;  4IKS A;  3O5V A;  2V3X A;  4FUK A;  3PKB A;  2NQ6 A;  3MX6 A;  5JFR A;  3FM3 A;  2BN7 A;  4ZWO A;  4U6E A;  3FMR A;  1YJ3 A;  4U6C A;  2BHD A;  2GG3 A;  1WKM A;  3CTZ A;  4FLI A;  4S00 A;  4IDY A;  5JI6 A;  1N51 A;  2BHC A;  2EVM A;  2NQ7 A;  4U6Z A;  3TAV A;  1Y1N A;  4EGE A;  2Q92 A;  2BWT A;  1WBQ A;  4FLL A;  2GU7 A;  4RGZ 1;  2GU5 A;  3RVA A;  2Q94 A;  3BIQ A;  4HXX A;  1W2M A;  4U1B A;  4U69 A;  3TB5 A;  1C24 A;  2GA2 A;  3PKE A;  1KP0 A;  1BOA A;  2GG2 A;  2BWW A;  2EA4 A;  3L7G A;  1KQ9 A;  5FCH A;  1QXY A;  3FMQ A;  1C23 A;  2EVC A;  2ADU A;  1WLR A;  4KM3 A;  2MAT A;  2V3Z A;  1JAW A;  5CIK A;  3ROR A;  1QZY A;  2BWY A;  2IW2 A;  4IKU A;  4QR8 A;  2GG0 A;  4B28 A;  1R5G A;  1YW8 A;  1YVM A;  4RZZ A;  1R5H A;  5CE6 A;  4ZNG A;  2Q8K A;  4S2T P;  5CNX A;  4S01 A;  3Q6D A;  1MAT A;  2EA2 A;  2GGC A;  3CB5 A;  3IG4 A;  3OVK A;  1XGO A;  4FKC A;  5E5B A;  4U71 A;  5JHU A;  1WN1 A;  3L24 A;  2DFI A;  3CB6 A;  2P9A A;  2GG7 A;  2Q93 A;  2ZSG A;  3PEB A;  2BB7 A;  4FO8 A;  2Q96 A;  3BIP A;  1WY2 A;  1M35 A;  1WL9 A;  4ZWP A;  2B3H A;  3QOC A;  4U6J A;  4U75 A;  4R60 A;  1KQ0 A;  4IU6 A;  4U73 A;  5CLS A;  2BWV A;  2G6P A;  3PKA A;  4IPA A;  3IU8 A;  4OOK A;  4IEC A;  2GGB A;  3D27 A;  4Z7M A;  2HOW A;  4U6W A;  3PKC A;  4RZY A;  5CDL A;  1XGM A;  1W7V A;  2BHA A;  4MAT A;  2GU6 A;  1C21 A;  1QXZ A;  2B3L A;  4A6V A;  3OOO A;  2V6C A;  4U70 A;  1BN5 A;  5CDV A;  2GU4 A;  5FCF A;  4FLK A;  3PKD A;  3S6B A;  1C22 A;  1XNZ A;  4IF7 A;  2BH3 A;  1WL6 A;  3IU7 A;  4A6W A;  4FLJ A;  4PV4 A;  2BWS A;  2GG5 A;  2GZ5 A;  4JUQ A;  2B3K A;  1R58 A;  2BHB A;  1QXW A;  3MAT A;  4ZWU A;  2OKN A;  4IKT A;  1XGN A;  5E2C A;  2BWX A;  1PV9 A;  1XGS A;  2Q95 A;  4S2R P;  2P99 A;  1O0X A;  1B6A A;  3MR1 A; 
#chains in the Genus database with same CATH homology
 5D6F A;  2GG9 A;  4FO7 A;  1B59 A;  1A16 A;  2EVO A;  4U76 A;  4PNC A;  5CDE A;  1CHM A;  1C27 A;  1YW7 A;  2GTX A;  5D6E A;  3BIT A;  3PN9 A;  2GG8 A;  3I7M A;  1YW9 A;  2OAZ A;  2BWU A;  3IU9 A;  2V3Y A;  3IL0 A;  2P98 A;  4IKR A;  4IKS A;  3O5V A;  2V3X A;  4FUK A;  3PKB A;  2NQ6 A;  3MX6 A;  5JFR A;  3FM3 A;  2BN7 A;  4ZWO A;  4U6E A;  3FMR A;  1YJ3 A;  4U6C A;  2BHD A;  2GG3 A;  1WKM A;  3CTZ A;  4FLI A;  4S00 A;  4IDY A;  5JI6 A;  1N51 A;  2BHC A;  2EVM A;  2NQ7 A;  4U6Z A;  3TAV A;  1Y1N A;  4EGE A;  2Q92 A;  2BWT A;  1WBQ A;  4FLL A;  2GU7 A;  4RGZ 1;  2GU5 A;  3RVA A;  2Q94 A;  3BIQ A;  4HXX A;  1W2M A;  4U1B A;  4U69 A;  3TB5 A;  1C24 A;  2GA2 A;  3PKE A;  1KP0 A;  1BOA A;  2GG2 A;  2BWW A;  2EA4 A;  3L7G A;  1KQ9 A;  5FCH A;  1QXY A;  3FMQ A;  1C23 A;  2EVC A;  2ADU A;  1WLR A;  4KM3 A;  2MAT A;  2V3Z A;  1JAW A;  5CIK A;  3ROR A;  1QZY A;  2BWY A;  2IW2 A;  4IKU A;  4QR8 A;  2GG0 A;  4B28 A;  1R5G A;  1YW8 A;  1YVM A;  4RZZ A;  1R5H A;  5CE6 A;  4ZNG A;  2Q8K A;  4S2T P;  5CNX A;  4S01 A;  3Q6D A;  1MAT A;  2EA2 A;  2GGC A;  3CB5 A;  3IG4 A;  3OVK A;  1XGO A;  4FKC A;  5E5B A;  4U71 A;  5JHU A;  1WN1 A;  3L24 A;  2DFI A;  3CB6 A;  2P9A A;  2GG7 A;  2Q93 A;  2ZSG A;  3PEB A;  2BB7 A;  4FO8 A;  2Q96 A;  3BIP A;  1WY2 A;  1M35 A;  1WL9 A;  4ZWP A;  2B3H A;  3QOC A;  4U6J A;  4U75 A;  4R60 A;  1KQ0 A;  4IU6 A;  4U73 A;  5CLS A;  2BWV A;  2G6P A;  3PKA A;  4IPA A;  3IU8 A;  4OOK A;  4IEC A;  2GGB A;  3D27 A;  4Z7M A;  2HOW A;  4U6W A;  3PKC A;  4RZY A;  5CDL A;  1XGM A;  1W7V A;  2BHA A;  4MAT A;  2GU6 A;  1C21 A;  1QXZ A;  2B3L A;  4A6V A;  3OOO A;  2V6C A;  4U70 A;  1BN5 A;  5CDV A;  2GU4 A;  5FCF A;  4FLK A;  3PKD A;  3S6B A;  1C22 A;  1XNZ A;  4IF7 A;  2BH3 A;  1WL6 A;  3IU7 A;  4A6W A;  4FLJ A;  4PV4 A;  2BWS A;  2GG5 A;  2GZ5 A;  4JUQ A;  2B3K A;  1R58 A;  2BHB A;  1QXW A;  3MAT A;  4ZWU A;  2OKN A;  4IKT A;  1XGN A;  5E2C A;  2BWX A;  1PV9 A;  1XGS A;  2Q95 A;  4S2R P;  2P99 A;  1O0X A;  1B6A A;  3MR1 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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