3SGBI

Structure of the complex of streptomyces griseus protease b and the third domain of the turkey ovomucoid inhibitor at 1.8 angstroms resolution
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
50
structure length
50
Chain Sequence
DCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure of the complex of Streptomyces griseus protease B and the third domain of the turkey ovomucoid inhibitor at 1.8-A resolution.
pubmed doi rcsb
molecule keywords PROTEINASE B (SGPB)
molecule tags Complex(serine proteinase-inhibitor)
source organism Streptomyces griseus
total genus 12
structure length 50
sequence length 50
ec nomenclature
pdb deposition date 1983-01-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 3sgbI00
2LEOA 1SGQI 1YTPA 2NU1I 2GKVA 1CE3A 2N71A 1TIHA 1OMTA 2JYYA 2GKRI 1HDLA 1CGII 1SGNI 2M5XA 1FYBA 2V53A 1UVGA 2KMQA 1OMUA 2P6AC 2QQDA 2NU2I 4GI3C 1BUSA 1AN1I 1IY6A 5JHWC 1SGYI 1SGDI 3TJQA 2XRCA 1CGJI 1Y1BA 1IW4A 1UUCA 2NU0I 1NUBA 1H0ZA 1KMAA 1CHOI 4SGBI 1TBQR 4HGUA 1LR9A 1CT0I 1PJUA 1OYVI 2SGDI 1DS3I 2KMOA 1CT2I 1LR7A 3OVOA 3SGQI 4OVOA 2F3CI 1M8BA 1MT1A 1YU6C 2BUSA 2KMRA 3B4VC 1TBRR 1TGSI 2SGPI 2SGQI 1DS2I 1PCEA 2ARPF 1LR8A 2KMPA 2GKTI 1M8CA 5DAEA 2SGFI 2WCYA 1IY5A 1R0RI 3SGBI 2OVOA 2N17A 1N13A 2SGEI 1Y1CA 1HPTA 2JXDA 2NU4I 2KCXA 1PPFI 2B0UC 3SEKC 3QTLD 1TUSA 1TURA 2ERWA 1SGRI 1Z7KB 2QQCA 1CT4I 1UVFA 1SGEI 2JZMA 2N52A 3HH2C 1BMOA 1HJAI 1SGPI 1CSOI 2NU3I 1OVOA
chains in the Genus database with same CATH superfamily
2GVIA 3BJIA 4WP4A 2LEOA 1SGQI 3UGDA 1YTPA 2A20A 2NU1I 2X52A 1TBNA 2GKVA 2UZ3A 1CE3A 2L7XA 3R5CA 2N71A 2PQ8A 1TIHA 2QQEA 3TOBA 5J8FA 2X3TA 1OMTA 2OZUA 2JYYA 2GKRI 1FY7A 2ENNA 5CCLA 1HDLA 2V1CC 3OXFA 3TOAA 1CGII 1P9ZA 3OXGA 2ELIA 1WTJA 3E2IA 2YQPA 4MPIA 1SGNI 2M5XA 2DIPA 1FYBA 2V53A 1UVGA 2QPOA 5FUVA 4FKDA 5E3RA 2KMQA 2LB7A 1OMUA 2P6AC 2RIJA 2QQDA 3UEJA 2NU2I 4GI3C 5CCMA 3R5DA 1AN1I 2ROWA 3TO7A 3TO6A 4A24A 1BUSA 1PTRA 1IY6A 5JHWC 1SGYI 1SGDI 3TJQA 3FC3A 2XRCA 1CGJI 2B8TA 3FSXA 3D00A 2DKVA 2ORWA 1V1HA 1Y1BA 1IW4A 1UUCA 2J9RA 1K7UA 3QAHA 2Y0MA 2NU0I 1NUBA 1H0ZA 4B6DA 2J87A 1XBTA 3UGIA 1XA6A 1KMAA 5J8CA 4UXHA 1CHOI 3VDUA 1KBEA 4E1PA 1WKXA 2LUYA 3R5AA 2DB6A 5EX3A 4SGBI 1TBQR 4HGUA 4DNCA 1LR9A 3VE5A 1CT0I 1PJUA 1OYVI 5HI7A 3E59A 4E1RA 4UXIA 1W4RA 2CJSC 2SGDI 1DS3I 1Z2IA 1V1IA 2OU2A 2KMOA 1CT2I 1LR7A 3MEKA 3OVOA 3SGQI 9WGAA 4OVOA 1ULKA 2N1AB 2ENZA 2JA1A 1ULNA 2F3CI 1M8BA 1MT1A 1YU6C 7WGAA 2BUSA 1X4SA 2CWGA 2KMRA 3B4VC 1FAQA 3CXLA 1TBRR 1TGSI 2SGPI 1MJ9A 2L8EA 1MJAA 2SGQI 1DS2I 1NXUA 3RU0A 1WGTA 1PCEA 2ARPF 1LR8A 1Y8FA 2ODDA 2KMPA 2GKTI 1M8CA 1X74A 2E73A 5DAEA 4L9MA 1S20A 1FARA 4AMLA 3OL0A 1PTQA 1KBFA 2SGFI 2WCYA 1XX6A 5FUYA 1IY5A 3TO9A 2W0TA 3UGLA 1R0RI 2WVJA 2VRWB 1MJBA 2CWHA 1HEVA 2YUUA 1R79A 1P9GA 3SGBI 5FUWA 2OVOA 2N17A 3UEYA 1K7TA 2CWFA 3QWPA 1N13A 1TOTA 2SGEI 1Y1CA 1HPTA 3FSYA 3OXLA 2JXDA 2NU4I 3R5BA 2K9HA 1TBOA 2KCXA 2OD1A 5FUXA 1PPFI 2QQ0A 2B0UC 3PDNA 2GIVA 3VDPA 3SEKC 3QTLD 2WGCA 1K7VA 2V1CA 3UFFA 1ULMA 4UXJA 1TUSA 1TURA 2ERWA 1SGRI 1Z7KB 2QQCA 1UHAA 2E5RA 3KY9A 5HQ8A 1CT4I 1WGCA 2UVOA 5E3QA 1UVFA 2ORVA 1SGEI 2JZMA 1Q9BA 1RFHA 1W3SA 2N52A 3UOEA 2JW6A 3GOXA 5EX0A 1U5KA 3HH2C 1BMOA 5E3PA 1HJAI 1SGPI 1CSOI 1VDDA 2FNFX 2RC4A 4JCVE 2NU3I 1OVOA
chains in the Genus database with same CATH topology
2GVIA 3BJIA 2LEOA 1SGQI 3UGDA 1YTPA 2A20A 2NU1I 1TBNA 2GKVA 2UZ3A 1CE3A 2L7XA 2N71A 1TIHA 2QQEA 1OMTA 2JYYA 2GKRI 2ENNA 5CCLA 1HDLA 2V1CC 3OXFA 1CGII 3OXGA 2ELIA 3E2IA 2YQPA 1SGNI 2M5XA 2DIPA 1FYBA 2V53A 1UVGA 2QPOA 5FUVA 4FKDA 2KMQA 1OMUA 2P6AC 2QQDA 3UEJA 2NU2I 4GI3C 5CCMA 1BUSA 1AN1I 2ROWA 4A24A 1IY6A 1PTRA 5JHWC 1SGYI 1SGDI 3TJQA 3FC3A 2XRCA 1CGJI 2B8TA 3D00A 2ORWA 1V1HA 1Y1BA 1IW4A 1UUCA 2J9RA 2NU0I 1NUBA 1H0ZA 4B6DA 2J87A 1XBTA 3UGIA 1XA6A 1KMAA 4UXHA 1CHOI 3VDUA 1KBEA 4E1PA 2LUYA 2DB6A 5EX3A 4SGBI 1TBQR 4HGUA 1LR9A 3VE5A 1CT0I 1PJUA 1OYVI 5HI7A 3E59A 4E1RA 4UXIA 1W4RA 2CJSC 2SGDI 1DS3I 1V1IA 2KMOA 1CT2I 1LR7A 3MEKA 3OVOA 3SGQI 4OVOA 2N1AB 2ENZA 2JA1A 2F3CI 1M8BA 1MT1A 1YU6C 2BUSA 1X4SA 2KMRA 3B4VC 1FAQA 3CXLA 1TBRR 1TGSI 2SGPI 2L8EA 2SGQI 1DS2I 3RU0A 1PCEA 2ARPF 1LR8A 1Y8FA 2ODDA 2KMPA 2GKTI 1M8CA 1X74A 2E73A 5DAEA 4L9MA 1FARA 3OL0A 1PTQA 1KBFA 2SGFI 2WCYA 1XX6A 5FUYA 1IY5A 2W0TA 3UGLA 1R0RI 2WVJA 2VRWB 2YUUA 1R79A 3SGBI 5FUWA 2OVOA 2N17A 3UEYA 3QWPA 1N13A 1TOTA 2SGEI 1Y1CA 1HPTA 3OXLA 2JXDA 2NU4I 2K9HA 1TBOA 2KCXA 2OD1A 5FUXA 1PPFI 2QQ0A 2B0UC 3PDNA 3VDPA 3SEKC 3QTLD 2V1CA 3UFFA 4UXJA 1TUSA 1TURA 2ERWA 1SGRI 1Z7KB 2QQCA 3KY9A 2E5RA 5HQ8A 1CT4I 1UVFA 2ORVA 1SGEI 2JZMA 1W3SA 1RFHA 2N52A 2JW6A 3GOXA 5EX0A 1U5KA 3HH2C 1BMOA 1HJAI 1SGPI 1CSOI 1VDDA 2FNFX 4JCVE 2NU3I 1OVOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2LEO A;  1SGQ I;  1YTP A;  2NU1 I;  2GKV A;  1CE3 A;  2N71 A;  1TIH A;  1OMT A;  2JYY A;  2GKR I;  1HDL A;  1CGI I;  1SGN I;  2M5X A;  1FYB A;  2V53 A;  1UVG A;  2KMQ A;  1OMU A;  2P6A C;  2QQD A;  2NU2 I;  4GI3 C;  1BUS A;  1AN1 I;  1IY6 A;  5JHW C;  1SGY I;  1SGD I;  3TJQ A;  2XRC A;  1CGJ I;  1Y1B A;  1IW4 A;  1UUC A;  2NU0 I;  1NUB A;  1H0Z A;  1KMA A;  1CHO I;  4SGB I;  1TBQ R;  4HGU A;  1LR9 A;  1CT0 I;  1PJU A;  1OYV I;  2SGD I;  1DS3 I;  2KMO A;  1CT2 I;  1LR7 A;  3OVO A;  3SGQ I;  4OVO A;  2F3C I;  1M8B A;  1MT1 A;  1YU6 C;  2BUS A;  2KMR A;  3B4V C;  1TBR R;  1TGS I;  2SGP I;  2SGQ I;  1DS2 I;  1PCE A;  2ARP F;  1LR8 A;  2KMP A;  2GKT I;  1M8C A;  5DAE A;  2SGF I;  2WCY A;  1IY5 A;  1R0R I;  3SGB I;  2OVO A;  2N17 A;  1N13 A;  2SGE I;  1Y1C A;  1HPT A;  2JXD A;  2NU4 I;  2KCX A;  1PPF I;  2B0U C;  3SEK C;  3QTL D;  1TUS A;  1TUR A;  2ERW A;  1SGR I;  1Z7K B;  2QQC A;  1CT4 I;  1UVF A;  1SGE I;  2JZM A;  2N52 A;  3HH2 C;  1BMO A;  1HJA I;  1SGP I;  1CSO I;  2NU3 I;  1OVO A; 
#chains in the Genus database with same CATH topology
 2GVI A;  3BJI A;  4WP4 A;  2LEO A;  1SGQ I;  3UGD A;  1YTP A;  2A20 A;  2NU1 I;  2X52 A;  1TBN A;  2GKV A;  2UZ3 A;  1CE3 A;  2L7X A;  3R5C A;  2N71 A;  2PQ8 A;  1TIH A;  2QQE A;  3TOB A;  5J8F A;  2X3T A;  1OMT A;  2OZU A;  2JYY A;  2GKR I;  1FY7 A;  2ENN A;  5CCL A;  1HDL A;  2V1C C;  3OXF A;  3TOA A;  1CGI I;  1P9Z A;  3OXG A;  2ELI A;  1WTJ A;  3E2I A;  2YQP A;  4MPI A;  1SGN I;  2M5X A;  2DIP A;  1FYB A;  2V53 A;  1UVG A;  2QPO A;  5FUV A;  4FKD A;  5E3R A;  2KMQ A;  2LB7 A;  1OMU A;  2P6A C;  2RIJ A;  2QQD A;  3UEJ A;  2NU2 I;  4GI3 C;  5CCM A;  3R5D A;  1AN1 I;  2ROW A;  3TO7 A;  3TO6 A;  4A24 A;  1BUS A;  1PTR A;  1IY6 A;  5JHW C;  1SGY I;  1SGD I;  3TJQ A;  3FC3 A;  2XRC A;  1CGJ I;  2B8T A;  3FSX A;  3D00 A;  2DKV A;  2ORW A;  1V1H A;  1Y1B A;  1IW4 A;  1UUC A;  2J9R A;  1K7U A;  3QAH A;  2Y0M A;  2NU0 I;  1NUB A;  1H0Z A;  4B6D A;  2J87 A;  1XBT A;  3UGI A;  1XA6 A;  1KMA A;  5J8C A;  4UXH A;  1CHO I;  3VDU A;  1KBE A;  4E1P A;  1WKX A;  2LUY A;  3R5A A;  2DB6 A;  5EX3 A;  4SGB I;  1TBQ R;  4HGU A;  4DNC A;  1LR9 A;  3VE5 A;  1CT0 I;  1PJU A;  1OYV I;  5HI7 A;  3E59 A;  4E1R A;  4UXI A;  1W4R A;  2CJS C;  2SGD I;  1DS3 I;  1Z2I A;  1V1I A;  2OU2 A;  2KMO A;  1CT2 I;  1LR7 A;  3MEK A;  3OVO A;  3SGQ I;  9WGA A;  4OVO A;  1ULK A;  2N1A B;  2ENZ A;  2JA1 A;  1ULN A;  2F3C I;  1M8B A;  1MT1 A;  1YU6 C;  7WGA A;  2BUS A;  1X4S A;  2CWG A;  2KMR A;  3B4V C;  1FAQ A;  3CXL A;  1TBR R;  1TGS I;  2SGP I;  1MJ9 A;  2L8E A;  1MJA A;  2SGQ I;  1DS2 I;  1NXU A;  3RU0 A;  1WGT A;  1PCE A;  2ARP F;  1LR8 A;  1Y8F A;  2ODD A;  2KMP A;  2GKT I;  1M8C A;  1X74 A;  2E73 A;  5DAE A;  4L9M A;  1S20 A;  1FAR A;  4AML A;  3OL0 A;  1PTQ A;  1KBF A;  2SGF I;  2WCY A;  1XX6 A;  5FUY A;  1IY5 A;  3TO9 A;  2W0T A;  3UGL A;  1R0R I;  2WVJ A;  2VRW B;  1MJB A;  2CWH A;  1HEV A;  2YUU A;  1R79 A;  1P9G A;  3SGB I;  5FUW A;  2OVO A;  2N17 A;  3UEY A;  1K7T A;  2CWF A;  3QWP A;  1N13 A;  1TOT A;  2SGE I;  1Y1C A;  1HPT A;  3FSY A;  3OXL A;  2JXD A;  2NU4 I;  3R5B A;  2K9H A;  1TBO A;  2KCX A;  2OD1 A;  5FUX A;  1PPF I;  2QQ0 A;  2B0U C;  3PDN A;  2GIV A;  3VDP A;  3SEK C;  3QTL D;  2WGC A;  1K7V A;  2V1C A;  3UFF A;  1ULM A;  4UXJ A;  1TUS A;  1TUR A;  2ERW A;  1SGR I;  1Z7K B;  2QQC A;  1UHA A;  2E5R A;  3KY9 A;  5HQ8 A;  1CT4 I;  1WGC A;  2UVO A;  5E3Q A;  1UVF A;  2ORV A;  1SGE I;  2JZM A;  1Q9B A;  1RFH A;  1W3S A;  2N52 A;  3UOE A;  2JW6 A;  3GOX A;  5EX0 A;  1U5K A;  3HH2 C;  1BMO A;  5E3P A;  1HJA I;  1SGP I;  1CSO I;  1VDD A;  2FNF X;  2RC4 A;  4JCV E;  2NU3 I;  1OVO A; 
#chains in the Genus database with same CATH homology
 2GVI A;  3BJI A;  2LEO A;  1SGQ I;  3UGD A;  1YTP A;  2A20 A;  2NU1 I;  1TBN A;  2GKV A;  2UZ3 A;  1CE3 A;  2L7X A;  2N71 A;  1TIH A;  2QQE A;  1OMT A;  2JYY A;  2GKR I;  2ENN A;  5CCL A;  1HDL A;  2V1C C;  3OXF A;  1CGI I;  3OXG A;  2ELI A;  3E2I A;  2YQP A;  1SGN I;  2M5X A;  2DIP A;  1FYB A;  2V53 A;  1UVG A;  2QPO A;  5FUV A;  4FKD A;  2KMQ A;  1OMU A;  2P6A C;  2QQD A;  3UEJ A;  2NU2 I;  4GI3 C;  5CCM A;  1BUS A;  1AN1 I;  2ROW A;  4A24 A;  1IY6 A;  1PTR A;  5JHW C;  1SGY I;  1SGD I;  3TJQ A;  3FC3 A;  2XRC A;  1CGJ I;  2B8T A;  3D00 A;  2ORW A;  1V1H A;  1Y1B A;  1IW4 A;  1UUC A;  2J9R A;  2NU0 I;  1NUB A;  1H0Z A;  4B6D A;  2J87 A;  1XBT A;  3UGI A;  1XA6 A;  1KMA A;  4UXH A;  1CHO I;  3VDU A;  1KBE A;  4E1P A;  2LUY A;  2DB6 A;  5EX3 A;  4SGB I;  1TBQ R;  4HGU A;  1LR9 A;  3VE5 A;  1CT0 I;  1PJU A;  1OYV I;  5HI7 A;  3E59 A;  4E1R A;  4UXI A;  1W4R A;  2CJS C;  2SGD I;  1DS3 I;  1V1I A;  2KMO A;  1CT2 I;  1LR7 A;  3MEK A;  3OVO A;  3SGQ I;  4OVO A;  2N1A B;  2ENZ A;  2JA1 A;  2F3C I;  1M8B A;  1MT1 A;  1YU6 C;  2BUS A;  1X4S A;  2KMR A;  3B4V C;  1FAQ A;  3CXL A;  1TBR R;  1TGS I;  2SGP I;  2L8E A;  2SGQ I;  1DS2 I;  3RU0 A;  1PCE A;  2ARP F;  1LR8 A;  1Y8F A;  2ODD A;  2KMP A;  2GKT I;  1M8C A;  1X74 A;  2E73 A;  5DAE A;  4L9M A;  1FAR A;  3OL0 A;  1PTQ A;  1KBF A;  2SGF I;  2WCY A;  1XX6 A;  5FUY A;  1IY5 A;  2W0T A;  3UGL A;  1R0R I;  2WVJ A;  2VRW B;  2YUU A;  1R79 A;  3SGB I;  5FUW A;  2OVO A;  2N17 A;  3UEY A;  3QWP A;  1N13 A;  1TOT A;  2SGE I;  1Y1C A;  1HPT A;  3OXL A;  2JXD A;  2NU4 I;  2K9H A;  1TBO A;  2KCX A;  2OD1 A;  5FUX A;  1PPF I;  2QQ0 A;  2B0U C;  3PDN A;  3VDP A;  3SEK C;  3QTL D;  2V1C A;  3UFF A;  4UXJ A;  1TUS A;  1TUR A;  2ERW A;  1SGR I;  1Z7K B;  2QQC A;  3KY9 A;  2E5R A;  5HQ8 A;  1CT4 I;  1UVF A;  2ORV A;  1SGE I;  2JZM A;  1W3S A;  1RFH A;  2N52 A;  2JW6 A;  3GOX A;  5EX0 A;  1U5K A;  3HH2 C;  1BMO A;  1HJA I;  1SGP I;  1CSO I;  1VDD A;  2FNF X;  4JCV E;  2NU3 I;  1OVO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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