3ROIA

2.20 angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (aroa) from coxiella burnetii
Total Genus 137
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
137
sequence length
436
structure length
431
Chain Sequence
AMDYQTIPSQGLSGEICVPGDKSISHRAVLLAAIAEGQTQVDGFLMGADNLAMVSALQQMGASIQVIEDENILVVEGVGMTGLQAPPEALDCGNSGTAIRLLSGLLAGQPFNTVLTGDSSLQRRPMKRIIDPLTLMGAKIDSTGNVPPLKIYGNPRLTGIHYQLPMASAQVKSCLLLAGLYARGKTCITEPAPSRDHTERLLKHFHYTLQSICVSGGGKLKANDISIPGDISSAAFFIVAATITPGSAIRLCRVGVNPTRLGVINLLKMMGADIEVTHYTEKNEPTADITVRHARLKGIDIPPDQVPLTIDEFPVLLIAAAVAQGKTVLRDAAELRVKETDRIAAMVDGLQKLGIAAESLPDGVIIQGGTLEGGEVNSYDDHRIAMAFAVAGTLAKGPVRIRNCDNVKTSFPNFVELANEVGMNVKGVRGR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords 3-phosphoshikimate 1-carboxyvinyltransferase
publication title 2.20 Angstrom resolution structure of 3-phosphoshikimate 1-carboxyvinyltransferase (AroA) from Coxiella burnetii
rcsb
source organism Coxiella burnetii
total genus 137
structure length 431
sequence length 436
chains with identical sequence B
ec nomenclature ec 2.5.1.19: 3-phosphoshikimate 1-carboxyvinyltransferase.
pdb deposition date 2011-04-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3roiA02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3roiA01
2QFQA 3SWGA 4E7CA 2GGDA 3KQJA 4FQDA 4E7BA 2BJBA 3V5VA 3SPBA 1MI4A 2O0DA 1YBGA 1EYNA 3TR1A 3SG1A 2YVWA 2PQ9A 3KR6A 4E7DA 3SWDA 1RF5A 2O0EA 2O0BA 2PQDA 4EGRA 2Z2CA 2O0XA 2PQBA 3FK0A 3FK1A 2AAYA 3ZH3A 2PQCA 3ISSA 4R7UA 3UPKA 3KQAA 3ZH4A 3VCYA 5BUFA 5BS5A 3SWAA 1DLGA 1NAWA 1G6TA 2O15A 4EIIA 3ROIA 1P88A 2AA9A 2GG6A 4E7EA 3SU9A 1RYWA 4E7GA 1A2NA 1EJDA 3FJXA 1Q3GA 1G6SA 4E7FA 1RF6A 3FJZA 2GGAA 5U4HA 1RF4A 2RL1A 4GFPA 4ZNDA 1X8RA 1UAEA 2GG4A 3NVSA 3TI2A 3RMTA 3SWIA 2QFSA 2QFTA 3V4TA 2QFUA 3SWEA 1EJCA 1P89A 2RL2A 3LTHA 3SLHA 3SWQA 3R38A 4N3PA 5BQ2A 2O0ZA 1Q36A 1X8TA
chains in the Genus database with same CATH superfamily
2QFQA 3SWGA 3TV1A 4E7CA 2GGDA 3KQJA 4FQDA 4E7BA 2BJBA 3KGDA 3V5VA 3SPBA 1MI4A 2O0DA 1YBGA 1EYNA 3TR1A 1QMIA 3SG1A 2YVWA 2PQ9A 3KR6A 4E7DA 3SWDA 1RF5A 2O0EA 3PQVA 2O0BA 2PQDA 4EGRA 2Z2CA 2O0XA 2PQBA 3FK0A 3FK1A 2AAYA 3ZH3A 2PQCA 3ISSA 4R7UA 3UPKA 3KQAA 3ZH4A 3VCYA 5BUFA 3TUXA 5BS5A 3SWAA 4O89A 1DLGA 1NAWA 1G6TA 2O15A 4EIIA 3ROIA 1P88A 2AA9A 2GG6A 4E7EA 3SU9A 1RYWA 4E7GA 4O8JA 1A2NA 3TUTA 1EJDA 3FJXA 1Q3GA 1G6SA 4E7FA 1RF6A 3FJZA 2GGAA 5U4HA 3TW3A 1RF4A 2RL1A 4GFPA 4ZNDA 1X8RA 4CLQA 1UAEA 2GG4A 3NVSA 3TI2A 3RMTA 3SWIA 2QFSA 2QFTA 3V4TA 2QFUA 3SWEA 1EJCA 1P89A 2RL2A 3LTHA 3SLHA 3SWQA 3R38A 4N3PA 5BQ2A 2O0ZA 1Q36A 1QMHA 1X8TA
chains in the Genus database with same CATH topology
2QFQA 3SWGA 4E7CA 2GGDA 3KQJA 4FQDA 4E7BA 2BJBA 3V5VA 3SPBA 1MI4A 2O0DA 1YBGA 1EYNA 3TR1A 3SG1A 2YVWA 2PQ9A 3KR6A 4E7DA 3SWDA 1RF5A 2O0EA 2O0BA 2PQDA 4EGRA 2Z2CA 2O0XA 2PQBA 3FK0A 3FK1A 2AAYA 3ZH3A 2PQCA 3ISSA 4R7UA 3UPKA 3KQAA 3ZH4A 3VCYA 5BUFA 5BS5A 3SWAA 1DLGA 1NAWA 1G6TA 2O15A 4EIIA 3ROIA 1P88A 2AA9A 2GG6A 4E7EA 3SU9A 1RYWA 4E7GA 1A2NA 1EJDA 3FJXA 1Q3GA 1G6SA 4E7FA 1RF6A 3FJZA 2GGAA 5U4HA 1RF4A 2RL1A 4GFPA 4ZNDA 1X8RA 1UAEA 2GG4A 3NVSA 3TI2A 3RMTA 3SWIA 2QFSA 2QFTA 3V4TA 2QFUA 3SWEA 1EJCA 1P89A 2RL2A 3LTHA 3SLHA 3SWQA 3R38A 4N3PA 5BQ2A 2O0ZA 1Q36A 1X8TA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2QFQ A;  3SWG A;  4E7C A;  2GGD A;  3KQJ A;  4FQD A;  4E7B A;  2BJB A;  3V5V A;  3SPB A;  1MI4 A;  2O0D A;  1YBG A;  1EYN A;  3TR1 A;  3SG1 A;  2YVW A;  2PQ9 A;  3KR6 A;  4E7D A;  3SWD A;  1RF5 A;  2O0E A;  2O0B A;  2PQD A;  4EGR A;  2Z2C A;  2O0X A;  2PQB A;  3FK0 A;  3FK1 A;  2AAY A;  3ZH3 A;  2PQC A;  3ISS A;  4R7U A;  3UPK A;  3KQA A;  3ZH4 A;  3VCY A;  5BUF A;  5BS5 A;  3SWA A;  1DLG A;  1NAW A;  1G6T A;  2O15 A;  4EII A;  3ROI A;  1P88 A;  2AA9 A;  2GG6 A;  4E7E A;  3SU9 A;  1RYW A;  4E7G A;  1A2N A;  1EJD A;  3FJX A;  1Q3G A;  1G6S A;  4E7F A;  1RF6 A;  3FJZ A;  2GGA A;  5U4H A;  1RF4 A;  2RL1 A;  4GFP A;  4ZND A;  1X8R A;  1UAE A;  2GG4 A;  3NVS A;  3TI2 A;  3RMT A;  3SWI A;  2QFS A;  2QFT A;  3V4T A;  2QFU A;  3SWE A;  1EJC A;  1P89 A;  2RL2 A;  3LTH A;  3SLH A;  3SWQ A;  3R38 A;  4N3P A;  5BQ2 A;  2O0Z A;  1Q36 A;  1X8T A; 
#chains in the Genus database with same CATH topology
 2QFQ A;  3SWG A;  3TV1 A;  4E7C A;  2GGD A;  3KQJ A;  4FQD A;  4E7B A;  2BJB A;  3KGD A;  3V5V A;  3SPB A;  1MI4 A;  2O0D A;  1YBG A;  1EYN A;  3TR1 A;  1QMI A;  3SG1 A;  2YVW A;  2PQ9 A;  3KR6 A;  4E7D A;  3SWD A;  1RF5 A;  2O0E A;  3PQV A;  2O0B A;  2PQD A;  4EGR A;  2Z2C A;  2O0X A;  2PQB A;  3FK0 A;  3FK1 A;  2AAY A;  3ZH3 A;  2PQC A;  3ISS A;  4R7U A;  3UPK A;  3KQA A;  3ZH4 A;  3VCY A;  5BUF A;  3TUX A;  5BS5 A;  3SWA A;  4O89 A;  1DLG A;  1NAW A;  1G6T A;  2O15 A;  4EII A;  3ROI A;  1P88 A;  2AA9 A;  2GG6 A;  4E7E A;  3SU9 A;  1RYW A;  4E7G A;  4O8J A;  1A2N A;  3TUT A;  1EJD A;  3FJX A;  1Q3G A;  1G6S A;  4E7F A;  1RF6 A;  3FJZ A;  2GGA A;  5U4H A;  3TW3 A;  1RF4 A;  2RL1 A;  4GFP A;  4ZND A;  1X8R A;  4CLQ A;  1UAE A;  2GG4 A;  3NVS A;  3TI2 A;  3RMT A;  3SWI A;  2QFS A;  2QFT A;  3V4T A;  2QFU A;  3SWE A;  1EJC A;  1P89 A;  2RL2 A;  3LTH A;  3SLH A;  3SWQ A;  3R38 A;  4N3P A;  5BQ2 A;  2O0Z A;  1Q36 A;  1QMH A;  1X8T A; 
#chains in the Genus database with same CATH homology
 2QFQ A;  3SWG A;  4E7C A;  2GGD A;  3KQJ A;  4FQD A;  4E7B A;  2BJB A;  3V5V A;  3SPB A;  1MI4 A;  2O0D A;  1YBG A;  1EYN A;  3TR1 A;  3SG1 A;  2YVW A;  2PQ9 A;  3KR6 A;  4E7D A;  3SWD A;  1RF5 A;  2O0E A;  2O0B A;  2PQD A;  4EGR A;  2Z2C A;  2O0X A;  2PQB A;  3FK0 A;  3FK1 A;  2AAY A;  3ZH3 A;  2PQC A;  3ISS A;  4R7U A;  3UPK A;  3KQA A;  3ZH4 A;  3VCY A;  5BUF A;  5BS5 A;  3SWA A;  1DLG A;  1NAW A;  1G6T A;  2O15 A;  4EII A;  3ROI A;  1P88 A;  2AA9 A;  2GG6 A;  4E7E A;  3SU9 A;  1RYW A;  4E7G A;  1A2N A;  1EJD A;  3FJX A;  1Q3G A;  1G6S A;  4E7F A;  1RF6 A;  3FJZ A;  2GGA A;  5U4H A;  1RF4 A;  2RL1 A;  4GFP A;  4ZND A;  1X8R A;  1UAE A;  2GG4 A;  3NVS A;  3TI2 A;  3RMT A;  3SWI A;  2QFS A;  2QFT A;  3V4T A;  2QFU A;  3SWE A;  1EJC A;  1P89 A;  2RL2 A;  3LTH A;  3SLH A;  3SWQ A;  3R38 A;  4N3P A;  5BQ2 A;  2O0Z A;  1Q36 A;  1X8T A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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