3W0IC

Crystal structure of rat vdr ligand binding domain in complex with novel nonsecosteroidal ligands
Total Genus 2
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
2
sequence length
12
structure length
12
Chain Sequence
KNHPMLMNLLKD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transcription
molecule keywords Vitamin D3 Receptor
publication title Structural basis for vitamin D receptor agonism by novel non-secosteroidal ligands.
pubmed doi rcsb
source organism Rattus norvegicus
total genus 2
structure length 12
sequence length 12
ec nomenclature
pdb deposition date 2012-10-30
Image from the rcsb pdb (www.rcsb.org)
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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