3THHA

Crystal structure of the co2+2-hai-abh complex
Total Genus 112
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
112
sequence length
314
structure length
314
Chain Sequence
RTIGIIGAPFSKGQPRGGVEEGPTVLRKAGLLEKLKEQECDVKDYGDLPFADIPNDSPFQIVKNPRSVGKASEQLAGKVAEVKKNGRISLVLGGDHSLAIGSISGHARVHPDLGVIWVDAHTDINTPLTTTSGNLHGQPVSFLLKELKGKIPDVPGFSWVTPCISAKDIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLLGRKKRPIHLSFDVDGLDPSFTPATGTPVVGGLTYREGLYITEEIYKTGLLSGLDIMEVNPSLGKTPEEVTRTVNTAVAITLACFGLAREGNHKPIDYLN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Arginase-1
publication title Crystal structures of complexes with cobalt-reconstituted human arginase I.
pubmed doi rcsb
source organism Homo sapiens
total genus 112
structure length 314
sequence length 314
chains with identical sequence B
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 2011-08-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 3thhA00
4GSZA 1WOIA 1WVBA 1WOHA 3E6VA 1HQ5A 3MMRA 4MYKA 4Q40A 1T5FA 1WOGA 3LHLA 1XFKA 3PZLA 3M1RA 5RLAA 4MXRA 2A0MA 4G3HA 4Q3TA 3KV2A 4FCKA 3MFVA 3MFWA 1T5GA 4IXVA 3NIQA 3LP7A 4IXUA 3TH7A 4IU5A 5HJAA 3E8QA 3E9BA 3GN0A 4Q3UA 4MYLA 4GWDA 4RLAA 1T4TA 3CEVA 3LP4A 4ITYA 3F80A 1P8MA 4IU4A 4RHQA 4MYNA 2EF4A 4RHIA 1P8PA 4RHJA 5CEVA 4RHLA 4HWWA 2RLAA 4Q41A 4GSMA 4I06A 4GSVA 4IU1A 3E6KA 4Q3PA 2PHAA 3TF3A 3MJLA 1P8OA 4IE2A 3DJ8A 1P8NA 4Q3VA 4RHKA 4HZEA 1HQXA 2AEBA 1ZPGA 3RLAA 1CEVA 1GQ7A 4IE1A 4MYFA 4GWCA 1PQ3A 2ZAVA 2PHOA 4Q3RC 1TA1A 3SJTA 1RLAA 4CEVA 3SKKA 4DZ4A 4IU0A 1ZPEA 3SL0A 4HXQA 1T4RA 3NIOA 3THJA 1GQ6A 1TBHA 3E8ZA 4Q3SA 3GMZA 4Q42A 3SL1A 4Q3RA 1HQGA 1P8QA 1TBLA 2EIVA 1TBJA 2CEVA 1P8RA 4Q3QA 4IE3A 2EF5A 4FCIA 3THEA 1HQHA 1WVAA 3NIPA 1D3VA 1T4SA 1R1OA 3THHA 2PLLA 4RHMA 1P8SA 5HJ9A 1HQFA 1T4PA
chains in the Genus database with same CATH superfamily
4GSZA 5EFGA 1WOIA 1WVBA 1WOHA 3E6VA 5EEKA 1HQ5A 3MMRA 4MYKA 4Q40A 5EFNA 1T5FA 1WOGA 4RN1A 3LHLA 1XFKA 3PZLA 3M1RA 5RLAA 4MXRA 2VQQA 3MZ6A 5G0XA 2A0MA 4G3HA 5A2SA 4Q3TA 5G10A 3KV2A 4FCKA 2VCGA 3MFVA 5DC8A 5HJAA 3MFWA 5THUA 1T5GA 5EEIA 4QA4A 4IXVA 3EWFA 4RN0A 3SFFA 5G17A 4CBTA 3EZPA 3NIQA 4QA1A 3LP7A 4IXUA 1ZZ0A 5G0GA 4IU5A 2VQJA 5G0IA 1VKGA 3E8QA 3SFHA 3E9BA 3GN0A 3TH7A 4Q3UA 2VQVA 4MYLA 4GWDA 5DC7A 5THVA 3ZNRA 3MZ7A 4RLAA 1T4TA 2V5XA 1T64A 3CEVA 5EFJD 4ZURA 5G0YA 3LP4A 4ITYA 5JI5A 3F80A 1P8MA 4IU4A 4RHQA 1W22A 2EF4A 4MYNA 1P8PA 3MENA 4RHIA 4RHJA 2VQMA 3C10A 3Q9BA 5IWGA 4BZ8A 5CEVA 4RHLA 4HWWA 1T69A 2RLAA 4Q41A 4GSMA 4I06A 4GSVA 4IU1A 5D1BA 5D1DA 3E6KA 3Q9FA 4Q3PA 2PHAA 4ZUOA 4ZUNA 3MJLA 3RQDA 1C3SA 1P8OA 4IE2A 5G3WA 3EW8A 3TF3A 3DJ8A 1P8NA 4Q3VA 4RHKA 2VQWG 1C3RA 1HQXA 2AEBA 4HZEA 5BWZA 5THTA 3C0ZA 1ZPGA 4QA0A 5EEMA 3RLAA 5LI3A 3EZTA 5EFHA 4BKXB 5EFKB 5G1CA 1CEVA 5EF7A 1GQ7A 3F07A 4IE1A 3F0RA 4BZ6A 4MYFA 4GWCA 1C3PA 1PQ3A 3MAXA 2ZAVA 2PHOA 5FUEA 4Q3RC 4CQFA 5G11A 1ZZ3A 4QA6A 3Q9CA 5G13A 1TA1A 2VQOA 1RLAA 4ZUPA 3SJTA 5G0JA 3SKKA 4CEVA 4DZ4A 4QA3A 4IU0A 1ZPEA 1T67A 5EENA 4LXZA 3SL0A 4HXQA 2GH6A 1T4RA 3ZNSA 3NIOA 5DC5A 3MZ4A 4BZ7A 5EEFA 5G0HA 3THJA 1GQ6A 1TBHA 3E8ZA 4Q3SA 5D1CA 5G1AA 5EF8A 2V5WA 1ZZ1A 3F06A 3GMZA 4LY1A 4BZ9A 4Q42A 5FCWA 5IX0A 3SL1A 4Q3RA 1HQGA 1P8QA 1TBLA 2EIVA 1TBJA 4ZUMA 2CEVA 1P8RA 3Q9EA 5G1BA 4Q3QA 4IE3A 4QA7A 2EF5A 4FCIA 5THSA 3THEA 3MZ3A 1HQHA 4CBYA 5DC6A 1WVAA 3NIPA 3C0YA 4A69A 4QA2A 1D3VA 1T4SA 5ICNB 1R1OA 3THHA 5EFBD 2PLLA 4RHMA 4BZ5A 4RN2A 5G12A 4ZUQA 1P8SA 4QA5A 5HJ9A 1HQFA 1T4PA
chains in the Genus database with same CATH topology
4GSZA 1WOIA 1WVBA 1WOHA 3E6VA 1HQ5A 3MMRA 4MYKA 4Q40A 1T5FA 1WOGA 3LHLA 1XFKA 3PZLA 3M1RA 5RLAA 4MXRA 2A0MA 4G3HA 4Q3TA 3KV2A 4FCKA 3MFVA 3MFWA 1T5GA 4IXVA 3NIQA 3LP7A 4IXUA 3TH7A 4IU5A 5HJAA 3E8QA 3E9BA 3GN0A 4Q3UA 4MYLA 4GWDA 4RLAA 1T4TA 3CEVA 3LP4A 4ITYA 3F80A 1P8MA 4IU4A 4RHQA 4MYNA 2EF4A 4RHIA 1P8PA 4RHJA 5CEVA 4RHLA 4HWWA 2RLAA 4Q41A 4GSMA 4I06A 4GSVA 4IU1A 3E6KA 4Q3PA 2PHAA 3TF3A 3MJLA 1P8OA 4IE2A 3DJ8A 1P8NA 4Q3VA 4RHKA 4HZEA 1HQXA 2AEBA 1ZPGA 3RLAA 1CEVA 1GQ7A 4IE1A 4MYFA 4GWCA 1PQ3A 2ZAVA 2PHOA 4Q3RC 1TA1A 3SJTA 1RLAA 4CEVA 3SKKA 4DZ4A 4IU0A 1ZPEA 3SL0A 4HXQA 1T4RA 3NIOA 3THJA 1GQ6A 1TBHA 3E8ZA 4Q3SA 3GMZA 4Q42A 3SL1A 4Q3RA 1HQGA 1P8QA 1TBLA 2EIVA 1TBJA 2CEVA 1P8RA 4Q3QA 4IE3A 2EF5A 4FCIA 3THEA 1HQHA 1WVAA 3NIPA 1D3VA 1T4SA 1R1OA 3THHA 2PLLA 4RHMA 1P8SA 5HJ9A 1HQFA 1T4PA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4GSZ A;  1WOI A;  1WVB A;  1WOH A;  3E6V A;  1HQ5 A;  3MMR A;  4MYK A;  4Q40 A;  1T5F A;  1WOG A;  3LHL A;  1XFK A;  3PZL A;  3M1R A;  5RLA A;  4MXR A;  2A0M A;  4G3H A;  4Q3T A;  3KV2 A;  4FCK A;  3MFV A;  3MFW A;  1T5G A;  4IXV A;  3NIQ A;  3LP7 A;  4IXU A;  3TH7 A;  4IU5 A;  5HJA A;  3E8Q A;  3E9B A;  3GN0 A;  4Q3U A;  4MYL A;  4GWD A;  4RLA A;  1T4T A;  3CEV A;  3LP4 A;  4ITY A;  3F80 A;  1P8M A;  4IU4 A;  4RHQ A;  4MYN A;  2EF4 A;  4RHI A;  1P8P A;  4RHJ A;  5CEV A;  4RHL A;  4HWW A;  2RLA A;  4Q41 A;  4GSM A;  4I06 A;  4GSV A;  4IU1 A;  3E6K A;  4Q3P A;  2PHA A;  3TF3 A;  3MJL A;  1P8O A;  4IE2 A;  3DJ8 A;  1P8N A;  4Q3V A;  4RHK A;  4HZE A;  1HQX A;  2AEB A;  1ZPG A;  3RLA A;  1CEV A;  1GQ7 A;  4IE1 A;  4MYF A;  4GWC A;  1PQ3 A;  2ZAV A;  2PHO A;  4Q3R C;  1TA1 A;  3SJT A;  1RLA A;  4CEV A;  3SKK A;  4DZ4 A;  4IU0 A;  1ZPE A;  3SL0 A;  4HXQ A;  1T4R A;  3NIO A;  3THJ A;  1GQ6 A;  1TBH A;  3E8Z A;  4Q3S A;  3GMZ A;  4Q42 A;  3SL1 A;  4Q3R A;  1HQG A;  1P8Q A;  1TBL A;  2EIV A;  1TBJ A;  2CEV A;  1P8R A;  4Q3Q A;  4IE3 A;  2EF5 A;  4FCI A;  3THE A;  1HQH A;  1WVA A;  3NIP A;  1D3V A;  1T4S A;  1R1O A;  3THH A;  2PLL A;  4RHM A;  1P8S A;  5HJ9 A;  1HQF A;  1T4P A; 
#chains in the Genus database with same CATH topology
 4GSZ A;  5EFG A;  1WOI A;  1WVB A;  1WOH A;  3E6V A;  5EEK A;  1HQ5 A;  3MMR A;  4MYK A;  4Q40 A;  5EFN A;  1T5F A;  1WOG A;  4RN1 A;  3LHL A;  1XFK A;  3PZL A;  3M1R A;  5RLA A;  4MXR A;  2VQQ A;  3MZ6 A;  5G0X A;  2A0M A;  4G3H A;  5A2S A;  4Q3T A;  5G10 A;  3KV2 A;  4FCK A;  2VCG A;  3MFV A;  5DC8 A;  5HJA A;  3MFW A;  5THU A;  1T5G A;  5EEI A;  4QA4 A;  4IXV A;  3EWF A;  4RN0 A;  3SFF A;  5G17 A;  4CBT A;  3EZP A;  3NIQ A;  4QA1 A;  3LP7 A;  4IXU A;  1ZZ0 A;  5G0G A;  4IU5 A;  2VQJ A;  5G0I A;  1VKG A;  3E8Q A;  3SFH A;  3E9B A;  3GN0 A;  3TH7 A;  4Q3U A;  2VQV A;  4MYL A;  4GWD A;  5DC7 A;  5THV A;  3ZNR A;  3MZ7 A;  4RLA A;  1T4T A;  2V5X A;  1T64 A;  3CEV A;  5EFJ D;  4ZUR A;  5G0Y A;  3LP4 A;  4ITY A;  5JI5 A;  3F80 A;  1P8M A;  4IU4 A;  4RHQ A;  1W22 A;  2EF4 A;  4MYN A;  1P8P A;  3MEN A;  4RHI A;  4RHJ A;  2VQM A;  3C10 A;  3Q9B A;  5IWG A;  4BZ8 A;  5CEV A;  4RHL A;  4HWW A;  1T69 A;  2RLA A;  4Q41 A;  4GSM A;  4I06 A;  4GSV A;  4IU1 A;  5D1B A;  5D1D A;  3E6K A;  3Q9F A;  4Q3P A;  2PHA A;  4ZUO A;  4ZUN A;  3MJL A;  3RQD A;  1C3S A;  1P8O A;  4IE2 A;  5G3W A;  3EW8 A;  3TF3 A;  3DJ8 A;  1P8N A;  4Q3V A;  4RHK A;  2VQW G;  1C3R A;  1HQX A;  2AEB A;  4HZE A;  5BWZ A;  5THT A;  3C0Z A;  1ZPG A;  4QA0 A;  5EEM A;  3RLA A;  5LI3 A;  3EZT A;  5EFH A;  4BKX B;  5EFK B;  5G1C A;  1CEV A;  5EF7 A;  1GQ7 A;  3F07 A;  4IE1 A;  3F0R A;  4BZ6 A;  4MYF A;  4GWC A;  1C3P A;  1PQ3 A;  3MAX A;  2ZAV A;  2PHO A;  5FUE A;  4Q3R C;  4CQF A;  5G11 A;  1ZZ3 A;  4QA6 A;  3Q9C A;  5G13 A;  1TA1 A;  2VQO A;  1RLA A;  4ZUP A;  3SJT A;  5G0J A;  3SKK A;  4CEV A;  4DZ4 A;  4QA3 A;  4IU0 A;  1ZPE A;  1T67 A;  5EEN A;  4LXZ A;  3SL0 A;  4HXQ A;  2GH6 A;  1T4R A;  3ZNS A;  3NIO A;  5DC5 A;  3MZ4 A;  4BZ7 A;  5EEF A;  5G0H A;  3THJ A;  1GQ6 A;  1TBH A;  3E8Z A;  4Q3S A;  5D1C A;  5G1A A;  5EF8 A;  2V5W A;  1ZZ1 A;  3F06 A;  3GMZ A;  4LY1 A;  4BZ9 A;  4Q42 A;  5FCW A;  5IX0 A;  3SL1 A;  4Q3R A;  1HQG A;  1P8Q A;  1TBL A;  2EIV A;  1TBJ A;  4ZUM A;  2CEV A;  1P8R A;  3Q9E A;  5G1B A;  4Q3Q A;  4IE3 A;  4QA7 A;  2EF5 A;  4FCI A;  5THS A;  3THE A;  3MZ3 A;  1HQH A;  4CBY A;  5DC6 A;  1WVA A;  3NIP A;  3C0Y A;  4A69 A;  4QA2 A;  1D3V A;  1T4S A;  5ICN B;  1R1O A;  3THH A;  5EFB D;  2PLL A;  4RHM A;  4BZ5 A;  4RN2 A;  5G12 A;  4ZUQ A;  1P8S A;  4QA5 A;  5HJ9 A;  1HQF A;  1T4P A; 
#chains in the Genus database with same CATH homology
 4GSZ A;  1WOI A;  1WVB A;  1WOH A;  3E6V A;  1HQ5 A;  3MMR A;  4MYK A;  4Q40 A;  1T5F A;  1WOG A;  3LHL A;  1XFK A;  3PZL A;  3M1R A;  5RLA A;  4MXR A;  2A0M A;  4G3H A;  4Q3T A;  3KV2 A;  4FCK A;  3MFV A;  3MFW A;  1T5G A;  4IXV A;  3NIQ A;  3LP7 A;  4IXU A;  3TH7 A;  4IU5 A;  5HJA A;  3E8Q A;  3E9B A;  3GN0 A;  4Q3U A;  4MYL A;  4GWD A;  4RLA A;  1T4T A;  3CEV A;  3LP4 A;  4ITY A;  3F80 A;  1P8M A;  4IU4 A;  4RHQ A;  4MYN A;  2EF4 A;  4RHI A;  1P8P A;  4RHJ A;  5CEV A;  4RHL A;  4HWW A;  2RLA A;  4Q41 A;  4GSM A;  4I06 A;  4GSV A;  4IU1 A;  3E6K A;  4Q3P A;  2PHA A;  3TF3 A;  3MJL A;  1P8O A;  4IE2 A;  3DJ8 A;  1P8N A;  4Q3V A;  4RHK A;  4HZE A;  1HQX A;  2AEB A;  1ZPG A;  3RLA A;  1CEV A;  1GQ7 A;  4IE1 A;  4MYF A;  4GWC A;  1PQ3 A;  2ZAV A;  2PHO A;  4Q3R C;  1TA1 A;  3SJT A;  1RLA A;  4CEV A;  3SKK A;  4DZ4 A;  4IU0 A;  1ZPE A;  3SL0 A;  4HXQ A;  1T4R A;  3NIO A;  3THJ A;  1GQ6 A;  1TBH A;  3E8Z A;  4Q3S A;  3GMZ A;  4Q42 A;  3SL1 A;  4Q3R A;  1HQG A;  1P8Q A;  1TBL A;  2EIV A;  1TBJ A;  2CEV A;  1P8R A;  4Q3Q A;  4IE3 A;  2EF5 A;  4FCI A;  3THE A;  1HQH A;  1WVA A;  3NIP A;  1D3V A;  1T4S A;  1R1O A;  3THH A;  2PLL A;  4RHM A;  1P8S A;  5HJ9 A;  1HQF A;  1T4P A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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