3RVAA

Crystal structure of organophosphorus acid anhydrolase from alteromonas macleodii
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
445
structure length
444
Chain Sequence
SQHKATYQQHIEELQARTREALQREGLDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDFWHKVPPEPNDFWTDSFDIKLLQQADAVEKFLPYDKSRFAYVGEYIEVAKALGFDNVNPDRVLHYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFDINLAYAAASRQGDNDVPYTSIVALNEHASILHYMQDTVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLGLQVHDVGGLVNDDRGTPKPAPDDHPFLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRDKNENMTRDLDLNLEH
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Organophosphorus acid anhydrolase
publication title Organophosphorus acid anhydrolase from Alteromonas macleodii: structural study and functional relationship to prolidases.
pubmed doi rcsb
source organism Alteromonas macleodii
total genus 159
structure length 444
sequence length 445
ec nomenclature ec 3.1.8.2: Diisopropyl-fluorophosphatase.
pdb deposition date 2011-05-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 3rvaA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3rvaA02
2V3XA 2MATA 2DFIA 2HOWA 4U75A 4IU6A 1BN5A 4U6JA 1YJ3A 2OAZA 3Q6DA 3CB5A 4S00A 1YW8A 4PV4A 3S6BA 1B59A 4U73A 5JFRA 2BB7A 2ADUA 1A16A 1XGMA 2B3LA 5CDLA 1WBQA 1KQ0A 2BH3A 4ZWUA 4RZYA 1QZYA 2GZ5A 5CDVA 2V6CA 3MX6A 1QXZA 2BHCA 1XGOA 2GGCA 3OOOA 3PN9A 4PNCA 4U6EA 1QXWA 1C22A 4IECA 1YVMA 1C24A 3PKBA 2Q93A 5CNXA 1XNZA 2BWWA 1KP0A 2GG9A 3FM3A 3D27A 4ZNGA 5D6FA 1KQ9A 3BIPA 3QOCA 5JHUA 1M35A 1CHMA 1PV9A 2GG0A 2EVOA 5E2CA 4U69A 4U76A 4U71A 4IDYA 2GG5A 2BHBA 2B3HA 3PKAA 3O5VA 3CTZA 2GU6A 2BWSA 4RZZA 4IPAA 4QR8A 2BHDA 2BWYA 1N51A 2G6PA 4Z7MA 3CB6A 3MATA 4FLIA 4FO8A 2GGBA 2GG3A 2GG2A 2P98A 3OVKA 3IL0A 4FLLA 2P99A 1YW7A 2Q96A 4IKUA 1XGSA 2P9AA 2Q92A 2B3KA 2GU5A 4ZWOA 4U6ZA 1WY2A 1WL6A 4RGZ1 4KM3A 4HXXA 4U70A 1C23A 4FKCA 3L24A 4ZWPA 2Q95A 2Q94A 3RORA 1B6AA 4A6VA 2GU4A 3PKEA 1MATA 1WKMA 4S2RP 4U6CA 3I7MA 5E5BA 3BIQA 3RVAA 2EA2A 2NQ6A 3FMRA 1W2MA 2BN7A 2Q8KA 2BWXA 1WLRA 4S2TP 5FCHA 4R60A 4EGEA 5CIKA 4IF7A 4FLKA 2GTXA 3IU9A 5D6EA 3IU7A 3IG4A 3MR1A 4A6WA 1R5HA 5JI6A 2GG8A 4OOKA 1R58A 1C27A 5CDEA 2BWTA 3PKDA 2V3YA 1O0XA 2BHAA 3IU8A 1QXYA 3TAVA 1YW9A 4IKTA 1R5GA 4IKSA 4FUKA 4IKRA 5CLSA 4JUQA 5CE6A 5FCFA 2V3ZA 2BWVA 4FLJA 2OKNA 3BITA 1BOAA 2ZSGA 2BWUA 2NQ7A 1W7VA 2GA2A 1Y1NA 1JAWA 3PEBA 2GG7A 2GU7A 3TB5A 1WN1A 2EVCA 4U1BA 3L7GA 3PKCA 4B28A 1C21A 2EVMA 4MATA 1XGNA 3FMQA 4S01A 2EA4A 2IW2A 4FO7A 4U6WA 1WL9A
chains in the Genus database with same CATH superfamily
2V3XA 2MATA 2DFIA 2HOWA 4U75A 4IU6A 1BN5A 4U6JA 1YJ3A 2OAZA 3Q6DA 3CB5A 4S00A 1YW8A 4PV4A 3S6BA 1B59A 4U73A 5JFRA 2BB7A 2ADUA 1A16A 1XGMA 2B3LA 5CDLA 1WBQA 1KQ0A 2BH3A 4ZWUA 4RZYA 1QZYA 2GZ5A 5CDVA 2V6CA 3MX6A 1QXZA 2BHCA 1XGOA 2GGCA 3OOOA 3PN9A 4PNCA 4U6EA 1QXWA 1C22A 4IECA 1YVMA 1C24A 3PKBA 2Q93A 5CNXA 1XNZA 2BWWA 1KP0A 2GG9A 3FM3A 3D27A 4ZNGA 5D6FA 1KQ9A 3BIPA 3QOCA 5JHUA 1M35A 1CHMA 1PV9A 2GG0A 2EVOA 5E2CA 4U69A 4U76A 4U71A 4IDYA 2GG5A 2BHBA 2B3HA 3PKAA 3O5VA 3CTZA 2GU6A 2BWSA 4RZZA 4IPAA 4QR8A 2BHDA 2BWYA 1N51A 2G6PA 4Z7MA 3CB6A 3MATA 4FLIA 4FO8A 2GGBA 2GG3A 2GG2A 2P98A 3OVKA 3IL0A 4FLLA 2P99A 1YW7A 2Q96A 4IKUA 1XGSA 2P9AA 2Q92A 2B3KA 2GU5A 4ZWOA 4U6ZA 1WY2A 1WL6A 4RGZ1 4KM3A 4HXXA 4U70A 1C23A 4FKCA 3L24A 4ZWPA 2Q95A 2Q94A 3RORA 1B6AA 4A6VA 2GU4A 3PKEA 1MATA 1WKMA 4S2RP 4U6CA 3I7MA 5E5BA 3BIQA 3RVAA 2EA2A 2NQ6A 3FMRA 1W2MA 2BN7A 2Q8KA 2BWXA 1WLRA 4S2TP 5FCHA 4R60A 4EGEA 5CIKA 4IF7A 4FLKA 2GTXA 3IU9A 5D6EA 3IU7A 3IG4A 3MR1A 4A6WA 1R5HA 5JI6A 2GG8A 4OOKA 1R58A 1C27A 5CDEA 2BWTA 3PKDA 2V3YA 1O0XA 2BHAA 3IU8A 1QXYA 3TAVA 1YW9A 4IKTA 1R5GA 4IKSA 4FUKA 4IKRA 5CLSA 4JUQA 5CE6A 5FCFA 2V3ZA 2BWVA 4FLJA 2OKNA 3BITA 1BOAA 2ZSGA 2BWUA 2NQ7A 1W7VA 2GA2A 1Y1NA 1JAWA 3PEBA 2GG7A 2GU7A 3TB5A 1WN1A 2EVCA 4U1BA 3L7GA 3PKCA 4B28A 1C21A 2EVMA 4MATA 1XGNA 3FMQA 4S01A 2EA4A 2IW2A 4FO7A 4U6WA 1WL9A
chains in the Genus database with same CATH topology
2V3XA 2MATA 2DFIA 2HOWA 4U75A 4IU6A 1BN5A 4U6JA 1YJ3A 2OAZA 3Q6DA 3CB5A 4S00A 1YW8A 4PV4A 3S6BA 1B59A 4U73A 5JFRA 2BB7A 2ADUA 1A16A 1XGMA 2B3LA 5CDLA 1WBQA 1KQ0A 2BH3A 4ZWUA 4RZYA 1QZYA 2GZ5A 5CDVA 2V6CA 3MX6A 1QXZA 2BHCA 1XGOA 2GGCA 3OOOA 3PN9A 4PNCA 4U6EA 1QXWA 1C22A 4IECA 1YVMA 1C24A 3PKBA 2Q93A 5CNXA 1XNZA 2BWWA 1KP0A 2GG9A 3FM3A 3D27A 4ZNGA 5D6FA 1KQ9A 3BIPA 3QOCA 5JHUA 1M35A 1CHMA 1PV9A 2GG0A 2EVOA 5E2CA 4U69A 4U76A 4U71A 4IDYA 2GG5A 2BHBA 2B3HA 3PKAA 3O5VA 3CTZA 2GU6A 2BWSA 4RZZA 4IPAA 4QR8A 2BHDA 2BWYA 1N51A 2G6PA 4Z7MA 3CB6A 3MATA 4FLIA 4FO8A 2GGBA 2GG3A 2GG2A 2P98A 3OVKA 3IL0A 4FLLA 2P99A 1YW7A 2Q96A 4IKUA 1XGSA 2P9AA 2Q92A 2B3KA 2GU5A 4ZWOA 4U6ZA 1WY2A 1WL6A 4RGZ1 4KM3A 4HXXA 4U70A 1C23A 4FKCA 3L24A 4ZWPA 2Q95A 2Q94A 3RORA 1B6AA 4A6VA 2GU4A 3PKEA 1MATA 1WKMA 4S2RP 4U6CA 3I7MA 5E5BA 3BIQA 3RVAA 2EA2A 2NQ6A 3FMRA 1W2MA 2BN7A 2Q8KA 2BWXA 1WLRA 4S2TP 5FCHA 4R60A 4EGEA 5CIKA 4IF7A 4FLKA 2GTXA 3IU9A 5D6EA 3IU7A 3IG4A 3MR1A 4A6WA 1R5HA 5JI6A 2GG8A 4OOKA 1R58A 1C27A 5CDEA 2BWTA 3PKDA 2V3YA 1O0XA 2BHAA 3IU8A 1QXYA 3TAVA 1YW9A 4IKTA 1R5GA 4IKSA 4FUKA 4IKRA 5CLSA 4JUQA 5CE6A 5FCFA 2V3ZA 2BWVA 4FLJA 2OKNA 3BITA 1BOAA 2ZSGA 2BWUA 2NQ7A 1W7VA 2GA2A 1Y1NA 1JAWA 3PEBA 2GG7A 2GU7A 3TB5A 1WN1A 2EVCA 4U1BA 3L7GA 3PKCA 4B28A 1C21A 2EVMA 4MATA 1XGNA 3FMQA 4S01A 2EA4A 2IW2A 4FO7A 4U6WA 1WL9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2V3X A;  2MAT A;  2DFI A;  2HOW A;  4U75 A;  4IU6 A;  1BN5 A;  4U6J A;  1YJ3 A;  2OAZ A;  3Q6D A;  3CB5 A;  4S00 A;  1YW8 A;  4PV4 A;  3S6B A;  1B59 A;  4U73 A;  5JFR A;  2BB7 A;  2ADU A;  1A16 A;  1XGM A;  2B3L A;  5CDL A;  1WBQ A;  1KQ0 A;  2BH3 A;  4ZWU A;  4RZY A;  1QZY A;  2GZ5 A;  5CDV A;  2V6C A;  3MX6 A;  1QXZ A;  2BHC A;  1XGO A;  2GGC A;  3OOO A;  3PN9 A;  4PNC A;  4U6E A;  1QXW A;  1C22 A;  4IEC A;  1YVM A;  1C24 A;  3PKB A;  2Q93 A;  5CNX A;  1XNZ A;  2BWW A;  1KP0 A;  2GG9 A;  3FM3 A;  3D27 A;  4ZNG A;  5D6F A;  1KQ9 A;  3BIP A;  3QOC A;  5JHU A;  1M35 A;  1CHM A;  1PV9 A;  2GG0 A;  2EVO A;  5E2C A;  4U69 A;  4U76 A;  4U71 A;  4IDY A;  2GG5 A;  2BHB A;  2B3H A;  3PKA A;  3O5V A;  3CTZ A;  2GU6 A;  2BWS A;  4RZZ A;  4IPA A;  4QR8 A;  2BHD A;  2BWY A;  1N51 A;  2G6P A;  4Z7M A;  3CB6 A;  3MAT A;  4FLI A;  4FO8 A;  2GGB A;  2GG3 A;  2GG2 A;  2P98 A;  3OVK A;  3IL0 A;  4FLL A;  2P99 A;  1YW7 A;  2Q96 A;  4IKU A;  1XGS A;  2P9A A;  2Q92 A;  2B3K A;  2GU5 A;  4ZWO A;  4U6Z A;  1WY2 A;  1WL6 A;  4RGZ 1;  4KM3 A;  4HXX A;  4U70 A;  1C23 A;  4FKC A;  3L24 A;  4ZWP A;  2Q95 A;  2Q94 A;  3ROR A;  1B6A A;  4A6V A;  2GU4 A;  3PKE A;  1MAT A;  1WKM A;  4S2R P;  4U6C A;  3I7M A;  5E5B A;  3BIQ A;  3RVA A;  2EA2 A;  2NQ6 A;  3FMR A;  1W2M A;  2BN7 A;  2Q8K A;  2BWX A;  1WLR A;  4S2T P;  5FCH A;  4R60 A;  4EGE A;  5CIK A;  4IF7 A;  4FLK A;  2GTX A;  3IU9 A;  5D6E A;  3IU7 A;  3IG4 A;  3MR1 A;  4A6W A;  1R5H A;  5JI6 A;  2GG8 A;  4OOK A;  1R58 A;  1C27 A;  5CDE A;  2BWT A;  3PKD A;  2V3Y A;  1O0X A;  2BHA A;  3IU8 A;  1QXY A;  3TAV A;  1YW9 A;  4IKT A;  1R5G A;  4IKS A;  4FUK A;  4IKR A;  5CLS A;  4JUQ A;  5CE6 A;  5FCF A;  2V3Z A;  2BWV A;  4FLJ A;  2OKN A;  3BIT A;  1BOA A;  2ZSG A;  2BWU A;  2NQ7 A;  1W7V A;  2GA2 A;  1Y1N A;  1JAW A;  3PEB A;  2GG7 A;  2GU7 A;  3TB5 A;  1WN1 A;  2EVC A;  4U1B A;  3L7G A;  3PKC A;  4B28 A;  1C21 A;  2EVM A;  4MAT A;  1XGN A;  3FMQ A;  4S01 A;  2EA4 A;  2IW2 A;  4FO7 A;  4U6W A;  1WL9 A; 
#chains in the Genus database with same CATH topology
 2V3X A;  2MAT A;  2DFI A;  2HOW A;  4U75 A;  4IU6 A;  1BN5 A;  4U6J A;  1YJ3 A;  2OAZ A;  3Q6D A;  3CB5 A;  4S00 A;  1YW8 A;  4PV4 A;  3S6B A;  1B59 A;  4U73 A;  5JFR A;  2BB7 A;  2ADU A;  1A16 A;  1XGM A;  2B3L A;  5CDL A;  1WBQ A;  1KQ0 A;  2BH3 A;  4ZWU A;  4RZY A;  1QZY A;  2GZ5 A;  5CDV A;  2V6C A;  3MX6 A;  1QXZ A;  2BHC A;  1XGO A;  2GGC A;  3OOO A;  3PN9 A;  4PNC A;  4U6E A;  1QXW A;  1C22 A;  4IEC A;  1YVM A;  1C24 A;  3PKB A;  2Q93 A;  5CNX A;  1XNZ A;  2BWW A;  1KP0 A;  2GG9 A;  3FM3 A;  3D27 A;  4ZNG A;  5D6F A;  1KQ9 A;  3BIP A;  3QOC A;  5JHU A;  1M35 A;  1CHM A;  1PV9 A;  2GG0 A;  2EVO A;  5E2C A;  4U69 A;  4U76 A;  4U71 A;  4IDY A;  2GG5 A;  2BHB A;  2B3H A;  3PKA A;  3O5V A;  3CTZ A;  2GU6 A;  2BWS A;  4RZZ A;  4IPA A;  4QR8 A;  2BHD A;  2BWY A;  1N51 A;  2G6P A;  4Z7M A;  3CB6 A;  3MAT A;  4FLI A;  4FO8 A;  2GGB A;  2GG3 A;  2GG2 A;  2P98 A;  3OVK A;  3IL0 A;  4FLL A;  2P99 A;  1YW7 A;  2Q96 A;  4IKU A;  1XGS A;  2P9A A;  2Q92 A;  2B3K A;  2GU5 A;  4ZWO A;  4U6Z A;  1WY2 A;  1WL6 A;  4RGZ 1;  4KM3 A;  4HXX A;  4U70 A;  1C23 A;  4FKC A;  3L24 A;  4ZWP A;  2Q95 A;  2Q94 A;  3ROR A;  1B6A A;  4A6V A;  2GU4 A;  3PKE A;  1MAT A;  1WKM A;  4S2R P;  4U6C A;  3I7M A;  5E5B A;  3BIQ A;  3RVA A;  2EA2 A;  2NQ6 A;  3FMR A;  1W2M A;  2BN7 A;  2Q8K A;  2BWX A;  1WLR A;  4S2T P;  5FCH A;  4R60 A;  4EGE A;  5CIK A;  4IF7 A;  4FLK A;  2GTX A;  3IU9 A;  5D6E A;  3IU7 A;  3IG4 A;  3MR1 A;  4A6W A;  1R5H A;  5JI6 A;  2GG8 A;  4OOK A;  1R58 A;  1C27 A;  5CDE A;  2BWT A;  3PKD A;  2V3Y A;  1O0X A;  2BHA A;  3IU8 A;  1QXY A;  3TAV A;  1YW9 A;  4IKT A;  1R5G A;  4IKS A;  4FUK A;  4IKR A;  5CLS A;  4JUQ A;  5CE6 A;  5FCF A;  2V3Z A;  2BWV A;  4FLJ A;  2OKN A;  3BIT A;  1BOA A;  2ZSG A;  2BWU A;  2NQ7 A;  1W7V A;  2GA2 A;  1Y1N A;  1JAW A;  3PEB A;  2GG7 A;  2GU7 A;  3TB5 A;  1WN1 A;  2EVC A;  4U1B A;  3L7G A;  3PKC A;  4B28 A;  1C21 A;  2EVM A;  4MAT A;  1XGN A;  3FMQ A;  4S01 A;  2EA4 A;  2IW2 A;  4FO7 A;  4U6W A;  1WL9 A; 
#chains in the Genus database with same CATH homology
 2V3X A;  2MAT A;  2DFI A;  2HOW A;  4U75 A;  4IU6 A;  1BN5 A;  4U6J A;  1YJ3 A;  2OAZ A;  3Q6D A;  3CB5 A;  4S00 A;  1YW8 A;  4PV4 A;  3S6B A;  1B59 A;  4U73 A;  5JFR A;  2BB7 A;  2ADU A;  1A16 A;  1XGM A;  2B3L A;  5CDL A;  1WBQ A;  1KQ0 A;  2BH3 A;  4ZWU A;  4RZY A;  1QZY A;  2GZ5 A;  5CDV A;  2V6C A;  3MX6 A;  1QXZ A;  2BHC A;  1XGO A;  2GGC A;  3OOO A;  3PN9 A;  4PNC A;  4U6E A;  1QXW A;  1C22 A;  4IEC A;  1YVM A;  1C24 A;  3PKB A;  2Q93 A;  5CNX A;  1XNZ A;  2BWW A;  1KP0 A;  2GG9 A;  3FM3 A;  3D27 A;  4ZNG A;  5D6F A;  1KQ9 A;  3BIP A;  3QOC A;  5JHU A;  1M35 A;  1CHM A;  1PV9 A;  2GG0 A;  2EVO A;  5E2C A;  4U69 A;  4U76 A;  4U71 A;  4IDY A;  2GG5 A;  2BHB A;  2B3H A;  3PKA A;  3O5V A;  3CTZ A;  2GU6 A;  2BWS A;  4RZZ A;  4IPA A;  4QR8 A;  2BHD A;  2BWY A;  1N51 A;  2G6P A;  4Z7M A;  3CB6 A;  3MAT A;  4FLI A;  4FO8 A;  2GGB A;  2GG3 A;  2GG2 A;  2P98 A;  3OVK A;  3IL0 A;  4FLL A;  2P99 A;  1YW7 A;  2Q96 A;  4IKU A;  1XGS A;  2P9A A;  2Q92 A;  2B3K A;  2GU5 A;  4ZWO A;  4U6Z A;  1WY2 A;  1WL6 A;  4RGZ 1;  4KM3 A;  4HXX A;  4U70 A;  1C23 A;  4FKC A;  3L24 A;  4ZWP A;  2Q95 A;  2Q94 A;  3ROR A;  1B6A A;  4A6V A;  2GU4 A;  3PKE A;  1MAT A;  1WKM A;  4S2R P;  4U6C A;  3I7M A;  5E5B A;  3BIQ A;  3RVA A;  2EA2 A;  2NQ6 A;  3FMR A;  1W2M A;  2BN7 A;  2Q8K A;  2BWX A;  1WLR A;  4S2T P;  5FCH A;  4R60 A;  4EGE A;  5CIK A;  4IF7 A;  4FLK A;  2GTX A;  3IU9 A;  5D6E A;  3IU7 A;  3IG4 A;  3MR1 A;  4A6W A;  1R5H A;  5JI6 A;  2GG8 A;  4OOK A;  1R58 A;  1C27 A;  5CDE A;  2BWT A;  3PKD A;  2V3Y A;  1O0X A;  2BHA A;  3IU8 A;  1QXY A;  3TAV A;  1YW9 A;  4IKT A;  1R5G A;  4IKS A;  4FUK A;  4IKR A;  5CLS A;  4JUQ A;  5CE6 A;  5FCF A;  2V3Z A;  2BWV A;  4FLJ A;  2OKN A;  3BIT A;  1BOA A;  2ZSG A;  2BWU A;  2NQ7 A;  1W7V A;  2GA2 A;  1Y1N A;  1JAW A;  3PEB A;  2GG7 A;  2GU7 A;  3TB5 A;  1WN1 A;  2EVC A;  4U1B A;  3L7G A;  3PKC A;  4B28 A;  1C21 A;  2EVM A;  4MAT A;  1XGN A;  3FMQ A;  4S01 A;  2EA4 A;  2IW2 A;  4FO7 A;  4U6W A;  1WL9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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