3TB5A

Crystal structure of the enterococcus faecalis methionine aminopeptidase apo form
Total Genus 87
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
87
sequence length
254
structure length
254
Chain Sequence
MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATCCSINDEICHGFPRKKVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYGVVRDFVGHGIGPTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGLSCQYEHSLAITKEGPRILTSQGEELTY
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Hydrolase
molecule keywords Methionine aminopeptidase
publication title Structural studies of Enterococcus faecalis methionine aminopeptidase and design of microbe specific 2,2'-bipyridine based inhibitors
doi rcsb
source organism Enterococcus faecalis
total genus 87
structure length 254
sequence length 254
chains with identical sequence B, C
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2011-08-05
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3tb5A00
2EVMA 3TB5A 3Q6DA 4Z7MA 3MR1A 1BOAA 2EVOA 4IKUA 1M35A 2BWWA 2V3ZA 2GU5A 2Q92A 2BB7A 4FUKA 2Q94A 3IU7A 2GGCA 4FO7A 5D6FA 4U6EA 3RORA 1WL9A 2BHAA 4B28A 2HOWA 2B3LA 2Q93A 1WKMA 2GA2A 4IKSA 1YW7A 2BWUA 1W7VA 2IW2A 2GG3A 4OOKA 1O0XA 4RGZ1 1Y1NA 1YW9A 3FMRA 1WLRA 5JFRA 4FLJA 1XGMA 4HXXA 2NQ6A 2B3KA 4U71A 4A6WA 1C23A 4S01A 5CDLA 2P9AA 3IU9A 2GG9A 4FKCA 2V3YA 1KQ9A 1XGSA 1WBQA 3BIPA 1XGNA 4FO8A 2BWTA 3IU8A 4A6VA 4ZWPA 3IG4A 1C27A 3CB5A 2BWXA 1YVMA 1XGOA 2EA2A 2GG7A 1R58A 4ZNGA 1MATA 2GG8A 3MX6A 5JI6A 5FCHA 1A16A 1WN1A 3BITA 3FMQA 1W2MA 4FLKA 2BH3A 3L24A 3PKEA 3PKAA 1PV9A 2GU6A 2G6PA 1R5HA 2GU7A 1N51A 4U1BA 1XNZA 2OKNA 3L7GA 1KQ0A 4IPAA 1YW8A 1B59A 2EVCA 4IKRA 5JHUA 1QXWA 4S2RP 5CLSA 2NQ7A 2EA4A 4U70A 4IDYA 2BHBA 4S2TP 4PNCA 4U6JA 1BN5A 2GTXA 5FCFA 4IU6A 1C22A 1JAWA 3BIQA 4FLIA 2GGBA 3CTZA 3D27A 4IF7A 3S6BA 3TAVA 5D6EA 3PKBA 1QZYA 1C21A 4U6CA 4FLLA 2BHDA 2GG2A 2OAZA 4IECA 2BWYA 1CHMA 2BN7A 2GG0A 4QR8A 3MATA 4U75A 1YJ3A 4U6WA 4MATA 4ZWUA 1KP0A 1WL6A 3PKCA 2GU4A 2BWVA 3CB6A 4RZZA 2B3HA 3FM3A 2P99A 4U73A 2V6CA 2BHCA 5CE6A 5CDEA 2V3XA 4KM3A 1QXZA 2Q95A 5CDVA 2ZSGA 4U69A 5CIKA 1R5GA 1WY2A 5CNXA 2P98A 5E5BA 4U6ZA 3PKDA 2GG5A 4R60A 4PV4A 2Q8KA 1QXYA 2MATA 3RVAA 4S00A 2GZ5A 4EGEA 2Q96A 2DFIA 4JUQA 1B6AA 1C24A 4IKTA 2ADUA 4ZWOA 2BWSA 4RZYA 4U76A
chains in the Genus database with same CATH superfamily
2EVMA 3TB5A 3Q6DA 4Z7MA 3MR1A 1BOAA 2EVOA 4IKUA 1M35A 2BWWA 2V3ZA 2GU5A 2Q92A 2BB7A 4FUKA 2Q94A 3IU7A 2GGCA 4FO7A 5D6FA 4U6EA 3RORA 1WL9A 2BHAA 4B28A 2HOWA 2B3LA 2Q93A 1WKMA 2GA2A 4IKSA 1YW7A 2BWUA 1W7VA 2IW2A 2GG3A 4OOKA 1O0XA 4RGZ1 1Y1NA 1YW9A 3FMRA 1WLRA 5JFRA 4FLJA 1XGMA 4HXXA 2NQ6A 2B3KA 4U71A 4A6WA 1C23A 4S01A 5CDLA 2P9AA 3IU9A 2GG9A 4FKCA 2V3YA 1KQ9A 1XGSA 1WBQA 3BIPA 1XGNA 4FO8A 2BWTA 3IU8A 4A6VA 4ZWPA 3IG4A 1C27A 3CB5A 2BWXA 1YVMA 1XGOA 2EA2A 2GG7A 1R58A 4ZNGA 1MATA 2GG8A 3MX6A 5JI6A 5FCHA 1A16A 1WN1A 3BITA 3FMQA 1W2MA 4FLKA 2BH3A 3L24A 3PKEA 3PKAA 1PV9A 2GU6A 2G6PA 1R5HA 2GU7A 1N51A 4U1BA 1XNZA 2OKNA 3L7GA 1KQ0A 4IPAA 1YW8A 1B59A 2EVCA 4IKRA 5JHUA 1QXWA 4S2RP 5CLSA 2NQ7A 2EA4A 4U70A 4IDYA 2BHBA 4S2TP 4PNCA 4U6JA 1BN5A 2GTXA 5FCFA 4IU6A 1C22A 1JAWA 3BIQA 4FLIA 2GGBA 3CTZA 3D27A 4IF7A 3S6BA 3TAVA 5D6EA 3PKBA 1QZYA 1C21A 4U6CA 4FLLA 2BHDA 2GG2A 2OAZA 4IECA 2BWYA 1CHMA 2BN7A 2GG0A 4QR8A 3MATA 4U75A 1YJ3A 4U6WA 4MATA 4ZWUA 1KP0A 1WL6A 3PKCA 2GU4A 2BWVA 3CB6A 4RZZA 2B3HA 3FM3A 2P99A 4U73A 2V6CA 2BHCA 5CE6A 5CDEA 2V3XA 4KM3A 1QXZA 2Q95A 5CDVA 2ZSGA 4U69A 5CIKA 1R5GA 1WY2A 5CNXA 2P98A 5E5BA 4U6ZA 3PKDA 2GG5A 4R60A 4PV4A 2Q8KA 1QXYA 2MATA 3RVAA 4S00A 2GZ5A 4EGEA 2Q96A 2DFIA 4JUQA 1B6AA 1C24A 4IKTA 2ADUA 4ZWOA 2BWSA 4RZYA 4U76A
chains in the Genus database with same CATH topology
2EVMA 3TB5A 3Q6DA 4Z7MA 3MR1A 1BOAA 2EVOA 4IKUA 1M35A 2BWWA 2V3ZA 2GU5A 2Q92A 2BB7A 4FUKA 2Q94A 3IU7A 2GGCA 4FO7A 5D6FA 4U6EA 3RORA 1WL9A 2BHAA 4B28A 2HOWA 2B3LA 2Q93A 1WKMA 2GA2A 4IKSA 1YW7A 2BWUA 1W7VA 2IW2A 2GG3A 4OOKA 1O0XA 4RGZ1 1Y1NA 1YW9A 3FMRA 1WLRA 5JFRA 4FLJA 1XGMA 4HXXA 2NQ6A 2B3KA 4U71A 4A6WA 1C23A 4S01A 5CDLA 2P9AA 3IU9A 2GG9A 4FKCA 2V3YA 1KQ9A 1XGSA 1WBQA 3BIPA 1XGNA 4FO8A 2BWTA 3IU8A 4A6VA 4ZWPA 3IG4A 1C27A 3CB5A 2BWXA 1YVMA 1XGOA 2EA2A 2GG7A 1R58A 4ZNGA 1MATA 2GG8A 3MX6A 5JI6A 5FCHA 1A16A 1WN1A 3BITA 3FMQA 1W2MA 4FLKA 2BH3A 3L24A 3PKEA 3PKAA 1PV9A 2GU6A 2G6PA 1R5HA 2GU7A 1N51A 4U1BA 1XNZA 2OKNA 3L7GA 1KQ0A 4IPAA 1YW8A 1B59A 2EVCA 4IKRA 5JHUA 1QXWA 4S2RP 5CLSA 2NQ7A 2EA4A 4U70A 4IDYA 2BHBA 4S2TP 4PNCA 4U6JA 1BN5A 2GTXA 5FCFA 4IU6A 1C22A 1JAWA 3BIQA 4FLIA 2GGBA 3CTZA 3D27A 4IF7A 3S6BA 3TAVA 5D6EA 3PKBA 1QZYA 1C21A 4U6CA 4FLLA 2BHDA 2GG2A 2OAZA 4IECA 2BWYA 1CHMA 2BN7A 2GG0A 4QR8A 3MATA 4U75A 1YJ3A 4U6WA 4MATA 4ZWUA 1KP0A 1WL6A 3PKCA 2GU4A 2BWVA 3CB6A 4RZZA 2B3HA 3FM3A 2P99A 4U73A 2V6CA 2BHCA 5CE6A 5CDEA 2V3XA 4KM3A 1QXZA 2Q95A 5CDVA 2ZSGA 4U69A 5CIKA 1R5GA 1WY2A 5CNXA 2P98A 5E5BA 4U6ZA 3PKDA 2GG5A 4R60A 4PV4A 2Q8KA 1QXYA 2MATA 3RVAA 4S00A 2GZ5A 4EGEA 2Q96A 2DFIA 4JUQA 1B6AA 1C24A 4IKTA 2ADUA 4ZWOA 2BWSA 4RZYA 4U76A
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2EVM A;  3TB5 A;  3Q6D A;  4Z7M A;  3MR1 A;  1BOA A;  2EVO A;  4IKU A;  1M35 A;  2BWW A;  2V3Z A;  2GU5 A;  2Q92 A;  2BB7 A;  4FUK A;  2Q94 A;  3IU7 A;  2GGC A;  4FO7 A;  5D6F A;  4U6E A;  3ROR A;  1WL9 A;  2BHA A;  4B28 A;  2HOW A;  2B3L A;  2Q93 A;  1WKM A;  2GA2 A;  4IKS A;  1YW7 A;  2BWU A;  1W7V A;  2IW2 A;  2GG3 A;  4OOK A;  1O0X A;  4RGZ 1;  1Y1N A;  1YW9 A;  3FMR A;  1WLR A;  5JFR A;  4FLJ A;  1XGM A;  4HXX A;  2NQ6 A;  2B3K A;  4U71 A;  4A6W A;  1C23 A;  4S01 A;  5CDL A;  2P9A A;  3IU9 A;  2GG9 A;  4FKC A;  2V3Y A;  1KQ9 A;  1XGS A;  1WBQ A;  3BIP A;  1XGN A;  4FO8 A;  2BWT A;  3IU8 A;  4A6V A;  4ZWP A;  3IG4 A;  1C27 A;  3CB5 A;  2BWX A;  1YVM A;  1XGO A;  2EA2 A;  2GG7 A;  1R58 A;  4ZNG A;  1MAT A;  2GG8 A;  3MX6 A;  5JI6 A;  5FCH A;  1A16 A;  1WN1 A;  3BIT A;  3FMQ A;  1W2M A;  4FLK A;  2BH3 A;  3L24 A;  3PKE A;  3PKA A;  1PV9 A;  2GU6 A;  2G6P A;  1R5H A;  2GU7 A;  1N51 A;  4U1B A;  1XNZ A;  2OKN A;  3L7G A;  1KQ0 A;  4IPA A;  1YW8 A;  1B59 A;  2EVC A;  4IKR A;  5JHU A;  1QXW A;  4S2R P;  5CLS A;  2NQ7 A;  2EA4 A;  4U70 A;  4IDY A;  2BHB A;  4S2T P;  4PNC A;  4U6J A;  1BN5 A;  2GTX A;  5FCF A;  4IU6 A;  1C22 A;  1JAW A;  3BIQ A;  4FLI A;  2GGB A;  3CTZ A;  3D27 A;  4IF7 A;  3S6B A;  3TAV A;  5D6E A;  3PKB A;  1QZY A;  1C21 A;  4U6C A;  4FLL A;  2BHD A;  2GG2 A;  2OAZ A;  4IEC A;  2BWY A;  1CHM A;  2BN7 A;  2GG0 A;  4QR8 A;  3MAT A;  4U75 A;  1YJ3 A;  4U6W A;  4MAT A;  4ZWU A;  1KP0 A;  1WL6 A;  3PKC A;  2GU4 A;  2BWV A;  3CB6 A;  4RZZ A;  2B3H A;  3FM3 A;  2P99 A;  4U73 A;  2V6C A;  2BHC A;  5CE6 A;  5CDE A;  2V3X A;  4KM3 A;  1QXZ A;  2Q95 A;  5CDV A;  2ZSG A;  4U69 A;  5CIK A;  1R5G A;  1WY2 A;  5CNX A;  2P98 A;  5E5B A;  4U6Z A;  3PKD A;  2GG5 A;  4R60 A;  4PV4 A;  2Q8K A;  1QXY A;  2MAT A;  3RVA A;  4S00 A;  2GZ5 A;  4EGE A;  2Q96 A;  2DFI A;  4JUQ A;  1B6A A;  1C24 A;  4IKT A;  2ADU A;  4ZWO A;  2BWS A;  4RZY A;  4U76 A; 
#chains in the Genus database with same CATH topology
 2EVM A;  3TB5 A;  3Q6D A;  4Z7M A;  3MR1 A;  1BOA A;  2EVO A;  4IKU A;  1M35 A;  2BWW A;  2V3Z A;  2GU5 A;  2Q92 A;  2BB7 A;  4FUK A;  2Q94 A;  3IU7 A;  2GGC A;  4FO7 A;  5D6F A;  4U6E A;  3ROR A;  1WL9 A;  2BHA A;  4B28 A;  2HOW A;  2B3L A;  2Q93 A;  1WKM A;  2GA2 A;  4IKS A;  1YW7 A;  2BWU A;  1W7V A;  2IW2 A;  2GG3 A;  4OOK A;  1O0X A;  4RGZ 1;  1Y1N A;  1YW9 A;  3FMR A;  1WLR A;  5JFR A;  4FLJ A;  1XGM A;  4HXX A;  2NQ6 A;  2B3K A;  4U71 A;  4A6W A;  1C23 A;  4S01 A;  5CDL A;  2P9A A;  3IU9 A;  2GG9 A;  4FKC A;  2V3Y A;  1KQ9 A;  1XGS A;  1WBQ A;  3BIP A;  1XGN A;  4FO8 A;  2BWT A;  3IU8 A;  4A6V A;  4ZWP A;  3IG4 A;  1C27 A;  3CB5 A;  2BWX A;  1YVM A;  1XGO A;  2EA2 A;  2GG7 A;  1R58 A;  4ZNG A;  1MAT A;  2GG8 A;  3MX6 A;  5JI6 A;  5FCH A;  1A16 A;  1WN1 A;  3BIT A;  3FMQ A;  1W2M A;  4FLK A;  2BH3 A;  3L24 A;  3PKE A;  3PKA A;  1PV9 A;  2GU6 A;  2G6P A;  1R5H A;  2GU7 A;  1N51 A;  4U1B A;  1XNZ A;  2OKN A;  3L7G A;  1KQ0 A;  4IPA A;  1YW8 A;  1B59 A;  2EVC A;  4IKR A;  5JHU A;  1QXW A;  4S2R P;  5CLS A;  2NQ7 A;  2EA4 A;  4U70 A;  4IDY A;  2BHB A;  4S2T P;  4PNC A;  4U6J A;  1BN5 A;  2GTX A;  5FCF A;  4IU6 A;  1C22 A;  1JAW A;  3BIQ A;  4FLI A;  2GGB A;  3CTZ A;  3D27 A;  4IF7 A;  3S6B A;  3TAV A;  5D6E A;  3PKB A;  1QZY A;  1C21 A;  4U6C A;  4FLL A;  2BHD A;  2GG2 A;  2OAZ A;  4IEC A;  2BWY A;  1CHM A;  2BN7 A;  2GG0 A;  4QR8 A;  3MAT A;  4U75 A;  1YJ3 A;  4U6W A;  4MAT A;  4ZWU A;  1KP0 A;  1WL6 A;  3PKC A;  2GU4 A;  2BWV A;  3CB6 A;  4RZZ A;  2B3H A;  3FM3 A;  2P99 A;  4U73 A;  2V6C A;  2BHC A;  5CE6 A;  5CDE A;  2V3X A;  4KM3 A;  1QXZ A;  2Q95 A;  5CDV A;  2ZSG A;  4U69 A;  5CIK A;  1R5G A;  1WY2 A;  5CNX A;  2P98 A;  5E5B A;  4U6Z A;  3PKD A;  2GG5 A;  4R60 A;  4PV4 A;  2Q8K A;  1QXY A;  2MAT A;  3RVA A;  4S00 A;  2GZ5 A;  4EGE A;  2Q96 A;  2DFI A;  4JUQ A;  1B6A A;  1C24 A;  4IKT A;  2ADU A;  4ZWO A;  2BWS A;  4RZY A;  4U76 A; 
#chains in the Genus database with same CATH homology
 2EVM A;  3TB5 A;  3Q6D A;  4Z7M A;  3MR1 A;  1BOA A;  2EVO A;  4IKU A;  1M35 A;  2BWW A;  2V3Z A;  2GU5 A;  2Q92 A;  2BB7 A;  4FUK A;  2Q94 A;  3IU7 A;  2GGC A;  4FO7 A;  5D6F A;  4U6E A;  3ROR A;  1WL9 A;  2BHA A;  4B28 A;  2HOW A;  2B3L A;  2Q93 A;  1WKM A;  2GA2 A;  4IKS A;  1YW7 A;  2BWU A;  1W7V A;  2IW2 A;  2GG3 A;  4OOK A;  1O0X A;  4RGZ 1;  1Y1N A;  1YW9 A;  3FMR A;  1WLR A;  5JFR A;  4FLJ A;  1XGM A;  4HXX A;  2NQ6 A;  2B3K A;  4U71 A;  4A6W A;  1C23 A;  4S01 A;  5CDL A;  2P9A A;  3IU9 A;  2GG9 A;  4FKC A;  2V3Y A;  1KQ9 A;  1XGS A;  1WBQ A;  3BIP A;  1XGN A;  4FO8 A;  2BWT A;  3IU8 A;  4A6V A;  4ZWP A;  3IG4 A;  1C27 A;  3CB5 A;  2BWX A;  1YVM A;  1XGO A;  2EA2 A;  2GG7 A;  1R58 A;  4ZNG A;  1MAT A;  2GG8 A;  3MX6 A;  5JI6 A;  5FCH A;  1A16 A;  1WN1 A;  3BIT A;  3FMQ A;  1W2M A;  4FLK A;  2BH3 A;  3L24 A;  3PKE A;  3PKA A;  1PV9 A;  2GU6 A;  2G6P A;  1R5H A;  2GU7 A;  1N51 A;  4U1B A;  1XNZ A;  2OKN A;  3L7G A;  1KQ0 A;  4IPA A;  1YW8 A;  1B59 A;  2EVC A;  4IKR A;  5JHU A;  1QXW A;  4S2R P;  5CLS A;  2NQ7 A;  2EA4 A;  4U70 A;  4IDY A;  2BHB A;  4S2T P;  4PNC A;  4U6J A;  1BN5 A;  2GTX A;  5FCF A;  4IU6 A;  1C22 A;  1JAW A;  3BIQ A;  4FLI A;  2GGB A;  3CTZ A;  3D27 A;  4IF7 A;  3S6B A;  3TAV A;  5D6E A;  3PKB A;  1QZY A;  1C21 A;  4U6C A;  4FLL A;  2BHD A;  2GG2 A;  2OAZ A;  4IEC A;  2BWY A;  1CHM A;  2BN7 A;  2GG0 A;  4QR8 A;  3MAT A;  4U75 A;  1YJ3 A;  4U6W A;  4MAT A;  4ZWU A;  1KP0 A;  1WL6 A;  3PKC A;  2GU4 A;  2BWV A;  3CB6 A;  4RZZ A;  2B3H A;  3FM3 A;  2P99 A;  4U73 A;  2V6C A;  2BHC A;  5CE6 A;  5CDE A;  2V3X A;  4KM3 A;  1QXZ A;  2Q95 A;  5CDV A;  2ZSG A;  4U69 A;  5CIK A;  1R5G A;  1WY2 A;  5CNX A;  2P98 A;  5E5B A;  4U6Z A;  3PKD A;  2GG5 A;  4R60 A;  4PV4 A;  2Q8K A;  1QXY A;  2MAT A;  3RVA A;  4S00 A;  2GZ5 A;  4EGE A;  2Q96 A;  2DFI A;  4JUQ A;  1B6A A;  1C24 A;  4IKT A;  2ADU A;  4ZWO A;  2BWS A;  4RZY A;  4U76 A;
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...
How to cite