3UGLA

Structural and functional characterization of an anesthetic binding site in the second cysteine-rich domain of protein kinase c delta
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
65
structure length
65
Chain Sequence
GSRRASVGSHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCEFIVTD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Metal binding protein
molecule keywords Proteine kinase C delta type
publication title Structural and Functional Characterization of an Anesthetic Binding Site in the Second Cysteine-Rich Domain of Protein Kinase Cdelta
pubmed doi rcsb
source organism Mus musculus
total genus 11
structure length 65
sequence length 65
chains with identical sequence B
ec nomenclature ec 2.7.10.2: Non-specific protein-tyrosine kinase.
pdb deposition date 2011-11-02
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 3uglA01
2ORVA 4L9MA 4UXJA 2YUUA 1TBNA 3UGLA 2J9RA 2WVJA 3UGIA 2FNFX 2ROWA 1KBEA 3BJIA 3E2IA 5FUVA 3UEYA 2ENZA 2ORWA 3CXLA 1XX6A 2VRWB 1R79A 3UEJA 1TBOA 2ENNA 3UFFA 1PTQA 2J87A 1PTRA 2QQ0A 5FUWA 1W4RA 2GVIA 2QQEA 4UXHA 1FARA 4UXIA 5FUXA 3UGDA 1XBTA 5FUYA 2E73A 3KY9A 2ELIA 2UZ3A 1XA6A 2JA1A 1RFHA 1FAQA 2B8TA 4FKDA 2DB6A 1Y8FA 1KBFA 2QPOA 4B6DA
chains in the Genus database with same CATH superfamily
4UXJA 3QTLD 3UGLA 1V1IA 2DKVA 1Y1CA 2FNFX 1UVGA 3QAHA 1MT1A 1OVOA 1TOTA 3FC3A 1BMOA 2K9HA 2P6AC 1CGJI 2NU0I 5E3QA 3UEYA 3UEJA 1TBOA 1TURA 2JXDA 1PTQA 2J87A 3TO6A 1K7UA 3TOBA 3FSXA 3HH2C 1NUBA 1Z7KB 1P9GA 1AN1I 1SGNI 5DAEA 2BUSA 2WGCA 1XBTA 3UGDA 1Q9BA 3TO7A 2GKTI 3SGBI 1HDLA 1SGYI 1OYVI 2JA1A 4MPIA 1OMUA 2SGFI 2V53A 2E5RA 2GIVA 1CE3A 1TGSI 4FKDA 4OVOA 1Y8FA 5E3RA 1V1HA 3TO9A 2ERWA 1W3SA 5FUWA 1CSOI 4B6DA 5J8FA 2W0TA 2YUUA 5J8CA 1ULNA 1IY5A 2SGQI 3R5DA 1ULMA 2ROWA 2XRCA 4WP4A 1HPTA 1CT2I 1M8CA 1BUSA 3CXLA 4DNCA 1CT0I 1LR7A 1XX6A 2X3TA 3VDUA 2V1CC 3TOAA 3PDNA 2V1CA 9WGAA 3QWPA 2DIPA 2KMOA 2CJSC 2RC4A 1N13A 1Y1BA 1PTRA 2QQ0A 2LB7A 2N71A 2GVIA 3OL0A 1PJUA 4UXHA 2GKRI 1FARA 3VDPA 4HGUA 2CWFA 2JYYA 1WGCA 1TUSA 2NU3I 5HI7A 1U5KA 3RU0A 2PQ8A 2WCYA 1ULKA 5CCMA 1RFHA 1CT4I 3SEKC 2KMQA 3OXGA 2B8TA 4GI3C 1IW4A 2N52A 4AMLA 1TBQR 3R5AA 1UHAA 3UFFA 2ORVA 1MJAA 2LEOA 2N1AB 1FYBA 2JW6A 2WVJA 3UGIA 5EX0A 4SGBI 2A20A 3UOEA 2NU4I 1KBEA 3BJIA 3B4VC 3E2IA 1SGDI 2GKVA 2ORWA 4A24A 1R0RI 1SGQI 1SGEI 2OD1A 3VE5A 2SGPI 1WGTA 2JZMA 2UVOA 2OZUA 1M8BA 1W4RA 1WTJA 2QQEA 2M5XA 1KBFA 5FUXA 1PPFI 1TBRR 2QQDA 1HEVA 1MJ9A 2X52A 5FUYA 1K7TA 3KY9A 3GOXA 2F3CI 1XA6A 1CGII 5HQ8A 1P9ZA 2L7XA 2OU2A 1MJBA 2DB6A 5EX3A 2QPOA 2ARPF 2B0UC 1CHOI 4L9MA 3TJQA 1TBNA 1X74A 1S20A 1FY7A 1PCEA 2J9RA 2OVOA 3FSYA 1NXUA 2CWHA 4E1RA 1KMAA 2N17A 2RIJA 3OXFA 3R5BA 5CCLA 1IY6A 3OVOA 3SGQI 1LR8A 1SGPI 2Y0MA 1DS2I 1DS3I 1UVFA 1LR9A 2CWGA 2ENZA 5FUVA 4JCVE 4E1PA 5E3PA 2VRWB 1R79A 1K7VA 3OXLA 2ENNA 1YU6C 3R5CA 3E59A 1HJAI 2KMPA 7WGAA 1H0ZA 1OMTA 2KMRA 2SGEI 2LUYA 2YQPA 4UXIA 3MEKA 2ODDA 2E73A 1YTPA 2L8EA 3D00A 1WKXA 2ELIA 2SGDI 2UZ3A 2QQCA 1X4SA 1Z2IA 5JHWC 1TIHA 2NU1I 2NU2I 1FAQA 1SGRI 1VDDA 2KCXA 1UUCA
chains in the Genus database with same CATH topology
4UXJA 3QTLD 3UGLA 1V1IA 1Y1CA 2FNFX 1UVGA 1MT1A 1OVOA 1TOTA 3FC3A 1BMOA 2K9HA 2P6AC 1CGJI 2NU0I 3UEYA 3UEJA 1TBOA 1TURA 2JXDA 1PTQA 2J87A 3HH2C 1NUBA 1Z7KB 1AN1I 1SGNI 5DAEA 2BUSA 3UGDA 1XBTA 2GKTI 3SGBI 1HDLA 1SGYI 1OYVI 2JA1A 1OMUA 2SGFI 2V53A 2E5RA 1CE3A 1TGSI 4FKDA 4OVOA 1Y8FA 1V1HA 2ERWA 1W3SA 5FUWA 1CSOI 4B6DA 2W0TA 2YUUA 1IY5A 2SGQI 2ROWA 2XRCA 1HPTA 1CT2I 1M8CA 1BUSA 3CXLA 1CT0I 1LR7A 1XX6A 3VDUA 2V1CC 3PDNA 2V1CA 3QWPA 2DIPA 2KMOA 2CJSC 1N13A 1Y1BA 1PTRA 2QQ0A 2N71A 2GVIA 3OL0A 1PJUA 4UXHA 2GKRI 1FARA 3VDPA 4HGUA 2JYYA 1TUSA 2NU3I 5HI7A 1U5KA 3RU0A 2WCYA 5CCMA 1RFHA 1CT4I 3SEKC 2KMQA 3OXGA 2B8TA 4GI3C 1IW4A 2N52A 1KBFA 1TBQR 3UFFA 2ORVA 2LEOA 2N1AB 1FYBA 2JW6A 2WVJA 3UGIA 5EX0A 4SGBI 2A20A 2NU4I 1KBEA 3BJIA 3B4VC 3E2IA 1SGDI 2GKVA 2ORWA 4A24A 1R0RI 1SGQI 1SGEI 2OD1A 3VE5A 2SGPI 2JZMA 1M8BA 1W4RA 2QQEA 2M5XA 5FUXA 1PPFI 1TBRR 2QQDA 5FUYA 3KY9A 3GOXA 2F3CI 1XA6A 1CGII 5HQ8A 2L7XA 2DB6A 5EX3A 2QPOA 2ARPF 2B0UC 1CHOI 4L9MA 3TJQA 1TBNA 1X74A 1PCEA 2J9RA 2OVOA 4E1RA 1KMAA 2N17A 3OXFA 1IY6A 5CCLA 3OVOA 3SGQI 1LR8A 1SGPI 1DS2I 1DS3I 1UVFA 1LR9A 2ENZA 5FUVA 4E1PA 4JCVE 2VRWB 1R79A 3OXLA 2ENNA 1YU6C 3E59A 1HJAI 2KMPA 1H0ZA 1OMTA 2KMRA 2SGEI 2LUYA 2YQPA 4UXIA 3MEKA 2ODDA 2E73A 1YTPA 2L8EA 3D00A 2ELIA 2SGDI 2UZ3A 2QQCA 1X4SA 5JHWC 1TIHA 2NU1I 2NU2I 1FAQA 1SGRI 1VDDA 2KCXA 1UUCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ORV A;  4L9M A;  4UXJ A;  2YUU A;  1TBN A;  3UGL A;  2J9R A;  2WVJ A;  3UGI A;  2FNF X;  2ROW A;  1KBE A;  3BJI A;  3E2I A;  5FUV A;  3UEY A;  2ENZ A;  2ORW A;  3CXL A;  1XX6 A;  2VRW B;  1R79 A;  3UEJ A;  1TBO A;  2ENN A;  3UFF A;  1PTQ A;  2J87 A;  1PTR A;  2QQ0 A;  5FUW A;  1W4R A;  2GVI A;  2QQE A;  4UXH A;  1FAR A;  4UXI A;  5FUX A;  3UGD A;  1XBT A;  5FUY A;  2E73 A;  3KY9 A;  2ELI A;  2UZ3 A;  1XA6 A;  2JA1 A;  1RFH A;  1FAQ A;  2B8T A;  4FKD A;  2DB6 A;  1Y8F A;  1KBF A;  2QPO A;  4B6D A; 
#chains in the Genus database with same CATH topology
 4UXJ A;  3QTL D;  3UGL A;  1V1I A;  2DKV A;  1Y1C A;  2FNF X;  1UVG A;  3QAH A;  1MT1 A;  1OVO A;  1TOT A;  3FC3 A;  1BMO A;  2K9H A;  2P6A C;  1CGJ I;  2NU0 I;  5E3Q A;  3UEY A;  3UEJ A;  1TBO A;  1TUR A;  2JXD A;  1PTQ A;  2J87 A;  3TO6 A;  1K7U A;  3TOB A;  3FSX A;  3HH2 C;  1NUB A;  1Z7K B;  1P9G A;  1AN1 I;  1SGN I;  5DAE A;  2BUS A;  2WGC A;  1XBT A;  3UGD A;  1Q9B A;  3TO7 A;  2GKT I;  3SGB I;  1HDL A;  1SGY I;  1OYV I;  2JA1 A;  4MPI A;  1OMU A;  2SGF I;  2V53 A;  2E5R A;  2GIV A;  1CE3 A;  1TGS I;  4FKD A;  4OVO A;  1Y8F A;  5E3R A;  1V1H A;  3TO9 A;  2ERW A;  1W3S A;  5FUW A;  1CSO I;  4B6D A;  5J8F A;  2W0T A;  2YUU A;  5J8C A;  1ULN A;  1IY5 A;  2SGQ I;  3R5D A;  1ULM A;  2ROW A;  2XRC A;  4WP4 A;  1HPT A;  1CT2 I;  1M8C A;  1BUS A;  3CXL A;  4DNC A;  1CT0 I;  1LR7 A;  1XX6 A;  2X3T A;  3VDU A;  2V1C C;  3TOA A;  3PDN A;  2V1C A;  9WGA A;  3QWP A;  2DIP A;  2KMO A;  2CJS C;  2RC4 A;  1N13 A;  1Y1B A;  1PTR A;  2QQ0 A;  2LB7 A;  2N71 A;  2GVI A;  3OL0 A;  1PJU A;  4UXH A;  2GKR I;  1FAR A;  3VDP A;  4HGU A;  2CWF A;  2JYY A;  1WGC A;  1TUS A;  2NU3 I;  5HI7 A;  1U5K A;  3RU0 A;  2PQ8 A;  2WCY A;  1ULK A;  5CCM A;  1RFH A;  1CT4 I;  3SEK C;  2KMQ A;  3OXG A;  2B8T A;  4GI3 C;  1IW4 A;  2N52 A;  4AML A;  1TBQ R;  3R5A A;  1UHA A;  3UFF A;  2ORV A;  1MJA A;  2LEO A;  2N1A B;  1FYB A;  2JW6 A;  2WVJ A;  3UGI A;  5EX0 A;  4SGB I;  2A20 A;  3UOE A;  2NU4 I;  1KBE A;  3BJI A;  3B4V C;  3E2I A;  1SGD I;  2GKV A;  2ORW A;  4A24 A;  1R0R I;  1SGQ I;  1SGE I;  2OD1 A;  3VE5 A;  2SGP I;  1WGT A;  2JZM A;  2UVO A;  2OZU A;  1M8B A;  1W4R A;  1WTJ A;  2QQE A;  2M5X A;  1KBF A;  5FUX A;  1PPF I;  1TBR R;  2QQD A;  1HEV A;  1MJ9 A;  2X52 A;  5FUY A;  1K7T A;  3KY9 A;  3GOX A;  2F3C I;  1XA6 A;  1CGI I;  5HQ8 A;  1P9Z A;  2L7X A;  2OU2 A;  1MJB A;  2DB6 A;  5EX3 A;  2QPO A;  2ARP F;  2B0U C;  1CHO I;  4L9M A;  3TJQ A;  1TBN A;  1X74 A;  1S20 A;  1FY7 A;  1PCE A;  2J9R A;  2OVO A;  3FSY A;  1NXU A;  2CWH A;  4E1R A;  1KMA A;  2N17 A;  2RIJ A;  3OXF A;  3R5B A;  5CCL A;  1IY6 A;  3OVO A;  3SGQ I;  1LR8 A;  1SGP I;  2Y0M A;  1DS2 I;  1DS3 I;  1UVF A;  1LR9 A;  2CWG A;  2ENZ A;  5FUV A;  4JCV E;  4E1P A;  5E3P A;  2VRW B;  1R79 A;  1K7V A;  3OXL A;  2ENN A;  1YU6 C;  3R5C A;  3E59 A;  1HJA I;  2KMP A;  7WGA A;  1H0Z A;  1OMT A;  2KMR A;  2SGE I;  2LUY A;  2YQP A;  4UXI A;  3MEK A;  2ODD A;  2E73 A;  1YTP A;  2L8E A;  3D00 A;  1WKX A;  2ELI A;  2SGD I;  2UZ3 A;  2QQC A;  1X4S A;  1Z2I A;  5JHW C;  1TIH A;  2NU1 I;  2NU2 I;  1FAQ A;  1SGR I;  1VDD A;  2KCX A;  1UUC A; 
#chains in the Genus database with same CATH homology
 4UXJ A;  3QTL D;  3UGL A;  1V1I A;  1Y1C A;  2FNF X;  1UVG A;  1MT1 A;  1OVO A;  1TOT A;  3FC3 A;  1BMO A;  2K9H A;  2P6A C;  1CGJ I;  2NU0 I;  3UEY A;  3UEJ A;  1TBO A;  1TUR A;  2JXD A;  1PTQ A;  2J87 A;  3HH2 C;  1NUB A;  1Z7K B;  1AN1 I;  1SGN I;  5DAE A;  2BUS A;  3UGD A;  1XBT A;  2GKT I;  3SGB I;  1HDL A;  1SGY I;  1OYV I;  2JA1 A;  1OMU A;  2SGF I;  2V53 A;  2E5R A;  1CE3 A;  1TGS I;  4FKD A;  4OVO A;  1Y8F A;  1V1H A;  2ERW A;  1W3S A;  5FUW A;  1CSO I;  4B6D A;  2W0T A;  2YUU A;  1IY5 A;  2SGQ I;  2ROW A;  2XRC A;  1HPT A;  1CT2 I;  1M8C A;  1BUS A;  3CXL A;  1CT0 I;  1LR7 A;  1XX6 A;  3VDU A;  2V1C C;  3PDN A;  2V1C A;  3QWP A;  2DIP A;  2KMO A;  2CJS C;  1N13 A;  1Y1B A;  1PTR A;  2QQ0 A;  2N71 A;  2GVI A;  3OL0 A;  1PJU A;  4UXH A;  2GKR I;  1FAR A;  3VDP A;  4HGU A;  2JYY A;  1TUS A;  2NU3 I;  5HI7 A;  1U5K A;  3RU0 A;  2WCY A;  5CCM A;  1RFH A;  1CT4 I;  3SEK C;  2KMQ A;  3OXG A;  2B8T A;  4GI3 C;  1IW4 A;  2N52 A;  1KBF A;  1TBQ R;  3UFF A;  2ORV A;  2LEO A;  2N1A B;  1FYB A;  2JW6 A;  2WVJ A;  3UGI A;  5EX0 A;  4SGB I;  2A20 A;  2NU4 I;  1KBE A;  3BJI A;  3B4V C;  3E2I A;  1SGD I;  2GKV A;  2ORW A;  4A24 A;  1R0R I;  1SGQ I;  1SGE I;  2OD1 A;  3VE5 A;  2SGP I;  2JZM A;  1M8B A;  1W4R A;  2QQE A;  2M5X A;  5FUX A;  1PPF I;  1TBR R;  2QQD A;  5FUY A;  3KY9 A;  3GOX A;  2F3C I;  1XA6 A;  1CGI I;  5HQ8 A;  2L7X A;  2DB6 A;  5EX3 A;  2QPO A;  2ARP F;  2B0U C;  1CHO I;  4L9M A;  3TJQ A;  1TBN A;  1X74 A;  1PCE A;  2J9R A;  2OVO A;  4E1R A;  1KMA A;  2N17 A;  3OXF A;  1IY6 A;  5CCL A;  3OVO A;  3SGQ I;  1LR8 A;  1SGP I;  1DS2 I;  1DS3 I;  1UVF A;  1LR9 A;  2ENZ A;  5FUV A;  4E1P A;  4JCV E;  2VRW B;  1R79 A;  3OXL A;  2ENN A;  1YU6 C;  3E59 A;  1HJA I;  2KMP A;  1H0Z A;  1OMT A;  2KMR A;  2SGE I;  2LUY A;  2YQP A;  4UXI A;  3MEK A;  2ODD A;  2E73 A;  1YTP A;  2L8E A;  3D00 A;  2ELI A;  2SGD I;  2UZ3 A;  2QQC A;  1X4S A;  5JHW C;  1TIH A;  2NU1 I;  2NU2 I;  1FAQ A;  1SGR I;  1VDD A;  2KCX A;  1UUC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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